RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACLY (Homo sapiens)

Ensembl gene IDs: ENSG00000131473

Ensembl transcript IDs: ENST00000352035.7, ENST00000353196.5, ENST00000393896.6, ENST00000537919.5, ENST00000588547.1, ENST00000588779.1, ENST00000590151.5, ENST00000590735.1, ENST00000590770.5, ENST00000592970.1

Found 1004 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTaGTCTGCAACACAGAACATTTCAGTGGGATACCAAACAAGCCCT +
Preference number: 1 (lower is better)
Translates to: WLRMQWPHPPDINRL*SATQNISVGYQTSP
Trigger: AGGGCTTGTTTGGTATCCCACTGAAATGTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR CCA 90 bp CTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTG +
Preference number: 1 (lower is better)
Translates to: LNKAGSTASCLYTFS*GKRSCLQFTAVGFL
Trigger: CAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: MQWPHPPDINRLWSATQNDVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAAGGAAGACCCCATCCTaGCAGTACTTAGATGCTTCC +
Preference number: 2 (lower is better)
Translates to: WLRMQWPHPPDINRLWSARKTPS*QYLDAS
Trigger: GGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCT...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 2 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIDVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: MQWPHPPDINRLWSATQNLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR-3UTR CCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGTGCCTGTACCCCAGTaGCTGTTTACATTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: EEDPILTVLRCFHIINTAVPVPQ*LFTFQA
Trigger: GGCCTGGAATGTAAACAGCCACTGGGGTACAGGCAC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: TPYNEEDPILTVLRCFHILSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR GCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCATTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: EEDPILTVLRCFHIINTALSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAACTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 2 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 3 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRLGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 3 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCT +
Preference number: 3 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKSVHFF*GEEILS
Trigger: AGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR CCA 72 bp GCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTA +
Preference number: 3 (lower is better)
Translates to: AGSTASCLYTFS*GKRSCLQFTAV
Trigger: TACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
3UTR CCA 72 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTaGTCTGCAACACAGAACATTTCAGTGGGATACCAA +
Preference number: 3 (lower is better)
Translates to: MQWPHPPDINRL*SATQNISVGYQ
Trigger: TTGGTATCCCACTGAAATGTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCTTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 3 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFLGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPVGRCG*LVGDGP
Trigger: CGGCCCATCCCCAACCAGCCACCCACAGCGGCCCAC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTGCACGGCCCGGGTCTaGATGCCCCACACAATGGCC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPCTARV*MPHTMA
Trigger: GGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAGGTCTGCTGCTCGCTaGGGGCGCCTGAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPRSAAR*GRLSTP
Trigger: GGGAGTACTCAGGCGCCCCCAGCGAGCAGCAGACCT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTGTGGGTGGCTGGTTaGGGATGGGCCGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLWVAG*GWAGGP
Trigger: TGGGCCACCGGCCCATCCCCAACCAGCCACCCACAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTGTCCTGCTGGGGGCTaGCGTCGATGTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPCPAGG*RRCAPA
Trigger: AGCGGGAGCACATCGACGCCAGCCCCCAGCAGGACA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQDHGSH*GLVSGA
Trigger: TGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTCTGCCGAAGTCCGTaGGCGGCGCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPLCRSP*AALLPQ
Trigger: CTGTGGAAGAAGCGCCGCGCACGGACTTCGGCAGAG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTGCACGGCCCGGGTCTaGATGCCCCACACAATGGCC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRCTARV*MPHTMA
Trigger: GGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTGCTCTACCTGTCTCTaGCGAAGTCCGTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPCSTCL*RSPCAA
Trigger: CGCCGCGCACGGACTTCGGCAGAGACAGGTAGAGCA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGGTCTGCTGCTCGCTaGGGGCGCCTGAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRSAAR*GRLSTP
Trigger: GGGAGTACTCAGGCGCCCCCAGCGAGCAGCAGACCT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILVAGWG*AGGPGP
Trigger: TGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNVAGWG*AGGPGP
Trigger: TGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACCCAGGAGTAGTCCATaGGCACGGTTGGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKPRSSP*ARLGAA
Trigger: TGCCGCCCCCAACCGTGCCCATGGACTACTCCTGGG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCCCAGGAGTAGTCCATaGGCACGGTTGGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQPRSSP*ARLGAA
Trigger: TGCCGCCCCCAACCGTGCCCATGGACTACTCCTGGG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCTCGCTGGGGGCGCCTaGGTACTCCCCATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQLAGGA*VLPIVC
Trigger: GCAAACTATGGGGAGTACTCAGGCGCCCCCAGCGAG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTDHGSH*GLVSGA
