RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000161533

Ensembl transcript IDs: ENST00000293217.10, ENST00000301608.8, ENST00000572047.5, ENST00000573078.5, ENST00000576743.1, ENST00000587927.5, ENST00000588176.5, ENST00000588968.5, ENST00000589301.1, ENST00000589744.1, ENST00000591857.5, ENST00000592329.1

Found 611 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGTTCCAGGCGGGCATGAAGAAGCGCTCCTGCTGCTCCGCAGTTaGCTGGTGAAGCAAGGTGGGCAGGAACATGCCCAAGTGAAGATC +
Preference number: 1 (lower is better)
Translates to: QVPGGHEEALLLLRS*LVKQGGQEHAQVKI
Trigger: GATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAGGAGCGCTTCTTCATGCCCGCCTGGAACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR CCA 90 bp CCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTTTC +
Preference number: 1 (lower is better)
Translates to: PWLARLLPAVAGCAD*AGRSNRTPCHTPTF
Trigger: GAAAGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 90 bp GGGGCTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCAT +
Preference number: 1 (lower is better)
Translates to: GAVDIHHGWPDCYLL*LDALTGQVVQIGHH
Trigger: ATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 90 bp ACGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTTCTCTGGGGAATGGCGATATCCCCC +
Preference number: 1 (lower is better)
Translates to: TLAASEEVQVLMLEV*VVQDHVLWGMAISP
Trigger: GGGGGATATCGCCATTCCCCAGAGAACATGATCCTGAACGACCCAGACTTCCAGCATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR TCA 90 bp TGGCTGCACGGAGTTTATATGCTTCGGTTAGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: WLHGVYMLRLGFRGC*YPPWLARLLPAVAG
Trigger: TCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCCGAAAGCCTAACCGAAGCATATAAACTCCGTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 90 bp TTGAGCCCAGGAGTTGGTGGCCAAAGTGTGCTACAATCACACCACTaGATTCCAGCCTGGGTGAGAGTGAGACCCTCATGGGGTGGAAAA +
Preference number: 1 (lower is better)
Translates to: LSPGVGGQSVLQSHH*IPAWVRVRPSWGGK
Trigger: TTTTCCACCCCATGAGGGTCTCACTCTCACCCAGGCTGGAATGCAGTGGTGTGATTGTAGCACACTTTGGCCACCAACTCCTGGGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR GCA 90 bp TTGACCAATGCCTTCGTTAATCCGGTGATAGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGGAAA +
Preference number: 1 (lower is better)
Translates to: LTNAFVNPVIGLLHV*AHKLEGIGSGQEWK
Trigger: TTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAAGGCATTGGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATaGCACACACCAACTTTCCTGAGTGCACCTGATCATAACTTTTCA +
Preference number: 1 (lower is better)
Translates to: VAGCADWAGRSNRTP*HTPTFLSAPDHNFS
Trigger: TGAAAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 90 bp GGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTTTCCTaGGTGCACCTGATCATAACTTTTCATCAGGAACCTAGCCGTCTG +
Preference number: 1 (lower is better)
Translates to: GQVVQIGHHATHQLS*VHLIITFHQEPSRL
Trigger: CAGACGGCTAGGTTCCTGATGAAAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 90 bp CACCATTTAATGGAGGTCACAGTAGGACTGTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGG +
Preference number: 1 (lower is better)
Translates to: HHLMEVTVGLLRMNS*VSGSYVAVVSKPRR
Trigger: CCTTCGAGGCTTGGAAACCACAGCCACGTATGACCCTGAAACCCAGGAGTTCATTCTCAACAGTCCTACTGTGACCTCCATTAAATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR GCA 90 bp CAGTTTCCTGGCACTCCTCCTCTCTCTAGCTGTAGTAGCAGCTACTaGTTGAAGACAACCTATATATCCCAGGCATACCCTCTACACGTA +
Preference number: 1 (lower is better)
Translates to: QFPGTPPLSSCSSSY*LKTTYISQAYPLHV
Trigger: TACGTGTAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACAGCTAGAGAGAGGAGGAGTGCCAGGAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
3UTR GCA 90 bp CACAGGACACCATTAAGCCAGGGCTGGGTAACAACATATGCTCAATaGATCTTCTCAGGTGAGAACCAAACTCGAGCCACAACAGCAAAG +
Preference number: 1 (lower is better)
Translates to: HRTPLSQGWVTTYAQ*IFSGENQTRATTAK
Trigger: CTTTGCTGTTGTGGCTCGAGTTTGGTTCTCACCTGAGAAGATGCATTGAGCATATGTTGTTACCCAGCCCTGGCTTAATGGTGTCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CCA 90 bp AGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTTGAAAATCCA +
Preference number: 1 (lower is better)
Translates to: RSPSCMRPQTGRHRQ*PGVERVYTAGFENP
Trigger: TGGATTTTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 90 bp CATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTaGAAAGAGTTTATACTGCTGGGTTTGAAAATCCAAAATCTGTGG +
Preference number: 1 (lower is better)
Translates to: HVCAHKLEGIGSGQE*KEFILLGLKIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 90 bp TTCCTGGCACTCCTCCTCTCTCTAGCTGTAGTAGCAGCTACTGCTTaGAGACAACCTATATATCCCAGGCATACCCTCTACACGTATAAA +
Preference number: 1 (lower is better)
Translates to: FLALLLSLAVVAATA*RQPIYPRHTLYTYK
Trigger: TTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACAGCTAGAGAGAGGAGGAGTGCCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
3UTR TCA 90 bp ACTGGAGCCACTCACAACTATTGGTACAACTGCAGTAATTACAGCTaGTTTACAGCTGTCCACTCAGGCAGGTATCACTCCTTCCTTTTT +
Preference number: 1 (lower is better)
Translates to: TGATHNYWYNCSNYS*FTAVHSGRYHSFLF
Trigger: AAAAAGGAAGGAGTGATACCTGCCTGAGTGGACAGCTGTAAATCAGCTGTAATTACTGCAGTTGTACCAATAGTTGTGAGTGGCTCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CCA 90 bp TTCTCCCTCAAAGGTACAGCTTGGGGTGAAATTGACATAAATATTTaGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCAT +
Preference number: 1 (lower is better)
Translates to: FSLKGTAWGEIDINI*KTTAMRIAMPTTSH
Trigger: ATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAAATATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 90 bp AGACAATGGTCCTACAGTAGGCCCGTGCGGAATAAGTTCCCTCGTTaGAAAAATGCTAGCATGAATAGTTTGATAAATGCAATCCATCAG +
Preference number: 1 (lower is better)
Translates to: RQWSYSRPVRNKFPR*KNASMNSLINAIHQ
Trigger: CTGATGGATTGCATTTATCAAACTATTCATGCTAGCATTTTTCCAACGAGGGAACTTATTCCGCACGGGCCTACTGTAGGACCATTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR TCA 90 bp CAAGCTTTTAATGGCTTATGCCAAGATGACAGAATATGTGAAATCTaGTTGTCCCAGAGTTACACTCTGCACTCCAAAGCTACAACAGTG +
Preference number: 1 (lower is better)
Translates to: QAFNGLCQDDRICEI*LSQSYTLHSKATTV
Trigger: CACTGTTGTAGCTTTGGAGTGCAGAGTGTAACTCTGGGACAATCAGATTTCACATATTCTGTCATCTTGGCATAAGCCATTAAAAGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR TCA 90 bp AAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTaGTTCACAGGGATCTCCAAGATCATGCATTTGAAGAGTTTTATT +
Preference number: 1 (lower is better)
Translates to: KGKGGILSRSCLKNY*FTGISKIMHLKSFI
Trigger: AATAAAACTCTTCAAATGCATGATCTTGGAGATCCCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp CTACCTGCTGTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCACCAGCGGTGAGGGCATaGAGCTCAGGCAGTTCACTC +
Preference number: 2 (lower is better)
Translates to: LPAVAGCADWAGRSNRTPPAVRA*SSGSSL
Trigger: GAGTGAACTGCCTGAGCTTCATGCCCTCACCGCTGG...TGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGG +
Preference number: 2 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPDCYLL*LDALTG
Trigger: CCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTC...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCAGGAACATGCCCAAGTaGAGATCCAGAGGCTCAGGC +
Preference number: 2 (lower is better)
Translates to: LLISTMVGQTATCCGWMRRNMPK*RSRGSG
Trigger: GCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCT...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR CAA 90 bp CTGGCTGCACGGAGTTTATATGCTTCGGTTAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: LAARSLYASVRLSGL*ISTMVGQTATCCGW
Trigger: CCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCCGAAAGCCTAACCGAAGCATATAAACTCCGTGCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAACCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGG +
Preference number: 2 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTAVSRM*HQASPG
Trigger: CCCAGGTGAAGCCTGATGGCACATACGTGAAACCGC...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: LYRMAMVHALDRARAASPTNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp CACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTGACTGGGCAGGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 2 (lower is better)
Translates to: HHGWPDCYLLWLDALTGQDGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...CTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTCACTCAGGTCCCCTTaGCCAATGCCTTCGTTAATC +
Preference number: 2 (lower is better)
Translates to: LLISTMVGQTATCCGWMRSLRSP*PMPSLI
Trigger: GATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGA...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAATGTGGCTGGATGCGCTaGCTGGGCAGGTCGTTCAAA +
Preference number: 2 (lower is better)
Translates to: TTSHPTCFNASVCSPGGECGWMR*LGRSFK
Trigger: TTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACA...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCATCCGACATGCTTCAATaGCAGTGTTTGCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPSDMLQ*QCLQSR
Trigger: CCTGGACTGCAAACACTGGCATTGAAGCATGTCGGA...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 2 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR GCA 90 bp ACTCCTGGGTTTCAGGGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGGTGAGAGGTGGGCAGGAACATaGCCAAGTGAAGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: TPGFQGHTWLWFPSLEGERWAGT*PSEDPE
Trigger: CTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCT...CTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACCCTGAAACCCAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR GCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGATGAAGAAGCGCTCCTaGTGCTCCGCAGTTGCCTGG +
Preference number: 2 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQMKKRS*CSAVAW
Trigger: CCAGGCAACTGCGGAGCAGCAGGAGCGCTTCTTCAT...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CCA 90 bp GGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTT +
Preference number: 2 (lower is better)
Translates to: GSGSPGLISDWCLTALYRGRHRQ*PGVERV
Trigger: AACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC...CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTCCGTCTGGAGCATCATaGCAGTGTTTTCTCCCTCAA +
Preference number: 2 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTPSGAS*QCFLPQ
Trigger: TTGAGGGAGAAAACACTGTCATGATGCTCCAGACGG...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTCCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 2 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 2 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 2 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVLISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 2 (lower is better)
Translates to: LLISTMVGQTATCCGWMRWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 2 (lower is better)
Translates to: LYRMAMVHALDRARAASPDGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTCCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTCCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 2 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACAGTTCCAGGCGGGCATaGAGAAGCGCTCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDSSRRA*RSAPAA
Trigger: AGCAGCAGGAGCGCTTCTTCATGCCCGCCTGGAACT...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CCA 90 bp ACTCCTGGGTTTCAGGGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGGTGAGCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 2 (lower is better)
Translates to: TPGFQGHTWLWFPSLEGELMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...CTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACCCTGAAACCCAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR TCA 90 bp GGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTTGAACTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: GRHRQWPGVERVYTAGFELVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...TTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTCCATAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWESIGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTATGGA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587927.5
3UTR-3UTR GCA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGC +
Preference number: 2 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCGLLHV*AHKLEG
Trigger: GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACC...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp GAAGTCTTTCCAAGCCCACCAGGCCACCATTTAATGGAGGTCACAGTAGGACTGTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: EVFPSPPGHHLMEVTVGLFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...CAGTCCTACTGTGACCTCCATTAAATGGTGGCCTGGTGGGCTTGGAAAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CCA 90 bp GACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAAAATGTCTAGGAGAAACTGATGTCCTGAGGTaGGTTACCCACAGACCCTCA +
Preference number: 2 (lower is better)
Translates to: DVYRPEPWTSFQGKCLGETDVLR*VTHRPS
Trigger: TGAGGGTCTGTGGGTAACCCACCTCAGGACATCAGT...TTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576743.1
3UTR-3UTR TCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGACACACCAACTTTCCTaGGTGCACCTGATCATAACT +
Preference number: 2 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQTHQLS*VHLIIT
Trigger: AGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGT...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTGGGCATAAGTGCCAATaGTCTCCAAGTTCCAGGCGG +
Preference number: 2 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPGHKCQ*SPSSRR
Trigger: CCGCCTGGAACTTGGAGATCATTGGCACTTATGCCC...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR GCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGTCAGGCCGCCCTCGGTaGACAAAATTTTTAAACCAC +
Preference number: 2 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQSGRPR*TKFLNH
Trigger: GTGGTTTAAAAATTTTGTGCACCGAGGGCGGCCTGA...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CCA 90 bp GGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 2 (lower is better)
Translates to: GSAMPNSLIFFTMMALFLLMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...CAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR-3UTR CCA 90 bp TTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: FIRVSDAKLPHLLHHDGTFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...AGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR-3UTR TCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 2 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQNYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTTCCGACATGCTTCAATaGCAGTGTTTGCAGTCCAGG +
Preference number: 2 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCSDMLQ*QCLQSR
Trigger: CCTGGACTGCAAACACTGGCATTGAAGCATGTCGGA...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp ATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGAAGCCTCCCGAGTAGCTaGGACTACAGGCGCGTGCTA +
Preference number: 2 (lower is better)
Translates to: IYPRHTLYTYKKMCRCYRSLPSS*DYRRVL
Trigger: TAGCACGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...TCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR CCA 90 bp CAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCCATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 2 (lower is better)
Translates to: QTPWSRKSACYSAVSRMCHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...GCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCCATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 2 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp TTTCATCAGGAACCTAGCCGTCTGGAGCATCATGACAGTGTTTTCTCCCTCAAAGATATCCACCATGGTTaGCCAGACTGCTACCTGCTG +
Preference number: 2 (lower is better)
Translates to: FHQEPSRLEHHDSVFSLKDIHHG*PDCYLL
Trigger: CAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC...TTTGAGGGAGAAAACACTGTCATGATGCTCCAGACGGCTAGGTTCCTGATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCACAATTTCTACTAATCTaGCTGCACGGAGTTTATATG +
Preference number: 2 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPQFLLI*LHGVYM
Trigger: CATATAAACTCCGTGCAGCCAGATTAGTAGAAATTG...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp AATAGGACACCATGCCACACACCAACTTTCCTGAGTGCACCTGATCATAACTTTCTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: NRTPCHTPTFLSAPDHNFLVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...AAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGTTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 2 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQLNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp GAAATAACAGTGAATGACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAGCAATCACTGTTAACTaGTGTCCTGAGGTGGGTTAC +
Preference number: 2 (lower is better)
Translates to: EITVNDVYRPEPWTSFQGAITVN*CPEVGY
Trigger: GTAACCCACCTCAGGACATCAGTTAACAGTGATTGC...TCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTCATTCACTGTTATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
3UTR-3UTR GCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAACCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp ACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTGTCAACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 2 (lower is better)
Translates to: TSFHTHSHHSGQAQSQVSTNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...TGACACTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp ACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTGTCACCATCAGGCTTCACCTaGGCATACTTCATCAGCATG +
Preference number: 2 (lower is better)
Translates to: TSFHTHSHHSGQAQSQVSPSGFT*AYFISM
Trigger: CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGG...TGACACTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTTGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 2 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGCTCAAAGGTACAGCTTaGGGTGAAATTGACATAAAT +
Preference number: 2 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVLKGTA*GEIDIN
