RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACOD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000102794

Ensembl transcript IDs: ENST00000377462.6, ENST00000449753.2

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATaGACCAGAGCCCTCTCCACTGTCAGAAAATATACATGCAGGTTC +
Preference number: 1 (lower is better)
Translates to: GLVISHGLGDLLVTQ*TRALSTVRKYTCRF
Trigger: GAACCTGCATGTATATTTTCTGACAGTGGAGAGGGCTCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGTTTGTTCATTTTTCCTaGGAAAACCAAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWFVHFS*ENQAAD
Trigger: GTCTGCTGCTTGGTTTTCCCAGGAAAAATGAACAAA...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR GCA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTCTGTTGGTGACACAATaGACCAGAGCCCTCTCCACT +
Preference number: 2 (lower is better)
Translates to: QIGKLRQRANGNMLKATSLLVTQ*TRALST
Trigger: AGTGGAGAGGGCTCTGGTGCATTGTGTCACCAACAG...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACTTTGTTCATTTTTCCTaGGAAAACCAAGCAGCAGAC +
Preference number: 2 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDFVHFS*ENQAAD
Trigger: GTCTGCTGCTTGGTTTTCCCAGGAAAAATGAACAAA...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR TCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCTACAAACCAAATCATTaGATCTCCCCAAATGCAAAG +
Preference number: 2 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCYKPNH*ISPNAK
Trigger: CTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTA...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCACTTGATTTAGGTAAGTaGAACTGTCCTGCAAAATTT +
Preference number: 2 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPLDLGK*NCPAKF
Trigger: AAATTTTGCAGGACAGTTCCACTTACCTAAATCAAG...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR CAA 90 bp CCACTGTCAGAAAATATACATGCAGGTTCACATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAAT +
Preference number: 2 (lower is better)
Translates to: PLSENIHAGSHPSKT*RLMKSTHNSYEEIN
Trigger: ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATGTGAACCTGCATGTATATTTTCTGACAGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR TCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATTACAAACCAAATCATTaGATCTCCCCAAATGCAAAG +
Preference number: 2 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINYKPNH*ISPNAK
Trigger: CTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTA...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CAA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGCATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACA +
Preference number: 3 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWHPSKT*RLMKST
Trigger: TGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATG...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR CCA 72 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATaGTCTAGGAGATCTGTTGGTGACACAATGCACCAG +
Preference number: 3 (lower is better)
Translates to: HPLHCGGLGNKP*SRRSVGDTMHQ
Trigger: CTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CAA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTCCAAGCAGCAGACCCTaGCTTTACAAACCAAATCAT +
Preference number: 3 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVPSSRP*LYKPNH
Trigger: ATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGG...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CAA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACCATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACA +
Preference number: 3 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDHPSKT*RLMKST
Trigger: TGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATG...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR-3UTR CAA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACCAAGCAGCAGACCCTaGCTTTACAAACCAAATCAT +
Preference number: 3 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTPSSRP*LYKPNH
Trigger: ATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR GCA 72 bp ATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATaGACCAGAGCCCTCTCCACTGTCAGAAAATATACA +
Preference number: 3 (lower is better)
Translates to: ISHGLGDLLVTQ*TRALSTVRKYT
Trigger: TGTATATTTTCTGACAGTGGAGAGGGCTCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGATGTGGGCGGGAGCCTaGTGTCTGGCTGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLMWAGA*CLADPK
Trigger: TTTGGGGTCAGCCAGACATCAGGCTCCCGCCCACAT...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGCTTCTGCTAAAGCTGTaGGGACAGGAAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWLLLKL*GQEGQP
Trigger: GGGCTGTCCTTCCTGTCCTCACAGCTTTAGCAGAAG...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGCGGGAGCCTGATGTCTaGCTGACCCCAAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLREPDV*LTPNSA
Trigger: AGCACTGTTTGGGGTCAGCCAGACATCAGGCTCCCG...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGCATGGGAAACAGCAATaGCCAGAGCTTCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWHGKQQ*PELLGT
Trigger: AGTGCCGAGAAGCTCTGGCCATTGCTGTTTCCCATG...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGGCAGCATTGCCAATGTaGAGGGGCTTGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLAALPM*RGLVWV
Trigger: CACCCAGACCAAGCCCCTCCACATTGGCAATGCTGC...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGGCAGCTTCTATCCCATaGTTGGCAGCATTGCCAATG +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWAASIP*LAALPM
Trigger: CATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGC...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTAAAGGCCACGTCCTaGTGGTCCAGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLLKATS*WSSSQL
Trigger: CAGTTGGCTGCTGGACCAGCAGGACGTGGCCTTTAA...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGAAGCAGGGCTCTCTCTaGTACAAGGTGCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWKQGSL*YKVLSH
Trigger: GTGAGAAAGCACCTTGTAGCAGAGAGAGCCCTGCTT...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGACCACGGAAGGGGGATaGAATCTCTTTGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWTTEGG*NLFGMS
Trigger: TGACATGCCAAAGAGATTCCATCCCCCTTCCGTGGT...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTTGGCAGCATTGGCCATaGGTGCCCCAGCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVWQHWP*VPQHGK
Trigger: TTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCA...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACTGGAGGGGCTTGGTCTaGGTGGCAGCATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDWRGLV*VAALAM
Trigger: CATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCA...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR CAA 72 bp CCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTaGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: PFPSSTPCTVEG*VISHGLGDLLV
Trigger: CACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACGGGTGGGTGGCAGGGTaGCACGTGTCATCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDGWVAG*HVSSKS
Trigger: GGATTTTGATGACACGTGGCACCCTGCCACCCACCC...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGTGGAGGGGCTTaGTCTGGGTGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTQCGGA*SGWQHW
Trigger: CCAATGCTGCCACCCAGACCAAGCCCCTCCACATTG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR CAA 72 bp GAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTaGGTGACACAATGCACCAGAGCCCTCTCCACTGTC +
Preference number: 4 (lower is better)
Translates to: EGLVISHGLGDL*VTQCTRALSTV
Trigger: GACAGTGGAGAGGGCTCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGTATTGGCTGGCTATGTaGAACACTTCCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWYWLAM*NTSVVV
Trigger: AACCACTACGGAAGTGTTTCACATAGCCAGCCAATA...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGCTTCAATACCAACATTaGAAGCCAGCAGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWLQYQH*KPAAGQ
Trigger: TTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAG...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCCTGGCATTCATGGAATaGGGGGACAGTGATGCCACC +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCLAFME*GDSDAT