Trigger: TGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCTCTGCCGAAGTCCGTaGGCGGCGCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQLCRSP*AALLPQ
Trigger: CTGTGGAAGAAGCGCCGCGCACGGACTTCGGCAGAG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTCTGCCGAAGTCCGTaGGCGGCGCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLCRSP*AALLPQ
Trigger: CTGTGGAAGAAGCGCCGCGCACGGACTTCGGCAGAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPRLGLL*RRHLIG
Trigger: GCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGCAGCTTCTGGGCCTTaGCGTCCACATCACCCACGT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPAASGP*RPHHPR
Trigger: ACGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKHPRPP*SRSSLW
Trigger: CCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQHPRPP*SRSSLW
Trigger: CCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWVAGWG*AGGPGP
Trigger: TGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACTGTGGGTGGCTGGTTaGGGATGGGCCGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKLWVAG*GWAGGP
Trigger: TGGGCCACCGGCCCATCCCCAACCAGCCACCCACAG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWAAVGG*LGMGRW
Trigger: CCACCGGCCCATCCCCAACCAGCCACCCACAGCGGC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCATAGGCCACGCTGCCTaGGCGGTACAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPIGHAA*AVQFGG
Trigger: GCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTAT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGGGGGCGGCACCTCCTaGGCAGGTACAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKGGGTS*AGTMTP
Trigger: TGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAGSRDG*PVISCH
Trigger: GTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCTCTCACGATGCCCTTaGACGTGGCAGCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTALSRCP*TWQPRW
Trigger: CCAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRPWCGG*RGWCSF
Trigger: GAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQPWCGG*RGWCSF
Trigger: GAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCAGTGGCAGGTCCGATaGTGGTCACTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPQWQVR*WSLPSG
Trigger: ACCAGAAGGGAGTGACCATCATCGGACCTGCCACTG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPQLAHK*WCCGLQ
Trigger: CTGGAGCCCACAACACCATCATTTGTGCGCGAGCTG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGAAGCCTGTGGCCTTaGCAACTGTGGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGSLWP*QLWLPV
Trigger: GACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGGTGGCCCAGGGCCATaGCCACAATGGCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTGGPGP*PQWPSC
Trigger: ACATGACGGCCATTGTGGGCATGGCCCTGGGCCACC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRLGLL*RRHLIG
Trigger: GCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKRLGLL*RRHLIG
Trigger: GCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCGGCCCGGGTCTGCATaGCCCACACAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFRPGSA*PTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATGCACGGCCCGGGTCTaGATGCCCCACACAATGGCC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKCTARV*MPHTMA
Trigger: GGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGAAGTCCAGCATGCCTTaGACGGCCCGGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQKSSMP*TARVCM
Trigger: CATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAAGTCCAGCATGCCTTaGACGGCCCGGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKKSSMP*TARVCM
Trigger: CATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATGGCACACGTCCCGATaGACCAGCAGACGATGGGCT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKWHTSR*TSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTGGCACACGTCCCGATaGACCAGCAGACGATGGGCT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRWHTSR*TSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTGGCCTTGCCAACTGTaGCTTCCTGTCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRWPCQL*LPVPAV
Trigger: CACGGCTGGGACAGGAAGCCACAGTTGGCAAGGCCA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATGGCCTTGCCAACTGTaGCTTCCTGTCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKWPCQL*LPVPAV
Trigger: CACGGCTGGGACAGGAAGCCACAGTTGGCAAGGCCA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGCAGCTTCTGGGCCTTaGCGTCCACATCACCCACGT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRAASGP*RPHHPR
Trigger: ACGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGCAGCTTCTGGGCCTTaGCGTCCACATCACCCACGT +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAAASGP*RPHHPR
Trigger: ACGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCAGTGGCGTCCACCTTaGCCGCCAAGTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPQWRPP*PPSQGH
Trigger: ATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRCSRQ*RPPWPP
Trigger: TGGCGGCCAAGGTGGACGCCACTGCCGACTACATCT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAGGTCTGCTGCTCGCTaGGGGCGCCTGAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNRSAAR*GRLSTP
Trigger: GGGAGTACTCAGGCGCCCCCAGCGAGCAGCAGACCT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSVAGWG*AGGPGP
Trigger: TGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCTGTGGGTGGCTGGTTaGGGATGGGCCGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWLWVAG*GWAGGP
Trigger: TGGGCCACCGGCCCATCCCCAACCAGCCACCCACAG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLAAVGG*LGMGRW
Trigger: CCACCGGCCCATCCCCAACCAGCCACCCACAGCGGC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRAAVGG*LGMGRW