Trigger: ATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAG...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp ATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGCAGGATCATGTTCTCTaGGGAATGGCGATATCCCCC +
Preference number: 2 (lower is better)
Translates to: IISSGSAMPNSLIFFTMMQDHVL*GMAISP
Trigger: GGGGGATATCGCCATTCCCCAGAGAACATGATCCTG...CATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR-3UTR TCA 90 bp AAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGACAGCCACCTCATACACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: KLPHLLHHDGTFPDSHLIHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...TATGAGGTGGCTGTCAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR TCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGTTATACTGCTGGGTTTaGAAATCCAAAATCTGTGGT +
Preference number: 2 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQLYCWV*KSKICG
Trigger: ACCACAGATTTTGGATTTTCAAACCCAGCAGTATAA...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp CTCAAACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 2 (lower is better)
Translates to: LKQVFIHIPIIAAKHRAKKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...CTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGTTTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACCCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATA +
Preference number: 2 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDPGKGL*VPISRI
Trigger: TATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGG...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp ACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTGTCAAGGAACCTAGCCGTCTaGAGCATCATGACAGTGTTT +
Preference number: 2 (lower is better)
Translates to: TSFHTHSHHSGQAQSQVSRNLAV*SIMTVF
Trigger: AAACACTGTCATGATGCTCCAGACGGCTAGGTTCCT...TGACACTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: SKSEHQQDSWSQVISFLAHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp ATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGAGGCTCTGCAGGTCGATaGTCTCCTCAAACCTGCAAA +
Preference number: 2 (lower is better)
Translates to: IYPRHTLYTYKKMCRCYRGSAGR*SPQTCK
Trigger: TTTGCAGGTTTGAGGAGATCATCGACCTGCAGAGCC...TCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCC +
Preference number: 2 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEGFRGC*YPPWLA
Trigger: GGCCAACCATGGTGGATATCAACAGCCCCGAAAGCC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATCCTACAGTAGGCCCGTaGGGAATAAGTTCCCTCGTT +
Preference number: 2 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYPTVGP*GISSLV
Trigger: AACGAGGGAACTTATTCCGCACGGGCCTACTGTAGG...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 90 bp ATTAAGGTTTATTCAATGTCACAGAGGAAAGAACGGTTTGTAGTTTaGCTTACCCGCAGTGCTGGCAGGTCACAGCTGTCCAACCATGAT +
Preference number: 2 (lower is better)
Translates to: IKVYSMSQRKERFVV*LTRSAGRSQLSNHD
Trigger: ATCATGGTTGGACAGCTGTGACCTGCCAGCACTGCGGGTAAGCAAAACTACAAACCGTTCTTTCCTCTGTGACATTGAATAAACCTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 90 bp GTGCGGAATAAGTTCCCTCGTTGGAAAAATGCTAGCATGAATAGTTaGATAAATGCAATCCATCAGCAAAGGAGAGCAAGCAGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VRNKFPRWKNASMNS*INAIHQQRRASRQR
Trigger: TCTCTGCCTGCTTGCTCTCCTTTGCTGATGGATTGCATTTATCAAACTATTCATGCTAGCATTTTTCCAACGAGGGAACTTATTCCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp ATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 2 (lower is better)
Translates to: IISSGSAMPNSLIFFTMMNYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...CATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR CAA 90 bp GATGGAATAACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTaGTCTAAAGAATTATTGATTCACAGGGATCTCCAAGATCATGCA +
Preference number: 2 (lower is better)
Translates to: DGITRKRERRDFEPQ*SKELLIHRDLQDHA
Trigger: TGCATGATCTTGGAGATCCCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGTTATTCCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTTTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 2 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp CCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACCCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: PIYPRHTLYTYKKMCRCYPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...GTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 2 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp CGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTTCTATGCAACTGGATTaGGGGGTGTCATTCCAAACA +
Preference number: 2 (lower is better)
Translates to: RKRERRDFEPQLSKELLISMQLD*GVSFQT
Trigger: TGTTTGGAATGACACCCCCCAATCCAGTTGCATAGA...AATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTAT +
Preference number: 2 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEGLISD*CLTALY
Trigger: ATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCAACAGTGCCACAGCTaGGAGGTTTCCCTATACTTC +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAQQCHS*EVSLYF
Trigger: GAAGTATAGGGAAACCTCTCAGCTGTGGCACTGTTG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp AGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCACAGGTACTTCCTACTACTGTaGCAATTTAGCAATCCTTCA +
Preference number: 2 (lower is better)
Translates to: RERRDFEPQLSKELLIHRYFLLL*QFSNPS
Trigger: TGAAGGATTGCTAAATTGTCACAGTAGTAGGAAGTA...CCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGACAAGCCATCCGACATaGTTCAATGCCAGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQATSHPT*FNASVC
Trigger: GCAAACACTGGCATTGAAGCATGTCGGATGGCTTGT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAGATTCCACAAAATTTaGGTTGCACACAGGCGCTTT +
Preference number: 2 (lower is better)
Translates to: LNSKKIPQNLSCTQALSERFHKI*VAHRRF
Trigger: AAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGAGATTCCACAAAATTTaGGTTGCACACAGGCGCTTT +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQARFHKI*VAHRRF
Trigger: AAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATAATAAGTTCCCTCGTTaGAAAAATGCTAGCATGAAT +
Preference number: 2 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYNKFPR*KNASMN
Trigger: ATTCATGCTAGCATTTTTCCAACGAGGGAACTTATT...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGAGAATATGTGAAATCTaGTTGTCCCAGAGTTACACT +
Preference number: 2 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQARICEI*LSQSYT
Trigger: AGTGTAACTCTGGGACAATCAGATTTCACATATTCT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR CCA 90 bp ACAGTAATCTCCAAGCTTTTAATGGCTTATGCCAAGATGACAGAATATGTGAAAAAAGTCATAGTCTACTaGGATCAGCAGCATTACAAA +
Preference number: 2 (lower is better)
Translates to: TVISKLLMAYAKMTEYVKKVIVY*DQQHYK
Trigger: TTTGTAATGCTGCTGATCCCAGTAGACTATGACTTT...TTTCACATATTCTGTCATCTTGGCATAAGCCATTAAAAGCTTGGAGATTACTGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR TCA 72 bp TACCCGCAGTGCTGGCAGGTCACAGCTGTCCAACCATaGTCCATTCACATGCTCTGGCCCCGTGCCCCTCGT +
Preference number: 3 (lower is better)
Translates to: YPQCWQVTAVQP*SIHMLWPRAPR
Trigger: ACGAGGGGCACGGGGCCAGAGCATGTGAATGGATCATGGTTGGACAGCTGTGACCTGCCAGCACTGCGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR GCA 72 bp TTCGGGGCTGTTGATATCCACCATGGTTGGCCAGACTaGTACCTGCTGTGGCTGGATGCGCTGACTGGGCAG +
Preference number: 3 (lower is better)
Translates to: FGAVDIHHGWPD*YLLWLDALTGQ
Trigger: CTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp CCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATaGGCTGACTGGGCAGGTCGTTCAAATAGGACACCA +
Preference number: 3 (lower is better)
Translates to: PWLARLLPAVAG*ADWAGRSNRTP
Trigger: TGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp GCCAGACTGCTACCTGCTGTGGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGGACACCATGCCACACA +
Preference number: 3 (lower is better)
Translates to: ARLLPAVAGCAD*AGRSNRTPCHT
Trigger: TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp AGGTGGGAGAATCGCTCGAACCCGGGAGGTGAAGATTaGAGTGAAGTCGAGATCGCACCATTGCATTCCCGC +
Preference number: 3 (lower is better)
Translates to: RWENRSNPGGED*SEVEIAPLHSR
Trigger: GCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCCCGGGTTCGAGCGATTCTCCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
3UTR-3UTR CAA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCATCTGGTTCACCTGGCTaGATTTCAGACTGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPSGSPG*ISDWCL
Trigger: GAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGA...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTCCTGCTGCTCCGCAGTaGCCTGGTGAAGCAAGGTGG +
Preference number: 3 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCPAAPQ*PGEARW
Trigger: CCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAGG...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR CCA 72 bp GATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATA +
Preference number: 3 (lower is better)
Translates to: DIHHGWPDCYLL*LDALTGQVVQI
Trigger: TATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp CGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGGATCATGTTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: RWLRVRKFKSSC*KSGSFRIMFSG
Trigger: CCCAGAGAACATGATCCTGAACGACCCAGACTTCCAGCATGAGGACTTGAACTTCCTCACTCGCAGCCAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR-3UTR CAA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAAT +
Preference number: 3 (lower is better)
Translates to: LYRMAMVHALDRARAASPFTQVP*TNAFVN
Trigger: ATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAA...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp TGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGGATGGCAATGGTGCAC +
Preference number: 3 (lower is better)
Translates to: CGSGSPGLISDW*LTALYRMAMVH
Trigger: GTGCACCATTGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp GCCTTCGTTAATCCGGTGATAGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGCATAGGCAGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: AFVNPVIGLLHV*AHKLEGIGSGQ
Trigger: CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGTCTGGTTCACCTGGCTaGATTTCAGACTGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQSGSPG*ISDWCL
Trigger: GAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGA...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp GTGAGGTACTGGGTCAAAGGGGGCTCTGCAGGTCGATaGTCTCCTCAAACCTGCAAAGACATCCCATCTATG +
Preference number: 3 (lower is better)
Translates to: VRYWVKGGSAGR*SPQTCKDIPSM
Trigger: CATAGATGGGATGTCTTTGCAGGTTTGAGGAGATCATCGACCTGCAGAGCCCCCTTTGACCCAGTACCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CCA 72 bp ATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTATCGGATGGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: ICGSGSPGLISD*CLTALYRMAMV
Trigger: CACCATTGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp TTTAAGCCAGGCCCCAGGGTAAGTCTGGTAGAACACTaGGCAGGAAAGCTTGGAAGGGTTCTACACCACTTC +
Preference number: 3 (lower is better)
Translates to: FKPGPRVSLVEH*AGKLGRVLHHF
Trigger: GAAGTGGTGTAGAACCCTTCCAAGCTTTCCTGCTCAGTGTTCTACCAGACTTACCCTGGGGCCTGGCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR TCA 72 bp GGAGTTTATATGCTTCGGTTAGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCCAGACTGCTACCTGCT +
Preference number: 3 (lower is better)
Translates to: GVYMLRLGFRGC*YPPWLARLLPA
Trigger: AGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCCGAAAGCCTAACCGAAGCATATAAACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp GGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGGCTGGGCAAGAACTATaGCATGATTTGAAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: GSGSPGLISDWCLTALYRAGQEL*HDLKSF
Trigger: GAAAGACTTCAAATCATGCAATAGTTCTTGCCCAGC...CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp GGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGCAGCTGGGCAAGAACTATaGCATGATTTGAAGTCTTTC +
Preference number: 3 (lower is better)
Translates to: GSPGLISDWCLTALYRMAAGQEL*HDLKSF
Trigger: GAAAGACTTCAAATCATGCAATAGTTCTTGCCCAGC...TGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp ACTTGTCCTTGTGACACTTCAGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGATTCGTGGACCTCTGC +
Preference number: 3 (lower is better)
Translates to: TCPCDTSELGLQ*LQVLVRFVDLC
Trigger: GCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCACAAGGACAAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp GGCACTCCTCCTCTCTCTAGCTGTAGTAGCAGCTACTaGTTGAAGACAACCTATATATCCCAGGCATACCCT +
Preference number: 3 (lower is better)
Translates to: GTPPLSSCSSSY*LKTTYISQAYP
Trigger: AGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACAGCTAGAGAGAGGAGGAGTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
3UTR GCA 72 bp CGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGGCATACTTCATCAGCA +
Preference number: 3 (lower is better)
Translates to: RKSACYSAVSRM*HQASPGHTSSA
Trigger: TGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp TCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: SCMRPQTGRHRQ*PGVERVYTAGF
Trigger: AAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp ATGGAGGTCACAGTAGGACTGTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTGGCTGTGGTTTCCAAG +
Preference number: 3 (lower is better)
Translates to: MEVTVGLLRMNS*VSGSYVAVVSK
Trigger: CTTGGAAACCACAGCCACGTATGACCCTGAAACCCAGGAGTTCATTCTCAACAGTCCTACTGTGACCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CAA 90 bp TTTCCTGACAGCCACCTCATAACGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCGAACTATTGCATGATTaGAAGTCTTTCCAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: FPDSHLITLAASEEVQVLELLHD*KSFQAH
Trigger: GTGGGCTTGGAAAGACTTCAAATCATGCAATAGTTC...GAGGACTTGAACTTCCTCACTCGCAGCCAGCGTTATGAGGTGGCTGTCAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
3UTR-3UTR CAA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACATTTATACTGCTGGGTTaGAAAATCCAAAATCTGTGG +
Preference number: 3 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTFILLG*KIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAA...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 3 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp CTCCTCCTCTCTCTAGCTGTAGTAGCAGCTACTGCTTaGAGACAACCTATATATCCCAGGCATACCCTCTAC +
Preference number: 3 (lower is better)
Translates to: LLLSLAVVAATA*RQPIYPRHTLY
Trigger: GTAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACAGCTAGAGAGAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
3UTR TCA 72 bp CTGGGTAACAACATATGCTCAATGCATCTTCTCAGGTaGGAACCAAACTCGAGCCACAACAGCAAAGGGGGA +
Preference number: 3 (lower is better)
Translates to: LGNNICSMHLLR*EPNSSHNSKGG
Trigger: TCCCCCTTTGCTGTTGTGGCTCGAGTTTGGTTCTCACCTGAGAAGATGCATTGAGCATATGTTGTTACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR GCA 72 bp CCATTAAGCCAGGGCTGGGTAACAACATATGCTCAATaGATCTTCTCAGGTGAGAACCAAACTCGAGCCACA +
Preference number: 3 (lower is better)
Translates to: PLSQGWVTTYAQ*IFSGENQTRAT
Trigger: TGTGGCTCGAGTTTGGTTCTCACCTGAGAAGATGCATTGAGCATATGTTGTTACCCAGCCCTGGCTTAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CCA 72 bp CCGATGTCACCAACGGTAATTCCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATAGGTACGATAAAGGCA +
Preference number: 3 (lower is better)
Translates to: PMSPTVIPGKGL*VPISRIGTIKA
Trigger: TGCCTTTATCGTACCTATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGTGACATCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACTCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 3 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDSWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp CAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 3 (lower is better)
Translates to: QTPWSRKSACYSAVSRMCKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...GCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGAACTATTGCATGATTaGAAGTCTTTCCAAGCCCAC +
Preference number: 3 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSELLHD*KSFQAH
Trigger: GTGGGCTTGGAAAGACTTCAAATCATGCAATAGTTC...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR GCA 72 bp CTAATTACACGAGACAATGGTCCTACAGTAGGCCCGTaGGGAATAAGTTCCCTCGTTGGAAAAATGCTAGCA +
Preference number: 3 (lower is better)
Translates to: LITRDNGPTVGP*GISSLVGKMLA
Trigger: TGCTAGCATTTTTCCAACGAGGGAACTTATTCCGCACGGGCCTACTGTAGGACCATTGTCTCGTGTAATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR CAA 90 bp CTCAAACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: LKQVFIHIPIIAAKHRAKYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...CTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGTTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp CAGGGTAAGTCTGGTAGAACACTGAGCAGGAAAGCTTaGAAGGGTTCTACACCACTTCAAAAATACCTTTGC +
Preference number: 3 (lower is better)
Translates to: QGKSGRTLSRKA*KGSTPLQKYLC
Trigger: GCAAAGGTATTTTTGAAGTGGTGTAGAACCCTTCCAAGCTTTCCTGCTCAGTGTTCTACCAGACTTACCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR TCA 72 bp GTTCAAATAGGACACCATGCCACACACCAACTTTCCTaGGTGCACCTGATCATAACTTTTCATCAGGAACCT +
Preference number: 3 (lower is better)
Translates to: VQIGHHATHQLS*VHLIITFHQEP
Trigger: AGGTTCCTGATGAAAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CCA 72 bp AAACCTTTATCTAAGTCAGAACATCAACAAGACTCTTaGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: KPLSKSEHQQDS*SQVISFLALLL
Trigger: GAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAAAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CCA 72 bp GAAATAACAGTGAATGACGTTTATAGGCCAGAGCCCTaGACCAGTTTCCAGGGAAAATGTCTAGGAGAAAAC +
Preference number: 3 (lower is better)
Translates to: EITVNDVYRPEP*TSFQGKCLGEN
Trigger: GTTTTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTCATTCACTGTTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576743.1
3UTR GCA 72 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTaGAGGTGTTACAGACCACCTACACCTAATTCACTT +
Preference number: 3 (lower is better)
Translates to: YPRHTLYTYKKM*RCYRPPTPNSL
Trigger: AAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
3UTR CCA 72 bp TCCTACAGTAGGCCCGTGCGGAATAAGTTCCCTCGTTaGAAAAATGCTAGCATGAATAGTTTGATAAATGCA +
Preference number: 3 (lower is better)
