Pregenerated sensors for ACMSD (Homo sapiens)
Ensembl gene IDs: ENSG00000153086Ensembl transcript IDs: ENST00000356140.10, ENST00000392928.5, ENST00000485893.5, ENST00000498093.1
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCTCCTGCGCGTTCAGGTCCCACTCGTTGACGTGGGTGCCAATTTaGACCCCGGGAAAGCCCAGCTCTTTCACACAGCGCTCCATCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSCAFRSHSLTWVPI*TPGKPSSFTQRSIS Trigger: GGAGATGGAGCGCTGTGTGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS TCA 90 bp | CCGCATAGACAGGAAAGAGCTCCTGCGCGTTCAGGTCCCACTCGTTaGCGTGGGTGCCAATTTGGACCCCGGGAAAGCCCAGCTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: PHRQERAPARSGPTR*RGCQFGPRESPALS Trigger: TGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCTCTTTCCTGTCTATGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 90 bp | ATGGGGTTGTCCTGGGCACACAGATCTGGGCGCATGCTGAATCCATaGGAGATTCTTCCCACTGTGAAGGGGAAGGCACCACCACCATGT | + |
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Preference number: 5 (lower is better) Translates to: MGLSWAHRSGRMLNP*EILPTVKGKAPPPC Trigger: ACATGGTGGTGGTGCCTTCCCCTTCACAGTGGGAAGAATCTCCCATGGATTCAGCATGCGCCCAGATCTGTGTGCCCAGGACAACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS GCA 90 bp | GTTGGAGCTGCACCCAGCCTCCGTAGCCAAACCTCTTTCACTGGCTaGCCTGTTTTCCCTGTCTCACTTCCTCACTCTACTGGTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: VGAAPSLRSQTSFTG*PVFPVSLPHSTGVS Trigger: GGAAACACCAGTAGAGTGAGGAAGTGAGACAGGGAAAACAGGGCAGCCAGTGAAAGAGGTTTGGCTACGGAGGCTGGGTGCAGCTCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS GCA 90 bp | CCTACAAGCCAAGGGAGCCAGTATTTGGCCATTCGTCCATCCATCTaGATGTCCCAGGGATGCACGAACAGGGAACACTTCAGCCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: PTSQGSQYLAIRPSI*MSQGCTNREHFSLS Trigger: CGAAAGGCTGAAGTGTTCCCTGTTCGTGCATCCCTGGGACATGCAGATGGATGGACGAATGGCCAAATACTGGCTCCCTTGGCTTGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 90 bp | AAGGTATTTCTTCGGGTTCATGGGGTTGTCCTGGGCACACAGATCTaGGCGCATGCTGAATCCATGGGAGATTCTTCCCACTGTGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: KVFLRVHGVVLGTQI*AHAESMGDSSHCEG Trigger: CCCTTCACAGTGGGAAGAATCTCCCATGGATTCAGCATGCGCCCAGATCTGTGTGCCCAGGACAACCCCATGAACCCGAAGAAATACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS TCA 90 bp | GTGTCATTTTGGGTGCATATAGGGATGTCGCTAAGGAAGAGGAGCTaGTCTGGGGGAATACCCAGCCATGTAGATGATCTGGGATTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VSFWVHIGMSLRKRS*SGGIPSHVDDLGFL Trigger: GAGAAATCCCAGATCATCTACATGGCTGGGTATTCCCCCAGATCAGCTCCTCTTCCTTAGCGACATCCCTATATGCACCCAAAATGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 90 bp | TGCCCTGTTTTCCCTGTCTCACTTCCTCACTCTACTGGTGTTTCCTaGGATCACCTCCAAAGCAAACTACTTGCATCTGAATCCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: CPVFPVSLPHSTGVS*DHLQSKLLASESLS Trigger: AGACAAGGATTCAGATGCAAGTAGTTTGCTTTGGAGGTGATCCCAGGAAACACCAGTAGAGTGAGGAAGTGAGACAGGGAAAACAGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS CCA 90 bp | TCCTCAGGTTTGGCCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGACTTTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: SSGLAFLVHFSNTNF*IPAILSHHSEDFPI Trigger: GATGGGAAAGTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGCCAAACCTGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS TCA 90 bp | CGAAACACACTTTCAGTTTGGGAAACTTCTCAAATACTCCACCCATaGTCATGGAGCAAATGGCTATGGTGGTCTCTGCTGGCATTCCTA | + |