Trigger: CCACCGGCCCATCCCCAACCAGCCACCCACAGCGGC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCAAVGG*LGMGRW
Trigger: CCACCGGCCCATCCCCAACCAGCCACCCACAGCGGC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSVGRCG*LVGDGP
Trigger: CGGCCCATCCCCAACCAGCCACCCACAGCGGCCCAC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCAGTGTGGGCCGCTGTaGGTGGCTGGTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFQCGPL*VAGWGW
Trigger: CCATCCCCAACCAGCCACCCACAGCGGCCCACACTG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATGTCCTGCTGGGGGCTaGCGTCGATGTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKCPAGG*RRCAPA
Trigger: AGCGGGAGCACATCGACGCCAGCCCCCAGCAGGACA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAAGATGCTGTCCTGCTaGGGGCTGGCGTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKKMLSC*GLASMC
Trigger: GCACATCGACGCCAGCCCCCAGCAGGACAGCATCTT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGTGGCATGGCAGGCTTaGCCTTCTTTGCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKVAWQA*PSLQAP
Trigger: TGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCAC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGACCTGTCCCCACCAATaGCCACGCCCTCATAGACGC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQTCPHQ*PRPHRR
Trigger: GCGTCTATGAGGGCGTGGCCATTGGTGGGGACAGGT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAACCTGTCCCCACCAATaGCCACGCCCTCATAGACGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKTCPHQ*PRPHRR
Trigger: GCGTCTATGAGGGCGTGGCCATTGGTGGGGACAGGT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAGSRDG*PVISCH
Trigger: GTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCC...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACTCGCTGGGGGCGCCTaGGTACTCCCCATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATLAGGA*VLPIVC
Trigger: GCAAACTATGGGGAGTACTCAGGCGCCCCCAGCGAG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKCSRWR*GGSLQC
Trigger: ACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWDHGSH*GLVSGA
Trigger: TGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGATGCCTTCAGCTATaGTGGCGATGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGCLQL*WRWSGS
Trigger: AGATCCGGACCATCGCCATCATAGCTGAAGGCATCC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCAGTGGCAGGTCCGATaGTGGTCACTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRQWQVR*WSLPSG
Trigger: ACCAGAAGGGAGTGACCATCATCGGACCTGCCACTG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCAGTGGCAGGTCCGATaGTGGTCACTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQQWQVR*WSLPSG
Trigger: ACCAGAAGGGAGTGACCATCATCGGACCTGCCACTG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCGCAGATGCTGGTCATaGACGAGGCAGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRRCWS*TRQVCG
Trigger: TCCGCAAACCTGCCTCGTTCATGACCAGCATCTGCG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKQLAHK*WCCGLQ
Trigger: CTGGAGCCCACAACACCATCATTTGTGCGCGAGCTG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGGCTGCAGAGAGACCTaGTCTACCTCTGCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAGCRET*STSAEV
Trigger: GACTTCGGCAGAGGTAGAGCAGGTCTCTCTGCAGCC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTTGGCCGACATGGCTaGAGAGAGACCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLGRHG*RETCST
Trigger: GGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCTTGGCCGACATGGCTaGAGAGAGACCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTALGRHG*RETCST
Trigger: GGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGGTGGCCCAGGGCCATaGCCACAATGGCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILGGPGP*PQWPSC
Trigger: ACATGACGGCCATTGTGGGCATGGCCCTGGGCCACC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGGTGGCCCAGGGCCATaGCCACAATGGCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKGGPGP*PQWPSC
Trigger: ACATGACGGCCATTGTGGGCATGGCCCTGGGCCACC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGLRKR*CPAGGW
Trigger: CCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGTGCACGGCCCGGGTCTaGATGCCCCACACAATGGCC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWCTARV*MPHTMA
Trigger: GGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCA...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRSQSPA*LARPGS
Trigger: AGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTGCTCTACCTGTCTCTaGCGAAGTCCGTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFCSTCL*RSPCAA
Trigger: CGCCGCGCACGGACTTCGGCAGAGACAGGTAGAGCA...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQFLSQP*LQPGLD
Trigger: GTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTRCSRQ*RPPWPP
Trigger: TGGCGGCCAAGGTGGACGCCACTGCCGACTACATCT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAGPCPQ*PSCESL
Trigger: CAGAGACTCACATGACGGCCATTGTGGGCATGGCCC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRGPCPQ*PSCESL
Trigger: CAGAGACTCACATGACGGCCATTGTGGGCATGGCCC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCTGTGGGTGGCTGGTTaGGGATGGGCCGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFLWVAG*GWAGGP
Trigger: TGGGCCACCGGCCCATCCCCAACCAGCCACCCACAG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCTGTGGGTGGCTGGTTaGGGATGGGCCGGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLLWVAG*GWAGGP
Trigger: TGGGCCACCGGCCCATCCCCAACCAGCCACCCACAG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTAAGATGCTGTCCTGCTaGGGGCTGGCGTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTKMLSC*GLASMC
Trigger: GCACATCGACGCCAGCCCCCAGCAGGACAGCATCTT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGTGGCATGGCAGGCTTaGCCTTCTTTGCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTVAWQA*PSLQAP