Translates to: SYSRPVRNKFPR*KNASMNSLINA
Trigger: TGCATTTATCAAACTATTCATGCTAGCATTTTTCCAACGAGGGAACTTATTCCGCACGGGCCTACTGTAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR-3UTR CAA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 3 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp GCATGTTTTCTCTGGGAATACGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCTCATCATAACCAAATT +
Preference number: 3 (lower is better)
Translates to: ACFLWEYDGCPF*GSHCLSHHNQI
Trigger: AATTTGGTTATGATGAGATAGACAATGGCTACCTCAAAATGGACAACCATCGTATTCCCAGAGAAAACATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 3 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
3UTR TCA 72 bp CCAAACACCCTCAGATCCTGCCCAGATATTCATCTGTaGACAAGGTATTTCAACACTAATTTTGAAACAATT +
Preference number: 3 (lower is better)
Translates to: PNTLRSCPDIHL*TRYFNTNFETI
Trigger: AATTGTTTCAAAATTAGTGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GAAGCAAGGTGGGCAGGAACATGCCCAAGTGAAGATCCAGAGGCTCAGGCCGCCGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: EARWAGTCPSEDPEAQAAGFRGC*YPPWLA
Trigger: GGCCAACCATGGTGGATATCAACAGCCCCGAAAGCC...GGCGGCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCTCCGCAGTTGCCTGGTaGAGCAAGGTGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LYRMAMVHALDRARAASPSAVAW*SKVGRN
Trigger: GTTCCTGCCCACCTTGCTTCACCAGGCAACTGCGGA...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGACGGAATCCCGCTCCCTaGGCAGGTCCGGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGRNPAP*AGPGSW
Trigger: CCATGAACCCGGACCTGCGCAGGGAGCGGGATTCCG...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GAAGCAAGGTGGGCAGGAACATGCCCAAGTGAAGATCCAGAGGCTCAGGCCGCCAGGAACATGCCCAAGTaGAGATCCAGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EARWAGTCPSEDPEAQAARNMPK*RSRGSG
Trigger: GCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCT...GGCGGCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACTGCTGCTCCGCAGTTaGCTGGTGAAGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTLLLRS*LVKQGG
Trigger: CCCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTCCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACATTGCAGTCCAGGAGGTaGAAGCCTTCAGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: YRMAMVHALDRARAASPTLQSRR*KPSVQR
Trigger: CCGCTGGACTGAAGGCTTTCACCTCCTGGACTGCAA...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAGCAGGAGGATCACTTaGGCCCAGGAGTTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGSRRIT*AQELVA
Trigger: GGCCACCAACTCCTGGGCTCAAGTGATCCTCCTGCT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGGTGAGTTCTTTTTAAACCACGCCCCACAGCGCCCCTaGCTCCGCATCGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GHTWLWFPSLEGEFFLNHAPQRP*LRIEGV
Trigger: GACTCCCTCGATGCGGAGTCAGGGGCGCTGTGGGGC...GTGGTTTAAAAAGAACTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589301.1
CDS-3UTR CCA 90 bp GAAGCAAGGTGGGCAGGAACATGCCCAAGTGAAGATCCAGAGGCTCAGGCCGCCCAGGATCATGTTCTCTaGGGAATGGCGATATCCCCC +
Preference number: 4 (lower is better)
Translates to: EARWAGTCPSEDPEAQAAQDHVL*GMAISP
Trigger: GGGGGATATCGCCATTCCCCAGAGAACATGATCCTG...GGCGGCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp CTACCTGCTGTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCAGGGCATAAGTGCCAATaGTCTCCAAGTTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPAVAGCADWAGRSNRTPGHKCQ*SPSSRR
Trigger: CCGCCTGGAACTTGGAGATCATTGGCACTTATGCCC...TGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTGCCCCACAGCGCCCCTaGCTCCGCATCGAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPAPQRP*LRIEGV
Trigger: GACTCCCTCGATGCGGAGTCAGGGGCGCTGTGGGGC...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LYRMAMVHALDRARAASPGLLHV*AHKLEG
Trigger: GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACC...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACACATGGTTGGCCAGACTaGTACCTGCTGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: YRMAMVHALDRARAASPTHGWPD*YLLWLD
Trigger: ATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATG...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
3UTR CAA 72 bp TCCCAGCTACTCAGGAGACTGAGGAGGGAGGACCATTaGAACCCGGGAGGCAGAGGTCACAGTAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: SQLLRRLRREDH*NPGGRGHSKPR
Trigger: TCTTGGCTTACTGTGACCTCTGCCTCCCGGGTTCAAATGGTCCTCCCTCCTCAGTCTCCTGAGTAGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCCTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLISTMVGQTATCCGWMRLVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATCCAGCGGTGAGGGCATaGAGCTCAGGCAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: MRPQTGRHRQWPGVERVYPAVRA*SSGSSL
Trigger: GAGTGAACTGCCTGAGCTTCATGCCCTCACCGCTGG...ATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCCCGTCTGGAGCATCATaGCAGTGTTTTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LYRMAMVHALDRARAASPPSGAS*QCFLPQ
Trigger: TTGAGGGAGAAAACACTGTCATGATGCTCCAGACGG...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQGFRGC*YPPWLA
Trigger: GGCCAACCATGGTGGATATCAACAGCCCCGAAAGCC...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAAGCAAGGTGGGCAGGAACATGCCCAAGTGAAGATCCAGAGGCTCAGGCCGCCCTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: EARWAGTCPSEDPEAQAALSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...GGCGGCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCTTGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGAGGAACATGCCCAAGTaGAGATCCAGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVRNMPK*RSRGSG
Trigger: GCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCT...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCTCCGCAGTTGCCTGGTaGAGCAAGGTGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSSAVAW*SKVGRN
Trigger: GTTCCTGCCCACCTTGCTTCACCAGGCAACTGCGGA...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGAGTTCCAGGCGGGCATaGAGAAGCGCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMSSRRA*RSAPAA
Trigger: AGCAGCAGGAGCGCTTCTTCATGCCCGCCTGGAACT...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACAAGGTGGGCAGGAACATaGCCAAGTGAAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: YRMAMVHALDRARAASPTRWAGT*PSEDPE
Trigger: CTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCT...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGCTGCTGCTCCGCAGTTaGCTGGTGAAGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: GSAMPNSLIFFTMMALFLLLLRS*LVKQGG
Trigger: CCCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAG...CAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR CCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMDCYLL*LDALTG
Trigger: CCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTC...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGGTTGGCTGGGTGAGGTaGCTTGTGGCTTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEVGWVR*LVAYAC
Trigger: ACAGGCATAAGCCACAAGCCACCTCACCCAGCCAAC...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCCCAGCGGTGAGGGCATaGAGCTCAGGCAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGPAVRA*SSGSSL
Trigger: GAGTGAACTGCCTGAGCTTCATGCCCTCACCGCTGG...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCCCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGTGTGGCTGGATGCGCTaGCTGGGCAGGTCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQCGWMR*LGRSFK
Trigger: TTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACA...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCTCCGCAGTTGCCTGGTaGAGCAAGGTGGGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: QTPWSRKSACYSAVSRMCSAVAW*SKVGRN
Trigger: GTTCCTGCCCACCTTGCTTCACCAGGCAACTGCGGA...GCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGGGCTCTGCAGGTCGATaGTCTCCTCAAACCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEGSAGR*SPQTCK
Trigger: TTTGCAGGTTTGAGGAGATCATCGACCTGCAGAGCC...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGAACATGTTGGCTGGGTaGGGTGGCTTGTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWENMLAG*GGLWLM
Trigger: CATAAGCCACAAGCCACCTCACCCAGCCAACATGTT...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAACATGTTGGCTGGGTaGGGTGGCTTGTGGCTTATG +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGNMLAG*GGLWLM
Trigger: CATAAGCCACAAGCCACCTCACCCAGCCAACATGTT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR GCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQAVSRM*HQASPG
Trigger: CCCAGGTGAAGCCTGATGGCACATACGTGAAACCGC...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGACAGCCACCTCATGAAGAAGCGCTCCTaGTGCTCCGCAGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKLPHLLHHDGTFPDSHLMKKRS*CSAVAW
Trigger: CCAGGCAACTGCGGAGCAGCAGGAGCGCTTCTTCAT...GAGGTGGCTGTCAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACACATGCTCTGGCCCCGTaGCCCTCGTCCTCCCACCCC +
Preference number: 4 (lower is better)
Translates to: QTPSDPAQIFICEQGISTHALAP*PSSSHP
Trigger: GGGGTGGGAGGACGAGGGGCACGGGGCCAGAGCATG...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGTCAGGCCGCCCTCGGTaGACAAAACGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMSGRPR*TKRGPF
Trigger: AAATGGGCCACGTTTTGTGCACCGAGGGCGGCCTGA...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573078.5
CDS-3UTR CCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCATCAGGCTTCACCTaGGCATACTTCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTPSGFT*AYFISM
Trigger: CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCDCYLL*LDALTG
Trigger: CCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTC...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGGATATCCACCATGGTTaGCCAGACTGCTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: GSGSPGLISDWCLTALYRDIHHG*PDCYLL
Trigger: CAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC...CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CCTGACAGCCACCTCATAACGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCAGGATCATGTTCTCTaGGGAATGGCGATATCCCCC +
Preference number: 4 (lower is better)
Translates to: PDSHLITLAASEEVQVLMQDHVL*GMAISP
Trigger: GGGGGATATCGCCATTCCCCAGAGAACATGATCCTG...CATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTTATGAGGTGGCTGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
3UTR CAA 72 bp GAGGGCATGAAGCTCAGGCAGTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAATCCGGTGATAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EGMKLRQFTQVP*TNAFVNPVIGL
Trigger: GAGACCTATCACCGGATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAACTGCCTGAGCTTCATGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGCCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTCACTCAGGTCCCCTTaGCCAATGCCTTCGTTAATC +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWESLRSP*PMPSLI
Trigger: GATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGTCACTCAGGTCCCCTTaGCCAATGCCTTCGTTAATC +
Preference number: 4 (lower is better)
Translates to: GSGSPGLISDWCLTALYRSLRSP*PMPSLI
Trigger: GATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGA...CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTTGCAGTCCAGGAGGTaGAAGCCTTCAGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: EHQQDSWSQVISFLALLLLQSRR*KPSVQR
Trigger: CCGCTGGACTGAAGGCTTTCACCTCCTGGACTGCAA...GAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGACCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp GCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCACTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: AGCADWAGRSNRTPCHTPLSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...TGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGELGLQ*LQVLVR
Trigger: TCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTC...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTAGTTCCAGGCGGGCATaGAGAAGCGCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCSSRRA*RSAPAA
Trigger: AGCAGCAGGAGCGCTTCTTCATGCCCGCCTGGAACT...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAGTCTGGTAGAACACTaGGCAGGAAAGCTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGSLVEH*AGKLGR
Trigger: CCTTCCAAGCTTTCCTGCTCAGTGTTCTACCAGACT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AATAGGACACCATGCCACACACCAACTTTCCTGAGTGCACCTGATCATAACTTTCGGAATCCCGCTCCCTaGGCAGGTCCGGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: NRTPCHTPTFLSAPDHNFRNPAP*AGPGSW
Trigger: CCATGAACCCGGACCTGCGCAGGGAGCGGGATTCCG...AAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573078.5
CDS-3UTR GCA 90 bp CATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATCGGAATCCCGCTCCCTaGGCAGGTCCGGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: HNFIRVSDAKLPHLLHHDRNPAP*AGPGSW
Trigger: CCATGAACCCGGACCTGCGCAGGGAGCGGGATTCCG...ATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589301.1
CDS-3UTR GCA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCCATGGTTGGCCAGACTaGTACCTGCTGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSHGWPD*YLLWLD
Trigger: ATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATG...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp CACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTGACTGGGCAGTCCAAGCTACCTCCTTaGTTTTTCTGTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: HHGWPDCYLLWLDALTGQSKLPP*FFCESL
Trigger: AAGTGATTCACAGAAAAAGCAAGGAGGTAGCTTGGA...CTGCCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCATGAAGAAGCGCTCCTaGTGCTCCGCAGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSMKKRS*CSAVAW
Trigger: CCAGGCAACTGCGGAGCAGCAGGAGCGCTTCTTCAT...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: LLISTMVGQTATCCGWMRLMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATA +
Preference number: 4 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTPGKGL*VPISRI
Trigger: TATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGCAGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GSPGLISDWCLTALYRMAGLISD*CLTALY
Trigger: ATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCC...TGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMAGCAD*AGRSNR
Trigger: CCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGCTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVLCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGACTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGLCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR CCA 90 bp GGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTTGAATCGGTGCACAAAACGTaGCCCATTTCCGTCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRHRQWPGVERVYTAGFESVHKT*PISVWA
Trigger: CGCCCAGACGGAAATGGGCCACGTTTTGTGCACCGA...TTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573078.5
3UTR CAA 72 bp CGGAGTTTATATGCTTCGGTTAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGCCAGACTGCTACCTGC +
Preference number: 4 (lower is better)
Translates to: RSLYASVRLSGL*ISTMVGQTATC
Trigger: GCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAGCCCCGAAAGCCTAACCGAAGCATATAAACTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATAACGCTGGCTGCGAGTaGGGAAGTTCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: MRPQTGRHRQWPGVERVYNAGCE*GSSSPH
Trigger: ATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTT...ATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACAACACACCAACTTTCCTaGGTGCACCTGATCATAACT +
Preference number: 4 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTTHQLS*VHLIIT
Trigger: AGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGT...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp GAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCAGGAACATGCCCAAGTaGAGATCCAGAGGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EHQQDSWSQVISFLALLLRNMPK*RSRGSG
Trigger: GCCTGAGCCTCTGGATCTTCACTTGGGCATGTTCCT...GAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGCATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGCAAGATTCGTGGACCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GSPGLISDWCLTALYRMARFVDL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGTCCACGAATCT...TGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAGATTCGTGGACCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGRFVDL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGTCCACGAATCT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR GCA 90 bp GGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGCATCAGGCCGCCCTCGGTaGACAAAATTTTTAAACCAC +
Preference number: 4 (lower is better)
Translates to: GSPGLISDWCLTALYRMASGRPR*TKFLNH
Trigger: GTGGTTTAAAAATTTTGTGCACCGAGGGCGGCCTGA...TGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGAGGTGGGCAGGAACATaGCCAAGTGAAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMRWAGT*PSEDPE
Trigger: CTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCT...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTCATGATCCATTCACATaGTCTGGCCCCGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPHDPFT*SGPVPL
Trigger: GAGGGGCACGGGGCCAGAGCATGTGAATGGATCATG...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTATGGCGACGACCAGCTaGCAGCGAAGTAAGCACCGA +
Preference number: 4 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCMATTS*QRSKHR
Trigger: TCGGTGCTTACTTCGCTGCCAGCTGGTCGTCGCCAT...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573078.5
CDS-3UTR CCA 90 bp ACTTTTCCTGACAGCCACCTCATAACGCTGGCTGCGAGTGAGGAAGTTCAAGTCGGTCATACGTGGCTGTaGTTTCCAAGCCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: TFPDSHLITLAASEEVQVGHTWL*FPSLEG
Trigger: ACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC...GACTTGAACTTCCTCACTCGCAGCCAGCGTTATGAGGTGGCTGTCAGGAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
CDS-3UTR CCA 90 bp CAGGGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGGTGAGTTCCATGACCCACCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATA +
Preference number: 4 (lower is better)
Translates to: QGHTWLWFPSLEGEFHDPPGKGL*VPISRI