Trigger: GGTGGCATCACTGTCCCCTCATTCCATGAATGCCAG...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACTGGCATTCATGGAATaGGGGGACAGTGATGCCACC +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTLAFME*GDSDAT
Trigger: GGTGGCATCACTGTCCCCTCATTCCATGAATGCCAG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACATGCTTGGCAGCATTaGCAATGTGGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTHAWQH*QCGGAW
Trigger: CCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCCATGCTTGGCAGCATTaGCAATGTGGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCHAWQH*QCGGAW
Trigger: CCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATG...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCGGGGCTTGGTCTGGGTaGCAGCATTGGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLGAWSG*QHWPWV
Trigger: CACCCATGGCCAATGCTGCCACCCAGACCAAGCCCC...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGATCCTCTTGCTCCTCTaGATAACACGATCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLILLLL*ITRSVR
Trigger: CCTGACAGATCGTGTTATTCAGAGGAGCAAGAGGAT...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGAAGCCTGATGTCTGGCTaGCCCCAAACAGTGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRSLMSG*PQTVLD
Trigger: ATCCAGCACTGTTTGGGGTCAGCCAGACATCAGGCT...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGCCCACTTTCAAGCCATaGATTGCTGTGGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLPTFKP*IAVAKL
Trigger: AAGCTTTGCCACAGCAATCCATGGCTTGAAAGTGGG...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTCTTTGGCATGTCATTaGCCTCCTTGGCGAAATGCA +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLSLACH*PPWRNA
Trigger: TGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGA...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTCAATGTGGAGGGGCTTaGTCTGGGTGGCAGCATTGG +
Preference number: 4 (lower is better)
Translates to: QIGKLRQRANGNMLKATSQCGGA*SGWQHW
Trigger: CCAATGCTGCCACCCAGACCAAGCCCCTCCACATTG...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGGCTACATCTAGTGAATaGCAGAGGCAGGATTTAAAC +
Preference number: 4 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWATSSE*QRQDLN
Trigger: GTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGC...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGATGTGGGCGGGAGCCTaGTGTCTGGCTGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMMWAGA*CLADPK
Trigger: TTTGGGGTCAGCCAGACATCAGGCTCCCGCCCACAT...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTCTTCTGCTAAAGCTGTaGGGACAGGAAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: QIGKLRQRANGNMLKATSLLLKL*GQEGQP
Trigger: GGGCTGTCCTTCCTGTCCTCACAGCTTTAGCAGAAG...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTCACAGTACAGTATGTTaGAGCTTGGCAAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVHSTVC*SLASCP
Trigger: CGGACAACTTGCCAAGCTTCAACATACTGTACTGTG...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGAGCCTCCTTGGCGAAATaGAGTAATCGGCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRASLAK*SNRPCT
Trigger: AGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGC...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTCTCTCTGCTACAAGGTaGTTTCTCACAGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVLSATR*FLTDAA
Trigger: AGCTGCATCTGTGAGAAAGCACCTTGTAGCAGAGAG...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCTGTCATTGGCCTCCTTaGCGAAATGCAGTAATCGGC +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCCHWPP*RNAVIG
Trigger: GCCGATTACTGCATTTCGCCAAGGAGGCCAATGACA...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTGGGGCTTGGTCTGGGTaGCAGCATTGGCCATGGGTG +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSGAWSG*QHWPWV
Trigger: CACCCATGGCCAATGCTGCCACCCAGACCAAGCCCC...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTTGGAGGGGCTTGGTCTaGGTGGCAGCATTGGCCATG +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSWRGLV*VAALAM
Trigger: CATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCA...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGAGTCCTCCTGGCTCAGTaGTTTTCTCCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRVLLAQ*FSPVPI
Trigger: TATGGGCACTGGAGAAAACCACTGAGCCAGGAGGAC...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCATCCTCTTGCTCCTCTaGATAACACGATCTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCILLLL*ITRSVR
Trigger: CCTGACAGATCGTGTTATTCAGAGGAGCAAGAGGAT...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCGGAATGAGGGGACAGTaGTGCCACCATCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLGMRGQ*CHHQAA
Trigger: TGCTGCTTGATGGTGGCATCACTGTCCCCTCATTCC...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACACAGTACAGTATGTTaGAGCTTGGCAAGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTHSTVC*SLASCP
Trigger: CGGACAACTTGCCAAGCTTCAACATACTGTACTGTG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCGCTGACCCCAAACAGTaGTGGATATGTTGGAACTGT +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCADPKQ*WICWNC
Trigger: ACAGTTCCAACATATCCAGCACTGTTTGGGGTCAGC...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATCCAAGTCCAAGACCTaGTTGTTTCCTTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRSKSKT*LFPWRP
Trigger: GGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCCCAGTAGCACCCCTTaGACTGTGGAGGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMPSSTP*TVEGLV
Trigger: TACCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCGGGAGCCTGATGTCTaGCTGACCCCAAACAGTGCT +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMREPDV*LTPNSA
Trigger: AGCACTGTTTGGGGTCAGCCAGACATCAGGCTCCCG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACCTTAATGTAGTCAGTTaGAAGCAGGGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDLNVVS*KQGSLC
Trigger: GCAGAGAGAGCCCTGCTTCCAACTGACTACATTAAG...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATGTGGCCTGTTGATCTaGCATTCATGGAATGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRCGLLI*HSWNEG
Trigger: CCCCTCATTCCATGAATGCCAGATCAACAGGCCACA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCCAGTATGTTGAAGCTTaGCAAGTTGTCCGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCQYVEA*QVVRRV
Trigger: TACCCTCCGGACAACTTGCCAAGCTTCAACATACTG...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACCTTCAATACCAACATTaGAAGCCAGCAGCAGGTCAA +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDLQYQH*KPAAGQ
Trigger: TTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAG...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGAACATACTGGAATGAATaGCGGGCTTCATGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRTYWNE*RASCSE
Trigger: TTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGT...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCATCACCTGTGGCCTGTTaGTCTGGCATTCATGGAATG +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPSPVAC*SGIHGM
Trigger: CATTCCATGAATGCCAGATCAACAGGCCACAGGTGA...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTTGCAGTAATCGGCCTTaGACTTCAATACCAACATTG +
Preference number: 4 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVCSNRP*TSIPTL
Trigger: CAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCA...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCGCCTCCTTGGCGAAATaGAGTAATCGGCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLASLAK*SNRPCT
Trigger: AGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGC...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTAGCATTGGCCATGGGTaGCCCAGCATGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSSIGHG*PSMGNS
Trigger: GCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCT...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGCAACATTGCCAAAAATaGAGCTTCTATCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLQHCQK*SFYPML
Trigger: AAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTG...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGACTTCTATCCCATGCTTaGCAGCATTGCCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRLLSHA*QHCQCG
Trigger: TCCACATTGGCAATGCTGCCAAGCATGGGATAGAAG...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACCTGCTTGTTTCCTTaGAGACCCAACATTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDTCLFP*RPNIAK