Trigger: TGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCAC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRTMALV*RLKRVV
Trigger: CACCACCCTCTTCAGCCGCCACACCAAGGCCATTGT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACAGAGGAGAACATGGTaGCACACGTCCCGATGCACC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKQRRTW*HTSRCT
Trigger: GGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCTCAGAGGAGAACATaGTGGCACACGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRPQRRT*WHTSRC
Trigger: GCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACCTCAGAGGAGAACATaGTGGCACACGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKPQRRT*WHTSRC
Trigger: GCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCCTCAGAGGAGAACATaGTGGCACACGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQPQRRT*WHTSRC
Trigger: GCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGGGGGCGGCACCTCCTaGGCAGGTACAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKGGGTS*AGTMTP
Trigger: TGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCCCAGGAGTAGTCCATaGGCACGGTTGGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWPRSSP*ARLGAA
Trigger: TGCCGCCCCCAACCGTGCCCATGGACTACTCCTGGG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFGSRDG*PVISCH
Trigger: GTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPFARLL*NCLGRH
Trigger: ATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACTACCAAGTTCTGGCTaGGCAGCCAGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKLPSSG*AARGGP
Trigger: AGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTGGCAGCCACGTTGGTaGAGTTTGCGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTWQPRW*SLRCCL
Trigger: GAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCTCTCACGATGCCCTTaGACGTGGCAGCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNLSRCP*TWQPRW
Trigger: CCAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCATGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSACSRWR*GGSLQC
Trigger: ACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCA...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILPWCGG*RGWCSF
Trigger: GAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKPWCGG*RGWCSF
Trigger: GAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGGATGCCTTCAGCTATaGTGGCGATGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKGCLQL*WRWSGS
Trigger: AGATCCGGACCATCGCCATCATAGCTGAAGGCATCC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGATGCCTTCAGCTATaGTGGCGATGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQGCLQL*WRWSGS
Trigger: AGATCCGGACCATCGCCATCATAGCTGAAGGCATCC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCATGCCTCCGGAACGTaGGACATAGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWHASGT*DIGHAA
Trigger: GGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACCTGGGCAGGTACAATaGCTCCATTGGCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKPGQVQ*LHWPRD
Trigger: ATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGDQCP*SASLPS
Trigger: AGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCATCGACTTCACTCGGTaGCCAATGCCCATGATCAGC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPIDFTR*PMPMIS
Trigger: GCTGATCATGGGCATTGGTCACCGAGTGAAGTCGAT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGACCTGCTCTACCTCTaGCGAAGTCCGTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFDLLYL*RSPCAA
Trigger: CGCCGCGCACGGACTTCGGCAGAGGTAGAGCAGGTC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGGCTGCAGAGAGACCTaGTCTACCTCTGCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTGCRET*STSAEV
Trigger: GACTTCGGCAGAGGTAGAGCAGGTCTCTCTGCAGCC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLSQGWS*SKRAQS
Trigger: AGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSQGWS*SKRAQS
Trigger: AGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCSQGWS*SKRAQS
Trigger: AGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTACTCCCCATAGTTTaGCAGCTCGTTGACACCCCC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQVLPIV*QLVDTP
Trigger: GGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTAC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGAAGATTGTGACTTCGTaGTCCTTCAGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQKIVTS*SFRGPW
Trigger: CCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCGGCCCGGGTCTGCATaGCCCACACAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCRPGSA*PTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCGGCCCGGGTCTGCATaGCCCACACAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSRPGSA*PTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAAAGTCCAGCATGCCTTaGACGGCCCGGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATKSSMP*TARVCM
Trigger: CATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTT...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATGGCACACGTCCCGATaGACCAGCAGACGATGGGCT +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATWHTSR*TSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATGGCCTTGCCAACTGTaGCTTCCTGTCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKWPCQL*LPVPAV
Trigger: CACGGCTGGGACAGGAAGCCACAGTTGGCAAGGCCA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACAGTGGCGTCCACCTTaGCCGCCAAGTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAQWRPP*PPSQGH
Trigger: ATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNRCSRQ*RPPWPP
Trigger: TGGCGGCCAAGGTGGACGCCACTGCCGACTACATCT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGGTCTGCTGCTCGCTaGGGGCGCCTGAGTACTCCC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLRSAAR*GRLSTP