Trigger: TATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGG...TGGGTCATGGAACTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR CCA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGCATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 4 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGCATGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: GSPGLISDWCLTALYRMAWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...TGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAAGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEGRHRQ*PGVERV
Trigger: AACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAAGGAACCTAGCCGTCTaGAGCATCATGACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGRNLAV*SIMTVF
Trigger: AAACACTGTCATGATGCTCCAGACGGCTAGGTTCCT...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp ATTGCATTCCCGCCTGGGAGACTCCATAGGCGCTTTCTGAAGCAGATTAAACTTGCACTTTGGGAAGTGTaGGGGGAGTGGGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: IAFPPGRLHRRFLKQIKLALWEV*GEWECR
Trigger: TCTGCACTCCCACTCCCCCCACACTTCCCAAAGTGC...AAGTTTAATCTGCTTCAGAAAGCGCCTATGGAGTCTCCCAGGCGGGAATGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587927.5
CDS-3UTR TCA 90 bp GACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAAAATGTCTAGGAGAAAACGCTGGCTGCGAGTaGGGAAGTTCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DVYRPEPWTSFQGKCLGENAGCE*GSSSPH
Trigger: ATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTT...TTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR TCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTCTGGAGTCCTTTGGATaGAAGCAGCCATTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTLESFG*KQPFLF
Trigger: AAAGAGAAATGGCTGCTTTCATCCAAAGGACTCCAG...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACAAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: YRMAMVHALDRARAASPTNYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGTCACTCAGGTCCCCTTaGCCAATGCCTTCGTTAATC +
Preference number: 4 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQSLRSP*PMPSLI
Trigger: GATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGA...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATACCAGCGGTGAGGGCATaGAGCTCAGGCAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPIPAVRA*SSGSSL
Trigger: GAGTGAACTGCCTGAGCTTCATGCCCTCACCGCTGG...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATACCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPIPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGACAGCCACCTCATATTGCAGTCCAGGAGGTaGAAGCCTTCAGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: KLPHLLHHDGTFPDSHLILQSRR*KPSVQR
Trigger: CCGCTGGACTGAAGGCTTTCACCTCCTGGACTGCAA...TATGAGGTGGCTGTCAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp ACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTGTCATGTGGCTGGATGCGCTaGCTGGGCAGGTCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: TSFHTHSHHSGQAQSQVSCGWMR*LGRSFK
Trigger: TTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACA...TGACACTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAACCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: LLISTMVGQTATCCGWMRFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GCTTGTTACTCAGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: ACYSAVSRMCHQASPGHTELGLQ*LQVLVR
Trigger: TCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTC...AGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCTGAGTAACAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACATTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: YRMAMVHALDRARAASPTLNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGACAGCCACCTCCATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: AKLPHLLHHDGTFPDSHLHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...GAGGTGGCTGTCAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
CDS-3UTR GCA 90 bp GCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTCCTTGCCGTCTGGGCGTAGGTaGCAATTATCTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ASLARTRSTEVRFQATSLPSGRR*QLSGVL
Trigger: AAGGACTCCAGATAATTGGCACCTACGCCCAGACGG...CAAGGAGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573078.5
CDS-3UTR GCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGACAAGCCATCCGACATaGTTCAATGCCAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQTSHPT*FNASVC
Trigger: GCAAACACTGGCATTGAAGCATGTCGGATGGCTTGT...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GTGGCTGGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VAGCADWAGRSNRTPCHTPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...TGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGGTGGGCAGGAACATaGCCAAGTGAAGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: STRLLVSGHQFPGTPPLSRWAGT*PSEDPE
Trigger: CTCTGGATCTTCACTTGGGCATGTTCCTGCCCACCT...AGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp CTGCTTGAAGACAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGAGCAGGTCCGGGTTCATaGCGACGACCAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLEDNLYIPGIPSTRIKRAGPGS*RRPAGS
Trigger: GCTGCCAGCTGGTCGTCGCCATGAACCCGGACCTGC...TCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp CATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCCATCAGGTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HGPVSQLVTQRFHVCAIRFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...CCTGATGGCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMGLISD*CLTALY
Trigger: ATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCC...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATAGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPIDCYLL*LDALTG
Trigger: CCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTC...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEDGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGATGCGCTGACTGGGCAGGTCGTTCAAATAGGACACCATGCCACACACCAACTGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: GCADWAGRSNRTPCHTPTDGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...AGTTGGTGTGTGGCATGGTGTCCTATTTGAACGACCTGCCCAGTCAGCGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCCCGTCTGGAGCATCATaGCAGTGTTTTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSPSGAS*QCFLPQ
Trigger: TTGAGGGAGAAAACACTGTCATGATGCTCCAGACGG...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCAGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SKSEHQQDSWSQVISFLAGFRGC*YPPWLA
Trigger: GGCCAACCATGGTGGATATCAACAGCCCCGAAAGCC...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GCCAAACTCCCTCATCTTCTTCACCATGATGGCACTTTTCCTGACAGCCACCTCAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: AKLPHLLHHDGTFPDSHLKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...GAGGTGGCTGTCAGGAAAAGTGCCATCATGGTGAAGAAGATGAGGGAGTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp TCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTTCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: STRLLVSGHQFPGTPPLSSEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...AGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCCTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSLSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGACCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp GGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTTGAAGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: GRHRQWPGVERVYTAGFEELGLQ*LQVLVR
Trigger: TCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTC...TTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWELNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGCACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATAGTTCCAGGCGGGCATaGAGAAGCGCTCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNSSRRA*RSAPAA
Trigger: AGCAGCAGGAGCGCTTCTTCATGCCCGCCTGGAACT...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCAGAGGCTGAGGCGAAATaGTCGCTTGAGCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: YPRHTLYTYKKMCRCYRPEAEAK*SLEPRS
Trigger: ACTCCTGGGCTCAAGCGATCATTTCGCCTCAGCCTC...TGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp GCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTCCTTGCATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASLARTRSTEVRFQATSLHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...CAAGGAGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CAATCACTGTTAACTGATGTCCTGAGGTGGGTTACCCACAGACCCTCAATGTGGCATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: QSLLTDVLRWVTHRPSMWHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...CCACATTGAGGGTCTGTGGGTAACCCACCTCAGGACATCAGTTAACAGTGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR GCA 90 bp GAAATAACAGTGAATGACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGACCGTCTGGGCGTAGGTaGCAATTATCTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: EITVNDVYRPEPWTSFQGPSGRR*QLSGVL
Trigger: AAGGACTCCAGATAATTGGCACCTACGCCCAGACGG...TCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTCATTCACTGTTATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR GCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAAGCAATGTGCCTCACTTaGTCGAACAAGGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEAMCLT*SNKVNR
Trigger: TCTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGC...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCTGCTGCTCCGCAGTTaGCTGGTGAAGCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YLSQNINKTLGLRSSVSWLLLRS*LVKQGG
Trigger: CCCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAG...CCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTGGGCATGGTGGCACGTaGCTGTCGTCCCAGCTACTC +
Preference number: 4 (lower is better)
Translates to: NLYIPGIPSTRIKRCAGVGHGGT*LSSQLL
Trigger: GAGTAGCTGGGACGACAGGCACGTGCCACCATGCCC...AACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AAGATGGATGGAATAACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTTTGCTTACCCGCAGTaGTGGCAGGTCACAGCTGTC +
Preference number: 4 (lower is better)
Translates to: KMDGITRKRERRDFEPQLFAYPQ*WQVTAV
Trigger: GACAGCTGTGACCTGCCAGCACTGCGGGTAAGCAAA...CAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGTTATTCCATCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp CATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATATGGCGACGACCAGCTaGCAGCGAAGTAAGCACCGA +
Preference number: 4 (lower is better)
Translates to: HNFIRVSDAKLPHLLHHDMATTS*QRSKHR
Trigger: TCGGTGCTTACTTCGCTGCCAGCTGGTCGTCGCCAT...ATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589301.1
CDS-3UTR CCA 90 bp ACTTTTCCTGACAGCCACCTCATAACGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: TFPDSHLITLAASEEVQVLMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...GACTTGAACTTCCTCACTCGCAGCCAGCGTTATGAGGTGGCTGTCAGGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000589301.1
CDS-3UTR CCA 90 bp GACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAAAATGTCTAGGAGAATTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: DVYRPEPWTSFQGKCLGEFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...TTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR CCA 90 bp CAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: QTPWSRKSACYSAVSRMCTNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...GCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCGRHRQ*PGVERV
Trigger: AACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAAAGGAACCTAGCCGTCTaGAGCATCATGACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: TTSHPTCFNASVCSPGGERNLAV*SIMTVF
Trigger: AAACACTGTCATGATGCTCCAGACGGCTAGGTTCCT...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTTCATCAGGAACCTAGCCGTCTGGAGCATCATGACAGTGTTTTCTCCCTCAAAGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: FHQEPSRLEHHDSVFSLKAGCAD*AGRSNR
Trigger: CCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC...TTTGAGGGAGAAAACACTGTCATGATGCTCCAGACGGCTAGGTTCCTGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATAGCCTCCCGAGTAGCTaGGACTACAGGCGCGTGCTA +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNSLPSS*DYRRVL
Trigger: TAGCACGCGCCTGTAGTCCCAGCTACTCGGGAGGCT...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAAAATGTCTAGGAGAACACAGACCCTCAATGTaGACTAACCGTGGCCCATTT +
Preference number: 4 (lower is better)
Translates to: DVYRPEPWTSFQGKCLGEHRPSM*TNRGPF
Trigger: AAATGGGCCACGGTTAGTCCACATTGAGGGTCTGTG...TTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTAACGCTGGCTGCGAGTaGGGAAGTTCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPNAGCE*GSSSPH
Trigger: ATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTT...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CTGTTGATATCCACCATGGTTGGCCAGACTGCTACCTGCTGTGGCTGGATGCGCTTATACTGCTGGGTTTaGAAATCCAAAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: LLISTMVGQTATCCGWMRLYCWV*KSKICG
Trigger: ACCACAGATTTTGGATTTTCAAACCCAGCAGTATAA...GCGCATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCCAGCGGTGAGGGCATaGAGCTCAGGCAGTTCACTC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADPAVRA*SSGSSL
Trigger: GAGTGAACTGCCTGAGCTTCATGCCCTCACCGCTGG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGACACACCAACTTTCCTaGGTGCACCTGATCATAACT +
Preference number: 4 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQTHQLS*VHLIIT
Trigger: AGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGT...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATTGCATTCCCGCCTGGGAGACTCCATAGGCGCTTTCTGAAGCAGATTAAACTTTCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: IAFPPGRLHRRFLKQIKLSEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...AAGTTTAATCTGCTTCAGAAAGCGCCTATGGAGTCTCCCAGGCGGGAATGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587927.5
CDS-3UTR TCA 90 bp GCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTCCTTGCACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: ASLARTRSTEVRFQATSLHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...CAAGGAGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGAGATTCCACAAAATTTaGGTTGCACACAGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQRFHKI*VAHRRF
Trigger: AAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCT...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCGTAGCAGCTACTGCTTaGAGACAACCTATATATCCC +
Preference number: 4 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSVAATA*RQPIYP
Trigger: GGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTAC...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp CAATCACTGTTAACTGATGTCCTGAGGTGGGTTACCCACAGACCCTCAATGTGGGCAATCACTGTTAACTaGTGTCCTGAGGTGGGTTAC +
Preference number: 4 (lower is better)
Translates to: QSLLTDVLRWVTHRPSMWAITVN*CPEVGY
Trigger: GTAACCCACCTCAGGACATCAGTTAACAGTGATTGC...CCACATTGAGGGTCTGTGGGTAACCCACCTCAGGACATCAGTTAACAGTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR GCA 90 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCAGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: YPRHTLYTYKKMCRCYRPAVSRM*HQASPG
Trigger: CCCAGGTGAAGCCTGATGGCACATACGTGAAACCGC...TGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp CATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: HNFIRVSDAKLPHLLHHDAVSRM*HQASPG
Trigger: CCCAGGTGAAGCCTGATGGCACATACGTGAAACCGC...ATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCLISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHGLLHV*AHKLEG
Trigger: GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACC...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCACAAGCCATCCGACATaGTTCAATGCCAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGTSHPT*FNASVC
Trigger: GCAAACACTGGCATTGAAGCATGTCGGATGGCTTGT...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp ATTGCATTCCCGCCTGGGAGACTCCATAGGCGCTTTCTGAAGCAGATTAAACTTCTTCAGAGCTTGGACTaGAGTGACTTCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: IAFPPGRLHRRFLKQIKLLQSLD*SDFRCL
Trigger: CAAGCACCTGAAGTCACTGCAGTCCAAGCTCTGAAG...AAGTTTAATCTGCTTCAGAAAGCGCCTATGGAGTCTCCCAGGCGGGAATGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587927.5
CDS-3UTR GCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATATGAAGAAGCGCTCCTaGTGCTCCGCAGTTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNMKKRS*CSAVAW
Trigger: CCAGGCAACTGCGGAGCAGCAGGAGCGCTTCTTCAT...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTTCAAGCGATTATCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHFKRLS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGATAATCGCTTGAA...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GACGTTTATAGGCCAGAGCCCTGGACCAGTTTCCAGGGAAAATGTCTAGGAGAACTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: DVYRPEPWTSFQGKCLGELMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...TTCTCCTAGACATTTTCCCTGGAAACTGGTCCAGGGCTCTGGCCTATAAACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR CCA 90 bp GGTCATACGTGGCTGTGGTTTCCAAGCCTCGAAGGTGAGTTCTTTTTAAACCACTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GHTWLWFPSLEGEFFLNHFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...GTGGTTTAAAAAGAACTCACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589301.1
CDS-3UTR CCA 90 bp ACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGTGTCAGGTCATACGTGGCTGTaGTTTCCAAGCCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: TSFHTHSHHSGQAQSQVSGHTWL*FPSLEG
Trigger: ACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC...TGACACTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTG +
Preference number: 4 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQLRMNS*VSGSYV
Trigger: CACGTATGACCCTGAAACCCAGGAGTTCATTCTCAA...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGTCCATTCACATGCTCTaGCCCCGTGCCCCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: RCAGVTDHLHLIHFLSNKSIHML*PRAPRP
Trigger: AGGACGAGGGGCACGGGGCCAGAGCATGTGAATGGA...CTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp CAATCACTGTTAACTGATGTCCTGAGGTGGGTTACCCACAGACCCTCAATGTGGCTGGAGTCCTTTGGATaGAAGCAGCCATTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QSLLTDVLRWVTHRPSMWLESFG*KQPFLF