Trigger: TTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGT...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGGCTTGGAAGGACTTTTaGGGAATAGTTGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: STPCTVEGLVISHGLGDLAWKDF*GIVGIK
Trigger: TTTTATGCCAACTATTCCCCAAAAGTCCTTCCAAGC...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACGGCCTGTTTACATACTaGACATTTGGTATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDGLFTY*TFGILS
Trigger: GCTCAGGATACCAAATGTCCAGTATGTAAACAGGCC...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTTTCATGCTCCGAAACTaGAAAGGGCCTGTTTACATA +
Preference number: 4 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVFMLRN*KGPVYI
Trigger: TATGTAAACAGGCCCTTTCCAGTTTCGGAGCATGAA...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCACCCACTTTCAAGCCATaGATTGCTGTGGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPPTFKP*IAVAKL
Trigger: AAGCTTTGCCACAGCAATCCATGGCTTGAAAGTGGG...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCTCTTGCTATATTGGCTaGCTATGTGAAACACTTCCG +
Preference number: 4 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCSCYIG*LCETLP
Trigger: CGGAAGTGTTTCACATAGCCAGCCAATATAGCAAGA...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGAGACCCCAAACAGTGCTaGATATGTTGGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRDPKQC*ICWNCR
Trigger: TCTACAGTTCCAACATATCCAGCACTGTTTGGGGTC...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACAGTAGGAAGCTATGCTTaGAAGGACTTTTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTVGSYA*KDFWGI
Trigger: TATTCCCCAAAAGTCCTTCCAAGCATAGCTTCCTAC...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATTGATCTGGCATTCATaGAATGAGGGGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRLIWHS*NEGTVM
Trigger: CATCACTGTCCCCTCATTCCATGAATGCCAGATCAA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCTGTGGCCTGTTGATCTaGCATTCATGGAATGAGGGG +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLCGLLI*HSWNEG
Trigger: CCCCTCATTCCATGAATGCCAGATCAACAGGCCACA...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTGTCCTCCTGGCTCAGTaGTTTTCTCCAGTGCCCATA +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSVLLAQ*FSPVPI
Trigger: TATGGGCACTGGAGAAAACCACTGAGCCAGGAGGAC...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACTTGGTAATAAGCCATaGTCTAGGAGATCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTLGNKP*SRRSVG
Trigger: ACCAACAGATCTCCTAGACCATGGCTTATTACCAAG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCATATTGGCTGGCTATGTaGAACACTTCCGTAGTGGTT +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPYWLAM*NTSVVV
Trigger: AACCACTACGGAAGTGTTTCACATAGCCAGCCAATA...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCATCAAAATCCATGGAGTaGATAGCCACACCGTTCACA +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPSKSME*IATPFT
Trigger: TGTGAACGGTGTGGCTATTCACTCCATGGATTTTGA...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTGGCCACATACTGGAATaGATGACGGGCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSGHILE*MTGFML
Trigger: GAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCC...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGACTTTTTACTTCGGCTTaGCAAATAGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRLFTSA*QIGKLR
Trigger: CCTCAGTTTCCCTATTTGTCAAGCCGAAGTAAAAAG...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGGGTGGGTGGCAGGGTaGCACGTGTCATCAAAATCC +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLGWVAG*HVSSKS
Trigger: GGATTTTGATGACACGTGGCACCCTGCCACCCACCC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGGCAGCTTCTATCCCATaGTTGGCAGCATTGCCAATG +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMAASIP*LAALPM
Trigger: CATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGC...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGAAGCAGGGCTCTCTCTaGTACAAGGTGCTTTCTCAC +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMKQGSL*YKVLSH
Trigger: GTGAGAAAGCACCTTGTAGCAGAGAGAGCCCTGCTT...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTCTGTTGGTGACACAATaGACCAGAGCCCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSLLVTQ*TRALST
Trigger: AGTGGAGAGGGCTCTGGTGCATTGTGTCACCAACAG...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCAGACCCCAAACAGTGCTaGATATGTTGGAACTGTAGA +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPDPKQC*ICWNCR
Trigger: TCTACAGTTCCAACATATCCAGCACTGTTTGGGGTC...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTGTCATTGGCCTCCTTaGCGAAATGCAGTAATCGGC +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMCHWPP*RNAVIG
Trigger: GCCGATTACTGCATTTCGCCAAGGAGGCCAATGACA...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCTTCTATCCCATGCTTaGCAGCATTGCCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLLLSHA*QHCQCG
Trigger: TCCACATTGGCAATGCTGCCAAGCATGGGATAGAAG...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCAACCTGCTTGTTTCCTTaGAGACCCAACATTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPTCLFP*RPNIAK
Trigger: TTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGT...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACAGCTTGGAAGGACTTTTaGGGAATAGTTGGCATAAAA +
Preference number: 4 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTAWKDF*GIVGIK
Trigger: TTTTATGCCAACTATTCCCCAAAAGTCCTTCCAAGC...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCTTAATGTAGTCAGTTaGAAGCAGGGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLLNVVS*KQGSLC
Trigger: GCAGAGAGAGCCCTGCTTCCAACTGACTACATTAAG...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTTTGATCTGGCATTCATaGAATGAGGGGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: QIGKLRQRANGNMLKATSLIWHS*NEGTVM
Trigger: CATCACTGTCCCCTCATTCCATGAATGCCAGATCAA...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGGAATGAGGGGACAGTaGTGCCACCATCAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLGMRGQ*CHHQAA
Trigger: TGCTGCTTGATGGTGGCATCACTGTCCCCTCATTCC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTTCACCTGTGGCCTGTTaGTCTGGCATTCATGGAATG +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSSPVAC*SGIHGM
Trigger: CATTCCATGAATGCCAGATCAACAGGCCACAGGTGA...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATAGCATTGGCCATGGGTaGCCCAGCATGGGAAACAGC +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINSIGHG*PSMGNS
Trigger: GCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCT...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCTCTCTGCTACAAGGTaGTTTCTCACAGATGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMLSATR*FLTDAA
Trigger: AGCTGCATCTGTGAGAAAGCACCTTGTAGCAGAGAG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTAAGGCCAGAAAACTTTaGACTCCTTGGCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSKARKL*TPWQGF
Trigger: GAAGCCCTGCCAAGGAGTCCAAAGTTTTCTGGCCTT...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGCAGCATTGCCAATGTaGAGGGGCTTGGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINAALPM*RGLVWV
Trigger: CACCCAGACCAAGCCCCTCCACATTGGCAATGCTGC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTTTCATGCTCCGAAACTaGAAAGGGCCTGTTTACATA +
Preference number: 4 (lower is better)
Translates to: QIGKLRQRANGNMLKATSFMLRN*KGPVYI
Trigger: TATGTAAACAGGCCCTTTCCAGTTTCGGAGCATGAA...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCAGTATGTTGAAGCTTaGCAAGTTGTCCGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSQYVEA*QVVRRV
Trigger: TACCCTCCGGACAACTTGCCAAGCTTCAACATACTG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCACTTGGTAATAAGCCATaGTCTAGGAGATCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPLGNKP*SRRSVG
Trigger: ACCAACAGATCTCCTAGACCATGGCTTATTACCAAG...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTTCAAAATCCATGGAGTaGATAGCCACACCGTTCACA +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSSKSME*IATPFT
Trigger: TGTGAACGGTGTGGCTATTCACTCCATGGATTTTGA...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGGCCACATACTGGAATaGATGACGGGCTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLGHILE*MTGFML
