RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOT13 (Homo sapiens)

Ensembl gene IDs: ENSG00000112304

Ensembl transcript IDs: ENST00000230048.5, ENST00000476436.1, ENST00000537591.5

Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTaGGAAGGCACCATCTATGAGCCAGGAAGCGGGCCCTCACCTAAC +
Preference number: 1 (lower is better)
Translates to: KNENPEGSLAPSTTQ*EGTIYEPGSGPSPN
Trigger: GTTAGGTGAGGGCCCGCTTCCTGGCTCATAGATGGTGCCTTCTCACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 90 bp ACCATCTATGAGCCAGGAAGCGGGCCCTCACCTAACAGGATCTGCTaGGCCTTGACCCAGGACTTTCCAGCTTCTAGAACCATGAAAAAT +
Preference number: 1 (lower is better)
Translates to: TIYEPGSGPSPNRIC*ALTQDFPASRTMKN
Trigger: ATTTTTCATGGTTCTAGAAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGAGGGCCCGCTTCCTGGCTCATAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 90 bp GAAGTTATTAGATCACGAGGGCAGAACCCTCAAGATTGGAGTAAGTaGCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACACC +
Preference number: 1 (lower is better)
Translates to: EVIRSRGQNPQDWSK*PYKREPRLGTLAHT
Trigger: GGTGTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATCTTGAGGGTTCTGCCCTCGTGATCTAATAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 90 bp TGGGATTTTGAGGCTATGGGAAGCTGTGATTGTATCACTCCAGCCTaGGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTG +
Preference number: 1 (lower is better)
Translates to: WDFEAMGSCDCITPA*VTEAVSECHSQLNL
Trigger: CAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAGGCTGGAGTGATACAATCACAGCTTCCCATAGCCTCAAAATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 90 bp GTGGGAAATACTAGAAGTAAACATCTGGGACTCCTGTATGCTCACTaGTGCTATTGCTACTGTGGAGTCTTCTGCCCTTTCACAGTGGAC +
Preference number: 1 (lower is better)
Translates to: VGNTRSKHLGLLYAH*CYCYCGVFCPFTVD
Trigger: GTCCACTGTGAAAGGGCAGAAGACTCCACAGTAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGATGTTTACTTCTAGTATTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 90 bp GCCCTATGTGTGGTACTTACTACTAGCAATCTCTGGGAAGCAATGTaGAAATACCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTT +
Preference number: 1 (lower is better)
Translates to: ALCVVLTTSNLWEAM*KYPVPLSGAPLAIL
Trigger: AAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAGATTGCTAGTAGTAAGTACCACACATAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 90 bp AGTATACTCTCCATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTaGTCAAGGTGTCCTGGTTTTGCCCTATGTGTGGTACTTACTACT +
Preference number: 1 (lower is better)
Translates to: SILSICSSLMLLLSA*SRCPGFALCVVLTT
Trigger: AGTAGTAAGTACCACACATAGGGCAAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATGGAGAGTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 90 bp GTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCTGAGAAGTaGACTTGGTCTTTTCAATACTATAGACTTGGAGGTTTGAGATCT +
Preference number: 1 (lower is better)
Translates to: VSECHSQLNLETSEK*TWSFQYYRLGGLRS
Trigger: AGATCTCAAACCTCCAAGTCTATAGTATTGAAAAGACCAAGTTCACTTCTCAGAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 90 bp ATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTaGTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCT +
Preference number: 1 (lower is better)
Translates to: IVYSCLTPFSSILSI*SSLMLLLSAWSRCP
Trigger: AGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 90 bp TGTCAGCTTTCAACAGTTAGCAACCTGGCCTTATGCCTTGCTTCATaGGAAAGGGCCATTCTTAAATTTCAAAATGCTTTCATGTGTCCT +
Preference number: 1 (lower is better)
Translates to: CQLSTVSNLALCLAS*ERAILKFQNAFMCP
Trigger: AGGACACATGAAAGCATTTTGAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 90 bp AACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAGCAACCTaGCCTTATGCCTTGCTTCATGGGAAAGGGCCATTCTTAAATTTC +
Preference number: 1 (lower is better)
Translates to: NRNQEHTVSFQQLAT*PYALLHGKGPFLNF
Trigger: GAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 90 bp TCAAGAACATACTGTCAGCTTTCAACAGTTAGCAACCTGGCCTTATaGCTTGCTTCATGGGAAAGGGCCATTCTTAAATTTCAAAATGCT +
Preference number: 1 (lower is better)
Translates to: SRTYCQLSTVSNLAL*LASWERAILKFQNA
Trigger: AGCATTTTGAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGACAGTATGTTCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCGAGCCGAGATCGTGCTaGTGTACTCCAGCCTGGGCA +
Preference number: 2 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFEPRSC*CTPAWA
Trigger: TGCCCAGGCTGGAGTACAGCAGCACGATCTCGGCTC...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAACCCAGAGGGCTCACTTaGCCCTTCCACCACACAGTG +
Preference number: 2 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQPRGLT*PFHHTV
Trigger: CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGG...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 90 bp TATGAGCCAGGAAGCGGGCCCTCACCTAACAGGATCTGCTGGGCCTaGACCCAGGACTTTCCAGCTTCTAGAACCATGAAAAATTTCTGT +
Preference number: 2 (lower is better)
Translates to: YEPGSGPSPNRICWA*TQDFPASRTMKNFC
Trigger: ACAGAAATTTTTCATGGTTCTAGAAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGAGGGCCCGCTTCCTGGCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCCACCTTTACCCTACTTaGTATCCAGGTCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTHLYPT*YPGPFP
Trigger: AGGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTG...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAACCCAGCCTCAAGCCCTaGAGTCAGCTGTTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQPSLKP*SQLFLQ
Trigger: TTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGG...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACGCCTGGCCAACATGGTaGACCCTGTTTCTACAAAAA +
Preference number: 2 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHAWPTW*TLFLQK
Trigger: TTTTTGTAGAAACAGGGTTCACCATGTTGGCCAGGC...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCGATTGGCCATTGCTGTaGTCTCCATGTGTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFDWPLL*SPCVSP
Trigger: AGGGGAAACACATGGAGACCACAGCAATGGCCAATC...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCTCACCTAACAGGATCTaGTGGGCCTTGACCCAGGAC +
Preference number: 2 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSSPNRI*WALTQD
Trigger: GTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGA...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCAGATTCGCTAAGGATTaGCCATTGCTGTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFRFAKD*PLLWSP
Trigger: TGGAGACCACAGCAATGGCCAATCCTTAGCGAATCT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCACCTTTACCCTACTTaGTATCCAGGTCCTTTTCCT +
Preference number: 2 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFHLYPT*YPGPFP
Trigger: AGGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACACAAGATGCTTAAAGTaGAAAAAGACACCCCCACCT +
Preference number: 2 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHTRCLK*KKTPPP
Trigger: AGGTGGGGGTGTCTTTTTTCACTTTAAGCATCTTGT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTGGATCTGCTGGGCCTTaGCCCAGGACTTTCCAGCTT +
Preference number: 2 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVGSAGP*PRTFQL
Trigger: AAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCC...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTGAAGCTGTCTCAGAGTaGCACAGTCAACTGAACTTG +
Preference number: 2 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFEAVSE*HSQLNL
Trigger: CAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTC...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTCTGGGACTCCTGTATaGTCACTGCTGCTATTGCTA +
Preference number: 2 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFSGTPV*SLLLLL
Trigger: TAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCCTGGTCAAGGTGTCCTaGTTTTGCCCTATGTGTGGT +
Preference number: 2 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSLVKVS*FCPMCG
Trigger: ACCACACATAGGGCAAAACCAGGACACCTTGACCAG...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTTTGAGCCTAGGAGTTTaGGACGAGGCTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVLSLGV*DEAGQQ
Trigger: CTGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAA...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCCCAGGGGGCAGAGATTaGAGTGAGCCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAPGGRD*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAATCTCTGCCCCCTGG...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTTCTGCCCTTTCACAGTaGACAGATCAGCAGGCGATC +
Preference number: 2 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVSALSQ*TDQQAI
Trigger: GATCGCCTGCTGATCTGTCCACTGTGAAAGGGCAGA...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 90 bp TGGGAAGCAATGTGCAAATACCCTGTTCCTTTATCAGGAGCTCCCTaGGCGATTCTTTCCAGACTAAAACCCAAACCAGTCTTTAACTAT +
Preference number: 2 (lower is better)
Translates to: WEAMCKYPVPLSGAP*AILSRLKPKPVFNY
Trigger: ATAGTTAAAGACTGGTTTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGGTATTTGCACATTGCTTCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATTGAGCCTAGGAGTTTaGGACGAGGCTGGGCAACAG +
Preference number: 2 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLLSLGV*DEAGQQ