Trigger: AAAGAGAAATGGCTGCTTTCATCCAAAGGACTCCAG...CCACATTGAGGGTCTGTGGGTAACCCACCTCAGGACATCAGTTAACAGTGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR TCA 90 bp GGCAAAGGCTTATGGGTCCCGATTTCACGAATAGGTACGATAAAGGCATGTAATCTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: GKGLWVPISRIGTIKACNLVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...ATTACATGCCTTTATCGTACCTATTCGTGAAATCGGGACCCATAAGCCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTGCAGTCCAGGAGGTaGAAGCCTTCAGTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLQSRR*KPSVQR
Trigger: CCGCTGGACTGAAGGCTTTCACCTCCTGGACTGCAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATGGCTTTCGGGGCTGTTaGTATCCACCATGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADGFRGC*YPPWLA
Trigger: GGCCAACCATGGTGGATATCAACAGCCCCGAAAGCC...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR TCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGTTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATTGCATTCCCGCCTGGGAGACTCCATAGGCGCTTTCTGAAGCAGATTAAACTTCTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: IAFPPGRLHRRFLKQIKLLSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...AAGTTTAATCTGCTTCAGAAAGCGCCTATGGAGTCTCCCAGGCGGGAATGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587927.5
CDS-3UTR TCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGCCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GAAGTCTTTCCAAGCCCACCAGGCCACCATTTAATGGAGGTCACAGTAGGACTGTTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: EVFPSPPGHHLMEVTVGLLNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...CAGTCCTACTGTGACCTCCATTAAATGGTGGCCTGGTGGGCTTGGAAAGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGATGTCTAAAGAATTATTaGTTCACAGGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGCLKNY*FTGISK
Trigger: CTTGGAGATCCCTGTGAATCAATAATTCTTTAGACA...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGAAGAAACAGCAGAAATaGCTTCCCTGCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEKKQQK*LPCIIS
Trigger: TGAAATAATGCAGGGAAGTCATTTCTGCTGTTTCTT...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCGGAATCCCGCTCCCTaGGCAGGTCCGGGTTCATGG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQARNPAP*AGPGSW
Trigger: CCATGAACCCGGACCTGCGCAGGGAGCGGGATTCCG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
CDS-3UTR GCA 90 bp GGCAAAGGCTTATGGGTCCCGATTTCACGAATAGGTACGATAAAGGCATGTAATGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GKGLWVPISRIGTIKACNGLLHV*AHKLEG
Trigger: GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACC...ATTACATGCCTTTATCGTACCTATTCGTGAAATCGGGACCCATAAGCCTTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACTCCGACATGCTTCAATaGCAGTGTTTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDSDMLQ*QCLQSR
Trigger: CCTGGACTGCAAACACTGGCATTGAAGCATGTCGGA...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACAAGCCATCCGACATaGTTCAATGCCAGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPTSHPT*FNASVC
Trigger: GCAAACACTGGCATTGAAGCATGTCGGATGGCTTGT...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR GCA 90 bp CTCAAACAAGTTTTCATACACATTCCCATCATAGCGGCCAAGCACAGAGCCAAGCTTCAGAGCTTGGACTaGAGTGACTTCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKQVFIHIPIIAAKHRAKLQSLD*SDFRCL
Trigger: CAAGCACCTGAAGTCACTGCAGTCCAAGCTCTGAAG...CTTGGCTCTGTGCTTGGCCGCTATGATGGGAATGTGTATGAAAACTTGTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACAGCAGGCAGAGACTGTaGCAAGCAGAAACTCATTCG +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHSRQRL*QAETHS
Trigger: CGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCT...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp AACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTATGGCGACGACCAGCTaGCAGCGAAGTAAGCACCGA +
Preference number: 4 (lower is better)
Translates to: NLYIPGIPSTRIKRCAGVMATTS*QRSKHR
Trigger: TCGGTGCTTACTTCGCTGCCAGCTGGTCGTCGCCAT...AACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp ATAACCAAATTTGGGGCCGATGTCACCAACGGTAATTCCTGGCAAAGGCTTATGACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ITKFGADVTNGNSWQRLMTNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...CATAAGCCTTTGCCAGGAATTACCGTTGGTGACATCGGCCCCAAATTTGGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGGAAGACCACTGCAATGAGAATAGCCATGCCCACCACAAGCCATCCGACATGTCAGCATGTTTTCTCTaGGAATACGATGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LEDHCNENSHAHHKPSDMSACFL*EYDGCP
Trigger: TGGACAACCATCGTATTCCCAGAGAAAACATGCTGA...CATGTCGGATGGCTTGTGGTGGGCATGGCTATTCTCATTGCAGTGGTCTTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGTCAGCATGTTTTCTCTaGGAATACGATGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMSACFL*EYDGCP
Trigger: TGGACAACCATCGTATTCCCAGAGAAAACATGCTGA...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGCTCAAAGGTACAGCTTaGGGTGAAATTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWELKGTA*GEIDIN
Trigger: ATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAG...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp AATAGGACACCATGCCACACACCAACTTTCCTGAGTGCACCTGATCATAACTTTGATATCCACCATGGTTaGCCAGACTGCTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: NRTPCHTPTFLSAPDHNFDIHHG*PDCYLL
Trigger: CAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC...AAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AAGATGGATGGAATAACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGCTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KMDGITRKRERRDFEPQLLCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...CAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGTTATTCCATCCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTGGGAGGCCTGAGGTaGGAGGGTCACCTGAGGCTA +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFLGGLR*EGHLRL
Trigger: TAGCCTCAGGTGACCCTCCCACCTCAGGCCTCCCAA...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATGCACTTTGGGAAGTGTaGGGGGAGTGGGAGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADALWEV*GEWECR
Trigger: TCTGCACTCCCACTCCCCCCACACTTCCCAAAGTGC...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp CTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGCTTACCCGCAGTGCTaGCAGGTCACAGCTGTCCAA +
Preference number: 4 (lower is better)
Translates to: LYIPGIPSTRIKRCAGVTAYPQC*QVTAVQ
Trigger: TTGGACAGCTGTGACCTGCCAGCACTGCGGGTAAGC...TGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGCCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RCAGVTDHLHLIHFLSNKPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...CTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TTTAAACCACATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: FKPHNFIRVSDAKLPHLLPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...AAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTATGTGGTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACCTTCAGTCCAGCGGTaGGGGCATGAAGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEPSVQR*GHEAQA
Trigger: TGCCTGAGCTTCATGCCCTCACCGCTGGACTGAAGG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: SKSEHQQDSWSQVISFLAPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp AATAGGACACCATGCCACACACCAACTTTCCTGAGTGCACCTGATCATAACTTTTCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: NRTPCHTPTFLSAPDHNFSEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...AAAGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGTGGCATGGTGTCCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCAGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: YPRHTLYTYKKMCRCYRPELGLQ*LQVLVR
Trigger: TCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTC...TGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGCGACCGAGGTGGCAGTaGCAATCTAAATCCGCAGCT +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMRPRWQ*QSKSAA
Trigger: AGCTGCGGATTTAGATTGTCACTGCCACCTCGGTCG...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATGGGCATAAGTGCCAATaGTCTCCAAGTTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYGHKCQ*SPSSRR
Trigger: CCGCCTGGAACTTGGAGATCATTGGCACTTATGCCC...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTGTAGCAGCTACTGCTTaGAGACAACCTATATATCCC +
Preference number: 4 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPVAATA*RQPIYP
Trigger: GGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTAC...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SKSEHQQDSWSQVISFLAHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp ATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCACCATGATGTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: IISSGSAMPNSLIFFTMMLISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...CATCATGGTGAAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR GCA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCTATTTGGAAGACCACTaGAATGAGAATAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGYLEDH*NENSHA
Trigger: GGCATGGCTATTCTCATTGCAGTGGTCTTCCAAATA...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCTATTTGGAAGACCACTaGAATGAGAATAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSYLEDH*NENSHA
Trigger: GGCATGGCTATTCTCATTGCAGTGGTCTTCCAAATA...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp ATAACCAAATTTGGGGCCGATGTCACCAACGGTAATTCCTGGCAAAGGCTTATGAGATTCGTGGACCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ITKFGADVTNGNSWQRLMRFVDL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGTCCACGAATCT...CATAAGCCTTTGCCAGGAATTACCGTTGGTGACATCGGCCCCAAATTTGGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGGTCAAAGGGGGCTCTaGAGGTCGATGATCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LYIPGIPSTRIKRCAGVTGQRGL*RSMISS
Trigger: TGAGGAGATCATCGACCTGCAGAGCCCCCTTTGACC...TGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGCCAAGATCCCACCACTaGACTCCAGTCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LSKSEHQQDSWSQVISFLPRSHH*TPVWVT
Trigger: TGTCACCCAGACTGGAGTGCAGTGGTGGGATCTTGG...CAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCCCAGGTCATACGTGGCTGTaGTTTCCAAGCCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: LFSGEFLAHSNKFSYTFPGHTWL*FPSLEG
Trigger: ACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC...TGGGAATGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTCAAAATCTGTGGTTCTaGTTCACCTGGCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCQNLWF*FTWLDF
Trigger: GAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GCTTGTTACTCAGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTAAAATCCAAAATCTGTaGTTCTGGTTCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ACYSAVSRMCHQASPGHTKIQNL*FWFTWL
Trigger: AAGCCAGGTGAACCAGAACCACAGATTTTGGATTTT...AGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCTGAGTAACAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGCTCAAAGGTACAGCTTaGGGTGAAATTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQLKGTA*GEIDIN
Trigger: ATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAG...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACAGGAACCTAGCCGTCTaGAGCATCATGACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDRNLAV*SIMTVF
Trigger: AAACACTGTCATGATGCTCCAGACGGCTAGGTTCCT...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGACTGCTACCTGCTGTaGCTGGATGCGCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEDCYLL*LDALTG
Trigger: CCCAGTCAGCGCATCCAGCCACAGCAGGTAGCAGTC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACACCCAAACTTGTCAGTaGCAGTCTAGTGTGGTAGAG +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHTQTCQ*QSSVVE
Trigger: CTCTACCACACTAGACTGCCACTGACAAGTTTGGGT...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 72 bp ACTCCTCCTCTCTCTAGCTGTAGTAGCAGCTACTGCTaGAAGACAACCTATATATCCCAGGCATACCCTCTA +
Preference number: 4 (lower is better)
Translates to: TPPLSSCSSSYC*KTTYISQAYPL
Trigger: TAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACAGCTAGAGAGAGGAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAATTATACTGCTGGGTTTaGAAATCCAAAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: TTSHPTCFNASVCSPGGELYCWV*KSKICG
Trigger: ACCACAGATTTTGGATTTTCAAACCCAGCAGTATAA...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATGTGGCTGGATGCGCTaGCTGGGCAGGTCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSECGWMR*LGRSFK
Trigger: TTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GCTTGTTACTCAGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: ACYSAVSRMCHQASPGHTFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...AGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCTGAGTAACAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCCCATCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LFSGEFLAHSNKFSYTFPSEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...TGGGAATGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCACAGGCTAAAGACAAGAACATaGGGGCCCCAAAGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: RERRDFEPQLSKELLIHRLKTRT*GPQSLC
Trigger: ACACAGGCTTTGGGGCCCTCATGTTCTTGTCTTTAG...CCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATAGCTTCTCAGGAGGCTaGGGCAGAGAATTGCTTGAA +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNSFSGG*GRELLE
Trigger: TTCAAGCAATTCTCTGCCTCAGCCTCCTGAGAAGCT...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp CAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTCCGACATGCTTCAATaGCAGTGTTTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QPIYPRHTLYTYKKMCRCSDMLQ*QCLQSR
Trigger: CCTGGACTGCAAACACTGGCATTGAAGCATGTCGGA...ACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATATCAGGCCGCCCTCGGTaGACAAAATTTTTAAACCAC +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPISGRPR*TKFLNH
Trigger: GTGGTTTAAAAATTTTGTGCACCGAGGGCGGCCTGA...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGCCACCCAAAGCCCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: LSKSEHQQDSWSQVISFLPPKAL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGGCTTTGGGTGG...CAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588968.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAATGGCGACGACCAGCTaGCAGCGAAGTAAGCACCGA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEMATTS*QRSKHR
Trigger: TCGGTGCTTACTTCGCTGCCAGCTGGTCGTCGCCAT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
CDS-3UTR CCA 90 bp CCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PIYPRHTLYTYKKMCRCYFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...GTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCTGCTTTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SALFSGEFLAHSNKFSYTFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...TGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATGGTCATACGTGGCTGTaGTTTCCAAGCCTCGAAGGT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADGHTWL*FPSLEG
Trigger: ACCTTCGAGGCTTGGAAACCACAGCCACGTATGACC...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTTGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: HTLYTYKKMCRCYRPPTPWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...AGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp AGCGGTTTCACGTATGTGCCATCAGGCTTCACCTGGGCATACTTCATCAGCATGCTCAAAGGTACAGCTTaGGGTGAAATTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: SGFTYVPSGFTWAYFISMLKGTA*GEIDIN
Trigger: ATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAG...CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGGCACATACGTGAAACCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFAGCAD*AGRSNR
Trigger: CCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGCAATTTCTACTAATCTaGCTGCACGGAGTTTATATG +
Preference number: 4 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQQFLLI*LHGVYM
Trigger: CATATAAACTCCGTGCAGCCAGATTAGTAGAAATTG...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATACTGAGCAGGAAAGCTTaGAAGGGTTCTACACCACTT +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPILSRKA*KGSTPL
Trigger: AAGTGGTGTAGAACCCTTCCAAGCTTTCCTGCTCAG...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AATGTGCCTCACTTGCTCGAACAAGGTCAACAGAAGTTAGGTTCCAAGCTACCTAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: NVPHLLEQGQQKLGSKLPNYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...AGGTAGCTTGGAACCTAACTTCTGTTGACCTTGTTCGAGCAAGTGAGGCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTCACTCAGGTCCCCTTaGCCAATGCCTTCGTTAATC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADSLRSP*PMPSLI
Trigger: GATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTGTGGCTGGATGCGCTaGCTGGGCAGGTCGTTCAAA +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQACGWMR*LGRSFK
Trigger: TTTGAACGACCTGCCCAGTCAGCGCATCCAGCCACA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CTGCTTGAAGACAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGACCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: LLEDNLYIPGIPSTRIKRPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...TCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTGTCTTCAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATTCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYSEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACACTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: QTPSDPAQIFICEQGISTLSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATCACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATCAACAGTGCCACAGCTaGGAGGTTTCCCTATACTTC +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYQQCHS*EVSLYF
Trigger: GAAGTATAGGGAAACCTCTCAGCTGTGGCACTGTTG...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCGGTTTCACGTATGTaGCATCAGGCTTCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEAVSRM*HQASPG
Trigger: CCCAGGTGAAGCCTGATGGCACATACGTGAAACCGC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYLISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLISDW*LTALYR
Trigger: CCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACATGGTTGGCCAGACTaGTACCTGCTGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEHGWPD*YLLWLD
Trigger: ATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp CATTTTGAGGTAGCCATTGTCTATCTCATCATAACCAAATTTGGGGCCGATGTCGCAATGTGCCTCACTTaGTCGAACAAGGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: HFEVAIVYLIITKFGADVAMCLT*SNKVNR