Trigger: GAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCATTGGAGACCCAACATTaGCAAAAATGCAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPLETQH*QKCSFY
Trigger: ATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAA...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCAGTTCTAGAGCCAAAATaGGATTTTTCCAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPVLEPK*DFSRLL
Trigger: AAGCAGTCTGGAAAAATCGCATTTTGGCTCTAGAAC...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTACATGGGAAACAGCAATaGCCAGAGCTTCTCGGCACT +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLHGKQQ*PELLGT
Trigger: AGTGCCGAGAAGCTCTGGCCATTGCTGTTTCCCATG...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGGGCCTGTTTACATACTaGACATTTGGTATCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMGLFTY*TFGILS
Trigger: GCTCAGGATACCAAATGTCCAGTATGTAAACAGGCC...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCTTTTTACTTCGGCTTaGCAAATAGGGAAACTGAGG +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSLFTSA*QIGKLR
Trigger: CCTCAGTTTCCCTATTTGTCAAGCCGAAGTAAAAAG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTTCTTGCTATATTGGCTaGCTATGTGAAACACTTCCG +
Preference number: 4 (lower is better)
Translates to: AADPCFTNQIIESPQMQSSCYIG*LCETLP
Trigger: CGGAAGTGTTTCACATAGCCAGCCAATATAGCAAGA...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAACCACGGAAGGGGGATaGAATCTCTTTGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLTTEGG*NLFGMS
Trigger: TGACATGCCAAAGAGATTCCATCCCCCTTCCGTGGT...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGCGTCTGCCACCCAGTaGGTAGATAAATGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINASATQ*VDKCAG
Trigger: TCCTGCACATTTATCTACCCACTGGGTGGCAGACGC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCAACATTGCCAAAAATaGAGCTTCTATCCCATGCTT +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMQHCQK*SFYPML
Trigger: AAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTTGGAGACCCAACATTaGCAAAAATGCAGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMLETQH*QKCSFY
Trigger: ATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAA...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATTCCAAGTCCAAGACCTaGTTGTTTCCTTGGAGACCC +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINSKSKT*LFPWRP
Trigger: GGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGA...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATAAGGCCAGAAAACTTTaGACTCCTTGGCAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINKARKL*TPWQGF
Trigger: GAAGCCCTGCCAAGGAGTCCAAAGTTTTCTGGCCTT...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTATCTTTGGCATGTCATTaGCCTCCTTGGCGAAATGCA +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLSLACH*PPWRNA
Trigger: TGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGA...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGGGATGGAATCTCTTTaGCATGTCATTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLGMESL*HVIGLL
Trigger: AAGGAGGCCAATGACATGCCAAAGAGATTCCATCCC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTTTGTTCATTTTTCCTaGGAAAACCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMFVHFS*ENQAAD
Trigger: GTCTGCTGCTTGGTTTTCCCAGGAAAAATGAACAAA...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATACATACTGGAATGAATaGCGGGCTTCATGCTCCGAA +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINTYWNE*RASCSE
Trigger: TTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGT...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTACAAACCAAATCATTaGATCTCCCCAAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMYKPNH*ISPNAK
Trigger: CTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTA...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGGGATGGAATCTCTTTaGCATGTCATTGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINGMESL*HVIGLL
Trigger: AAGGAGGCCAATGACATGCCAAAGAGATTCCATCCC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTTTTGTTCATTTTTCCTaGGAAAACCAAGCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSFVHFS*ENQAAD
Trigger: GTCTGCTGCTTGGTTTTCCCAGGAAAAATGAACAAA...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR TCA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTTACAAACCAAATCATTaGATCTCCCCAAATGCAAAG +
Preference number: 4 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSYKPNH*ISPNAK
Trigger: CTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTA...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGTAGGAAGCTATGCTTaGAAGGACTTTTGGGGAATA +
Preference number: 4 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLVGSYA*KDFWGI
Trigger: TATTCCCCAAAAGTCCTTCCAAGCATAGCTTCCTAC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCTTGATTTAGGTAAGTaGAACTGTCCTGCAAAATTT +
Preference number: 4 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMLDLGK*NCPAKF
Trigger: AAATTTTGCAGGACAGTTCCACTTACCTAAATCAAG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
3UTR CAA 72 bp GAAAATATACATGCAGGTTCACATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACACATAATTCCTATGAA +
Preference number: 4 (lower is better)
Translates to: ENIHAGSHPSKT*RLMKSTHNSYE
Trigger: TTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATGTGAACCTGCATGTATATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATTGCAGTAATCGGCCTTaGACTTCAATACCAACATTG +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINCSNRP*TSIPTL
Trigger: CAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCA...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGCTACATCTAGTGAATaGCAGAGGCAGGATTTAAAC +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINATSSE*QRQDLN
Trigger: GTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR GCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGTTCTAGAGCCAAAATaGGATTTTTCCAGACTGCTT +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINVLEPK*DFSRLL
Trigger: AAGCAGTCTGGAAAAATCGCATTTTGGCTCTAGAAC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATCAGTGCTGGATATGTTaGAACTGTAGATCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINQCWIC*NCRSCY
Trigger: ATAGCAAGATCTACAGTTCCAACATATCCAGCACTG...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CCA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATCTTGATTTAGGTAAGTaGAACTGTCCTGCAAAATTT +
Preference number: 4 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINLDLGK*NCPAKF
Trigger: AAATTTTGCAGGACAGTTCCACTTACCTAAATCAAG...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp GCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATGGGTaGCCCAGCATGGGAAACAGCAATGGCCAGAGCTTCTCGGCACTT +
Preference number: 5 (lower is better)
Translates to: ANVEGLGLGGSIGHG*PSMGNSNGQSFSAL
Trigger: AAGTGCCGAGAAGCTCTGGCCATTGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp CATTGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATaGGTGCCCCAGCATGGGAAACAGCAATGGCCAGAGCTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: HCQCGGAWSGWQHWP*VPQHGKQQWPELLG
Trigger: GCCGAGAAGCTCTGGCCATTGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp AGGGGCTTGGTCTGGGTGGCAGCATTGGCCATGGGTGCCCCAGCATaGGAAACAGCAATGGCCAGAGCTTCTCGGCACTTTGTCGAGCTA +
Preference number: 5 (lower is better)
Translates to: RGLVWVAALAMGAPA*ETAMARASRHFVEL
Trigger: TAGCTCGACAAAGTGCCGAGAAGCTCTGGCCATTGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp TCTATCCCATGCTTGGCAGCATTGCCAATGTGGAGGGGCTTGGTCTaGGTGGCAGCATTGGCCATGGGTGCCCCAGCATGGGAAACAGCA +
Preference number: 5 (lower is better)
Translates to: SIPCLAALPMWRGLV*VAALAMGAPAWETA
Trigger: TGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp CAGCTTCTATCCCATGCTTGGCAGCATTGCCAATGTGGAGGGGCTTaGTCTGGGTGGCAGCATTGGCCATGGGTGCCCCAGCATGGGAAA +
Preference number: 5 (lower is better)
Translates to: QLLSHAWQHCQCGGA*SGWQHWPWVPQHGK
Trigger: TTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp CCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTTGGCAGCATTaGCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATGG +
Preference number: 5 (lower is better)