Trigger: CTGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTGGAGGTTTGAGATCTaGATGGTTTTATTCTCGGTA +
Preference number: 2 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFWRFEI*MVLFSV
Trigger: TACCGAGAATAAAACCATGCAGATCTCAAACCTCCA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTATAGACTTGGAGGTTTaGGATCTGCATGGTTTTATT +
Preference number: 2 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFIDLEV*DLHGFI
Trigger: AATAAAACCATGCAGATCTCAAACCTCCAAGTCTAT...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGAGACTTCTGAGAAGTaGACTTGGTCTTTTCAATAC +
Preference number: 2 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSETSEK*TWSFQY
Trigger: GTATTGAAAAGACCAAGTTCACTTCTCAGAAGTCTC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTCTGGGACTCCTGTATaGTCACTGCTGCTATTGCTA +
Preference number: 2 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLSGTPV*SLLLLL
Trigger: TAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 90 bp GAACATACTGTCAGCTTTCAACAGTTAGCAACCTGGCCTTATGCCTaGCTTCATGGGAAAGGGCCATTCTTAAATTTCAAAATGCTTTCA +
Preference number: 2 (lower is better)
Translates to: EHTVSFQQLATWPYA*LHGKGPFLNFKMLS
Trigger: TGAAAGCATTTTGAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGACAGTATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACAAGTAAGAGTCAGCTaGGTGCAGTGGTTCACACCT +
Preference number: 2 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLQVRVS*VQWFTP
Trigger: AGGTGTGAACCACTGCACCCAGCTGACTCTTACTTG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTTACTTTTGAGCGCCTaGTCAAGGTGTCCTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLLLLSA*SRCPGF
Trigger: AAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR TCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCACAAGATGCTTAAAGTaGAAAAAGACACCCCCACCT +
Preference number: 2 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLTRCLK*KKTPPP
Trigger: AGGTGGGGGTGTCTTTTTTCACTTTAAGCATCTTGT...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAAGATTCGCTAAGGATTaGCCATTGCTGTGGTCTCCA +
Preference number: 2 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLRFAKD*PLLWSP
Trigger: TGGAGACCACAGCAATGGCCAATCCTTAGCGAATCT...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCGGTTTGAGATCTGCATaGTTTTATTCTCGGTACAAG +
Preference number: 2 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLGLRSA*FYSRYK
Trigger: CTTGTACCGAGAATAAAACCATGCAGATCTCAAACC...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCGTTTTGCCCTATGTGTaGTACTTACTACTAGCAATC +
Preference number: 2 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLVLPYV*YLLLAI
Trigger: GATTGCTAGTAGTAAGTACCACACATAGGGCAAAAC...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACTCTGGGAAGCAATGTaGAAATACCCTGTTCCTTTA +
Preference number: 2 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLLWEAM*KYPVPL
Trigger: TAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCAATGCAAGTGTAGCTTaGCATTTTAGATCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLANASVA*HFRSGK
Trigger: CTTCCCAGATCTAAAATGCCAAGCTACACTTGCATT...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR GCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAAGTATACTCTCCATCTaGTCTTCATTGATGTTACTT +
Preference number: 2 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLSILSI*SSLMLL
Trigger: AAGTAACATCAATGAAGAGCAGATGGAGAGTATACT...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 72 bp AACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTaGGAAGGCACCATCTATGAGCCAGGAAGCGGGCCC +
Preference number: 3 (lower is better)
Translates to: NPEGSLAPSTTQ*EGTIYEPGSGP
Trigger: GGGCCCGCTTCCTGGCTCATAGATGGTGCCTTCTCACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp TATGAGCCAGGAAGCGGGCCCTCACCTAACAGGATCTaGTGGGCCTTGACCCAGGACTTTCCAGCTTCTAGA +
Preference number: 3 (lower is better)
Translates to: YEPGSGPSPNRI*WALTQDFPASR
Trigger: TCTAGAAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGAGGGCCCGCTTCCTGGCTCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp GGGACTCCTGTATGCTCACTGCTGCTATTGCTACTGTaGAGTCTTCTGCCCTTTCACAGTGGACAGATCAGC +
Preference number: 3 (lower is better)
Translates to: GTPVCSLLLLLL*SLLPFHSGQIS
Trigger: GCTGATCTGTCCACTGTGAAAGGGCAGAAGACTCCACAGTAGCAATAGCAGCAGTGAGCATACAGGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 72 bp GAGGCTATGGGAAGCTGTGATTGTATCACTCCAGCCTaGGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAA +
Preference number: 3 (lower is better)
Translates to: EAMGSCDCITPA*VTEAVSECHSQ
Trigger: TTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAGGCTGGAGTGATACAATCACAGCTTCCCATAGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp AGATCACGAGGGCAGAACCCTCAAGATTGGAGTAAGTaGCCTTACAAAAGAGAACCCAGGCTGGGCACATTG +
Preference number: 3 (lower is better)
Translates to: RSRGQNPQDWSK*PYKREPRLGTL
Trigger: CAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATCTTGAGGGTTCTGCCCTCGTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp CCAACCCCCAAGGTGATATTAGCAGGTGGGGGTCTTTaGGAAGTTATTAGATCACGAGGGCAGAACCCTCAA +
Preference number: 3 (lower is better)
Translates to: PTPKVILAGGGL*EVIRSRGQNPQ
Trigger: TTGAGGGTTCTGCCCTCGTGATCTAATAACTTCCCAAAGACCCCCACCTGCTAATATCACCTTGGGGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCAGGATCTGCTGGGCCTaGACCCAGGACTTTCCAGCT +
Preference number: 3 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSRICWA*TQDFPA
Trigger: AGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCT...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp TATGCTCACTGCTGCTATTGCTACTGTGGAGTCTTCTaGCCTTTCACAGTGGACAGATCAGCAGGCGATCTA +
Preference number: 3 (lower is better)
Translates to: YAHCCYCYCGVF*PFTVDRSAGDL
Trigger: TAGATCGCCTGCTGATCTGTCCACTGTGAAAGGGCAGAAGACTCCACAGTAGCAATAGCAGCAGTGAGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCCTTGAGCCTAGGAGTTaGAGACGAGGCTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSLEPRS*RRGWAT
Trigger: TGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAAG...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTCCACCTTTACCCTACTaGATATCCAGGTCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFPPLPY*ISRSFS
Trigger: GGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTGG...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp ACTAGAAGTAAACATCTGGGACTCCTGTATGCTCACTaGTGCTATTGCTACTGTGGAGTCTTCTGCCCTTTC +
Preference number: 3 (lower is better)
Translates to: TRSKHLGLLYAH*CYCYCGVFCPF
Trigger: GAAAGGGCAGAAGACTCCACAGTAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGATGTTTACTTCTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp TCCATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTaGTCAAGGTGTCCTGGTTTTGCCCTATGTGTGGTA +
Preference number: 3 (lower is better)
Translates to: SICSSLMLLLSA*SRCPGFALCVV
Trigger: TACCACACATAGGGCAAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp CAAGAACATACTGTCAGCTTTCAACAGTTAGCAACCTaGCCTTATGCCTTGCTTCATGGGAAAGGGCCATTC +
Preference number: 3 (lower is better)
Translates to: QEHTVSFQQLAT*PYALLHGKGPF
Trigger: GAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGACAGTATGTTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCATGAAAAATTTCTGTaGTTCCTAGCAGCCCAAACA +
Preference number: 3 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFHEKFL*FLAAQT
Trigger: TGTTTGGGCTGCTAGGAACAACAGAAATTTTTCATG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp GTGGTACTTACTACTAGCAATCTCTGGGAAGCAATGTaGAAATACCCTGTTCCTTTATCAGGAGCTCCCTTG +
Preference number: 3 (lower is better)
Translates to: VVLTTSNLWEAM*KYPVPLSGAPL
Trigger: CAAGGGAGCTCCTGATAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAGATTGCTAGTAGTAAGTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp TCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTaGTCTTCATTGATGTTACTTTTGAGCGCCTGGTCA +
Preference number: 3 (lower is better)
Translates to: SCLTPFSSILSI*SSLMLLLSAWS
Trigger: TGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAAGGCAGGAGAATCACTaGAACCCAGGGGGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLRQENH*NPGGRD
Trigger: ATCTCTGCCCCCTGGGTTCAAGTGATTCTCCTGCCT...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR GCA 72 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTaGTTCCTTACCCCTTCCTTAGTACTTCGGCATATG +
Preference number: 3 (lower is better)
Translates to: IPVSYLSLLHTL*FLTPSLVLRHM
Trigger: CATATGCCGAAGTACTAAGGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTATAGACTTGGAGGTTaGAGATCTGCATGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFYRLGG*RSAWFY
Trigger: ATAAAACCATGCAGATCTCAAACCTCCAAGTCTATA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp TTTGCCCTATGTGTGGTACTTACTACTAGCAATCTCTaGGAAGCAATGTGCAAATACCCTGTTCCTTTATCA +
Preference number: 3 (lower is better)
Translates to: FALCVVLTTSNL*EAMCKYPVPLS
Trigger: TGATAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAGATTGCTAGTAGTAAGTACCACACATAGGGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CCA 72 bp TCAACAGTTAGCAACCTGGCCTTATGCCTTGCTTCATaGGAAAGGGCCATTCTTAAATTTCAAAATGCTTTC +