Trigger: GGGAGTACTCAGGCGCCCCCAGCGAGCAGCAGACCT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGAGGATCTTGCCATCTaGGTGCTTCTCTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPEDLAI*VLLSGH
Trigger: ATGACCCGAGAGAAGCACCCAGATGGCAAGATCCTC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGAGCCCTCCTGATAGTTaGGGCCACCTCTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQSPPDS*GHLFGQ
Trigger: TTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGCCCTCCTGATAGTTaGGGCCACCTCTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRSPPDS*GHLFGQ
Trigger: TTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTVAGWG*AGGPGP
Trigger: TGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPAAVGG*LGMGRW
Trigger: CCACCGGCCCATCCCCAACCAGCCACCCACAGCGGC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVGRCG*LVGDGP
Trigger: CGGCCCATCCCCAACCAGCCACCCACAGCGGCCCAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCAGTGTGGGCCGCTGTaGGTGGCTGGTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFQCGPL*VAGWGW
Trigger: CCATCCCCAACCAGCCACCCACAGCGGCCCACACTG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKRKFAV*AAVGGW
Trigger: CCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCTGTCCTGCTGGGGGCTaGCGTCGATGTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFCPAGG*RRCAPA
Trigger: AGCGGGAGCACATCGACGCCAGCCCCCAGCAGGACA...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTGTCCTGCTGGGGGCTaGCGTCGATGTGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSCPAGG*RRCAPA
Trigger: AGCGGGAGCACATCGACGCCAGCCCCCAGCAGGACA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAAGATGCTGTCCTGCTaGGGGCTGGCGTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFKMLSC*GLASMC
Trigger: GCACATCGACGCCAGCCCCCAGCAGGACAGCATCTT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTTMALV*RLKRVV
Trigger: CACCACCCTCTTCAGCCGCCACACCAAGGCCATTGT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPMVTPF*SAFLIS
Trigger: GCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCAT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGATAGGCCACGCTGCCTaGGCGGTACAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILIGHAA*AVQFGG
Trigger: GCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTAT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKAQAPA*PNWTSE
Trigger: CTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGGGCGGCACCTCCTaGGCAGGTACAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWGGGTS*AGTMTP
Trigger: TGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACCCAGGAGTAGTCCATaGGCACGGTTGGGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRPRSSP*ARLGAA
Trigger: TGCCGCCCCCAACCGTGCCCATGGACTACTCCTGGG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCTCAAACCAAGCTCCCTaGCCCAGGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTASNQAP*PRSSPW
Trigger: CCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGA...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACAAATGATGGTGTTGTaGGCTCCAGAGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKQMMVL*APETAG
Trigger: GCCAGCCGTCTCTGGAGCCCACAACACCATCATTTG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCAAATGATGGTGTTGTaGGCTCCAGAGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAQMMVL*APETAG
Trigger: GCCAGCCGTCTCTGGAGCCCACAACACCATCATTTG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQFARLL*NCLGRH
Trigger: ATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRFARLL*NCLGRH
Trigger: ATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCTACCAAGTTCTGGCTaGGCAGCCAGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWLPSSG*AARGGP
Trigger: AGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTASLPAR*HPLDHR
Trigger: TCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGCTTGTGGTCCCCAGTaGAAGGGTAGACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNACGPQ*KGRPWQ
Trigger: CTGCCATGGTCTACCCTTTCACTGGGGACCACAAGC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAGGATGCCTTCAGCTATaGTGGCGATGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAGCLQL*WRWSGS
Trigger: AGATCCGGACCATCGCCATCATAGCTGAAGGCATCC...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCATGCCTCCGGAACGTaGGACATAGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLHASGT*DIGHAA
Trigger: GGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACATGCCTCCGGAACGTaGGACATAGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRHASGT*DIGHAA
Trigger: GGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTAACACATGATCCATaGATGTGGAGCCCGGGTACC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQVTHDP*MWSPGT
Trigger: GGTACCCGGGCTCCACATTCATGGATCATGTGTTAC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACCTGGGCAGGTACAATaGCTCCATTGGCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAPGQVQ*LHWPRD
Trigger: ATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCGCAGATGCTGGTCATaGACGAGGCAGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNRRCWS*TRQVCG
Trigger: TCCGCAAACCTGCCTCGTTCATGACCAGCATCTGCG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGCATGCCCGCGTAGATaGGCTCCTGTCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWACPRR*APVLAH
Trigger: ATGAGCGAGGACAGGAGCTCATCTACGCGGGCATGC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWETAGP*SAVTIR
Trigger: TCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCATATCATCCCACGGATaGCGATACAGCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAISSHG*RYSPCF