Trigger: TCTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGC...GACATCGGCCCCAAATTTGGTTATGATGAGATAGACAATGGCTACCTCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGAGATTCGTGGACCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: YLSQNINKTLGLRSSVSWRFVDL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGTCCACGAATCT...CCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGACTTCAGAGCTTGGACTaGAGTGACTTCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGLQSLD*SDFRCL
Trigger: CAAGCACCTGAAGTCACTGCAGTCCAAGCTCTGAAG...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCTTCAGAGCTTGGACTaGAGTGACTTCAGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLQSLD*SDFRCL
Trigger: CAAGCACCTGAAGTCACTGCAGTCCAAGCTCTGAAG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp AGGCGCTTTCTGAAGCAGATTAAACTTGTCCTTGTGACACTTCAGAGCTTGGACCCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: RRFLKQIKLVLVTLQSLDPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...GTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAATCTGCTTCAGAAAGCGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCCCTACAGTAGGCCCGTaGGGAATAAGTTCCCTCGTT +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFPTVGP*GISSLV
Trigger: AACGAGGGAACTTATTCCGCACGGGCCTACTGTAGG...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATCCAAGATTTCGCCACTaGACTCTACCCTGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYPRFRH*TLPWVK
Trigger: TTTCACCCAGGGTAGAGTGCAGTGGCGAAATCTTGG...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADFKSSC*KSGSFR
Trigger: CCTGAACGACCCAGACTTCCAGCATGAGGACTTGAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp GGCAAAGGCTTATGGGTCCCGATTTCACGAATAGGTACGATAAAGGCATGTAATTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTG +
Preference number: 4 (lower is better)
Translates to: GKGLWVPISRIGTIKACNLRMNS*VSGSYV
Trigger: CACGTATGACCCTGAAACCCAGGAGTTCATTCTCAA...ATTACATGCCTTTATCGTACCTATTCGTGAAATCGGGACCCATAAGCCTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LSKSEHQQDSWSQVISFLTNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...CAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGGLISD*CLTALY
Trigger: ATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCC...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTAT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADGLISD*CLTALY
Trigger: ATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCC...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCTGGATGCGCTGACTaGGCAGGTCGTTCAAATAGG +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEAGCAD*AGRSNR
Trigger: CCTATTTGAACGACCTGCCCAGTCAGCGCATCCAGC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCGATATCCACCATGGTTaGCCAGACTGCTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFDIHHG*PDCYLL
Trigger: CAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGCTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMLCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAACGCTGGCTGCGAGTaGGGAAGTTCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSENAGCE*GSSSPH
Trigger: ATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCACAAGGAAGGACCTaGCAAACACCATGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPQGRT*QTPWSR
Trigger: ACGGGACCATGGTGTTTGTCAGGTCCTTCCTTGTGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTCTGGTTCACCTGGCTTaGTTTCAGACTGGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITLVHLA*FQTGAS
Trigger: TGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAG...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATAAATCCCCCGCGTTCTaGCTGATTCCATACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADKSPAF*LIPYRE
Trigger: TTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTT...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCACACAGGCGCTTTCTaGAGCAGATTAAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADHTGAF*SRLNLS
Trigger: GGACAAGTTTAATCTGCTTCAGAAAGCGCCTGTGTG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCAAGATTCCACAAAATTTaGGTTGCACACAGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: YPRHTLYTYKKMCRCYRPRFHKI*VAHRRF
Trigger: AAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCT...TGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGGGCATAAGTGCCAATaGTCTCCAAGTTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAGHKCQ*SPSSRR
Trigger: CCGCCTGGAACTTGGAGATCATTGGCACTTATGCCC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293217.10
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTGAACAGCTGGTTTCATaGGGCATATGGCGTAGATTA +
Preference number: 4 (lower is better)
Translates to: QPIYPRHTLYTYKKMCRCEQLVS*GIWRRL
Trigger: TAATCTACGCCATATGCCTCATGAAACCAGCTGTTC...ACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTCCAGATATTCATCTGTaGACAAGGTATTTCAACACT +
Preference number: 4 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPPDIHL*TRYFNT
Trigger: AGTGTTGAAATACCTTGTTCACAGATGAATATCTGG...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AAGCAGGCAGAGACTGTGCCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATAGCCTTCAGGTGTATGTaGTCTGAAATTACAAGTGGT +
Preference number: 4 (lower is better)
Translates to: KQAETVPSRNSFASSFPIAFRCM*SEITSG
Trigger: ACCACTTGTAATTTCAGATCACATACACCTGAAGGC...TATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGGCACAGTCTCTGCCTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACCGTCTGGGCGTAGGTaGCAATTATCTGGAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEPSGRR*QLSGVL
Trigger: AAGGACTCCAGATAATTGGCACCTACGCCCAGACGG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301608.8
ENST00000573078.5
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCATGGTTGGCCAGACTaGTACCTGCTGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAHGWPD*YLLWLD
Trigger: ATCCAGCCACAGCAGGTAGCAGTCTGGCCAACCATG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp GACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTCGGGCAATGTGCCTCACTTaGTCGAACAAGGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: DHLHLIHFLSNKMDGITRAMCLT*SNKVNR
Trigger: TCTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGC...CCGAGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATAGATTCGTGGACCTCTaGTTTGTTCAGTGGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADRFVDL*FVQWGV
Trigger: AACTCCCCACTGAACAAAGCAGAGGTCCACGAATCT...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp AGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGCCCAGAGTTACACTCTaGACTCCAAAGCTACAACAG +
Preference number: 4 (lower is better)
Translates to: RCAGVTDHLHLIHFLSNKPRVTL*TPKLQQ
Trigger: CTGTTGTAGCTTTGGAGTGCAGAGTGTAACTCTGGG...CTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: LSKSEHQQDSWSQVISFLLMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...CAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLMLEV*VVQDHV
Trigger: AACATGATCCTGAACGACCCAGACTTCCAGCATGAG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCACAGGTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTG +
Preference number: 4 (lower is better)
Translates to: RERRDFEPQLSKELLIHRLRMNS*VSGSYV
Trigger: CACGTATGACCCTGAAACCCAGGAGTTCATTCTCAA...CCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGACCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATA +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGPGKGL*VPISRI
Trigger: TATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGG...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTTAAACCACATAATTTCATCAGGGTCAGCGATGCCAAACTCCCTCATCTTCTTCATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 4 (lower is better)
Translates to: FKPHNFIRVSDAKLPHLLHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...AAGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATGAAATTATGTGGTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572047.5
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEGRHRQ*PGVERV
Trigger: AACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACTCTATGCAACTGGATTaGGGGGTGTCATTCCAAACA +
Preference number: 4 (lower is better)
Translates to: PIYPRHTLYTYKKMCRCYSMQLD*GVSFQT
Trigger: TGTTTGGAATGACACCCCCCAATCCAGTTGCATAGA...GTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGTTGGCTGGGTGAGGTaGCTTGTGGCTTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAVGWVR*LVAYAC
Trigger: ACAGGCATAAGCCACAAGCCACCTCACCCAGCCAAC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp CCAAGCAGAAACTCATTCGCATCAAGTTTTCCAATAAGTTTCCTTCCCCCAGTCCATCAACAAGACTCTTaGTCTCAGGTCATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PSRNSFASSFPISFLPPVHQQDS*SQVISF
Trigger: GAAACTGATGACCTGAGACCAAGAGTCTTGTTGATG...GACTGGGGGAAGGAAACTTATTGGAAAACTTGATGCGAATGAGTTTCTGCTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 72 bp ACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTaGTCTAAAGAATTATTGATTCACAGGGATCTCCAA +
Preference number: 4 (lower is better)
Translates to: TRKRERRDFEPQ*SKELLIHRDLQ
Trigger: TTGGAGATCCCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp ACAGTAATCTCCAAGCTTTTAATGGCTTATGCCAAGATGACAGAATATGTGAAAAACGCTGGCTGCGAGTaGGGAAGTTCAAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: TVISKLLMAYAKMTEYVKNAGCE*GSSSPH
Trigger: ATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGTT...TTTCACATATTCTGTCATCTTGGCATAAGCCATTAAAAGCTTGGAGATTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAACACACCAACTTTCCTaGGTGCACCTGATCATAACT +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGTHQLS*VHLIIT
Trigger: AGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGT...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATCTGAGGCTCTGTCATaGTGCTCCCCTGAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSESEALS*CSPEGN
Trigger: ATTTCCTTCAGGGGAGCATCATGACAGAGCCTCAGA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACACCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: QTPSDPAQIFICEQGISTPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TCTGCTTTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACACCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: SALFSGEFLAHSNKFSYTPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...TGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGAGCTTGGACTGCAGTaGCTTCAGGTGCTTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEELGLQ*LQVLVR
Trigger: TCTTACAAGCACCTGAAGTCACTGCAGTCCAAGCTC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCCCAAGATTCCACAAAATTTaGGTTGCACACAGGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LFSGEFLAHSNKFSYTFPRFHKI*VAHRRF
Trigger: AAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCT...TGGGAATGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACATCAGGGTCAGCGATaGCAAACTCCCTCATCTTCT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEHQGQR*QTPSSS
Trigger: AGAAGATGAGGGAGTTTGGCATCGCTGACCCTGATG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGGTCTCCTTCATGTATaGGCCCACAAACTGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAGLLHV*AHKLEG
Trigger: GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTATTTGGAAGACCACTaGAATGAGAATAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNYLEDH*NENSHA
Trigger: GGCATGGCTATTCTCATTGCAGTGGTCTTCCAAATA...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTGCAATGTGCCTCACTTaGTCGAACAAGGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSAMCLT*SNKVNR
Trigger: TCTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGC...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp ATAACCAAATTTGGGGCCGATGTCACCAACGGTAATTCCTGGCAAAGGCTTATGATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: ITKFGADVTNGNSWQRLMILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...CATAAGCCTTTGCCAGGAATTACCGTTGGTGACATCGGCCCCAAATTTGGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATCGCGTGCTACCACCATaGCCAGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYRVLPP*PANFCI
Trigger: AATACAAAAATTAGCTGGGCATGGTGGTAGCACGCG...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACTACAATCACACCACTaGATTCCAGCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELQSHH*IPAWVR
Trigger: TCTCACCCAGGCTGGAATGCAGTGGTGTGATTGTAG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTGGTGGCCAAAGTGTaGTACAATCACACCACTGCA +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFLVAKV*YNHTTA
Trigger: TGCAGTGGTGTGATTGTAGCACACTTTGGCCACCAA...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCAACAACATATGCTCAATaGATCTTCTCAGGTGAGAAC +
Preference number: 4 (lower is better)
Translates to: SKSEHQQDSWSQVISFLATTYAQ*IFSGEN
Trigger: GTTCTCACCTGAGAAGATGCATTGAGCATATGTTGT...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp CCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACCTGGGTAACAACATATaGTCAATGCATCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PIYPRHTLYTYKKMCRCYLGNNI*SMHLLR
Trigger: CCTGAGAAGATGCATTGAGCATATGTTGTTACCCAG...GTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAACCAACGGTAATTCCTaGCAAAGGCTTATGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSETNGNS*QRLMGP
Trigger: GGGACCCATAAGCCTTTGCCAGGAATTACCGTTGGT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTCATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTCCATCAGGCTTCACCTaGGCATACTTCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITPSGFT*AYFISM
Trigger: CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGG...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGGAAGGCATAGGCAGTaGCCAGGAGTGGAAAGAGTT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAGRHRQ*PGVERV
Trigger: AACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGATATCCACCATGGTTaGCCAGACTGCTACCTGCTG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQADIHHG*PDCYLL
Trigger: CAGCAGGTAGCAGTCTGGCCAACCATGGTGGATATC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTTCATCAGGAACCTAGCCGTCTGGAGCATCATGACAGTGTTTTCTCCCTCAAACAATTTCTACTAATCTaGCTGCACGGAGTTTATATG +
Preference number: 4 (lower is better)
Translates to: FHQEPSRLEHHDSVFSLKQFLLI*LHGVYM
Trigger: CATATAAACTCCGTGCAGCCAGATTAGTAGAAATTG...TTTGAGGGAGAAAACACTGTCATGATGCTCCAGACGGCTAGGTTCCTGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELCFVQ*GVLSPL
Trigger: GAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCAATTACACGAGACAATaGTCCTACAGTAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: YKKMCRCYRPPTPNSLPFNYTRQ*SYSRPV
Trigger: CACGGGCCTACTGTAGGACCATTGTCTCGTGTAATT...GAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAATTAGCCAGGTGTGGTaGTGTGCACCAGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEISQVW*CAPVIP
Trigger: TGGGATTACTGGTGCACACCACCACACCTGGCTAAT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp AACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTCCATTAAGCCAGGGCTaGGTAACAACATATGCTCAA +
Preference number: 4 (lower is better)
Translates to: NLYIPGIPSTRIKRCAGVPLSQG*VTTYAQ
Trigger: TTGAGCATATGTTGTTACCCAGCCCTGGCTTAATGG...AACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADNYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADDGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ACAGTAATCTCCAAGCTTTTAATGGCTTATGCCAAGATGACAGAATATGTGAAACCGTCTGGAGCATCATaGCAGTGTTTTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TVISKLLMAYAKMTEYVKPSGAS*QCFLPQ
Trigger: TTGAGGGAGAAAACACTGTCATGATGCTCCAGACGG...TTTCACATATTCTGTCATCTTGGCATAAGCCATTAAAAGCTTGGAGATTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCGTCTGGAGCATCATaGCAGTGTTTTCTCCCTCAA +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPSGAS*QCFLPQ
Trigger: TTGAGGGAGAAAACACTGTCATGATGCTCCAGACGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCCCCGCGTTCTGACTaGTTCCATACAGAGAATACA +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPPRSD*FHTENT
Trigger: TGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGTTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: RCAGVTDHLHLIHFLSNKFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...CTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACTGAGCGAATCAGAGTaGGTAACTCCTTTACACGCT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELSESE*VTPLHA
Trigger: AGCGTGTAAAGGAGTTACTCACTCTGATTCGCTCAG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGACCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGATTTTAAATAAAACGTaGGGTACTGGGTCAAAGGGG +
Preference number: 4 (lower is better)
Translates to: YLSQNINKTLGLRSSVSWILNKT*GTGSKG
Trigger: CCCCTTTGACCCAGTACCTCACGTTTTATTTAAAAT...CCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp ATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGAATCCCGAATTTTCCATaGTCTTCCCAAGACAACCAA +
Preference number: 4 (lower is better)
Translates to: IYPRHTLYTYKKMCRCYRIPNFP*SSQDNQ
Trigger: TTGGTTGTCTTGGGAAGATCATGGAAAATTCGGGAT...TCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAAGTTCAAGTCCTCATaGTGGAAGTCTGGGTCGTTC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEKFKSS*WKSGSF
Trigger: GAACGACCCAGACTTCCAGCATGAGGACTTGAACTT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTCCGACATGCTTCAATaGCAGTGTTTGCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQASDMLQ*QCLQSR
Trigger: CCTGGACTGCAAACACTGGCATTGAAGCATGTCGGA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAATGTGCCTCACTTaGTCGAACAAGGTCAACAGA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEAMCLT*SNKVNR
Trigger: TCTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCAATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: YPRHTLYTYKKMCRCYRPILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...TGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TTATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGCCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LSKSEHQQDSWSQVISFLPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...CAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCCACAAAATTTGAGTTaGACACAGGCGCTTTCTGAA +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADPQNLS*TQALSE