Preference number: 3 (lower is better)
Translates to: STVSNLALCLAS*ERAILKFQNAF
Trigger: GAAAGCATTTTGAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGTGTTTCCCCTAAATTaGTATGTTAAAATCCCAACC +
Preference number: 3 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSVFPLN*YVKIPT
Trigger: GGTTGGGATTTTAACATACAAATTTAGGGGAAACAC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTCCACCTTTACCCTACTaGATATCCAGGTCCTTTTCC +
Preference number: 3 (lower is better)
Translates to: LVLILTESGPASFFALPVPPLPY*ISRSFS
Trigger: GGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTGG...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 72 bp TTAGTCTTTAGTCATGAAATGTTCATTAAGATTCCCTaGCAGAAATCAAGTAAGAGTCAGCTGGGTGCAGTG +
Preference number: 3 (lower is better)
Translates to: LVFSHEMFIKIP*QKSSKSQLGAV
Trigger: CACTGCACCCAGCTGACTCTTACTTGATTTCTGTCAGGGAATCTTAATGAACATTTCATGACTAAAGACTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTATAGACTTGGAGGTTaGAGATCTGCATGGTTTTAT +
Preference number: 3 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLYRLGG*RSAWFY
Trigger: ATAAAACCATGCAGATCTCAAACCTCCAAGTCTATA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCCATGCCTTTATTATTTaGAGCATCTCCTTTCATGCA +
Preference number: 3 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLHAFII*SISFHA
Trigger: TGCATGAAAGGAGATGCTCAAAATAATAAAGGCATG...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR TCA 72 bp GAACTTGGTCTTTTCAATACTATAGACTTGGAGGTTTaGGATCTGCATGGTTTTATTCTCGGTACAAGAAAA +
Preference number: 3 (lower is better)
Translates to: ELGLFNTIDLEV*DLHGFILGTRK
Trigger: TTTTCTTGTACCGAGAATAAAACCATGCAGATCTCAAACCTCCAAGTCTATAGTATTGAAAAGACCAAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCGGGAGTCAGGCGAGCTaGCAGCCCCGGTGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFGSQAS*QPRWSA
Trigger: CGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCC...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGAGCTGGCAGCCCCGGTaGTCCGCGATTTGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKESWQPR*SAICSL
Trigger: CAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCT...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR TCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGGATCTGCTGGGCCTTaGCCCAGGACTTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTGSAGP*PRTFQL
Trigger: AAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGCCCAGAGGGCTCACTTaGCCCTTCCACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVPRGLT*PFHHTV
Trigger: CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGG...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGCCCAGAGGGCTCACTTaGCCCTTCCACCACACAGTG +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEPRGLT*PFHHTV
Trigger: CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGG...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGGCAGGAGAATCACTTaGACCCAGGGGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTGRRIT*TQGAEI
Trigger: AATCTCTGCCCCCTGGGTTCAAGTGATTCTCCTGCC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACGAGCCGAGATCGTGCTaGTGTACTCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHEPRSC*CTPAWA
Trigger: TGCCCAGGCTGGAGTACAGCAGCACGATCTCGGCTC...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp GGAAGCGGGCCCTCACCTAACAGGATCTGCTGGGCCTaGACCCAGGACTTTCCAGCTTCTAGAACCATGAAA +
Preference number: 4 (lower is better)
Translates to: GSGPSPNRICWA*TQDFPASRTMK
Trigger: TTTCATGGTTCTAGAAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGAGGGCCCGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACACCTCCCGCAGAGACTaGGTCATGCTGGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHTSRRD*VMLVIV
Trigger: CACGATGACCAGCATGACTCAGTCTCTGCGGGAGGT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGGGCAGGAGAATCACTTaGACCCAGGGGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEGRRIT*TQGAEI
Trigger: AATCTCTGCCCCCTGGGTTCAAGTGATTCTCCTGCC...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGCAGAGACTGAGTCATaGTGGTCATCGTGGACGGTT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTAETES*WSSWTV
Trigger: AACCGTCCACGATGACCAGCATGACTCAGTCTCTGC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGTGCTCCCCTTTCCGTaGATAGCAGAGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTVLPFP*IAEPLL
Trigger: CAACAATGGCTCTGCTATGCACGGAAAGGGGAGCAC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCACCTCCCGCAGAGACTaGGTCATGCTGGTCATCGTG +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFTSRRD*VMLVIV
Trigger: CACGATGACCAGCATGACTCAGTCTCTGCGGGAGGT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTGGGAGTCAGGCGAGCTaGCAGCCCCGGTGGTCCGCG +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVGSQAS*QPRWSA
Trigger: CGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCC...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCCAAGTAAGAGTCAGCTaGGTGCAGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTQVRVS*VQWFTP
Trigger: AGGTGTGAACCACTGCACCCAGCTGACTCTTACTTG...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTCTGCCCTTTCACAGTaGACAGATCAGCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKESALSQ*TDQQAI
Trigger: GATCGCCTGCTGATCTGTCCACTGTGAAAGGGCAGA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp GACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTaGCCCCTTCCACCACACAGTGAGAAGGCACCATCT +
Preference number: 4 (lower is better)
Translates to: DSISKTRTQRAH*PLPPHSEKAPS
Trigger: AGATGGTGCCTTCTCACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACTGTTCATATCGACACTaGCTCCGGGTGCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHCSYRH*LRVLPF
Trigger: AAAGGGGAGCACCCGGAGTCAGTGTCGATATGAACA...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCTTGAGCCTAGGAGTTTaGGACGAGGCTGGGCAACAG +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFLSLGV*DEAGQQ
Trigger: CTGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAA...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTGAGCCGAGATCGTGCTaGTGTACTCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFEPRSC*CTPAWA
Trigger: TGCCCAGGCTGGAGTACAGCAGCACGATCTCGGCTC...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGCGGTTTTCCAGCCTTTaGGCTTTGCGCAAGAACGAA +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKERFSSL*ALRKNE
Trigger: TTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCG...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTCATGCTGGTCATCGTaGACGGTTTTCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKESCWSS*TVFQPL
Trigger: CAAAGGCTGGAAAACCGTCCACGATGACCAGCATGA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGCAAGTAAGAGTCAGCTaGGTGCAGTGGTTCACACCT +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEQVRVS*VQWFTP
Trigger: AGGTGTGAACCACTGCACCCAGCTGACTCTTACTTG...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAATCACCTAACAGGATCTaGTGGGCCTTGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQSPNRI*WALTQD
Trigger: GTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGA...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCAAGGTGTCCTGGTTTTaGCCTATGTGTGGTACTTAC +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTKVSWF*PMCGTY
Trigger: GTAAGTACCACACATAGGGCAAAACCAGGACACCTT...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCCTGGCCTTATGCCTTaGTTCATGGGAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFPGLMP*FMGKGH
Trigger: ATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGAACTTCGGAAGAGCTaGAAAGTCCAGAAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTELRKS*KVQKLV
Trigger: CACTAACTTCTGGACTTTCCAGCTCTTCCGAAGTTC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCTTACTTTTGAGCGCCTaGTCAAGGTGTCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTLLLSA*SRCPGF
Trigger: AAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAA...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCCAACAGTTAGCAACCTaGCCTTATGCCTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTQQLAT*PYALLH
Trigger: ATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTG...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGCACCTTTACCCTACTTaGTATCCAGGTCCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVHLYPT*YPGPFP
Trigger: AGGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTG...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGGATCTGCTGGGCCTTaGCCCAGGACTTTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSGSAGP*PRTFQL
Trigger: AAGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAGTGCTCCCCTTTCCGTaGATAGCAGAGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQVLPFP*IAEPLL
Trigger: CAACAATGGCTCTGCTATGCACGGAAAGGGGAGCAC...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTCACCTAACAGGATCTaGTGGGCCTTGACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFSPNRI*WALTQD