Trigger: GAAGCAGGGGCTGTATCGTCATCCGTGGGATGATAT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACCTAACGCCCTACAATaGGGAAGACCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAPNALQ*GRPHPD
Trigger: GTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGACCTGCTCTACCTCTaGCGAAGTCCGTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLADLLYL*RSPCAA
Trigger: CGCCGCGCACGGACTTCGGCAGAGGTAGAGCAGGTC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGGAAGCCTGTGGCCTTaGCAACTGTGGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNGSLWP*QLWLPV
Trigger: GACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGGTGGCCCAGGGCCATaGCCACAATGGCCGTCATGT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFGGPGP*PQWPSC
Trigger: ACATGACGGCCATTGTGGGCATGGCCCTGGGCCACC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTAAAAAGATGCTGTCCTaGTGGGGGCTGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTKKMLS*WGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGTGGTGCTCTTTCCTTaGAGGGATCTTGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRVVLFP*RDLGLG
Trigger: CCCAAGTCCAAGATCCCTGCAAGGAAAGAGCACCAC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACGGCCCGGGTCTGCATaGCCCACACAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIRPGSA*PTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGAAGTCCAGCATGCCTTaGACGGCCCGGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWKSSMP*TARVCM
Trigger: CATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTCATGGTCTCCATGGTaGTGTCATAGGCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQSWSPW*CHRQSG
Trigger: TCCGCTCTGCCTATGACAGCACCATGGAGACCATGA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGHKHS*FLQSLV
Trigger: AACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGCTCTGAAATTGCCTTaGCCGACATGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRALKLP*PTWLQR
Trigger: TCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGCTCTGAAATTGCCTTaGCCGACATGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAALKLP*PTWLQR
Trigger: TCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCGACGTTTGATCAGCTaGTCTGGCTTGACTACCAAG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPRRLIS*SGLTTK
Trigger: CTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACTTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNFLSQP*LQPGLD
Trigger: GTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAA...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATFLSQP*LQPGLD
Trigger: GTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAATGTAGGCTTCCTCTaGATATGCCTCCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRNVGFL*ICLPPE
Trigger: TTCGGGCGGGAGGCATATCCAGAGGAAGCCTACATT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAAGCCCTCCTGATAGTTaGGGCCACCTCTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSASPPDS*GHLFGQ
Trigger: TTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCT...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGGATGGGGATCCCAGTaGTCTTCCCGACTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKGWGSQ*SSRLLP
Trigger: TGGGAGAAGTCGGGAAGACCACTGGGATCCCCATCC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGGATGGGGATCCCAGTaGTCTTCCCGACTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILGWGSQ*SSRLLP
Trigger: TGGGAGAAGTCGGGAAGACCACTGGGATCCCCATCC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCAGTGTGGGCCGCTGTaGGTGGCTGGTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAQCGPL*VAGWGW
Trigger: CCATCCCCAACCAGCCACCCACAGCGGCCCACACTG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWRKFAV*AAVGGW
Trigger: CCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQPPHRP*TQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKTMALV*RLKRVV
Trigger: CACCACCCTCTTCAGCCGCCACACCAAGGCCATTGT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKMVTPF*SAFLIS
Trigger: GCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCAT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAMVTPF*SAFLIS
Trigger: GCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCAT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGATAGGCCACGCTGCCTaGGCGGTACAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWIGHAA*AVQFGG
Trigger: GCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTAT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCAGAGGAGAACATGGTaGCACACGTCCCGATGCACC +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNQRRTW*HTSRCT
Trigger: GGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCAGCATGGCCAAACTaGACCTCAGAGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRPAWPN*TSEENM
Trigger: CATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGGGGGCGGCACCTCCTaGGCAGGTACAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCGGGTS*AGTMTP
Trigger: TGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACAAATGATGGTGTTGTaGGCTCCAGAGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAQMMVL*APETAG
Trigger: GCCAGCCGTCTCTGGAGCCCACAACACCATCATTTG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCCGATTCTGGATGGCTaGGGTGGTACAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAPILDG*GGTDEL
Trigger: AAGTTCATCTGTACCACCTCAGCCATCCAGAATCGG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACTACCAAGTTCTGGCTaGGCAGCCAGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRLPSSG*AARGGP
Trigger: AGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCGCTGGGGGCGCCTaGGTACTCCCCATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALAGGA*VLPIVC
Trigger: GCAAACTATGGGGAGTACTCAGGCGCCCCCAGCGAG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCTCTCACGATGCCCTTaGACGTGGCAGCCACGTTGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSLSRCP*TWQPRW