Trigger: TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGACGTATAAAAAGATGTaGAGGTGTTACAGACCACCT +
Preference number: 4 (lower is better)
Translates to: YLSQNINKTLGLRSSVSWTYKKM*RCYRPP
Trigger: AGGTGGTCTGTAACACCTGCACATCTTTTTATACGT...CCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp CATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTTTGAATCTAGGAATGTaGACATATGCAACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: HTLYTYKKMCRCYRPPTPLNLGM*TYATAN
Trigger: GTTAGCTGTTGCATATGTGCACATTCCTAGATTCAA...AGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACATCATAACCAAATTTaGGGCCGATGTCACCAACGG +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEHHNQI*GRCHQR
Trigger: CCGTTGGTGACATCGGCCCCAAATTTGGTTATGATG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCATCAGGCTTCACCTaGGCATACTTCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPSGFT*AYFISM
Trigger: CATGCTGATGAAGTATGCCCAGGTGAAGCCTGATGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGCAAAATCTGTGGTTCTaGTTCACCTGGCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMQNLWF*FTWLDF
Trigger: GAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAGGAACCTAGCCGTCTaGAGCATCATGACAGTGTTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSERNLAV*SIMTVF
Trigger: AAACACTGTCATGATGCTCCAGACGGCTAGGTTCCT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGGCCACTCACAACTATTaGTACAACTGCAGTAATTAC +
Preference number: 4 (lower is better)
Translates to: YLSQNINKTLGLRSSVSWATHNY*YNCSNY
Trigger: GTAATTACTGCAGTTGTACCAATAGTTGTGAGTGGC...CCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGCATCAACAAGACTCTTaGTCTCAGGTCATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMHQQDS*SQVISF
Trigger: GAAACTGATGACCTGAGACCAAGAGTCTTGTTGATG...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACTGGAGTCCTTTGGATaGAAGCAGCCATTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELESFG*KQPFLF
Trigger: AAAGAGAAATGGCTGCTTTCATCCAAAGGACTCCAG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301608.8
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAACACACCAACTTTCCTaGGTGCACCTGATCATAACT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSETHQLS*VHLIIT
Trigger: AGTTATGATCAGGTGCACTCAGGAAAGTTGGTGTGT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp CAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: QPIYPRHTLYTYKKMCRCFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...ACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTTAAACTTGTCCTTGTaGCACTTCAGAGCTTGGACT +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSLNLSL*HFRAWT
Trigger: AGTCCAAGCTCTGAAGTGTCACAAGGACAAGTTTAA...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTCATTTTCCAGAATCTaGACTACTGTCAGGATAGAC +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADSFSRI*TTVRID
Trigger: GTCTATCCTGACAGTAGTTCAGATTCTGGAAAATGA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTGCAGTAATTACAGCTaGTTTACAGCTGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSCSNYS*FTAVHS
Trigger: TGAGTGGACAGCTGTAAATCAGCTGTAATTACTGCA...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp ACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: TLYTYKKMCRCYRPPTPNILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...ATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCCCAATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: LFSGEFLAHSNKFSYTFPILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...TGGGAATGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATACGTATAAAAAGATGTaGAGGTGTTACAGACCACCT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADTYKKM*RCYRPP
Trigger: AGGTGGTCTGTAACACCTGCACATCTTTTTATACGT...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCCTGGCAAAGGCTTATaGGTCCCGATTTCACGAATA +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAPGKGL*VPISRI
Trigger: TATTCGTGAAATCGGGACCCATAAGCCTTTGCCAGG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTGGTTCTGGTTCACCTaGCTTGATTTCAGACTGGTG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAWFWFT*LDFRLV
Trigger: CACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATAAAATCCAAAATCTGTaGTTCTGGTTCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADKIQNL*FWFTWL
Trigger: AAGCCAGGTGAACCAGAACCACAGATTTTGGATTTT...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp AGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCACAGGAAAGTCATAGTCTACTaGGATCAGCAGCATTACAAA +
Preference number: 4 (lower is better)
Translates to: RERRDFEPQLSKELLIHRKVIVY*DQQHYK
Trigger: TTTGTAATGCTGCTGATCCCAGTAGACTATGACTTT...CCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 72 bp AAGTTCCCTCGTTGGAAAAATGCTAGCATGAATAGTTaGATAAATGCAATCCATCAGCAAAGGAGAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KFPRWKNASMNS*INAIHQQRRAS
Trigger: GCTTGCTCTCCTTTGCTGATGGATTGCATTTATCAAACTATTCATGCTAGCATTTTTCCAACGAGGGAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 72 bp AGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATaGATTCACAGGGATCTCCAAGATCATGCATTTGAA +
Preference number: 4 (lower is better)
Translates to: RRDFEPQLSKEL*IHRDLQDHAFE
Trigger: TTCAAATGCATGATCTTGGAGATCCCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGTTATACTGCTGGGTTTaGAAATCCAAAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMLYCWV*KSKICG
Trigger: ACCACAGATTTTGGATTTTCAAACCCAGCAGTATAA...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTATACTGCTGGGTTTaGAAATCCAAAATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADLYCWV*KSKICG
Trigger: ACCACAGATTTTGGATTTTCAAACCCAGCAGTATAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGATTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATTTACTTGTGTAATCTaGGGCTCTGTCATGATGCTC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEFTCVI*GSVMML
Trigger: GAGCATCATGACAGAGCCTCAGATTACACAAGTAAA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACCAAGTGTCACATCCTaGAAATCAAATGCATCAACC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEPSVTS*KSNAST
Trigger: GGTTGATGCATTTGATTTTCAGGATGTGACACTTGG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp AGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGTACTTCCTACTACTGTaGCAATTTAGCAATCCTTCA +
Preference number: 4 (lower is better)
Translates to: RCAGVTDHLHLIHFLSNKYFLLL*QFSNPS
Trigger: TGAAGGATTGCTAAATTGTCACAGTAGTAGGAAGTA...CTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TACCAGTTCCCCAGGATAGATAGATATTATGTCAGGTCCCAAGATAGGAGTTATAGAATATGTGAAATCTaGTTGTCCCAGAGTTACACT +
Preference number: 4 (lower is better)
Translates to: YQFPRIDRYYVRSQDRSYRICEI*LSQSYT
Trigger: AGTGTAACTCTGGGACAATCAGATTTCACATATTCT...ATAACTCCTATCTTGGGACCTGACATAATATCTATCTATCCTGGGGAACTGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp AACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTTGGCTTACAAAATTTTaGATCCAACAGACCCAAACT +
Preference number: 4 (lower is better)
Translates to: NLYIPGIPSTRIKRCAGVWLTKF*IQQTQT
Trigger: AGTTTGGGTCTGTTGGATTCAAAATTTTGTAAGCCA...AACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTCCAAGCTACCTCCTTaGTTTTTCTGTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSSKLPP*FFCESL
Trigger: AAGTGATTCACAGAAAAAGCAAGGAGGTAGCTTGGA...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGACTGTGTCATCAACTCTaGTTTGAGGTCACTAATTTT +
Preference number: 4 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGLCHQL*FEVTNF
Trigger: AAAATTAGTGACCTCAAAGCAGAGTTGATGACACAG...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp AACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTTGTAGTAGCAGCTACTaGTTGAAGACAACCTATATA +
Preference number: 4 (lower is better)
Translates to: NLYIPGIPSTRIKRCAGVCSSSY*LKTTYI
Trigger: TATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACA...AACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGTGTAGTAGCAGCTACTaGTTGAAGACAACCTATATA +
Preference number: 4 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMCSSSY*LKTTYI
Trigger: TATATAGGTTGTCTTCAAGCAGTAGCTGCTACTACA...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTTGAGAATGAACTCCTaGGTTTCAGGGTCATACGTG +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQALRMNS*VSGSYV
Trigger: CACGTATGACCCTGAAACCCAGGAGTTCATTCTCAA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTTCAGCATGTTTTCTCTaGGAATACGATGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITSACFL*EYDGCP
Trigger: TGGACAACCATCGTATTCCCAGAGAAAACATGCTGA...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATCAGCATGTTTTCTCTaGGAATACGATGGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSESACFL*EYDGCP
Trigger: TGGACAACCATCGTATTCCCAGAGAAAACATGCTGA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACAAAATCTGTGGTTCTaGTTCACCTGGCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEQNLWF*FTWLDF
Trigger: GAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCAATTTCTACTAATCTaGCTGCACGGAGTTTATATG +
Preference number: 4 (lower is better)
Translates to: RKRERRDFEPQLSKELLIQFLLI*LHGVYM
Trigger: CATATAAACTCCGTGCAGCCAGATTAGTAGAAATTG...AATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATCAATTTCTACTAATCTaGCTGCACGGAGTTTATATG +
Preference number: 4 (lower is better)
Translates to: SKKIPQNLSCTQALSEADQFLLI*LHGVYM
Trigger: CATATAAACTCCGTGCAGCCAGATTAGTAGAAATTG...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp CGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTTCTGAATGTGGAAGGTaGAAGATCACACATTTACTA +
Preference number: 4 (lower is better)
Translates to: RKRERRDFEPQLSKELLISECGR*KITHLL
Trigger: TAGTAAATGTGTGATCTTCCACCTTCCACATTCAGA...AATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
3UTR CAA 72 bp ACCAATGACCCACTTAAATTTAAGGCAAAAACACCCTaGAATCTAGGAATGTGCACATATGCAACAGCTAAC +
Preference number: 4 (lower is better)
Translates to: TNDPLKFKAKTP*NLGMCTYATAN
Trigger: GTTAGCTGTTGCATATGTGCACATTCCTAGATTCAAGGGTGTTTTTGCCTTAAATTTAAGTGGGTCATTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGAACTATTGCATGATTTaGAGTCTTTCCAAGCCCACC +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQANYCMI*SLSKPT
Trigger: GGTGGGCTTGGAAAGACTTCAAATCATGCAATAGTT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGATGGTTGTCCATTTTaGGGTAGCCATTGTCTATCT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQADGCPF*GSHCLS
Trigger: AGATAGACAATGGCTACCTCAAAATGGACAACCATC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTTGTCTAAAGAATTATTaGTTCACAGGGATCTCCAAG +
Preference number: 4 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSCLKNY*FTGISK
Trigger: CTTGGAGATCCCTGTGAATCAATAATTCTTTAGACA...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTATTTGGAAGACCACTaGAATGAGAATAGCCATGCC +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAYLEDH*NENSHA
Trigger: GGCATGGCTATTCTCATTGCAGTGGTCTTCCAAATA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR GCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATCCAAGCTACCTCCTTaGTTTTTCTGTGAATCACTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSESKLPP*FFCESL
Trigger: AAGTGATTCACAGAAAAAGCAAGGAGGTAGCTTGGA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTAAAATCCAAAATCTGTaGTTCTGGTTCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITKIQNL*FWFTWL
Trigger: AAGCCAGGTGAACCAGAACCACAGATTTTGGATTTT...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAAAAATCCAAAATCTGTaGTTCTGGTTCACCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEKIQNL*FWFTWL
Trigger: AAGCCAGGTGAACCAGAACCACAGATTTTGGATTTT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAACTCAAAGGTACAGCTTaGGGTGAAATTGACATAAAT +
Preference number: 4 (lower is better)
Translates to: LNSKKIPQNLSCTQALSELKGTA*GEIDIN
Trigger: ATTTATGTCAATTTCACCCCAAGCTGTACCTTTGAG...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTTTGAGGAGTTTTTCTaGAAAGAGCTTAACTACCAC +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAFEEFF*KELNYH
Trigger: GTGGTAGTTAAGCTCTTTTCAGAAAAACTCCTCAAA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR TCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTGTGTTTACTATCATaGACCATAGGAAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQALCLLS*TIGRST
Trigger: AGTACTTCTTCCTATGGTTCATGATAGTAAACACAG...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR GCA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGATCCTGAAAATCAAATaGATCAACCAAAGCAACAGC +
Preference number: 4 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAILKIK*INQSNS
Trigger: GCTGTTGCTTTGGTTGATGCATTTGATTTTCAGGAT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CCA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTAATAAGTTCCCTCGTTaGAAAAATGCTAGCATGAAT +
Preference number: 4 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITNKFPR*KNASMN
Trigger: ATTCATGCTAGCATTTTTCCAACGAGGGAACTTATT...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS CCA 90 bp ACGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCTGGAAGTCTaGGTCGTTCAGGATCATGTTCTCGATCTCTCGGCGGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: TLAASEEVQVLMLEV*VVQDHVLDLSAAPG
Trigger: ACCCGGCGCCGCCGAGAGATCGAGAACATGATCCTGAACGACCCAGACTTCCAGCATGAGGACTTGAACTTCCTCACTCGCAGCCAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
ENST00000588176.5
ENST00000591857.5
ENST00000592329.1
CDS GCA 90 bp GCCCATCTAGGACCCTATCCTTACCCTGGCTTGATTTCAGACTGGTaGCTCACAGCGCTGTATCGGATGGCAATGGTGCACGCCTTAGAC +
Preference number: 5 (lower is better)
Translates to: AHLGPYPYPGLISDW*LTALYRMAMVHALD
Trigger: GTCTAAGGCGTGCACCATTGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGGTAAGGATAGGGTCCTAGATGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS-3UTR CAA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACAGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: YRMAMVHALDRARAASPTGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCCCTGCTGCTCCGCAGTaGCCTGGTGAAGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGPAAPQ*PGEARW
Trigger: CCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAGG...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS CCA 90 bp ACTAGGCCTTTGGTACTGAGCCCATCTAGGACCCTATCCTTACCCTaGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTATCGGATGGC +
Preference number: 5 (lower is better)
Translates to: TRPLVLSPSRTLSLP*LDFRLVPHSAVSDG
Trigger: GCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGGTAAGGATAGGGTCCTAGATGGGCTCAGTACCAAAGGCCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS-3UTR CAA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: SPSCMRPQTGRHRQWPGVGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...CACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCACATCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: YRMAMVHALDRARAASPTSWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...TGTGGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS CCA 90 bp CTGTTAACTGATGTCCTGAGGTGGGTTACCCACAGACCCTCAATGTaGACTAACCGTGGCCCATTTCCGTCTGGGCGTAGGTGCCAATTA +
Preference number: 5 (lower is better)
Translates to: LLTDVLRWVTHRPSM*TNRGPFPSGRRCQL
Trigger: TAATTGGCACCTACGCCCAGACGGAAATGGGCCACGGTTAGTCCACATTGAGGGTCTGTGGGTAACCCACCTCAGGACATCAGTTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS-3UTR CAA 90 bp GGAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGATCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: GGEDCSEVEIAPLHSRLGSWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...TCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR CAA 90 bp ATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATTCTGGTTCACCTGGCTaGATTTCAGACTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: MRPQTGRHRQWPGVERVYSGSPG*ISDWCL
Trigger: GAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGA...ATAAACTCTTTCCACTCCTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSRLSGL*ISTMVG
Trigger: GCCAACCATGGTGGATATCAACAGCCCCGAAAGCCT...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGRLSGL*ISTMVG
Trigger: GCCAACCATGGTGGATATCAACAGCCCCGAAAGCCT...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp GCTCCCCTGAAGGAAATCCCCCGCGTTCTGACTGATTCCATACAGAGAATACAGGTGACACTTCAGAGCTaGGACTGCAGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: APLKEIPRVLTDSIQRIQVTLQS*DCSDFR
Trigger: CCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCAC...CTGTATTCTCTGTATGGAATCAGTCAGAACGCGGGGGATTTCCTTCAGGGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TCTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACCTGCTGCTCCGCAGTaGCCTGGTGAAGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: SKSEHQQDSWSQVISFLAPAAPQ*PGEARW
Trigger: CCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAGG...TGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTTCTGGTTCACCTGGCTaGATTTCAGACTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: STRLLVSGHQFPGTPPLSSGSPG*ISDWCL
Trigger: GAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGA...AGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp GAGGTGAAGATTGCAGTGAAGTCGAGATCGCACCATTGCATTCCCGCCTGGGAGTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: EVKIAVKSRSHHCIPAWEYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...CTCCCAGGCGGGAATGCAATGGTGCGATCTCGACTTCACTGCAATCTTCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000587927.5
CDS-3UTR CAA 90 bp TTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACATTCCCACCTGCTGCTCCGCAGTaGCCTGGTGAAGCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: LFSGEFLAHSNKFSYTFPPAAPQ*PGEARW
Trigger: CCACCTTGCTTCACCAGGCAACTGCGGAGCAGCAGG...TGGGAATGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCGGGAAAGGAGGGATTTaGAGCCGCAGTTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSGKGGI*SRSCLK
Trigger: CTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCC...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS TCA 90 bp CATTTCCGTCTGGGCGTAGGTGCCAATTATCTGGAGTCCTTTGGATaGAAGCAGCCATTTCTCTTTCTGAGCAGTGGTGCCCTGATTCAG +
Preference number: 5 (lower is better)