Trigger: GTCCTGGGTCAAGGCCCAGCAGATCCTGTTAGGTGA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCCTCTGGGAAGCAATGTaGAAATACCCTGTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTLWEAM*KYPVPL
Trigger: TAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAG...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCTTCTTCCCCCTCTATTaGACCATTTCCTGTAACACT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTFFPLY*TISCNT
Trigger: AGTGTTACAGGAAATGGTCCAATAGAGGGGGAAGAA...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTCCCAGCCTCAAGCCCTaGAGTCAGCTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFPSLKP*SQLFLQ
Trigger: TTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGG...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTTACTTTTGAGCGCCTaGTCAAGGTGTCCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKELLLSA*SRCPGF
Trigger: AAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCGCCTGGCCAACATGGTaGACCCTGTTTCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFAWPTW*TLFLQK
Trigger: TTTTTGTAGAAACAGGGTTCACCATGTTGGCCAGGC...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACACAGTGCGTGTCAGTTaGTATTCCCAACGTATGTTC +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHTVRVS*YSQRMF
Trigger: GAACATACGTTGGGAATATCAACTGACACGCACTGT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTTGTTGCACACTTTGTaGTTCCTTACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKELLHTL*FLTPSL
Trigger: TAAGGAAGGGGTAAGGAAGCACAAAGTGTGCAACAA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAAGCAACCTGGCCTTATaGCTTGCTTCATGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQSNLAL*LASWER
Trigger: CCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCT...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAGATTGGCCATTGCTGTaGTCTCCATGTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQDWPLL*SPCVSP
Trigger: AGGGGAAACACATGGAGACCACAGCAATGGCCAATC...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCAATGCAAGTGTAGCTTaGCATTTTAGATCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTNASVA*HFRSGK
Trigger: CTTCCCAGATCTAAAATGCCAAGCTACACTTGCATT...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATTCCTCGCACCCTTGTaGCGAAGCGCGCATGCGCGC +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLFLAPL*RSAHAR
Trigger: GCGCGCATGCGCGCTTCGTCACAAGGGTGCGAGGAA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCCCAGCCTTTGGGCTTTaGGCAAGAACGAACTTCGGA +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSPAFGL*ARTNFG
Trigger: TCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGG...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGCAGAGACTGAGTCATaGTGGTCATCGTGGACGGTT +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSAETES*WSSWTV
Trigger: AACCGTCCACGATGACCAGCATGACTCAGTCTCTGC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTAACCGCCGTGGAGAGTaGCTATTGCATTGGTATGCT +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFNRRGE*LLHWYA
Trigger: AGCATACCAATGCAATAGGCACTCTCCACGGCGGTT...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGGCAAGTGTTTTTCCTTaGTTCAGAACATGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEASVFP*FRTCAV
Trigger: TACAGCACATGTTCTGAAGCAAGGAAAAACACTTGC...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTCCAGGGGGCAGAGATTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVPGGRD*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAATCTCTGCCCCCTGG...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGAGCATCTCCTTTCATaGATAAGATACTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTEHLLS*IRYCNL
Trigger: AAGGTTACAGTATCTTATGCATGAAAGGAGATGCTC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCAAGGTGTCCTGGTTTTaGCCTATGTGTGGTACTTAC +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFKVSWF*PMCGTY
Trigger: GTAAGTACCACACATAGGGCAAAACCAGGACACCTT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCCCTGGCCTTATGCCTTaGTTCATGGGAAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSPGLMP*FMGKGH
Trigger: ATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGG...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTCATGCTGGTCATCGTaGACGGTTTTCCAGCCTTTG +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFSCWSS*TVFQPL
Trigger: CAAAGGCTGGAAAACCGTCCACGATGACCAGCATGA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGGAGTGCCTATTGCATTaGTATGCTCTTCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVECLLH*YALLLL
Trigger: AAGTAGAAGAAGAGCATACCAATGCAATAGGCACTC...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCACAAGATGCTTAAAGTaGAAAAAGACACCCCCACCT +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFTRCLK*KKTPPP
Trigger: AGGTGGGGGTGTCTTTTTTCACTTTAAGCATCTTGT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGATAGACTTGGAGGTTTaGGATCTGCATGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEIDLEV*DLHGFI
Trigger: AATAAAACCATGCAGATCTCAAACCTCCAAGTCTAT...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAGTGGAGAGTGCCTATTaGATTGGTATGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQVESAY*IGMLFF
Trigger: GAAGAAGAGCATACCAATGCAATAGGCACTCTCCAC...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCAAGATTGGAGTAAGTaGCCTTACAAAAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFQDWSK*PYKREP
Trigger: GGGTTCTCTTTTGTAAGGGCACTTACTCCAATCTTG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCTCTGGGAAGCAATGTaGAAATACCCTGTTCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFLWEAM*KYPVPL
Trigger: TAAAGGAACAGGGTATTTGCACATTGCTTCCCAGAG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCAGTATACTCTCCATCTaGTCTTCATTGATGTTACTT +
Preference number: 4 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTSILSI*SSLMLL
Trigger: AAGTAACATCAATGAAGAGCAGATGGAGAGTATACT...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGATTGGCCATTGCTGTaGTCTCCATGTGTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSDWPLL*SPCVSP
Trigger: AGGGGAAACACATGGAGACCACAGCAATGGCCAATC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAACAAGATGCTTAAAGTaGAAAAAGACACCCCCACCT +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQTRCLK*KKTPPP
Trigger: AGGTGGGGGTGTCTTTTTTCACTTTAAGCATCTTGT...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACATAGACTTGGAGGTTTaGGATCTGCATGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHIDLEV*DLHGFI
Trigger: AATAAAACCATGCAGATCTCAAACCTCCAAGTCTAT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACAAAATACCTGGCAATTaGGTGTGTAACTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHKIPGN*VCNFNK
Trigger: CTTGTTGAAGTTACACACTCAATTGCCAGGTATTTT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAACAAGATTGGAGTAAGTaGCCTTACAAAAGAGAACCC +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQQDWSK*PYKREP
Trigger: GGGTTCTCTTTTGTAAGGGCACTTACTCCAATCTTG...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGAAGCTGTCTCAGAGTaGCACAGTCAACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSEAVSE*HSQLNL
Trigger: CAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCTCTGGGACTCCTGTATaGTCACTGCTGCTATTGCTA +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSSGTPV*SLLLLL
Trigger: TAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGA...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACTCTGTCTTCTTTACATaGTTTCTTTCTCTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHSVFFT*FLSLKP
Trigger: AGGCTTGAGAGAAAGAAAGCATGTAAAGAAGACAGA...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTGCGAGCCTTGGTCATaGCCTTTATCACCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLCEPWS*PLSPPA
Trigger: TGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCCTATTAATTTTCCTGTaGCCTTGTTGGTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFLLIFL*PCWSDP
Trigger: TGGATCTGACCAACAAGGCCACAGGAAAATTAATAG...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCAATGCAAGTGTAGCTTaGCATTTTAGATCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFNASVA*HFRSGK
Trigger: CTTCCCAGATCTAAAATGCCAAGCTACACTTGCATT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp ATGTGCAAATACCCTGTTCCTTTATCAGGAGCTCCCTaGGCGATTCTTTCCAGACTAAAACCCAAACCAGTC +
Preference number: 4 (lower is better)
Translates to: MCKYPVPLSGAP*AILSRLKPKPV
Trigger: GACTGGTTTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGGTATTTGCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp AGTATACTCTCCATCTGCTCTTCATTGATGTTACTTTaGAGCGCCTGGTCAAGGTGTCCTGGTTTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: SILSICSSLMLL*SAWSRCPGFAL
Trigger: TAGGGCAAAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATGGAGAGTATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAGAGACTTCTGAGAAGTaGACTTGGTCTTTTCAATAC +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQETSEK*TWSFQY
Trigger: GTATTGAAAAGACCAAGTTCACTTCTCAGAAGTCTC...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTGAACTTGGAGACTTCTaGGAAGTGAACTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFELGDF*EVNLVF
Trigger: AAAGACCAAGTTCACTTCTCAGAAGTCTCCAAGTTC...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAATGGAGGTTTGAGATCTaGATGGTTTTATTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQWRFEI*MVLFSV