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Preference number: 5 (lower is better) Translates to: RNTLSVWETSQILHP*SWSKWLWWSLLAFL Trigger: TAGGAATGCCAGCAGAGACCACCATAGCCATTTGCTCCATGATCATGGGTGGAGTATTTGAGAAGTTTCCCAAACTGAAAGTGTGTTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 90 bp | TTGCACTGTTACTCCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGACTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHCYSFLVHFSNTNF*IPAILSHHSEDFPI Trigger: GATGGGAAAGTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGAGTAACAGTGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356140.10 ENST00000485893.5 |
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| CDS CCA 90 bp | ACTTCTCATCGTACCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGACTTTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: TSHRTFLVHFSNTNF*IPAILSHHSEDFPI Trigger: GATGGGAAAGTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACGATGAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS GCA 90 bp | GTCAATTTGACTTTGAAACTTGTGCCCCTTTCCTGCTTACTACATTaGCATGTGTCATTTTGGGTGCATATAGGGATGTCGCTAAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VNLTLKLVPLSCLLH*HVSFWVHIGMSLRK Trigger: CTTCCTTAGCGACATCCCTATATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGGCACAAGTTTCAAAGTCAAATTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 90 bp | TTACATCAGATGCTAACATTGGTAGCACTTCTCATCGTACCTTTTTaGTCCATTTCTCTAATACGAACTTCTGGATCCCAGCAATTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LHQMLTLVALLIVPF*SISLIRTSGSQQFS Trigger: AGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACGATGAGAAGTGCTACCAATGTTAGCATCTGATGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS TCA 90 bp | TTCTTGTGCGCTTTAAAGTACCACTATGCTGGTGTTTTAATTAAATaGGAGAATCAAAAGCCATATTATTCCAGGAAGAAATCTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FLCALKYHYAGVLIK*ENQKPYYSRKKSQG Trigger: GCCCTGAGATTTCTTCCTGGAATAATATGGCTTTTGATTCTCTCATTTAATTAAAACACCAGCATAGTGGTACTTTAAAGCGCACAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS GCA 72 bp | CAGCGCTCCATCTCCTTGACCGCCAGCTCAGGGGCCTaGATGGGCAACGTCCCCAGACCCACGAACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QRSISLTASSGA*MGNVPRPTNLL Trigger: CAGGAGGTTCGTGGGTCTGGGGACGTTGCCCATGCAGGCCCCTGAGCTGGCGGTCAAGGAGATGGAGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | CCTGCATGGGCAACGTCCCCAGACCCACGAACCTCCTaGGGTAGCTCACAACGGTGCTGGCAAGGTCGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PAWATSPDPRTS*GSSQRCWQGRC Trigger: ACAACGACCTTGCCAGCACCGTTGTGAGCTACCCCAGGAGGTTCGTGGGTCTGGGGACGTTGCCCATGCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CAA 90 bp | GAGCTCCTGCGCGTTCAGGTCCCACTCGTTGACGTGGGTGCCAATTaGGACCCCGGGAAAGCCCAGCTCTTTCACACAGCGCTCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: ELLRVQVPLVDVGAN*DPGKAQLFHTALHL Trigger: GAGATGGAGCGCTGTGTGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS TCA 72 bp | CAGGAAAGAGCTCCTGCGCGTTCAGGTCCCACTCGTTaGCGTGGGTGCCAATTTGGACCCCGGGAAAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QERAPARSGPTR*RGCQFGPRESP Trigger: TGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCTCTTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | GCGTTCAGGTCCCACTCGTTGACGTGGGTGCCAATTTaGACCCCGGGAAAGCCCAGCTCTTTCACACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: AFRSHSLTWVPI*TPGKPSSFTQR Trigger: GCGCTGTGTGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | AAGAGCTCCTGCGCGTTCAGGTCCCACTCGTTGACGTaGGTGCCAATTTGGACCCCGGGAAAGCCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: KSSCAFRSHSLT*VPIWTPGKPSS Trigger: AGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CAA 72 bp | CGCGTTCAGGTCCCACTCGTTGACGTGGGTGCCAATTaGGACCCCGGGAAAGCCCAGCTCTTTCACACAGCG | + |