Translates to: PTLPKMQLLSHAWQH*QCGGAWSGWQHWPW
Trigger: CCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTCCATGCTTGGCAGCATaGCCAATGTGGAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVPCLAA*PMWRGL
Trigger: CAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGG...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGGGTCTAGGAGATCTGTaGGTGACACAATGCACCAGA +
Preference number: 5 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWGLGDL*VTQCTR
Trigger: TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACC...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 90 bp GGCTTTCCACTGTGTCCCAGGACAGCATCTTGGAGGCATTGGCTCTaGACTTTTCCTCTAGGTCCTCCTGGCTCAGTGGTTTTCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GFPLCPRTASWRHWL*TFPLGPPGSVVFSS
Trigger: ACTGGAGAAAACCACTGAGCCAGGAGGACCTAGAGGAAAAGTTCAGAGCCAATGCCTCCAAGATGCTGTCCTGGGACACAGTGGAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp CTTGGAGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTTaGCAGCATTGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LGDPTLPKMQLLSHA*QHCQCGGAWSGWQH
Trigger: ATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGACCAATGTGGAGGGGCTaGGTCTGGGTGGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRPMWRG*VWVAAL
Trigger: CAATGCTGCCACCCAGACCAAGCCCCTCCACATTGG...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 90 bp AGTGATGCCACCATCAAGCAGCATGGCACAGGCCACATACTGGAATaGATGACGGGCTTCATGCTCCGAAACTGGAAAGGGCCTGTTTAC +
Preference number: 5 (lower is better)
Translates to: SDATIKQHGTGHILE*MTGFMLRNWKGPVY
Trigger: GTAAACAGGCCCTTTCCAGTTTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCCTGTGCCATGCTGCTTGATGGTGGCATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp TTTCCTTGGAGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATaGTTGGCAGCATTGCCAATGTGGAGGGGCTTGGTCTGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FPWRPNIAKNAASIP*LAALPMWRGLVWVA
Trigger: TGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGCTTCTATCCCATGCTaGGCAGCATTGCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVASIPC*AALPMW
Trigger: CCACATTGGCAATGCTGCCAAGCATGGGATAGAAGC...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCTTGAAGCTTGGCAAGTaGTCCGGAGGGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCLKLGK*SGGYSS
Trigger: GCTGGAGTACCCTCCGGACAACTTGCCAAGCTTCAA...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 90 bp ATGCCACCATCAAGCAGCATGGCACAGGCCACATACTGGAATGAATaGCGGGCTTCATGCTCCGAAACTGGAAAGGGCCTGTTTACATAC +
Preference number: 5 (lower is better)
Translates to: MPPSSSMAQATYWNE*RASCSETGKGLFTY
Trigger: GTATGTAAACAGGCCCTTTCCAGTTTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCCTGTGCCATGCTGCTTGATGGTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp GTCCAAGACCTGCTTGTTTCCTTGGAGACCCAACATTGCCAAAAATaGAGCTTCTATCCCATGCTTGGCAGCATTGCCAATGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: VQDLLVSLETQHCQK*SFYPMLGSIANVEG
Trigger: CCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp CACACCGTTCACAAAAGCAGCATATGTGGGCGGGAGCCTGATGTCTaGCTGACCCCAAACAGTGCTGGATATGTTGGAACTGTAGATCTT +
Preference number: 5 (lower is better)
Translates to: HTVHKSSICGREPDV*LTPNSAGYVGTVDL
Trigger: AAGATCTACAGTTCCAACATATCCAGCACTGTTTGGGGTCAGCCAGACATCAGGCTCCCGCCCACATATGCTGCTTTTGTGAACGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGGTAGATCTTGCTATATaGGCTGGCTATGTGAAACAC +
Preference number: 5 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWVDLAI*AGYVKH
Trigger: GTGTTTCACATAGCCAGCCAATATAGCAAGATCTAC...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACAGGGGATGGAATCTCTTaGGCATGTCATTGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTGDGIS*ACHWPP
Trigger: AGGAGGCCAATGACATGCCAAAGAGATTCCATCCCC...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACGCTTCTATCCCATGCTaGGCAGCATTGCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDASIPC*AALPMW
Trigger: CCACATTGGCAATGCTGCCAAGCATGGGATAGAAGC...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGATTTAAACCCACCCATTCCCCAGTAGCACCCCTTGCACTGTGGAGGGCTTGGTGCTTGGAAGGACTTTaGGGGAATAGTTGGCATAAA +
Preference number: 5 (lower is better)
Translates to: GFKPTHSPVAPLALWRAWCLEGL*GNSWHK
Trigger: TTTATGCCAACTATTCCCCAAAAGTCCTTCCAAGCA...CCAAGCCCTCCACAGTGCAAGGGGTGCTACTGGGGAATGGGTGGGTTTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATCCCAGGACAGCATCTaGGAGGCATTGGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRSQDSI*EALALN
Trigger: GTTCAGAGCCAATGCCTCCAAGATGCTGTCCTGGGA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp TTTGGCATGTCATTGGCCTCCTTGGCGAAATGCAGTAATCGGCCTTaGACTTCAATACCAACATTGAAAGCCAGCAGCAGGTCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: FGMSLASLAKCSNRP*TSIPTLKASSRSRP
Trigger: TGGCCTTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp GGGGGATGGAATCTCTTTGGCATGTCATTGGCCTCCTTGGCGAAATaGAGTAATCGGCCTTGCACTTCAATACCAACATTGAAAGCCAGC +
Preference number: 5 (lower is better)
Translates to: GGWNLFGMSLASLAK*SNRPCTSIPTLKAS
Trigger: GCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp AAGGCCCCAAATCCTGCCTCCAAGTCCAAGACCTGCTTGTTTCCTTaGAGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTTG +
Preference number: 5 (lower is better)
Translates to: KAPNPASKSKTCLFP*RPNIAKNAASIPCL
Trigger: CAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAGGATTTGGGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp AGCACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGACTTCAATACCAACATaGAAAGCCAGCAGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: STPCTVEGLVISHGLGDLTSIPT*KASSRS
Trigger: TGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGT...CAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCATGTCATTGGCCTCCTaGGCGAAATGCAGTAATCGG +
Preference number: 5 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCMSLAS*AKCSNR
Trigger: CCGATTACTGCATTTCGCCAAGGAGGCCAATGACAT...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCCAATGTGGAGGGGCTaGGTCTGGGTGGCAGCATTG +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSPMWRG*VWVAAL
Trigger: CAATGCTGCCACCCAGACCAAGCCCCTCCACATTGG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CAAATAGGGAAACTGAGGCAGAGGGCTAATGGTAACATGCTCAAGGCTACATCTTTGAAGCTTGGCAAGTaGTCCGGAGGGTACTCCAGC +
Preference number: 5 (lower is better)
Translates to: QIGKLRQRANGNMLKATSLKLGK*SGGYSS
Trigger: GCTGGAGTACCCTCCGGACAACTTGCCAAGCTTCAA...AGATGTAGCCTTGAGCATGTTACCATTAGCCCTCTGCCTCAGTTTCCCTATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 90 bp AGGAACCCAGCACCCAGAGTGTCTAGAATCATCCTCTTGCTCCTCTaGATAACACGATCTGTCAGGTGTCCCACTTTCAAGCCATGGATT +
Preference number: 5 (lower is better)
Translates to: RNPAPRVSRIILLLL*ITRSVRCPTFKPWI
Trigger: AATCCATGGCTTGAAAGTGGGACACCTGACAGATCGTGTTATTCAGAGGAGCAAGAGGATGATTCTAGACACTCTGGGTGCTGGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 90 bp CCTTGGCGAAATGCAGTAATCGGCCTTGCACTTCAATACCAACATTaGAAGCCAGCAGCAGGTCAAGGCCAGAAAACTTTGGACTCCTTG +
Preference number: 5 (lower is better)
Translates to: PWRNAVIGLALQYQH*KPAAGQGQKTLDSL
Trigger: CAAGGAGTCCAAAGTTTTCTGGCCTTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp TGCCTCCAAGTCCAAGACCTGCTTGTTTCCTTGGAGACCCAACATTaGCAAAAATGCAGCTTCTATCCCATGCTTGGCAGCATTGCCAAT +
Preference number: 5 (lower is better)
Translates to: CLQVQDLLVSLETQH*QKCSFYPMLGSIAN
Trigger: ATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCACTCTTTGGCATGTCATaGGCCTCCTTGGCGAAATGC +
Preference number: 5 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPLFGMS*ASLAKC
Trigger: GCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAG...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCCATGCTTGGCAGCATaGCCAATGTGGAGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSPCLAA*PMWRGL
Trigger: CAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CACCCCTTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTTGTAGGAAGCTATGCTaGGAAGGACTTTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: HPLHCGGLGNKPWSRRSVCRKLC*EGLLGN