Trigger: TACCGAGAATAAAACCATGCAGATCTCAAACCTCCA...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCGAGCATCTCCTTTCATaGATAAGATACTGTAACCTT +
Preference number: 4 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFEHLLS*IRYCNL
Trigger: AAGGTTACAGTATCTTATGCATGAAAGGAGATGCTC...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGGTGATATTAGCAGGTaGGGGTCTTTGGGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSGDISR*GSLGSY
Trigger: ATAACTTCCCAAAGACCCCCACCTGCTAATATCACC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTCCGCGATTTGCTCACTaGCTTTCCTCGCACCCTTGT +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVPRFAH*LSSHPC
Trigger: ACAAGGGTGCGAGGAAAGTCAGTGAGCAAATCGCGG...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACGGTGGTCCGCGATTTaGTCACTGACTTTCCTCGCA +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLRWSAI*SLTFLA
Trigger: TGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCTGCGAGCCTTGGTCATaGCCTTTATCACCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLACEPWS*PLSPPA
Trigger: TGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCA...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTCTATTAATTTTCCTGTaGCCTTGTTGGTCAGATCCA +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFLLIFL*PCWSDP
Trigger: TGGATCTGACCAACAAGGCCACAGGAAAATTAATAG...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACCCAGCCTCAAGCCCTaGAGTCAGCTGTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLPSLKP*SQLFLQ
Trigger: TTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTACTACTAGCAATCTCTaGGAAGCAATGTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFTTSNL*EAMCKY
Trigger: GTATTTGCACATTGCTTCCCAGAGATTGCTAGTAGT...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp CTTATACCTGTGAGCTATTTGAGTTTGTTGCACACTTaGTGCTTCCTTACCCCTTCCTTAGTACTTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LIPVSYLSLLHT*CFLTPSLVLRH
Trigger: ATGCCGAAGTACTAAGGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp GTCAGCTTTCAACAGTTAGCAACCTGGCCTTATGCCTaGCTTCATGGGAAAGGGCCATTCTTAAATTTCAAA +
Preference number: 4 (lower is better)
Translates to: VSFQQLATWPYA*LHGKGPFLNFK
Trigger: TTTGAAATTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTGAAAGCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCTGTTCATATCGACACTaGCTCCGGGTGCTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLACSYRH*LRVLPF
Trigger: AAAGGGGAGCACCCGGAGTCAGTGTCGATATGAACA...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTCCTTCCACCACACAGTaGGAAGGCACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVPSTTQ*EGTIYE
Trigger: CTCATAGATGGTGCCTTCTCACTGTGTGGTGGAAGG...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACCAGCCTTTGGGCTTTaGGCAAGAACGAACTTCGGA +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLPAFGL*ARTNFG
Trigger: TCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAATTGCTTCAGAACATGTaGTGTAATCACTATATCTTC +
Preference number: 4 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQLLQNM*CNHYIF
Trigger: GAAGATATAGTGATTACAGCACATGTTCTGAAGCAA...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCGGTTTGAGATCTGCATaGTTTTATTCTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSGLRSA*FYSRYK
Trigger: CTTGTACCGAGAATAAAACCATGCAGATCTCAAACC...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATCTGCCCTTTCACAGTaGACAGATCAGCAGGCGATC +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLSALSQ*TDQQAI
Trigger: GATCGCCTGCTGATCTGTCCACTGTGAAAGGGCAGA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTAAACTCTCTCAAAATTaGGAGCCTTGGTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVKLSQN*EPWSWP
Trigger: AGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTT...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCGAGACTGAGTCATGCTaGTCATCGTGGACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAETESC*SSWTVF
Trigger: GAAAACCGTCCACGATGACCAGCATGACTCAGTCTC...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTGAGACTGAGTCATGCTaGTCATCGTGGACGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVETESC*SSWTVF
Trigger: GAAAACCGTCCACGATGACCAGCATGACTCAGTCTC...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCGGTGATATTAGCAGGTaGGGGTCTTTGGGAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLGDISR*GSLGSY
Trigger: ATAACTTCCCAAAGACCCCCACCTGCTAATATCACC...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTACTGGTCAAGGTGTCCTaGTTTTGCCCTATGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLLVKVS*FCPMCG
Trigger: ACCACACATAGGGCAAAACCAGGACACCTTGACCAG...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCCAACAGTTAGCAACCTaGCCTTATGCCTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLQQLAT*PYALLH
Trigger: ATGAAGCAAGGCATAAGGCCAGGTTGCTAACTGTTG...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTATTTCTATGTGTGTTaGAGTCCACATGGTATTTCT +
Preference number: 4 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFYFYVC*SPHGIS
Trigger: AGAAATACCATGTGGACTCCAACACACATAGAAATA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR TCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAGCCTGGCCAACATGGTaGACCCTGTTTCTACAAAAA +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLAWPTW*TLFLQK
Trigger: TTTTTGTAGAAACAGGGTTCACCATGTTGGCCAGGC...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAGAAGCTGTCTCAGAGTaGCACAGTCAACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLEAVSE*HSQLNL
Trigger: CAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTC...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTTCTGGGACTCCTGTATaGTCACTGCTGCTATTGCTA +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVSGTPV*SLLLLL
Trigger: TAGCAATAGCAGCAGTGAGCATACAGGAGTCCCAGA...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTTGTTGCACACTTTGTaGTTCCTTACCCCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLLLHTL*FLTPSL
Trigger: TAAGGAAGGGGTAAGGAAGCACAAAGTGTGCAACAA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTGTCCTAAATCTTTACTaGTTCTCTCCAGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVVLNLY*FSPVCS
Trigger: GGAACACACTGGAGAGAAGCAGTAAAGATTTAGGAC...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR GCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTGTGGAGAGTGCCTATTaGATTGGTATGCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVVESAY*IGMLFF
Trigger: GAAGAAGAGCATACCAATGCAATAGGCACTCTCCAC...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCGCAAGTGTTTTTCCTTaGTTCAGAACATGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLASVFP*FRTCAV
Trigger: TACAGCACATGTTCTGAAGCAAGGAAAAACACTTGC...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTGAACTTCGGAAGAGCTaGAAAGTCCAGAAGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVELRKS*KVQKLV
Trigger: CACTAACTTCTGGACTTTCCAGCTCTTCCGAAGTTC...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTCAAAATTGCGAGCCTTaGTCATGGCCTTTATCACCT +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVQNCEP*SWPLSP
Trigger: AGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTG...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCCAAAATTGCGAGCCTTaGTCATGGCCTTTATCACCT +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAQNCEP*SWPLSP
Trigger: AGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTG...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTGTTTTGCCCTATGTGTaGTACTTACTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVVLPYV*YLLLAI
Trigger: GATTGCTAGTAGTAAGTACCACACATAGGGCAAAAC...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATTCTTCCCCCTCTATTaGACCATTTCCTGTAACACT +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLFFPLY*TISCNT
Trigger: AGTGTTACAGGAAATGGTCCAATAGAGGGGGAAGAA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTTTGCTTCAGAACATGTaGTGTAATCACTATATCTTC +
Preference number: 4 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVLLQNM*CNHYIF
Trigger: GAAGATATAGTGATTACAGCACATGTTCTGAAGCAA...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTTGGAGGTTTGAGATCTaGATGGTTTTATTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVWRFEI*MVLFSV
Trigger: TACCGAGAATAAAACCATGCAGATCTCAAACCTCCA...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCGATGACTTTACACTTTaGCTTCCTTTGGAATTCCAC +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLADDFTL*LPLEFH
Trigger: GTGGAATTCCAAAGGAAGGCAAAGTGTAAAGTCATC...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAGAGTGCCTATTGCATTaGTATGCTCTTCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLECLLH*YALLLL
Trigger: AAGTAGAAGAAGAGCATACCAATGCAATAGGCACTC...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTGGTTTGAGATCTGCATaGTTTTATTCTCGGTACAAG +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVGLRSA*FYSRYK
Trigger: CTTGTACCGAGAATAAAACCATGCAGATCTCAAACC...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTACTACTAGCAATCTCTaGGAAGCAATGTGCAAATAC +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVTTSNL*EAMCKY