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Preference number: 6 (lower is better) Translates to: RVQVPLVDVGAN*DPGKAQLFHTA Trigger: CGCTGTGTGAAAGAGCTGGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CAA 72 bp | ACAGGAAAGAGCTCCTGCGCGTTCAGGTCCCACTCGTaGACGTGGGTGCCAATTTGGACCCCGGGAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TGKSSCAFRSHS*TWVPIWTPGKP Trigger: GGGCTTTCCCGGGGTCCAAATTGGCACCCACGTCAACGAGTGGGACCTGAACGCGCAGGAGCTCTTTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS GCA 72 bp | CCAGACCCACGAACCTCCTGGGGTAGCTCACAACGGTaGTGGCAAGGTCGTTGTTTAAAAGCTGGCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: PDPRTSWGSSQR*WQGRCLKAGTG Trigger: ACCTGTGCCAGCTTTTAAACAACGACCTTGCCAGCACCGTTGTGAGCTACCCCAGGAGGTTCGTGGGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS GCA 72 bp | TTGGCCATTCGTCCATCCATCTGCATGTCCCAGGGATaGACGAACAGGGAACACTTCAGCCTTTCGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LAIRPSICMSQG*TNREHFSLSAA Trigger: GGCAGCCGAAAGGCTGAAGTGTTCCCTGTTCGTGCATCCCTGGGACATGCAGATGGATGGACGAATGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | TCCTGGGCACACAGATCTGGGCGCATGCTGAATCCATaGGAGATTCTTCCCACTGTGAAGGGGAAGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: SWAHRSGRMLNP*EILPTVKGKAP Trigger: TGGTGCCTTCCCCTTCACAGTGGGAAGAATCTCCCATGGATTCAGCATGCGCCCAGATCTGTGTGCCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | CTTCGGGTTCATGGGGTTGTCCTGGGCACACAGATCTaGGCGCATGCTGAATCCATGGGAGATTCTTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LRVHGVVLGTQI*AHAESMGDSSH Trigger: GTGGGAAGAATCTCCCATGGATTCAGCATGCGCCCAGATCTGTGTGCCCAGGACAACCCCATGAACCCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | GACCCACGAACCTCCTGGGGTAGCTCACAACGGTGCTaGCAAGGTCGTTGTTTAAAAGCTGGCACAGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: DPRTSWGSSQRC*QGRCLKAGTGL Trigger: TAAACCTGTGCCAGCTTTTAAACAACGACCTTGCCAGCACCGTTGTGAGCTACCCCAGGAGGTTCGTGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | CTGCTGGCATTCCTACAAGCCAAGGGAGCCAGTATTTaGCCATTCGTCCATCCATCTGCATGTCCCAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLAFLQAKGASI*PFVHPSACPRD Trigger: ATCCCTGGGACATGCAGATGGATGGACGAATGGCCAAATACTGGCTCCCTTGGCTTGTAGGAATGCCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | GAACCAAGGTATTTCTTCGGGTTCATGGGGTTGTCCTaGGCACACAGATCTGGGCGCATGCTGAATCCATGG | + |
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Preference number: 6 (lower is better) Translates to: EPRYFFGFMGLS*AHRSGRMLNPW Trigger: CCATGGATTCAGCATGCGCCCAGATCTGTGTGCCCAGGACAACCCCATGAACCCGAAGAAATACCTTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CAA 72 bp | TCTGCTGGCATTCCTACAAGCCAAGGGAGCCAGTATTaGGCCATTCGTCCATCCATCTGCATGTCCCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SAGIPTSQGSQY*AIRPSICMSQG Trigger: TCCCTGGGACATGCAGATGGATGGACGAATGGCCAAATACTGGCTCCCTTGGCTTGTAGGAATGCCAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CCA 72 bp | CTGTGTAAAAGGAACCAAGGTATTTCTTCGGGTTCATaGGGTTGTCCTGGGCACACAGATCTGGGCGCATGC | + |
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Preference number: 6 (lower is better) Translates to: LCKRNQGISSGS*GCPGHTDLGAC Trigger: GCATGCGCCCAGATCTGTGTGCCCAGGACAACCCCATGAACCCGAAGAAATACCTTGGTTCCTTTTACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS TCA 72 bp | TGGGTGCATATAGGGATGTCGCTAAGGAAGAGGAGCTaGTCTGGGGGAATACCCAGCCATGTAGATGATCTG | + |