Trigger: ATTCCCCAAAAGTCCTTCCAAGCATAGCTTCCTACA...AACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAAGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACAGCATCTTGGAGGCATaGGCTCTGAACTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDSILEA*ALNFSS
Trigger: AGAGGAAAAGTTCAGAGCCAATGCCTCCAAGATGCT...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TTGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACGGTGGAGAGGGTCCTTaGAGAAGTGTAGTTAACACA +
Preference number: 5 (lower is better)
Translates to: LHCGGLGNKPWSRRSVGDGGEGP*RSVVNT
Trigger: TGTGTTAACTACACTTCTCAAAGGACCCTCTCCACC...GTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTHPSKT*RLMKST
Trigger: TGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATGCACTGTGGAGGGCTaGGTAATAAGCCATGGTCTA +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRCTVEG*VISHGL
Trigger: TAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TGCACTGTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACTTGGAGACCCAACATaGCCAAAAATGCAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: CTVEGLVISHGLGDLLVTLGDPT*PKMQLL
Trigger: TAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAG...TGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCAGACCTGCTTGTTTCCTaGGAGACCCAACATTGCCAA +
Preference number: 5 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPDLLVS*ETQHCQ
Trigger: TTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTC...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGTAACATGCTCAAGGCTACATCTAGTGAATGGCAGAGGCAGGATTTAAACCCACTCACCTGTGGCCTGTaGATCTGGCATTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: GNMLKATSSEWQRQDLNPLTCGL*IWHSWN
Trigger: ATTCCATGAATGCCAGATCAACAGGCCACAGGTGAG...TGGGTTTAAATCCTGCCTCTGCCATTCACTAGATGTAGCCTTGAGCATGTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GTGGAGGGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCCCAAGCAGCAGACCCTaGCTTTACAAACCAAATCAT +
Preference number: 5 (lower is better)
Translates to: VEGLVISHGLGDLLVTQCPSSRP*LYKPNH
Trigger: ATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGG...GCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCCCTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGACATCCCTCTAAAACCTaGAGGCTCATGAAGTCCACA +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRHPSKT*RLMKST
Trigger: TGTGGACTTCATGAGCCTCAAGGTTTTAGAGGGATG...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 90 bp CTGGACATTTGGTATCCTGAGCACAATTCTCTTAATGTAGTCAGTTaGAAGCAGGGCTCTCTCTGCTACAAGGTGCTTTCTCACAGATGC +
Preference number: 5 (lower is better)
Translates to: LDIWYPEHNSLNVVS*KQGSLCYKVLSHRC
Trigger: GCATCTGTGAGAAAGCACCTTGTAGCAGAGAGAGCCCTGCTTCCAACTGACTACATTAAGAGAATTGTGCTCAGGATACCAAATGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCAAGGCCAGAAAACTTaGGACTCCTTGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMQGQKT*DSLAGL
Trigger: AAGCCCTGCCAAGGAGTCCAAAGTTTTCTGGCCTTG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGACTTGGAGACCCAACATaGCCAAAAATGCAGCTTCTA +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRLGDPT*PKMQLL
Trigger: TAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAG...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATGTAGGAAGCTATGCTaGGAAGGACTTTTGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRCRKLC*EGLLGN
Trigger: ATTCCCCAAAAGTCCTTCCAAGCATAGCTTCCTACA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCGGTCTAGGAGATCTGTaGGTGACACAATGCACCAGA +
Preference number: 5 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLGLGDL*VTQCTR
Trigger: TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACC...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp CCTGGGAAAACCAAGCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCAAAACTTTGGACTCCTaGGCAGGGCTTCTGCTAAAG +
Preference number: 5 (lower is better)
Translates to: PGKTKQQTLALQTKSLNLKTLDS*AGLLLK
Trigger: CTTTAGCAGAAGCCCTGCCAAGGAGTCCAAAGTTTT...GAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGGTTTTCCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTCAAGGCCAGAAAACTTaGGACTCCTTGGCAGGGCTT +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSQGQKT*DSLAGL
Trigger: AAGCCCTGCCAAGGAGTCCAAAGTTTTCTGGCCTTG...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTATGTCATTGGCCTCCTaGGCGAAATGCAGTAATCGG +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSMSLAS*AKCSNR
Trigger: CCGATTACTGCATTTCGCCAAGGAGGCCAATGACAT...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTCTCTTTGGCATGTCATaGGCCTCCTTGGCGAAATGC +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSLFGMS*ASLAKC
Trigger: GCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAG...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTGGGGATGGAATCTCTTaGGCATGTCATTGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSGDGIS*ACHWPP
Trigger: AGGAGGCCAATGACATGCCAAAGAGATTCCATCCCC...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GGCTTGGTAATAAGCCATGGTCTAGGAGATCTGTTGGTGACACAATGCACCAGATGCTTGGAAGGACTTTaGGGGAATAGTTGGCATAAA +
Preference number: 5 (lower is better)
Translates to: GLVISHGLGDLLVTQCTRCLEGL*GNSWHK
Trigger: TTTATGCCAACTATTCCCCAAAAGTCCTTCCAAGCA...TCTGGTGCATTGTGTCACCAACAGATCTCCTAGACCATGGCTTATTACCAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCTCACCTGTGGCCTGTaGATCTGGCATTCATGGAAT +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSLTCGL*IWHSWN
Trigger: ATTCCATGAATGCCAGATCAACAGGCCACAGGTGAG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTGCACTGTGGAGGGCTaGGTAATAAGCCATGGTCTA +
Preference number: 5 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMCTVEG*VISHGL
Trigger: TAGACCATGGCTTATTACCAAGCCCTCCACAGTGCA...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 90 bp CTGAATAACACGATCTGTCAGGTGTCCCACTTTCAAGCCATGGATTaGTGTGGCAAAGCTTTCTGTGATAGACTTGAGCATCATTTCGTT +
Preference number: 5 (lower is better)
Translates to: LNNTICQVSHFQAMD*CGKAFCDRLEHHFV
Trigger: AACGAAATGATGCTCAAGTCTATCACAGAAAGCTTTGCCACAGCAATCCATGGCTTGAAAGTGGGACACCTGACAGATCGTGTTATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377462.6
CDS-3UTR CAA 90 bp GTAAGTGGAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGCTTTCAAGCCATGGATaGCTGTGGCAAAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VSGTVLQNFQEKAPSRYMLSSHG*LWQSFL
Trigger: CAGAAAGCTTTGCCACAGCAATCCATGGCTTGAAAG...CATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTCCACTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTGGTGGAGAGGGTCCTTaGAGAAGTGTAGTTAACACA +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSGGEGP*RSVVNT
Trigger: TGTGTTAACTACACTTCTCAAAGGACCCTCTCCACC...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTAGCATCTTGGAGGCATaGGCTCTGAACTTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSSILEA*ALNFSS
Trigger: AGAGGAAAAGTTCAGAGCCAATGCCTCCAAGATGCT...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATTCCCAGGACAGCATCTaGGAGGCATTGGCTCTGAAC +
Preference number: 5 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINSQDSI*EALALN
Trigger: GTTCAGAGCCAATGCCTCCAAGATGCTGTCCTGGGA...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCCAAGCAGCAGACCCTaGCTTTACAAACCAAATCAT +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSPSSRP*LYKPNH
Trigger: ATGATTTGGTTTGTAAAGCAAGGGTCTGCTGCTTGG...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTGTAGATCTTGCTATATaGGCTGGCTATGTGAAACAC +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSVDLAI*AGYVKH
Trigger: GTGTTTCACATAGCCAGCCAATATAGCAAGATCTAC...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTACTTCAATACCAACATaGAAAGCCAGCAGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSTSIPT*KASSRS
Trigger: TGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGT...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTCTAAGTCCTAAAAACTaGGATGCAGCAGCAGCACTA +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSLSPKN*DAAAAL
Trigger: TAGTGCTGCTGCTGCATCCAAGTTTTTAGGACTTAG...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAAAGTCCAAGACCTGCTaGTTTCCTTGGAGACCCAAC +
Preference number: 5 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLKSKTC*FPWRPN
