RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000119673

Ensembl transcript IDs: ENST00000238651.10, ENST00000538782.2, ENST00000613168.1

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGAAGTAAGAAGGCAAATAATTCTGTGTCTGGAATTGGTTCCTTCTaGTGGATTCTTGGTCTCGCTGACATCAAGAATGAAGCCGCAGAC +
Preference number: 5 (lower is better)
Translates to: GSKKANNSVSGIGSF*WILGLADIKNEAAD
Trigger: GTCTGCGGCTTCATTCTTGATGTCAGCGAGACCAAGAATCCACCAGAAGGAACCAATTCCAGACACAGAATTATTTGCCTTCTTACTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS TCA 90 bp CTTAATACAGTTCTGAAAAGTAGTGTGTCTGGAGTTTGTTTCCTCTaGTGTTCAGATGCGTCCGGAATGTGTTCCTTCTGGTGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: LNTVLKSSVSGVCFL*CSDASGMCSFWWVH
Trigger: ATGAACCCACCAGAAGGAACACATTCCGGACGCATCTGAACATCAGAGGAAACAAACTCCAGACACACTACTTTTCAGAACTGTATTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS CCA 72 bp GACCCCAGGAACTGCGCCGAACTCTTCAGGCTCCATTaGTACAGCCGGGACGCTCGAAGGACAGCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: DPRNCAELFRLH*YSRDARRTAGD
Trigger: ATCTCCTGCTGTCCTTCGAGCGTCCCGGCTGTACCAATGGAGCCTGAAGAGTTCGGCGCAGTTCCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238651.10
ENST00000538782.2
ENST00000613168.1
CDS CAA 72 bp AGACCCCAGGAACTGCGCCGAACTCTTCAGGCTCCATaGGTACAGCCGGGACGCTCGAAGGACAGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: RPQELRRTLQAP*VQPGRSKDSRR
Trigger: TCTCCTGCTGTCCTTCGAGCGTCCCGGCTGTACCAATGGAGCCTGAAGAGTTCGGCGCAGTTCCTGGGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000238651.10
ENST00000538782.2
ENST00000613168.1
CDS CAA 90 bp AGGCAAATAATTCTGTGTCTGGAATTGGTTCCTTCTGGTGGATTCTaGGTCTCGCTGACATCAAGAATGAAGCCGCAGACCCTCGCAGTG +
Preference number: 6 (lower is better)
Translates to: RQIILCLELVPSGGF*VSLTSRMKPQTLAV
Trigger: CACTGCGAGGGTCTGCGGCTTCATTCTTGATGTCAGCGAGACCAAGAATCCACCAGAAGGAACCAATTCCAGACACAGAATTATTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS TCA 72 bp GGAGTGAAGCTGTATACCTTCACGGTGTTACAGCTCTaGAATGCAGTATGGACCCAAAGAAGGAGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: GVKLYTFTVLQL*NAVWTQRRSSS
Trigger: GCTACTGCTCCTTCTTTGGGTCCATACTGCATTTCAGAGCTGTAACACCGTGAAGGTATACAGCTTCACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS CCA 72 bp CAGCAGGTCCAGAGTTGTTTTTCTTGTTCCTCTCAGTaGGTTCATGGTCTTGGCTTCAGGAGTGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: QQVQSCFSCSSQ*VHGLGFRSEAV
Trigger: TACAGCTTCACTCCTGAAGCCAAGACCATGAACCCACTGAGAGGAACAAGAAAAACAACTCTGGACCTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS CAA 72 bp CAGCTCATAAAGGCAGCAGGTCCAGAGTTGTTTTTCTaGTTCCTCTCAGTGGGTTCATGGTCTTGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: QLIKAAGPELFF*FLSVGSWSWLQ
Trigger: CTGAAGCCAAGACCATGAACCCACTGAGAGGAACAAGAAAAACAACTCTGGACCTGCTGCCTTTATGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS CAA 72 bp ATTCTGTGTCTGGAATTGGTTCCTTCTGGTGGATTCTaGGTCTCGCTGACATCAAGAATGAAGCCGCAGACC +
Preference number: 6 (lower is better)
Translates to: ILCLELVPSGGF*VSLTSRMKPQT
Trigger: GGTCTGCGGCTTCATTCTTGATGTCAGCGAGACCAAGAATCCACCAGAAGGAACCAATTCCAGACACAGAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538782.2
CDS TCA 72 bp GTTCTGAAAAGTAGTGTGTCTGGAGTTTGTTTCCTCTaGTGTTCAGATGCGTCCGGAATGTGTTCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: VLKSSVSGVCFL*CSDASGMCSFW
Trigger: CCAGAAGGAACACATTCCGGACGCATCTGAACATCAGAGGAAACAAACTCCAGACACACTACTTTTCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538782.2