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Preference number: 6 (lower is better) Translates to: WVHIGMSLRKRS*SGGIPSHVDDL Trigger: CAGATCATCTACATGGCTGGGTATTCCCCCAGATCAGCTCCTCTTCCTTAGCGACATCCCTATATGCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 72 bp | CTGCCCTGTTTTCCCTGTCTCACTTCCTCACTCTACTaGTGTTTCCTGGGATCACCTCCAAAGCAAACTACT | + |
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Preference number: 6 (lower is better) Translates to: LPCFPCLTSSLY*CFLGSPPKQTT Trigger: AGTAGTTTGCTTTGGAGGTGATCCCAGGAAACACCAGTAGAGTGAGGAAGTGAGACAGGGAAAACAGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS CCA 72 bp | CCCCTTTCCTGCTTACTACATTGCCATGTGTCATTTTaGGTGCATATAGGGATGTCGCTAAGGAAGAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLSCLLHCHVSF*VHIGMSLRKRS Trigger: GCTCCTCTTCCTTAGCGACATCCCTATATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CAA 72 bp | GCCCCTTTCCTGCTTACTACATTGCCATGTGTCATTTaGGGTGCATATAGGGATGTCGCTAAGGAAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: APFLLTTLPCVI*GAYRDVAKEEE Trigger: CTCCTCTTCCTTAGCGACATCCCTATATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CAA 90 bp | GTGAAGGGGAAGGCACCACCACCATGTGCGAAACACACTTTCAGTTaGGGAAACTTCTCAAATACTCCACCCATGATCATGGAGCAAATG | + |
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Preference number: 6 (lower is better) Translates to: VKGKAPPPCAKHTFS*GNFSNTPPMIMEQM Trigger: CATTTGCTCCATGATCATGGGTGGAGTATTTGAGAAGTTTCCCAAACTGAAAGTGTGTTTCGCACATGGTGGTGGTGCCTTCCCCTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 |
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| CDS CAA 90 bp | GAAACTTGTGCCCCTTTCCTGCTTACTACATTGCCATGTGTCATTTaGGGTGCATATAGGGATGTCGCTAAGGAAGAGGAGCTGATCTGG | + |
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Preference number: 6 (lower is better) Translates to: ETCAPFLLTTLPCVI*GAYRDVAKEEELIW Trigger: CCAGATCAGCTCCTCTTCCTTAGCGACATCCCTATATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGGCACAAGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 72 bp | TTCCCTGTCTCACTTCCTCACTCTACTGGTGTTTCCTaGGATCACCTCCAAAGCAAACTACTTGCATCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FPVSLPHSTGVS*DHLQSKLLASE Trigger: TTCAGATGCAAGTAGTTTGCTTTGGAGGTGATCCCAGGAAACACCAGTAGAGTGAGGAAGTGAGACAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS TCA 72 bp | GAACTTCTGGATCCCAGCAATTCTCTCGCACCACTCTaGAGACTTTCCCATCTTTCAACAACTTTGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ELLDPSNSLAPL*RLSHLSTTLLL Trigger: GAGAAGCAAAGTTGTTGAAAGATGGGAAAGTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000356140.10 ENST00000392928.5 ENST00000485893.5 ENST00000498093.1 |
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| CDS CCA 72 bp | TTGGCCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LAFLVHFSNTNF*IPAILSHHSED Trigger: GTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000392928.5 |