Trigger: GTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTT...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GCAGCAGACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTGCTTTTTACTTCGGCTaGACAAATAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: AADPCFTNQIIESPQMQSAFYFG*TNRETE
Trigger: CTCAGTTTCCCTATTTGTCAAGCCGAAGTAAAAAGC...ACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTCTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATGACCTGCTTGTTTCCTaGGAGACCCAACATTGCCAA +
Preference number: 5 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINDLLVS*ETQHCQ
Trigger: TTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTC...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATAAGTCCAAGACCTGCTaGTTTCCTTGGAGACCCAAC +
Preference number: 5 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINKSKTC*FPWRPN
Trigger: GTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTT...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GAACTGTCCTGCAAAATTTTCAGGAGAAGGCTCCTTCCAGATATATGTAGTTCTCTGAAAGGTGATATATaGCAGTGCTTAAGACCATGG +
Preference number: 5 (lower is better)
Translates to: ELSCKIFRRRLLPDICSSLKGDI*QCLRPW
Trigger: CCATGGTCTTAAGCACTGCAATATATCACCTTTCAG...AGAACTACATATATCTGGAAGGAGCCTTCTCCTGAAAATTTTGCAGGACAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATCTTTCAAGCCATGGATaGCTGTGGCAAAGCTTTCTG +
Preference number: 5 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINLSSHG*LWQSFL
Trigger: CAGAAAGCTTTGCCACAGCAATCCATGGCTTGAAAG...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp GACCCTTGCTTTACAAACCAAATCATTGAATCTCCCCAAATGCAAAGTCATTTAGCTTTTTACTTCGGCTaGACAAATAGGGAAACTGAG +
Preference number: 5 (lower is better)
Translates to: DPCFTNQIIESPQMQSHLAFYFG*TNRETE
Trigger: CTCAGTTTCCCTATTTGTCAAGCCGAAGTAAAAAGC...TAAATGACTTTGCATTTGGGGAGATTCAATGATTTGGTTTGTAAAGCAAGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS-3UTR CAA 90 bp TCTAAAACCTTGAGGCTCATGAAGTCCACACATAATTCCTATGAAGAGATTAATCTGAAAGGTGATATATaGCAGTGCTTAAGACCATGG +
Preference number: 5 (lower is better)
Translates to: SKTLRLMKSTHNSYEEINLKGDI*QCLRPW
Trigger: CCATGGTCTTAAGCACTGCAATATATCACCTTTCAG...ATTAATCTCTTCATAGGAATTATGTGTGGACTTCATGAGCCTCAAGGTTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp TGTGGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATaGGTGCCCCAGCATGGGAAACAGCAATGGCCAGAG +
Preference number: 6 (lower is better)
Translates to: CGGAWSGWQHWP*VPQHGKQQWPE
Trigger: CTCTGGCCATTGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp TGCTTGGCAGCATTGCCAATGTGGAGGGGCTTGGTCTaGGTGGCAGCATTGGCCATGGGTGCCCCAGCATGG +
Preference number: 6 (lower is better)
Translates to: CLAALPMWRGLV*VAALAMGAPAW
Trigger: CCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp TCCCATGCTTGGCAGCATTGCCAATGTGGAGGGGCTTaGTCTGGGTGGCAGCATTGGCCATGGGTGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SHAWQHCQCGGA*SGWQHWPWVPQ
Trigger: CTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp TGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCATTaGCCATGGGTGCCCCAGCATGGGAAACAGCAATGG +
Preference number: 6 (lower is better)
Translates to: CQCGGAWSGWQH*PWVPQHGKQQW
Trigger: CCATTGCTGTTTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp ATCCCATGCTTGGCAGCATTGCCAATGTGGAGGGGCTaGGTCTGGGTGGCAGCATTGGCCATGGGTGCCCCA +
Preference number: 6 (lower is better)
Translates to: IPCLAALPMWRG*VWVAALAMGAP
Trigger: TGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp GCAGCTTCTATCCCATGCTTGGCAGCATTGCCAATGTGGAGGGGCTaGGTCTGGGTGGCAGCATTGGCCATGGGTGCCCCAGCATGGGAA +
Preference number: 6 (lower is better)
Translates to: AASIPCLAALPMWRG*VWVAALAMGAPAWE
Trigger: TTCCCATGCTGGGGCACCCATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp GCAGCTTCTATCCCATGCTTGGCAGCATTGCCAATGTaGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATG +
Preference number: 6 (lower is better)
Translates to: AASIPCLAALPM*RGLVWVAALAM
Trigger: CATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp AAAGCTGTGAGGACAGGAAGGACAGCCCCAGAAGGGTaGGTGGCAGGGTGCCACGTGTCATCAAAATCCATG +
Preference number: 6 (lower is better)
Translates to: KAVRTGRTAPEG*VAGCHVSSKSM
Trigger: CATGGATTTTGATGACACGTGGCACCCTGCCACCCACCCTTCTGGGGCTGTCCTTCCTGTCCTCACAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp GCCAAAAATGCAGCTTCTATCCCATGCTTGGCAGCATaGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AKNAASIPCLAA*PMWRGLVWVAA
Trigger: TGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp CCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTTGGCAGCATaGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCATTGGCCATG +
Preference number: 6 (lower is better)
Translates to: PNIAKNAASIPCLAA*PMWRGLVWVAALAM
Trigger: CATGGCCAATGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp CCTTGGAGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTaGGCAGCATTGCCAATGTGGAGGGGCTTGGTCTGGGTGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PWRPNIAKNAASIPC*AALPMWRGLVWVAA
Trigger: TGCTGCCACCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp CACCGTTCACAAAAGCAGCATATGTGGGCGGGAGCCTaGTGTCTGGCTGACCCCAAACAGTGCTGGATATGT +
Preference number: 6 (lower is better)
Translates to: HRSQKQHMWAGA*CLADPKQCWIC
Trigger: ACATATCCAGCACTGTTTGGGGTCAGCCAGACATCAGGCTCCCGCCCACATATGCTGCTTTTGTGAACGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp TCAAGCAGCATGGCACAGGCCACATACTGGAATGAATaGCGGGCTTCATGCTCCGAAACTGGAAAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: SSSMAQATYWNE*RASCSETGKGL
Trigger: CAGGCCCTTTCCAGTTTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCCTGTGCCATGCTGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp TCTCACCTGTGGCCTGTTGATCTGGCATTCATGGAATaGGGGGACAGTGATGCCACCATCAAGCAGCATGGC +
Preference number: 6 (lower is better)
Translates to: SHLWPVDLAFME*GDSDATIKQHG
Trigger: GCCATGCTGCTTGATGGTGGCATCACTGTCCCCTCATTCCATGAATGCCAGATCAACAGGCCACAGGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp CTGTGTCCCAGGACAGCATCTTGGAGGCATTGGCTCTaGACTTTTCCTCTAGGTCCTCCTGGCTCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: LCPRTASWRHWL*TFPLGPPGSVV
Trigger: AACCACTGAGCCAGGAGGACCTAGAGGAAAAGTTCAGAGCCAATGCCTCCAAGATGCTGTCCTGGGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp CCACGGAAGGGGGATGGAATCTCTTTGGCATGTCATTaGCCTCCTTGGCGAAATGCAGTAATCGGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: PRKGDGISLACH*PPWRNAVIGLA
Trigger: TGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCCCTTCCGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp ACCACGGAAGGGGGATGGAATCTCTTTGGCATGTCATaGGCCTCCTTGGCGAAATGCAGTAATCGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: TTEGGWNLFGMS*ASLAKCSNRPC
Trigger: GCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCCCTTCCGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp ATGGCCAGAGCTTCTCGGCACTTTGTCGAGCTAAGTCCTAAAAACTaGGATGCAGCAGCAGCACTACCCAACGTTCCTACCACGGAAGGG +
Preference number: 6 (lower is better)
Translates to: MARASRHFVELSPKN*DAAAALPNVPTTEG
Trigger: CCCTTCCGTGGTAGGAACGTTGGGTAGTGCTGCTGCTGCATCCAAGTTTTTAGGACTTAGCTCGACAAAGTGCCGAGAAGCTCTGGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp ACCATCAAGCAGCATGGCACAGGCCACATACTGGAATaGATGACGGGCTTCATGCTCCGAAACTGGAAAGGG +
Preference number: 6 (lower is better)
Translates to: TIKQHGTGHILE*MTGFMLRNWKG
Trigger: CCCTTTCCAGTTTCGGAGCATGAAGCCCGTCATTCATTCCAGTATGTGGCCTGTGCCATGCTGCTTGATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp CACAAAAGCAGCATATGTGGGCGGGAGCCTGATGTCTaGCTGACCCCAAACAGTGCTGGATATGTTGGAACT +
Preference number: 6 (lower is better)
Translates to: HKSSICGREPDV*LTPNSAGYVGT
Trigger: AGTTCCAACATATCCAGCACTGTTTGGGGTCAGCCAGACATCAGGCTCCCGCCCACATATGCTGCTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp CCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTTaGCAGCATTGCCAATGTGGAGGGGCTTGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: PTLPKMQLLSHA*QHCQCGGAWSG
Trigger: CCCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp CCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTaGGCAGCATTGCCAATGTGGAGGGGCTTGGTCTGG +