Trigger: CCAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKFGQRL*LRAPSG
Trigger: CCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLDHGSH*GLVSGA
Trigger: TGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTDHGSH*GLVSGA
Trigger: TGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGCTTGTGGTCCCCAGTaGAAGGGTAGACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWACGPQ*KGRPWQ
Trigger: CTGCCATGGTCTACCCTTTCACTGGGGACCACAAGC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCCTGGGCAGGTACAATaGCTCCATTGGCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILPGQVQ*LHWPRD
Trigger: ATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCGCAGATGCTGGTCATaGACGAGGCAGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWRRCWS*TRQVCG
Trigger: TCCGCAAACCTGCCTCGTTCATGACCAGCATCTGCG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGCATGCCCGCGTAGATaGGCTCCTGTCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCACPRR*APVLAH
Trigger: ATGAGCGAGGACAGGAGCTCATCTACGCGGGCATGC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGCATGCCCGCGTAGATaGGCTCCTGTCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLACPRR*APVLAH
Trigger: ATGAGCGAGGACAGGAGCTCATCTACGCGGGCATGC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFETAGP*SAVTIR
Trigger: TCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRETAGP*SAVTIR
Trigger: TCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCETAGP*SAVTIR
Trigger: TCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCAAATGCGACTCCGATaGGACCATCTACATTCAGGA +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPQMRLR*DHLHSG
Trigger: TCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCAAGATAGTGTCCAATaGACCCCATACTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPQDSVQ*TPYSFP
Trigger: TGGGAAGGAGTATGGGGTTCATTGGACACTATCTTG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCCTAACGCCCTACAATaGGGAAGACCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNPNALQ*GRPHPD
Trigger: GTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAATGGCCCCATCCCCCTaGCATAAACAGACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKMAPSP*HKQTLV
Trigger: GACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCAT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGACCTGCTCTACCTCTaGCGAAGTCCGTGCGCGGCG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQDLLYL*RSPCAA
Trigger: CGCCGCGCACGGACTTCGGCAGAGGTAGAGCAGGTC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGTTCTTTGCCCGTCTaGTCTGAAATTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRSSLPV*SEIALA
Trigger: GGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCACCCCACTTCACTTTaGAGATGTAGTCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTHPTSL*RCSRQW
Trigger: CCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTTGGCATCGAGGTCTaGAATGTAGGCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRFGIEV*NVGFLW
Trigger: CCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGGTCAGCTTCAGGCTTaGCCCACTTTTGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNGQLQA*PTFGIE
Trigger: CTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGTACTCCCCATAGTTTaGCAGCTCGTTGACACCCCC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKVLPIV*QLVDTP
Trigger: GGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTAC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAAGATTGTGACTTCGTaGTCCTTCAGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILKIVTS*SFRGPW
Trigger: CCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAAAAAAGATGCTGTCCTaGTGGGGGCTGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKKKMLS*WGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAAAAAGATGCTGTCCTaGTGGGGGCTGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNKKMLS*WGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKGLRKR*CPAGGW
Trigger: CCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFRLGLL*RRHLIG
Trigger: GCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCT...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGAGACATAGGCCACGCTaGCTGGGCGGTACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWRHRPR*LGGTVW
Trigger: CCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGGCACACGTCCCGATaGACCAGCAGACGATGGGCT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRWHTSR*TSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCA...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGAACATCTTGGCTGCTaGATCCAAGGCACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTEHLGC*IQGTPK
Trigger: TTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGCTCTGAAATTGCCTTaGCCGACATGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTALKLP*PTWLQR
Trigger: TCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACGACGTTTGATCAGCTaGTCTGGCTTGACTACCAAG +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKRRLIS*SGLTTK
Trigger: CTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCGACGTTTGATCAGCTaGTCTGGCTTGACTACCAAG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRRLIS*SGLTTK
Trigger: CTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTGGCCTTGCCAACTGTaGCTTCCTGTCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLWPCQL*LPVPAV
Trigger: CACGGCTGGGACAGGAAGCCACAGTTGGCAAGGCCA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAGTCCCCTTCTCGGGTaGCATAGATGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKSPLLG*HRCRHR
Trigger: TCTATGTCTGCATCTATGCCACCCGAGAAGGGGACT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGCAGCTTCTGGGCCTTaGCGTCCACATCACCCACGT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSAASGP*RPHHPR