Trigger: GTATTTGCACATTGCTTCCCAGAGATTGCTAGTAGT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTAGTTTTGCCCTATGTGTaGTACTTACTACTAGCAATC +
Preference number: 4 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLVLPYV*YLLLAI
Trigger: GATTGCTAGTAGTAAGTACCACACATAGGGCAAAAC...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTTTATGCCTTGCTTCATaGGAAAGGGCCATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: LVLILTESGPASFFALPVLCLAS*ERAILK
Trigger: TTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAA...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCTTATGCCTTGCTTCATaGGAAAGGGCCATTCTTAAA +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLALCLAS*ERAILK
Trigger: TTTAAGAATGGCCCTTTCCCATGAAGCAAGGCATAA...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR TCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCAAAATACCTGGCAATTaGGTGTGTAACTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAKIPGN*VCNFNK
Trigger: CTTGTTGAAGTTACACACTCAATTGCCAGGTATTTT...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
3UTR CAA 72 bp CTAGAGTACAGGATCATTGAATTTAGTTGTTCTCAGTaGTCTTTAATGTGGAACAGTTCCTTAGCCTTTATG +
Preference number: 4 (lower is better)
Translates to: LEYRIIEFSCSQ*SLMWNSSLAFM
Trigger: CATAAAGGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGATCCTGTACTCTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR GCA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCAGTATACTCTCCATCTaGTCTTCATTGATGTTACTT +
Preference number: 4 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLASILSI*SSLMLL
Trigger: AAGTAACATCAATGAAGAGCAGATGGAGAGTATACT...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp CCTTCTCCGCCCCTAGGAGCGCAAGAGGCCGGGAGTCAGGCGAGCTaGCAGCCCCGGTGGTCCGCGATTTGCTCACTGACTTTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PSPPLGAQEAGSQAS*QPRWSAICSLTFLA
Trigger: TGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCCGGCCTCTTGCGCTCCTAGGGGCGGAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS GCA 90 bp GAGCCTTGGTCATGGCCTTTATCACCTCCCGCAGAGACTGAGTCATaGTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTTGCGCAA +
Preference number: 5 (lower is better)
Translates to: EPWSWPLSPPAETES*WSSWTVFQPLGFAQ
Trigger: TTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp TGGCCTTTATCACCTCCCGCAGAGACTGAGTCATGCTGGTCATCGTaGACGGTTTTCCAGCCTTTGGGCTTTGCGCAAGAACGAACTTCG +
Preference number: 5 (lower is better)
Translates to: WPLSPPAETESCWSS*TVFQPLGFAQERTS
Trigger: CGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp CCTTGGTCATGGCCTTTATCACCTCCCGCAGAGACTGAGTCATGCTaGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTTGCGCAAGAA +
Preference number: 5 (lower is better)
Translates to: PWSWPLSPPAETESC*SSWTVFQPLGFAQE
Trigger: TTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCACCCAGAGGGCTCACTaGCCCCTTCCACCACACAGT +
Preference number: 5 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFTQRAH*PLPPHS
Trigger: ACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGACCTGGCCTTATGCCTaGCTTCATGGGAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVTWPYA*LHGKGP
Trigger: TGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGT...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS TCA 90 bp AAATTGCGAGCCTTGGTCATGGCCTTTATCACCTCCCGCAGAGACTaGGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTT +
Preference number: 5 (lower is better)
Translates to: KLRALVMAFITSRRD*VMLVIVDGFPAFGL
Trigger: AAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp CAGAGACTGAGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTTaGGCTTTGCGCAAGAACGAACTTCGGAAGAGCTGGAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QRLSHAGHRGRFSSL*ALRKNELRKSWKVQ
Trigger: CTGGACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCTTTCCTGTGGCCTTGTaGGTCAGATCCACAGAGGTA +
Preference number: 5 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTFPVAL*VRSTEV
Trigger: TACCTCTGTGGATCTGACCAACAAGGCCACAGGAAA...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCTCCAGCCTTTGGGCTTaGCGCAAGAACGAACTTCGG +
Preference number: 5 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFSSLWA*RKNELR
Trigger: CCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGA...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp CCTCCACGTGTTACTTTCCCAAAACTCTCTCAAAATTGCGAGCCTTaGTCATGGCCTTTATCACCTCCCGCAGAGACTGAGTCATGCTGG +
Preference number: 5 (lower is better)
Translates to: PPRVTFPKLSQNCEP*SWPLSPPAETESCW
Trigger: CCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAACACGTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTCAAAATTGCGAGCCTaGGTCATGGCCTTTATCACC +
Preference number: 5 (lower is better)
Translates to: CNLSVPASSPGVSCFSKESKLRA*VMAFIT
Trigger: GGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGCCACCTTTACCCTACTaGATATCCAGGTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEPPLPY*ISRSFS
Trigger: GGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTGG...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGCCACCTTTACCCTACTaGATATCCAGGTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVPPLPY*ISRSFS
Trigger: GGAAAAGGACCTGGATATCAAGTAGGGTAAAGGTGG...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGTTATCAGGAGCTCCCTaGGCGATTCTTTCCAGACTA +
Preference number: 5 (lower is better)
Translates to: CNLSVPASSPGVSCFSKELSGAP*AILSRL
Trigger: TAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAA...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 90 bp CGTGTTACTTTCCCAAAACTCTCTCAAAATTGCGAGCCTTGGTCATaGCCTTTATCACCTCCCGCAGAGACTGAGTCATGCTGGTCATCG +
Preference number: 5 (lower is better)
Translates to: RVTFPKLSQNCEPWS*PLSPPAETESCWSS
Trigger: CGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTAGGCAGGAGAATCACTaGAACCCAGGGGGCAGAGAT +
Preference number: 5 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFRQENH*NPGGRD
Trigger: ATCTCTGCCCCCTGGGTTCAAGTGATTCTCCTGCCT...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACCAAGGTGTCCTGGTTTaGCCCTATGTGTGGTACTTA +
Preference number: 5 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHQGVLV*PYVWYL
Trigger: TAAGTACCACACATAGGGCAAAACCAGGACACCTTG...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS GCA 90 bp ACGTATGTTCCTCCACGTGTTACTTTCCCAAAACTCTCTCAAAATTaGGAGCCTTGGTCATGGCCTTTATCACCTCCCGCAGAGACTGAG +
Preference number: 5 (lower is better)
Translates to: TYVPPRVTFPKLSQN*EPWSWPLSPPAETE
Trigger: CTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAACACGTGGAGGAACATACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CCA 90 bp TTTTCCAGCCTTTGGGCTTTGCGCAAGAACGAACTTCGGAAGAGCTaGAAAGTCCAGAAGTTAGTGAAAGAAGGAGGACACAAAGGGCGA +
Preference number: 5 (lower is better)
Translates to: FSSLWALRKNELRKS*KVQKLVKEGGHKGR
Trigger: TCGCCCTTTGTGTCCTCCTTCTTTCACTAACTTCTGGACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGTGCAAGTGTTTTTCCTaGCTTCAGAACATGTGCTGT +
Preference number: 5 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVCKCFS*LQNMCC
Trigger: ACAGCACATGTTCTGAAGCAAGGAAAAACACTTGCA...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAATTTCCTGTGGCCTTGTaGGTCAGATCCACAGAGGTA +
Preference number: 5 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQFPVAL*VRSTEV
Trigger: TACCTCTGTGGATCTGACCAACAAGGCCACAGGAAA...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGTCATCCATATTCGTTTaGTTGTCCCAGTATCCTTGG +
Preference number: 5 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVSSIFV*LSQYPW
Trigger: CCAAGGATACTGGGACAACAAAACGAATATGGATGA...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACCTTTCTGTCCCAGCCTCAAGCCCTGGAGTCAGCTGTTTCTCCAAGGAGGTGAGCTATTTGAGTTaGTTGCACACTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: CNLSVPASSPGVSCFSKEVSYLS*LHTLCF
Trigger: GAAGCACAAAGTGTGCAACAAACTCAAATAGCTCAC...CTCCTTGGAGAAACAGCTGACTCCAGGGCTTGAGGCTGGGACAGAAAGGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCACCTGGCCTTATGCCTaGCTTCATGGGAAAGGGCCA +
Preference number: 5 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSTWPYA*LHGKGP
Trigger: TGGCCCTTTCCCATGAAGCAAGGCATAAGGCCAGGT...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCACACAGTGCATGAAAAATTTCTGTaGTTCCTAGCAGCCCAAACA +
Preference number: 5 (lower is better)
Translates to: PFQKREPRGLTCPFHHTVHEKFL*FLAAQT
Trigger: TGTTTGGGCTGCTAGGAACAACAGAAATTTTTCATG...CACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCGTGTTTCCCCTAAATTaGTATGTTAAAATCCCAACC +
Preference number: 5 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTVFPLN*YVKIPT
Trigger: GGTTGGGATTTTAACATACAAATTTAGGGGAAACAC...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GCGAGACTCCATTTCAAAAACGAGAACCCAGAGGGCTCACTTGCCCCTTCCACCCATGCCTTTATTATTTaGAGCATCTCCTTTCATGCA +
Preference number: 5 (lower is better)
Translates to: ARLHFKNENPEGSLAPSTHAFII*SISFHA
Trigger: TGCATGAAAGGAGATGCTCAAAATAATAAAGGCATG...GGTGGAAGGGGCAAGTGAGCCCTCTGGGTTCTCGTTTTTGAAATGGAGTCTCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACACCAAGTTAGGCATTTaGGCAGCCATTGTTTACGTT +