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| CDS CCA 72 bp | CGTACCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RTFLVHFSNTNF*IPAILSHHSED Trigger: GTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS TCA 72 bp | GAGGAGCTGATCTGGGGGAATACCCAGCCATGTAGATaGTCTGGGATTTCTCTGGCATATATAATAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EELIWGNTQPCR*SGISLAYIIVS Trigger: AGAAACTATTATATATGCCAGAGAAATCCCAGATCATCTACATGGCTGGGTATTCCCCCAGATCAGCTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 72 bp | TACTCCTTTTTGGTCCATTTCTCTAATACGAACTTCTaGATCCCAGCAATTCTCTCGCACCACTCTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: YSFLVHFSNTNF*IPAILSHHSED Trigger: GTCTTCAGAGTGGTGCGAGAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000356140.10 ENST00000485893.5 |
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| CDS CAA 90 bp | GGTCAATTTGACTTTGAAACTTGTGCCCCTTTCCTGCTTACTACATaGCCATGTGTCATTTTGGGTGCATATAGGGATGTCGCTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GQFDFETCAPFLLTT*PCVILGAYRDVAKE Trigger: TTCCTTAGCGACATCCCTATATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGGCACAAGTTTCAAAGTCAAATTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS GCA 72 bp | CAGGTCAATTTGACTTTGAAACTTGTGCCCCTTTCCTaGTTACTACATTGCCATGTGTCATTTTGGGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: QVNLTLKLVPLS*LLHCHVSFWVH Trigger: ATGCACCCAAAATGACACATGGCAATGTAGTAAGCAGGAAAGGGGCACAAGTTTCAAAGTCAAATTGACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CAA 72 bp | GTGAAAGGTAGAGCCAGGATTTTAACCCAGGTCAATTaGACTTTGAAACTTGTGCCCCTTTCCTGCTTACTA | + |
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Preference number: 6 (lower is better) Translates to: VKGRARILTQVN*TLKLVPLSCLL Trigger: TAGTAAGCAGGAAAGGGGCACAAGTTTCAAAGTCAAATTGACCTGGGTTAAAATCCTGGCTCTACCTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CCA 72 bp | ATGCTAACATTGGTAGCACTTCTCATCGTACCTTTTTaGTCCATTTCTCTAATACGAACTTCTGGATCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MLTLVALLIVPF*SISLIRTSGSQ Trigger: CTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACGATGAGAAGTGCTACCAATGTTAGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS CAA 72 bp | TTGGCGAGGAGACTACATCAGAGGAAAGACTTTTTCTaGTGCGCTTTAAAGTACCACTATGCTGGTGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LARRLHQRKDFF*CALKYHYAGVL Trigger: TAAAACACCAGCATAGTGGTACTTTAAAGCGCACAAGAAAAAGTCTTTCCTCTGATGTAGTCTCCTCGCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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| CDS CAA 72 bp | GATGCTAACATTGGTAGCACTTCTCATCGTACCTTTTaGGTCCATTTCTCTAATACGAACTTCTGGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: DANIGSTSHRTF*VHFSNTNFWIP Trigger: TGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACGATGAGAAGTGCTACCAATGTTAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS CAA 90 bp | TTTACATCAGATGCTAACATTGGTAGCACTTCTCATCGTACCTTTTaGGTCCATTTCTCTAATACGAACTTCTGGATCCCAGCAATTCTC | + |
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Preference number: 6 (lower is better) Translates to: FTSDANIGSTSHRTF*VHFSNTNFWIPAIL Trigger: GAGAATTGCTGGGATCCAGAAGTTCGTATTAGAGAAATGGACCAAAAAGGTACGATGAGAAGTGCTACCAATGTTAGCATCTGATGTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498093.1 |
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| CDS TCA 72 bp | ACACTTTCAATGTTCCAGTTTTCTCCATGTAGTGGATaGGGACAGTTGTATTCACAATTTACCCAACTAGTG | + |
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Preference number: 6 (lower is better) Translates to: TLSMFQFSPCSG*GQLYSQFTQLV Trigger: CACTAGTTGGGTAAATTGTGAATACAACTGTCCTCATCCACTACATGGAGAAAACTGGAACATTGAAAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000485893.5 |
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