Translates to: HFRLGVGANYLESFG*KQPFLFLSSGALIQ
Trigger: CTGAATCAGGGCACCACTGCTCAGAAAGAGAAATGGCTGCTTTCATCCAAAGGACTCCAGATAATTGGCACCTACGCCCAGACGGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301608.8
ENST00000573078.5
ENST00000576743.1
ENST00000588176.5
CDS-3UTR CAA 90 bp ACCACAAGCCATCCGACATGCTTCAATGCCAGTGTTTGCAGTCCAGGAGGTGAAGTCACAGTAGGACTGTaGAGAATGAACTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: TTSHPTCFNASVCSPGGEVTVGL*RMNSWV
Trigger: AACCCAGGAGTTCATTCTCAACAGTCCTACTGTGAC...TTCACCTCCTGGACTGCAAACACTGGCATTGAAGCATGTCGGATGGCTTGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CTGTATCGGATGGCAATGGTGCACGCCTTAGACAGAGCCCGAGCAGCTTCTCCCTTTATACTGCTGGGTTaGAAAATCCAAAATCTGTGG +
Preference number: 5 (lower is better)
Translates to: LYRMAMVHALDRARAASPFILLG*KIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAA...GGGAGAAGCTGCTCGGGCTCTGTCTAAGGCGTGCACCATTGCCATCCGATACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAAT +
Preference number: 5 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSFTQVP*TNAFVN
Trigger: ATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAA...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp AAGATGGATGGAATAACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: KMDGITRKRERRDFEPQLRLSGL*ISTMVG
Trigger: GCCAACCATGGTGGATATCAACAGCCCCGAAAGCCT...CAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGTTATTCCATCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp GCTTGGACTGCAGTGACTTCAGGTGCTTGTAAGATTCGTGGACCTCTGCTTTGTTCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: AWTAVTSGACKIRGPLLCSWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...ACAAAGCAGAGGTCCACGAATCTTACAAGCACCTGAAGTCACTGCAGTCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp GACAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGTGACACTTCAGAGCTaGGACTGCAGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: DKHHGPVSQLVTQRFHVCVTLQS*DCSDFR
Trigger: CCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCAC...ACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp ATTGCATTCCCGCCTGGGAGACTCCATAGGCGCTTTCTGAAGCAGATTAAACTTGTGACACTTCAGAGCTaGGACTGCAGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: IAFPPGRLHRRFLKQIKLVTLQS*DCSDFR
Trigger: CCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCAC...AAGTTTAATCTGCTTCAGAAAGCGCCTATGGAGTCTCCCAGGCGGGAATGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587927.5
CDS-3UTR CAA 90 bp AGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTCACAGGAGGAGGGAGGACCATTaGAACCCGGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: RERRDFEPQLSKELLIHRRREDH*NPGGRG
Trigger: ACCTCTGCCTCCCGGGTTCAAATGGTCCTCCCTCCT...CCTGTGAATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGGCTGGGCAAGAACTATaGCATGATTTGAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQAGQEL*HDLKSF
Trigger: GAAAGACTTCAAATCATGCAATAGTTCTTGCCCAGC...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CAAAATCTGTGGTTCTGGTTCACCTGGCTTGATTTCAGACTGGTGCCTCACAGCTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAAT +
Preference number: 5 (lower is better)
Translates to: QNLWFWFTWLDFRLVPHSFTQVP*TNAFVN
Trigger: ATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAA...GCTGTGAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGAACCACAGATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAAT +
Preference number: 5 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGFTQVP*TNAFVN
Trigger: ATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAA...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp AAGATGGATGGAATAACTCGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: KMDGITRKRERRDFEPQLGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...CAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCGAGTTATTCCATCCATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CAA 90 bp CATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTCGGGGTTTCACCATGTaGGCCAGGATGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: HTLYTYKKMCRCYRPPTPRGFTM*ARMVSN
Trigger: GTTTGAGACCATCCTGGCCAACATGGTGAAACCCCG...AGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACATGTAATCCCAACCCTTaGGGAGGCCTGAGGTGGGAG +
Preference number: 5 (lower is better)
Translates to: QTPSDPAQIFICEQGISTCNPNP*GGLRWE
Trigger: CTCCCACCTCAGGCCTCCCAAAGGGTTGGGATTACA...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CAAACACCATGGTCCCGTAAGTCAGCTTGTTACTCAGCGGTTTCACGTATGTGCTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: QTPWSRKSACYSAVSRMCYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...GCACATACGTGAAACCGCTGAGTAACAAGCTGACTTACGGGACCATGGTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TTCGTTAATCCGGTGATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: FVNPVIGLLHVCAHKLEGYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...GCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTATCACCGGATTAACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CTAAGTCAGAACATCAACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: LSQNINKTLGLRSSVSWHSWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...GTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGTTGATGTTCTGACTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp ACAAGACTCTTGGTCTCAGGTCATCAGTTTCCTGGCACTCCTCCTCTCTCTAGCACATCAACAAGACTCTaGGTCTCAGGTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: TRLLVSGHQFPGTPPLSSTSTRL*VSGHQF
Trigger: AAACTGATGACCTGAGACCAAGAGTCTTGTTGATGT...GCTAGAGAGAGGAGGAGTGCCAGGAAACTGATGACCTGAGACCAAGAGTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CAA 90 bp ATAGGTCTCCTTCATGTATGCGCCCACAAACTGGAAGGCATAGGCAGTGGCCAGTTTATACTGCTGGGTTaGAAAATCCAAAATCTGTGG +
Preference number: 5 (lower is better)
Translates to: IGLLHVCAHKLEGIGSGQFILLG*KIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAA...CTGGCCACTGCCTATGCCTTCCAGTTTGTGGGCGCATACATGAAGGAGACCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACAGTGACACTTCAGAGCTaGGACTGCAGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: QTPSDPAQIFICEQGISTVTLQS*DCSDFR
Trigger: CCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCAC...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTGAGAACAAACTGGACTaGCCACTTCCTTTAAGGTAC +
Preference number: 5 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPENKLD*PLPLRY
Trigger: GTACCTTAAAGGAAGTGGCAAGTCCAGTTTGTTCTC...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp GGCAAAGGCTTATGGGTCCCGATTTCACGAATAGGTACGATAAAGGCATGTAATGTCACAGTAGGACTGTaGAGAATGAACTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: GKGLWVPISRIGTIKACNVTVGL*RMNSWV
Trigger: AACCCAGGAGTTCATTCTCAACAGTCCTACTGTGAC...ATTACATGCCTTTATCGTACCTATTCGTGAAATCGGGACCCATAAGCCTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp GGCATAGGCAGTGGCCAGGAGTGGAAAGAGTTTATACTGCTGGGTTTGAAAATCAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: GIGSGQEWKEFILLGLKIKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...GATTTTCAAACCCAGCAGTATAAACTCTTTCCACTCCTGGCCACTGCCTATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: HTLYTYKKMCRCYRPPTPYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...AGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CAA 90 bp TGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGGGAAAGGAGGGATTTaGAGCCGCAGTTGTCTAAAG +
Preference number: 5 (lower is better)
Translates to: CAGVTDHLHLIHFLSNKMGKGGI*SRSCLK
Trigger: CTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCC...CATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588968.5
CDS-3UTR CAA 90 bp GACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTCGGCCAAAGCCCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: DHLHLIHFLSNKMDGITRPKPSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGGCTTTGG...CCGAGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588968.5
CDS-3UTR CAA 90 bp CATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTGCTGGGCAAGAACTATaGCATGATTTGAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: HTLYTYKKMCRCYRPPTPAGQEL*HDLKSF
Trigger: GAAAGACTTCAAATCATGCAATAGTTCTTGCCCAGC...AGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTCACTCAGGTCCCCTaGACCAATGCCTTCGTTAAT +
Preference number: 5 (lower is better)
Translates to: SKKIPQNLSCTQALSEADFTQVP*TNAFVN
Trigger: ATTAACGAAGGCATTGGTCAAGGGGACCTGAGTGAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGAGGCTTTCGGGGCTGTaGATATCCACCATGGTTGGC +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQARLSGL*ISTMVG
Trigger: GCCAACCATGGTGGATATCAACAGCCCCGAAAGCCT...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGACCACCTGCTAGCATGAATAGTTaGATAAATGCAATCCATCAG +
Preference number: 5 (lower is better)
Translates to: PRHTLYTYKKMCRCYRPPASMNS*INAIHQ
Trigger: CTGATGGATTGCATTTATCAAACTATTCATGCTAGC...AGGTGGTCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTCTGGTTCACCTGGCTaGATTTCAGACTGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQASGSPG*ISDWCL
Trigger: GAGGCACCAGTCTGAAATCAAGCCAGGTGAACCAGA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGGCAATGTGCCTCACTaGCTCGAACAAGGTCAACAG +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAGNVPH*LEQGQQ
Trigger: CTGTTGACCTTGTTCGAGCAAGTGAGGCACATTGCC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp CGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RKRERRDFEPQLSKELLIYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...AATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAATCGTGGACCTCTGCTTaGTTCAGTGGGGAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: LNSKKIPQNLSCTQALSESWTSA*FSGEFL
Trigger: TAAGAACTCCCCACTGAACAAAGCAGAGGTCCACGA...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGTGACACTTCAGAGCTaGGACTGCAGTGACTTCAGG +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAVTLQS*DCSDFR
Trigger: CCTGAAGTCACTGCAGTCCAAGCTCTGAAGTGTCAC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TCTGCTTTGTTCAGTGGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATACACAAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: SALFSGEFLAHSNKFSYTKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...TGTGTATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAACTGAGCAGGAAAGCTaGGAAGGGTTCTACACCACT +
Preference number: 5 (lower is better)
Translates to: LNSKKIPQNLSCTQALSETEQES*EGFYTT
Trigger: AGTGGTGTAGAACCCTTCCAAGCTTTCCTGCTCAGT...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGTCACAGTAGGACTGTaGAGAATGAACTCCTGGGTT +
Preference number: 5 (lower is better)
Translates to: LNSKKIPQNLSCTQALSEVTVGL*RMNSWV
Trigger: AACCCAGGAGTTCATTCTCAACAGTCCTACTGTGAC...TTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp GGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAGAACTATTGCATGATTaGAAGTCTTTCCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: GVTDHLHLIHFLSNKMDGELLHD*KSFQAH
Trigger: GTGGGCTTGGAAAGACTTCAAATCATGCAATAGTTC...TCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CGGAAAAGGGAAAGGAGGGATTTTGAGCCGCAGTTGTCTAAAGAATTATTGATTACATCAACAAGACTCTaGGTCTCAGGTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: RKRERRDFEPQLSKELLITSTRL*VSGHQF
Trigger: AAACTGATGACCTGAGACCAAGAGTCTTGTTGATGT...AATCAATAATTCTTTAGACAACTGCGGCTCAAAATCCCTCCTTTCCCTTTTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CAAACACCCTCAGATCCTGCCCAGATATTCATCTGTGAACAAGGTATTTCAACAGAACGATTAAGGCTTTaGTCAACATGTAGCATTTCT +
Preference number: 5 (lower is better)
Translates to: QTPSDPAQIFICEQGISTERLRL*STCSIS
Trigger: AGAAATGCTACATGTTGACAAAAGCCTTAATCGTTC...TGTTGAAATACCTTGTTCACAGATGAATATCTGGGCAGGATCTGAGGGTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp CAACCTATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTATGGCTTACAAAATTTaGAATCCAACAGACCCAAAC +
Preference number: 5 (lower is better)
Translates to: QPIYPRHTLYTYKKMCRCMAYKI*NPTDPN
Trigger: GTTTGGGTCTGTTGGATTCAAAATTTTGTAAGCCAT...ACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATATAGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp ATAAAAAGATGTGCAGGTGTTACAGACCACCTACACCTAATTCACTTCCTTTCTAAGGCAAAAACACCCTaGAATCTAGGAATGTGCACA +
Preference number: 5 (lower is better)
Translates to: IKRCAGVTDHLHLIHFLSKAKTP*NLGMCT
Trigger: TGTGCACATTCCTAGATTCAAGGGTGTTTTTGCCTT...AGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGTAACACCTGCACATCTTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp ATATATCCCAGGCATACCCTCTACACGTATAAAAAGATGTGCAGGTGTTACAGATTTATACTGCTGGGTTaGAAAATCCAAAATCTGTGG +
Preference number: 5 (lower is better)
Translates to: IYPRHTLYTYKKMCRCYRFILLG*KIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAA...TCTGTAACACCTGCACATCTTTTTATACGTGTAGAGGGTATGCCTGGGATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGCTTTCTGAAGCAGATTTTATACTGCTGGGTTaGAAAATCCAAAATCTGTGG +
Preference number: 5 (lower is better)
Translates to: SKKIPQNLSCTQALSEADFILLG*KIQNLW
Trigger: CCACAGATTTTGGATTTTCAAACCCAGCAGTATAAA...ATCTGCTTCAGAAAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGTACACGCTGGTTTACTaGTGTAATCTGAGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAYTLVY*CNLRLC
Trigger: ACAGAGCCTCAGATTACACAAGTAAACCAGCGTGTA...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp ACAGACCACCTACACCTAATTCACTTCCTTTCTAATAAGATGGATGGAATAACTAAGATTCCACAAAATTaGAGTTGCACACAGGCGCTT +
Preference number: 5 (lower is better)
Translates to: TDHLHLIHFLSNKMDGITKIPQN*SCTQAL
Trigger: AAGCGCCTGTGTGCAACTCAAATTTTGTGGAATCTT...AGTTATTCCATCCATCTTATTAGAAAGGAAGTGAATTAGGTGTAGGTGGTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000293217.10
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGAACTATTGCATGATTaGAAGTCTTTCCAAGCCCAC +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAELLHD*KSFQAH
Trigger: GTGGGCTTGGAAAGACTTCAAATCATGCAATAGTTC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS-3UTR CAA 90 bp TATAGCTATTTGAATTCGAAAAAGATTCCACAAAATTTGAGTTGCACACAGGCGGCTGGGCAAGAACTATaGCATGATTTGAAGTCTTTC +
Preference number: 5 (lower is better)
Translates to: YSYLNSKKIPQNLSCTQAAGQEL*HDLKSF
Trigger: GAAAGACTTCAAATCATGCAATAGTTCTTGCCCAGC...CGCCTGTGTGCAACTCAAATTTTGTGGAATCTTTTTCGAATTCAAATAGCTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
CDS CCA 72 bp TGGCGGAATCCCGCTCCCTGCGCAGGTCCGGGTTCATaGCGACGACCAGCTGGCAGCGAAGTAAGCACCGAC +
Preference number: 6 (lower is better)
Translates to: WRNPAPCAGPGS*RRPAGSEVSTD
Trigger: GTCGGTGCTTACTTCGCTGCCAGCTGGTCGTCGCCATGAACCCGGACCTGCGCAGGGAGCGGGATTCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
ENST00000588176.5
ENST00000589301.1
CDS CAA 72 bp GGGCTGCCGTCCAGGATGTGTGTAAGCAGCTCCGGGTaGAAGCTGGCGGAATCCCGCTCCCTGCGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLPSRMCVSSSG*KLAESRSLRRS
Trigger: GGACCTGCGCAGGGAGCGGGATTCCGCCAGCTTCAACCCGGAGCTGCTTACACACATCCTGGACGGCAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000572047.5
ENST00000573078.5
ENST00000588176.5
ENST00000589301.1
ENST00000591857.5
CDS CAA 90 bp GTTTTCTCGGGGCTGCCGTCCAGGATGTGTGTAAGCAGCTCCGGGTaGAAGCTGGCGGAATCCCGCTCCCTGCGCAGGTCCGGGTTCATG +
Preference number: 6 (lower is better)
Translates to: VFSGLPSRMCVSSSG*KLAESRSLRRSGFM
Trigger: CATGAACCCGGACCTGCGCAGGGAGCGGGATTCCGCCAGCTTCAACCCGGAGCTGCTTACACACATCCTGGACGGCAGCCCCGAGAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
ENST00000588176.5
ENST00000589301.1
ENST00000591857.5
CDS TCA 72 bp AGCTGGCAGCGAAGTAAGCACCGACCGAGGTGGCAGTaGCAATCTAAATCCGCAGCTCCAGCGCCGGCCGGA +
Preference number: 6 (lower is better)
Translates to: SWQRSKHRPRWQ*QSKSAAPAPAG
Trigger: TCCGGCCGGCGCTGGAGCTGCGGATTTAGATTGTCACTGCCACCTCGGTCGGTGCTTACTTCGCTGCCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000293217.10
ENST00000588176.5
CDS CCA 72 bp GATGTCCTGAGGTGGGTTACCCACAGACCCTCAATGTaGACTAACCGTGGCCCATTTCCGTCTGGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: DVLRWVTHRPSM*TNRGPFPSGRR
Trigger: CCTACGCCCAGACGGAAATGGGCCACGGTTAGTCCACATTGAGGGTCTGTGGGTAACCCACCTCAGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576743.1
CDS CCA 72 bp CGCTGGCTGCGAGTGAGGAAGTTCAAGTCCTCATGCTaGAAGTCTGGGTCGTTCAGGATCATGTTCTCGATC +
Preference number: 6 (lower is better)
Translates to: RWLRVRKFKSSC*KSGSFRIMFSI
Trigger: GATCGAGAACATGATCCTGAACGACCCAGACTTCCAGCATGAGGACTTGAACTTCCTCACTCGCAGCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000293217.10
ENST00000301608.8
ENST00000573078.5
ENST00000588176.5
ENST00000591857.5
ENST00000592329.1
CDS CCA 72 bp CTAGGACCCTATCCTTACCCTGGCTTGATTTCAGACTaGTGCCTCACAGCGCTGTATCGGATGGCAATGGTG +
Preference number: 6 (lower is better)
Translates to: LGPYPYPGLISD*CLTALYRMAMV
Trigger: CACCATTGCCATCCGATACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGGTAAGGATAGGGTCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS CCA 72 bp TTGGTACTGAGCCCATCTAGGACCCTATCCTTACCCTaGCTTGATTTCAGACTGGTGCCTCACAGCGCTGTA +
Preference number: 6 (lower is better)
Translates to: LVLSPSRTLSLP*LDFRLVPHSAV
Trigger: TACAGCGCTGTGAGGCACCAGTCTGAAATCAAGCCAGGGTAAGGATAGGGTCCTAGATGGGCTCAGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS CAA 72 bp GAATTCTGGGATCTGAATGGGGTAAAAACTAGGCCTTaGGTACTGAGCCCATCTAGGACCCTATCCTTACCC +
Preference number: 6 (lower is better)
Translates to: EFWDLNGVKTRP*VLSPSRTLSLP
Trigger: GGGTAAGGATAGGGTCCTAGATGGGCTCAGTACCAAAGGCCTAGTTTTTACCCCATTCAGATCCCAGAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS CAA 90 bp GACATTTGGGAATTCTGGGATCTGAATGGGGTAAAAACTAGGCCTTaGGTACTGAGCCCATCTAGGACCCTATCCTTACCCTGGCTTGAT +
Preference number: 6 (lower is better)
Translates to: DIWEFWDLNGVKTRP*VLSPSRTLSLPWLD
Trigger: ATCAAGCCAGGGTAAGGATAGGGTCCTAGATGGGCTCAGTACCAAAGGCCTAGTTTTTACCCCATTCAGATCCCAGAATTCCCAAATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589744.1
CDS CCA 72 bp TTTATTTCTCCACCCAAAGCCCTCTGCTTTGTTCAGTaGGGAGTTCTTAGCCCACTCAAACAAGTTTTCATA +
Preference number: 6 (lower is better)
Translates to: FISPPKALCFVQ*GVLSPLKQVFI
Trigger: TATGAAAACTTGTTTGAGTGGGCTAAGAACTCCCCACTGAACAAAGCAGAGGGCTTTGGGTGGAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588968.5