Preference number: 5 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHTKLGI*AAIVYV
Trigger: AACGTAAACAATGGCTGCCAAAATGCCTAACTTGGT...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTAGGATCTGCTGGGCCTaGACCCAGGACTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVRICWA*TQDFPA
Trigger: AGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCT...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTTATCAGGAGCTCCCTaGGCGATTCTTTCCAGACTA +
Preference number: 5 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFLSGAP*AILSRL
Trigger: TAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCTCATCCATATTCGTTTaGTTGTCCCAGTATCCTTGG +
Preference number: 5 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFSSIFV*LSQYPW
Trigger: CCAAGGATACTGGGACAACAAAACGAATATGGATGA...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTTCCAGCCTTTGGGCTTaGCGCAAGAACGAACTTCGG +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVSSLWA*RKNELR
Trigger: CCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGA...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAAAGAGTGCCTATTGCATaGGTATGCTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQRVPIA*VCSSST
Trigger: AGTAGAAGAAGAGCATACCAATGCAATAGGCACTCT...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GATTGGAGTAAGTGCCCTTACAAAAGAGAACCCAGGCTGGGCACATTGGCTCACTGCATAGCAGAGCCATaGTTGATATGTTATCTACTA +
Preference number: 5 (lower is better)
Translates to: DWSKCPYKREPRLGTLAHCIAEP*LICYLL
Trigger: TAGTAGATAACATATCAACAATGGCTCTGCTATGCA...GTGAGCCAATGTGCCCAGCCTGGGTTCTCTTTTGTAAGGGCACTTACTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCAATTTTCCTGTGGCCTaGTTGGTCAGATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSNFPVA*LVRSTE
Trigger: CTCTGTGGATCTGACCAACAAGGCCACAGGAAAATT...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTACCCAGAGGGCTCACTaGCCCCTTCCACCACACAGT +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVTQRAH*PLPPHS
Trigger: ACTGTGTGGTGGAAGGGGCAAGTGAGCCCTCTGGGT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTCTTGAGCCTAGGAGTTaGAGACGAGGCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVLEPRS*RRGWAT
Trigger: TGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAAG...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTTCATTGATGTTACTTTaGAGCGCCTGGTCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFSLMLL*SAWSRC
Trigger: ACACCTTGACCAGGCGCTCAAAAGTAACATCAATGA...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCCCGGTGGTCCGCGATTaGCTCACTGACTTTCCTCGC +
Preference number: 5 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAPVVRD*LTDFPR
Trigger: GCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGG...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CAA 90 bp CTGAGTGACAGAAGCTGTCTCAGAGTGCCACAGTCAACTGAACTTGGAGACTTCATAGCAGAGCCATTGTaGATATGTTATCTACTAACG +
Preference number: 5 (lower is better)
Translates to: LSDRSCLRVPQSTELGDFIAEPL*ICYLLT
Trigger: CGTTAGTAGATAACATATCAACAATGGCTCTGCTAT...GAAGTCTCCAAGTTCAGTTGACTGTGGCACTCTGAGACAGCTTCTGTCACTCAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTAGGATCTGCTGGGCCTaGACCCAGGACTTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVRICWA*TQDFPA
Trigger: AGCTGGAAAGTCCTGGGTCAAGGCCCAGCAGATCCT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CCCTGTTCCTTTATCAGGAGCTCCCTTGGCGATTCTTTCCAGACTAAAACCCAATATAGACTTGGAGGTTaGAGATCTGCATGGTTTTAT +
Preference number: 5 (lower is better)
Translates to: PCSFIRSSLGDSFQTKTQYRLGG*RSAWFY
Trigger: ATAAAACCATGCAGATCTCAAACCTCCAAGTCTATA...TTGGGTTTTAGTCTGGAAAGAATCGCCAAGGGAGCTCCTGATAAAGGAACAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCCTTGAGCCTAGGAGTTaGAGACGAGGCTGGGCAACA +
Preference number: 5 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLALEPRS*RRGWAT
Trigger: TGTTGCCCAGCCTCGTCTCAAACTCCTAGGCTCAAG...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCACCAAGTTAGGCATTTaGGCAGCCATTGTTTACGTT +
Preference number: 5 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSTKLGI*AAIVYV
Trigger: AACGTAAACAATGGCTGCCAAAATGCCTAACTTGGT...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTTCAAAATTGCGAGCCTaGGTCATGGCCTTTATCACC +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVSKLRA*VMAFIT
Trigger: GGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGA...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTAAAACTCTCTCAAAATaGCGAGCCTTGGTCATGGCC +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVKTLSK*RALVMA
Trigger: GGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTT...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCCGTGGAGAGTGCCTATaGCATTGGTATGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLRGECL*HWYALL
Trigger: AAGAAGAGCATACCAATGCAATAGGCACTCTCCACG...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTCGTGGAGAGTGCCTATaGCATTGGTATGCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVRGECL*HWYALL
Trigger: AAGAAGAGCATACCAATGCAATAGGCACTCTCCACG...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCAATTTTCCTGTGGCCTaGTTGGTCAGATCCACAGAG +
Preference number: 5 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLNFPVA*LVRSTE
Trigger: CTCTGTGGATCTGACCAACAAGGCCACAGGAAAATT...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp CATCTGCTCTTCATTGATGTTACTTTTGAGCGCCTGGTCAAGGTGTCCTGGTTTGTGTTTCCCCTAAATTaGTATGTTAAAATCCCAACC +
Preference number: 5 (lower is better)
Translates to: HLLFIDVTFERLVKVSWFVFPLN*YVKIPT
Trigger: GGTTGGGATTTTAACATACAAATTTAGGGGAAACAC...AAACCAGGACACCTTGACCAGGCGCTCAAAAGTAACATCAATGAAGAGCAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATACCTGTGAGCTATTTGAGTTTGTTGCACACTTTGTGCTTCCTTACCCCTTCCTGCATAGCAGAGCCATaGTTGATATGTTATCTACTA +
Preference number: 5 (lower is better)
Translates to: IPVSYLSLLHTLCFLTPSCIAEP*LICYLL
Trigger: TAGTAGATAACATATCAACAATGGCTCTGCTATGCA...GGAAGGGGTAAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCCACAGTGCGTGTCAGTaGATATTCCCAACGTATGTT +
Preference number: 5 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLHSACQ*IFPTYV
Trigger: AACATACGTTGGGAATATCAACTGACACGCACTGTG...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CAA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCCAAGGTGTCCTGGTTTaGCCCTATGTGTGGTACTTA +
Preference number: 5 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAQGVLV*PYVWYL
Trigger: TAAGTACCACACATAGGGCAAAACCAGGACACCTTG...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTCATGAAAAATTTCTGTaGTTCCTAGCAGCCCAAACA +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVHEKFL*FLAAQT
Trigger: TGTTTGGGCTGCTAGGAACAACAGAAATTTTTCATG...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATCATTGATGTTACTTTaGAGCGCCTGGTCAAGGTGT +
Preference number: 5 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLSLMLL*SAWSRC
Trigger: ACACCTTGACCAGGCGCTCAAAAGTAACATCAATGA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp GTCTTTAATGTGGAACAGTTCCTTAGCCTTTATGTGTTCCATGACCTCTATGTTATACCTGTGAGCTATTaGAGTTTGTTGCACACTTTG +
Preference number: 5 (lower is better)
Translates to: VFNVEQFLSLYVFHDLYVIPVSY*SLLHTL
Trigger: CAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT...AACATAGAGGTCATGGAACACATAAAGGCTAAGGAACTGTTCCACATTAAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCACACTTTGCCTTCCTTaGGAATTCCACTTCCTTATT +
Preference number: 5 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLTLCLP*EFHFLI
Trigger: AATAAGGAAGTGGAATTCCAAAGGAAGGCAAAGTGT...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTAGAGTGCCTATTGCATaGGTATGCTCTTCTTCTACT +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVRVPIA*VCSSST
Trigger: AGTAGAAGAAGAGCATACCAATGCAATAGGCACTCT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTGAATTGTTTATTCATGCTTAACGCCCTTCTCAAGTATACTCTCCATCTGCTCTATCTTCTCCTAATTTaGCAGGTGACATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: LNCLFMLNALLKYTLHLLYLLLI*QVTCTL
Trigger: TAACGTACATGTCACCTGCAAAATTAGGAGAAGATA...GAGCAGATGGAGAGTATACTTGAGAAGGGCGTTAAGCATGAATAAACAATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATGCAAGTGTTTTTCCTaGCTTCAGAACATGTGCTGT +
Preference number: 5 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLCKCFS*LQNMCC
Trigger: ACAGCACATGTTCTGAAGCAAGGAAAAACACTTGCA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTGTGAGCTATTTGAGTTaGTTGCACACTTTGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVVSYLS*LHTLCF
Trigger: GAAGCACAAAGTGTGCAACAAACTCAAATAGCTCAC...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTAGTGTGTTCCTCCTCTaGACATCTCATTCAGGTATT +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVSVFLL*TSHSGI
Trigger: AATACCTGAATGAGATGTCAAGAGGAGGAACACACT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS GCA 90 bp GTATTCACCTTCATCACTCATTTCCATAAAGATGACTTTACACTTTaGCTTCCTTTGGAATTCCACTTCCTTATTTCTATGTGTGTTGGA +
Preference number: 5 (lower is better)
Translates to: VFTFITHFHKDDFTL*LPLEFHFLISMCVG