Preference number: 6 (lower is better)
Translates to: PNIAKNAASIPC*AALPMWRGLVW
Trigger: CCAGACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp AGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATaGTTGGCAGCATTGCCAATGTGGAGGGGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: RPNIAKNAASIP*LAALPMWRGLV
Trigger: GACCAAGCCCCTCCACATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp ACCACGGAAGGGGGATGGAATCTCTTTGGCATGTCATTGGCCTCCTaGGCGAAATGCAGTAATCGGCCTTGCACTTCAATACCAACATTG +
Preference number: 6 (lower is better)
Translates to: TTEGGWNLFGMSLAS*AKCSNRPCTSIPTL
Trigger: CAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCCCTTCCGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp CTGCCTCCAAGTCCAAGACCTGCTTGTTTCCTTGGAGACCCAACATaGCCAAAAATGCAGCTTCTATCCCATGCTTGGCAGCATTGCCAA +
Preference number: 6 (lower is better)
Translates to: LPPSPRPACFLGDPT*PKMQLLSHAWQHCQ
Trigger: TTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp GTGGCTCCATCCTTGAGGGTGACACTTATTTCACAGTACAGTATGTaGAAGCTTGGCAAGTTGTCCGGAGGGTACTCCAGCTCCACCTTA +
Preference number: 6 (lower is better)
Translates to: VAPSLRVTLISQYSM*KLGKLSGGYSSSTL
Trigger: TAAGGTGGAGCTGGAGTACCCTCCGGACAACTTGCCAAGCTTCAACATACTGTACTGTGAAATAAGTGTCACCCTCAAGGATGGAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp TCATTGGCCTCCTTGGCGAAATGCAGTAATCGGCCTTaGACTTCAATACCAACATTGAAAGCCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SLASLAKCSNRP*TSIPTLKASSR
Trigger: CCTGCTGCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp GTCCAAGACCTGCTTGTTTCCTTGGAGACCCAACATTaGCAAAAATGCAGCTTCTATCCCATGCTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: VQDLLVSLETQH*QKCSFYPMLGS
Trigger: GCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp TCTCTTAATGTAGTCAGTTGGAAGCAGGGCTCTCTCTaGTACAAGGTGCTTTCTCACAGATGCAGCTGCGTC +
Preference number: 6 (lower is better)
Translates to: SLNVVSWKQGSL*YKVLSHRCSCV
Trigger: GACGCAGCTGCATCTGTGAGAAAGCACCTTGTAGCAGAGAGAGCCCTGCTTCCAACTGACTACATTAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp GGGGATGGAATCTCTTTGGCATGTCATTGGCCTCCTTaGCGAAATGCAGTAATCGGCCTTGCACTTCAATAC +
Preference number: 6 (lower is better)
Translates to: GDGISLACHWPP*RNAVIGLALQY
Trigger: GTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp GGGGGATGGAATCTCTTTGGCATGTCATTGGCCTCCTaGGCGAAATGCAGTAATCGGCCTTGCACTTCAATA +
Preference number: 6 (lower is better)
Translates to: GGWNLFGMSLAS*AKCSNRPCTSI
Trigger: TATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATTCCATCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp AAGGCCCCAAATCCTGCCTCCAAGTCCAAGACCTGCTaGTTTCCTTGGAGACCCAACATTGCCAAAAATGCA +
Preference number: 6 (lower is better)
Translates to: KAPNPASKSKTC*FPWRPNIAKNA
Trigger: TGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAGGATTTGGGGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp AAAGGCCCCAAATCCTGCCTCCAAGTCCAAGACCTGCTTGTTTCCTaGGAGACCCAACATTGCCAAAAATGCAGCTTCTATCCCATGCTT +
Preference number: 6 (lower is better)
Translates to: KGPKSCLQVQDLLVS*ETQHCQKCSFYPML
Trigger: AAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAGGATTTGGGGCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp GCACCCAGAGTGTCTAGAATCATCCTCTTGCTCCTCTaGATAACACGATCTGTCAGGTGTCCCACTTTCAAG +
Preference number: 6 (lower is better)
Translates to: APRVSRIILLLL*ITRSVRCPTFK
Trigger: CTTGAAAGTGGGACACCTGACAGATCGTGTTATTCAGAGGAGCAAGAGGATGATTCTAGACACTCTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp TCCTTGAGGGTGACACTTATTTCACAGTACAGTATGTaGAAGCTTGGCAAGTTGTCCGGAGGGTACTCCAGC +
Preference number: 6 (lower is better)
Translates to: SLRVTLISQYSM*KLGKLSGGYSS
Trigger: GCTGGAGTACCCTCCGGACAACTTGCCAAGCTTCAACATACTGTACTGTGAAATAAGTGTCACCCTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp TTTATAAGGCTTTCCACTGTGTCCCAGGACAGCATCTaGGAGGCATTGGCTCTGAACTTTTCCTCTAGGTCC +
Preference number: 6 (lower is better)
Translates to: FIRLSTVSQDSI*EALALNFSSRS
Trigger: GGACCTAGAGGAAAAGTTCAGAGCCAATGCCTCCAAGATGCTGTCCTGGGACACAGTGGAAAGCCTTATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp TCCTTGGCGAAATGCAGTAATCGGCCTTGCACTTCAATACCAACATaGAAAGCCAGCAGCAGGTCAAGGCCAGAAAACTTTGGACTCCTT +
Preference number: 6 (lower is better)
Translates to: SLAKCSNRPCTSIPT*KASSRSRPENFGLL
Trigger: AAGGAGTCCAAAGTTTTCTGGCCTTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp CTGCTTGTTTCCTTGGAGACCCAACATTGCCAAAAATaGAGCTTCTATCCCATGCTTGGCAGCATTGCCAAT +
Preference number: 6 (lower is better)
Translates to: LLVSLETQHCQK*SFYPMLGSIAN
Trigger: ATTGGCAATGCTGCCAAGCATGGGATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp AATCCTGCCTCCAAGTCCAAGACCTGCTTGTTTCCTTaGAGACCCAACATTGCCAAAAATGCAGCTTCTATC +
Preference number: 6 (lower is better)
Translates to: NPASKSKTCLFP*RPNIAKNAASI
Trigger: GATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp GGAGAGTTTGAAGCTACCTCTGGTGGAGAGGGTCCTTaGAGAAGTGTAGTTAACACAGAACAGTCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: GEFEATSGGEGP*RSVVNTEQSSR
Trigger: CCTAGAAGACTGTTCTGTGTTAACTACACTTCTCAAAGGACCCTCTCCACCAGAGGTAGCTTCAAACTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS GCA 72 bp AATCTCTTTGGCATGTCATTGGCCTCCTTGGCGAAATaGAGTAATCGGCCTTGCACTTCAATACCAACATTG +
Preference number: 6 (lower is better)
Translates to: NLFGMSLASLAK*SNRPCTSIPTL
Trigger: CAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTTCGCCAAGGAGGCCAATGACATGCCAAAGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp ATAACACGATCTGTCAGGTGTCCCACTTTCAAGCCATaGATTGCTGTGGCAAAGCTTTCTGTGATAGACTTG +
Preference number: 6 (lower is better)
Translates to: ITRSVRCPTFKP*IAVAKLSVIDL
Trigger: CAAGTCTATCACAGAAAGCTTTGCCACAGCAATCCATGGCTTGAAAGTGGGACACCTGACAGATCGTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377462.6
CDS CCA 72 bp TGGTATCCTGAGCACAATTCTCTTAATGTAGTCAGTTaGAAGCAGGGCTCTCTCTGCTACAAGGTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: WYPEHNSLNVVS*KQGSLCYKVLS
Trigger: AGAAAGCACCTTGTAGCAGAGAGAGCCCTGCTTCCAACTGACTACATTAAGAGAATTGTGCTCAGGATACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp AAATCCTGCCTCCAAGTCCAAGACCTGCTTGTTTCCTaGGAGACCCAACATTGCCAAAAATGCAGCTTCTAT +
Preference number: 6 (lower is better)
Translates to: KSCLQVQDLLVS*ETQHCQKCSFY
Trigger: ATAGAAGCTGCATTTTTGGCAATGTTGGGTCTCCAAGGAAACAAGCAGGTCTTGGACTTGGAGGCAGGATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 72 bp AAGGTATCAGAGCGATCTGTGAAGGTGGCTCCATCCTaGAGGGTGACACTTATTTCACAGTACAGTATGTTG +
Preference number: 6 (lower is better)
Translates to: KVSERSVKVAPS*RVTLISQYSML
Trigger: CAACATACTGTACTGTGAAATAAGTGTCACCCTCAAGGATGGAGCCACCTTCACAGATCGCTCTGATACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CAA 90 bp TTACATGCTGGAGAGTTTGAAGCTACCTCTGGTGGAGAGGGTCCTTaGAGAAGTGTAGTTAACACAGAACAGTCTTCTAGGTCTTCTAGA +
Preference number: 6 (lower is better)
Translates to: LHAGEFEATSGGEGP*RSVVNTEQSSRSSR
Trigger: TCTAGAAGACCTAGAAGACTGTTCTGTGTTAACTACACTTCTCAAAGGACCCTCTCCACCAGAGGTAGCTTCAAACTCTCCAGCATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS CCA 72 bp ATAACACGATCTGTCAGGTGTCCCACTTTCAAGCCATaGATTGCTGTGGCAAAGCTTTCTGTGATAGACTTT +
Preference number: 6 (lower is better)
Translates to: ITRSVRCPTFKP*IAVAKLSVIDF
Trigger: AAAGTCTATCACAGAAAGCTTTGCCACAGCAATCCATGGCTTGAAAGTGGGACACCTGACAGATCGTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449753.2
CDS CAA 72 bp AAATGCAGTAATCGGCCTTGCACTTCAATACCAACATaGAAAGCCAGCAGCAGGTCAAGGCCAGAAAACTTT +
Preference number: 6 (lower is better)
Translates to: KCSNRPCTSIPT*KASSRSRPENF
Trigger: AAAGTTTTCTGGCCTTGACCTGCTGCTGGCTTTCAATGTTGGTATTGAAGTGCAAGGCCGATTACTGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2
CDS TCA 72 bp GAGATTTGTGATAGAATTATTACATGCTGGAGAGTTTaGAGCTACCTCTGGTGGAGAGGGTCCTTTGAGAAG +
Preference number: 6 (lower is better)
Translates to: EICDRIITCWRV*SYLWWRGSFEK
Trigger: CTTCTCAAAGGACCCTCTCCACCAGAGGTAGCTTCAAACTCTCCAGCATGTAATAATTCTATCACAAATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377462.6
ENST00000449753.2