Trigger: TCCAACACACATAGAAATAAGGAAGTGGAATTCCAAAGGAAGGCAAAGTGTAAAGTCATCTTTATGGAAATGAGTGATGAAGGTGAATAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476436.1
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTAGCTATTTGAGTTTGTaGCACACTTTGTGCTTCCTT +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVSYLSL*HTLCFL
Trigger: AAGGAAGCACAAAGTGTGCAACAAACTCAAATAGCT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTATACCTGTGAGCTATTaGAGTTTGTTGCACACTTTG +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVIPVSY*SLLHTL
Trigger: CAAAGTGTGCAACAAACTCAAATAGCTCACAGGTAT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TTAGTTTTAATCTTAACTGAGAGTGGTCCTGCTAGTTTCTTTGCTTTACCTGTTATAGCAGAGCCATTGTaGATATGTTATCTACTAACG +
Preference number: 5 (lower is better)
Translates to: LVLILTESGPASFFALPVIAEPL*ICYLLT
Trigger: CGTTAGTAGATAACATATCAACAATGGCTCTGCTAT...AACAGGTAAAGCAAAGAAACTAGCAGGACCACTCTCAGTTAAGATTAAAACTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp ATCATTGAATTTAGTTGTTCTCAGTTGTCTTTAATGTGGAACAGTTCCTTAGCCTATCTTCTCCTAATTTaGCAGGTGACATGTACGTTA +
Preference number: 5 (lower is better)
Translates to: IIEFSCSQLSLMWNSSLAYLLLI*QVTCTL
Trigger: TAACGTACATGTCACCTGCAAAATTAGGAGAAGATA...GGCTAAGGAACTGTTCCACATTAAAGACAACTGAGAACAACTAAATTCAATGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS-3UTR CAA 90 bp TGTAACTTCAACAAGAACAGGAATCAAGAACATACTGTCAGCTTTCAACAGTTATTATTTCTATGTGTGTaGGAGTCCACATGGTATTTC +
Preference number: 5 (lower is better)
Translates to: CNFNKNRNQEHTVSFQQLLFLCV*ESTWYF
Trigger: GAAATACCATGTGGACTCCAACACACATAGAAATAA...TAACTGTTGAAAGCTGACAGTATGTTCTTGATTCCTGTTCTTGTTGAAGTTACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CCA 72 bp CCCCTAGGAGCGCAAGAGGCCGGGAGTCAGGCGAGCTaGCAGCCCCGGTGGTCCGCGATTTGCTCACTGACT +
Preference number: 6 (lower is better)
Translates to: PLGAQEAGSQAS*QPRWSAICSLT
Trigger: AGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCCGGCCTCTTGCGCTCCTAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CCA 72 bp CAAGAGGCCGGGAGTCAGGCGAGCTGGCAGCCCCGGTaGTCCGCGATTTGCTCACTGACTTTCCTCGCACCC +
Preference number: 6 (lower is better)
Translates to: QEAGSQASWQPR*SAICSLTFLAP
Trigger: GGGTGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCCGGCCTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CAA 90 bp AGAGGCCGGGAGTCAGGCGAGCTGGCAGCCCCGGTGGTCCGCGATTaGCTCACTGACTTTCCTCGCACCCTTGTGACGAAGCGCGCATGC +
Preference number: 6 (lower is better)
Translates to: RGRESGELAAPVVRD*LTDFPRTLVTKRAC
Trigger: GCATGCGCGCTTCGTCACAAGGGTGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCGCCTGACTCCCGGCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS TCA 72 bp CGAGCTGGCAGCCCCGGTGGTCCGCGATTTGCTCACTaGCTTTCCTCGCACCCTTGTGACGAAGCGCGCATG +
Preference number: 6 (lower is better)
Translates to: RAGSPGGPRFAH*LSSHPCDEARM
Trigger: CATGCGCGCTTCGTCACAAGGGTGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CAA 72 bp GAGTCAGGCGAGCTGGCAGCCCCGGTGGTCCGCGATTaGCTCACTGACTTTCCTCGCACCCTTGTGACGAAG +
Preference number: 6 (lower is better)
Translates to: ESGELAAPVVRD*LTDFPRTLVTK
Trigger: CTTCGTCACAAGGGTGCGAGGAAAGTCAGTGAGCAAATCGCGGACCACCGGGGCTGCCAGCTCGCCTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS TCA 72 bp GCCTTGGTCATGGCCTTTATCACCTCCCGCAGAGACTaGGTCATGCTGGTCATCGTGGACGGTTTTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ALVMAFITSRRD*VMLVIVDGFPA
Trigger: GGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS GCA 72 bp TCATGGCCTTTATCACCTCCCGCAGAGACTGAGTCATaGTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGC +
Preference number: 6 (lower is better)
Translates to: SWPLSPPAETES*WSSWTVFQPLG
Trigger: GCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 72 bp TCACCTCCCGCAGAGACTGAGTCATGCTGGTCATCGTaGACGGTTTTCCAGCCTTTGGGCTTTGCGCAAGAA +
Preference number: 6 (lower is better)
Translates to: SPPAETESCWSS*TVFQPLGFAQE
Trigger: TTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS GCA 72 bp CTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTTaGGCAAGAACGAACTTCGGAAGAGCTGGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: LVIVDGFPAFGL*ARTNFGRAGKS
Trigger: GGACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 72 bp AGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTTaGGCTTTGCGCAAGAACGAACTTCGGAAGAGCTGG +
Preference number: 6 (lower is better)
Translates to: SHAGHRGRFSSL*ALRKNELRKSW
Trigger: CCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CCA 72 bp TGGCCTTTATCACCTCCCGCAGAGACTGAGTCATGCTaGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: WPLSPPAETESC*SSWTVFQPLGF
Trigger: AAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CAA 72 bp GCTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTaGCGCAAGAACGAACTTCGGAAGAGCTGGAAAGTC +
Preference number: 6 (lower is better)
Translates to: AGHRGRFSSLWA*RKNELRKSWKV
Trigger: GACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CAA 72 bp GAGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTaGGGCTTTGCGCAAGAACGAACTTCGGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: ESCWSSWTVFQP*GFAQERTSEEL
Trigger: CAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CAA 90 bp GCAGAGACTGAGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTaGGGCTTTGCGCAAGAACGAACTTCGGAAGAGCTGGAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: AETESCWSSWTVFQP*GFAQERTSEELESP
Trigger: TGGACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CAA 90 bp CTGAGTCATGCTGGTCATCGTGGACGGTTTTCCAGCCTTTGGGCTTaGCGCAAGAACGAACTTCGGAAGAGCTGGAAAGTCCAGAAGTTA +
Preference number: 6 (lower is better)
Translates to: LSHAGHRGRFSSLWA*RKNELRKSWKVQKL
Trigger: TAACTTCTGGACTTTCCAGCTCTTCCGAAGTTCGTTCTTGCGCAAAGCCCAAAGGCTGGAAAACCGTCCACGATGACCAGCATGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS TCA 72 bp TTGCAGGTGACATGTACGTTATGTTCATATCGACACTaGCTCCGGGTGCTCCCCTTTCCGTGCATAGCAGAG +
Preference number: 6 (lower is better)
Translates to: LQVTCTLCSYRH*LRVLPFPCIAE
Trigger: CTCTGCTATGCACGGAAAGGGGAGCACCCGGAGTCAGTGTCGATATGAACATAACGTACATGTCACCTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000230048.5
ENST00000476436.1
ENST00000537591.5
CDS GCA 72 bp CCTCCACGTGTTACTTTCCCAAAACTCTCTCAAAATTaGGAGCCTTGGTCATGGCCTTTATCACCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: PPRVTFPKLSQN*EPWSWPLSPPA
Trigger: TGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAACACGTGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CCA 72 bp TTCCCAAAACTCTCTCAAAATTGCGAGCCTTGGTCATaGCCTTTATCACCTCCCGCAGAGACTGAGTCATGC +
Preference number: 6 (lower is better)
Translates to: FPKLSQNCEPWS*PLSPPAETESC
Trigger: GCATGACTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000230048.5
ENST00000537591.5
CDS CAA 72 bp TCCTCCACGTGTTACTTTCCCAAAACTCTCTCAAAATaGCGAGCCTTGGTCATGGCCTTTATCACCTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSTCYFPKTLSK*RALVMAFITSR
Trigger: GCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAACACGTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CCA 72 bp GTTACTTTCCCAAAACTCTCTCAAAATTGCGAGCCTTaGTCATGGCCTTTATCACCTCCCGCAGAGACTGAG +
Preference number: 6 (lower is better)
Translates to: VTFPKLSQNCEP*SWPLSPPAETE
Trigger: CTCAGTCTCTGCGGGAGGTGATAAAGGCCATGACCAAGGCTCGCAATTTTGAGAGAGTTTTGGGAAAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS GCA 72 bp TATCTACTAACGTGGCTGTCAAACCGCCGTGGAGAGTaGCTATTGCATTGGTATGCTCTTCTTCTACTTTCA +
Preference number: 6 (lower is better)
Translates to: YLLTWLSNRRGE*LLHWYALLLLS
Trigger: TGAAAGTAGAAGAAGAGCATACCAATGCAATAGGCACTCTCCACGGCGGTTTGACAGCCACGTTAGTAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230048.5
ENST00000476436.1
ENST00000537591.5
CDS TCA 72 bp ATGGTATTTCTAGATCCTAGCACAGTGCGTGTCAGTTaGTATTCCCAACGTATGTTCCTCCACGTGTTACTG +
Preference number: 6 (lower is better)
Translates to: MVFLDPSTVRVS*YSQRMFLHVLL
Trigger: CAGTAACACGTGGAGGAACATACGTTGGGAATATCAACTGACACGCACTGTGCTAGGATCTAGAAATACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476436.1
CDS TCA 72 bp ATGGTATTTCTAGATCCTAGCACAGTGCGTGTCAGTTaGTATTCCCAACGTATGTTCCTCCACGTGTTACTT +
Preference number: 6 (lower is better)
Translates to: MVFLDPSTVRVS*YSQRMFLHVLL
Trigger: AAGTAACACGTGGAGGAACATACGTTGGGAATATCAACTGACACGCACTGTGCTAGGATCTAGAAATACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537591.5
CDS CAA 72 bp CATTTCCATAAAGATGACTTTACACTTTGCCTTCCTTaGGAATTCCACTTCCTTATTTCTATGTGTGTTGGA +
Preference number: 6 (lower is better)
Translates to: HFHKDDFTLCLP*EFHFLISMCVG
Trigger: TCCAACACACATAGAAATAAGGAAGTGGAATTCCAAAGGAAGGCAAAGTGTAAAGTCATCTTTATGGAAATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476436.1
ENST00000537591.5
CDS GCA 72 bp TTCATCACTCATTTCCATAAAGATGACTTTACACTTTaGCTTCCTTTGGAATTCCACTTCCTTATTTCTATG +
Preference number: 6 (lower is better)
Translates to: FITHFHKDDFTL*LPLEFHFLISM
Trigger: CATAGAAATAAGGAAGTGGAATTCCAAAGGAAGGCAAAGTGTAAAGTCATCTTTATGGAAATGAGTGATGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476436.1
ENST00000537591.5