Trigger: ACGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSRCSRQ*RPPWPP
Trigger: TGGCGGCCAAGGTGGACGCCACTGCCGACTACATCT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGGCTTGCCCCACTTTTaGCATCGAGGTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTGLPHF*HRGLQC
Trigger: ACATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIHPRPP*SRSSLW
Trigger: CCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCCCCTAGATCACAGATaGTATCGCTGTACACGACAG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAPLDHR*YRCTRQ
Trigger: CTGTCGTGTACAGCGATACCATCTGTGATCTAGGGG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAGCCCTCCTGATAGTTaGGGCCACCTCTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNSPPDS*GHLFGQ
Trigger: TTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAGCCCTCCTGATAGTTaGGGCCACCTCTTCGGACAA +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSPPDS*GHLFGQ
Trigger: TTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCG +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAVGRCG*LVGDGP
Trigger: CGGCCCATCCCCAACCAGCCACCCACAGCGGCCCAC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFRKFAV*AAVGGW
Trigger: CCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCAAGATGCTGTCCTGCTaGGGGCTGGCGTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCKMLSC*GLASMC
Trigger: GCACATCGACGCCAGCCCCCAGCAGGACAGCATCTT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGAGTTCATGGTCTCCATaGTGCTGTCATAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQSSWSP*CCHRQS
Trigger: GCTCTGCCTATGACAGCACCATGGAGACCATGAACT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACTGGGCGGTACAGTTTaGAGGCCAGGATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATLGGTV*RPGCCP
Trigger: TGGACAACATCCTGGCCTCCAAACTGTACCGCCCAG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTATAGGCCACGCTGCCTaGGCGGTACAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLIGHAA*AVQFGG
Trigger: GCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTAT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFAQAPA*PNWTSE
Trigger: CTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCAAACCAAGCTCCCTaGCCCAGGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSNQAP*PRSSPW
Trigger: CCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGA...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAGSRDG*PVISCH
Trigger: GTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAAATGATGGTGTTGTaGGCTCCAGAGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATQMMVL*APETAG
Trigger: GCCAGCCGTCTCTGGAGCCCACAACACCATCATTTG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGTGCCTGTACCCCAGTaGCTGTTTACATTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFVPVPQ*LFTFQA
Trigger: GGCCTGGAATGTAAACAGCCACTGGGGTACAGGCAC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGTGCCTGTACCCCAGTaGCTGTTTACATTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKVPVPQ*LFTFQA
Trigger: GGCCTGGAATGTAAACAGCCACTGGGGTACAGGCAC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACCGATTCTGGATGGCTaGGGTGGTACAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAPILDG*GGTDEL
Trigger: AAGTTCATCTGTACCACCTCAGCCATCCAGAATCGG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTACCAAGTTCTGGCTaGGCAGCCAGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALPSSG*AARGGP
Trigger: AGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSLPAR*HPLDHR
Trigger: TCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCTCGCTGGGGGCGCCTaGGTACTCCCCATAGTTTGC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLAGGA*VLPIVC
Trigger: GCAAACTATGGGGAGTACTCAGGCGCCCCCAGCGAG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIPWCGG*RGWCSF
Trigger: GAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGCTTGTGGTCCCCAGTaGAAGGGTAGACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSACGPQ*KGRPWQ
Trigger: CTGCCATGGTCTACCCTTTCACTGGGGACCACAAGC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCATGCCTCCGGAACGTaGGACATAGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLHASGT*DIGHAA
Trigger: GGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCATGCCTCCGGAACGTaGGACATAGGCCACGCTGCC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQHASGT*DIGHAA
Trigger: GGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCGTATACAGACTGGATaGTCTCTCCAAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPRIQTG*SLQAHQ
Trigger: TTGATGAGCTTGGAGAGATCATCCAGTCTGTATACG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSQLAHK*WCCGLQ
Trigger: CTGGAGCCCACAACACCATCATTTGTGCGCGAGCTG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFGDQCP*SASLPS
Trigger: AGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNGDQCP*SASLPS
Trigger: AGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAATCGACTTCACTCGGTaGCCAATGCCCATGATCAGC +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKIDFTR*PMPMIS
Trigger: GCTGATCATGGGCATTGGTCACCGAGTGAAGTCGAT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTATCGACTTCACTCGGTaGCCAATGCCCATGATCAGC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFIDFTR*PMPMIS
Trigger: GCTGATCATGGGCATTGGTCACCGAGTGAAGTCGAT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCAAATGCGACTCCGATaGGACCATCTACATTCAGGA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQQMRLR*DHLHSG
Trigger: TCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCAAATGCGACTCCGATaGGACCATCTACATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRQMRLR*DHLHSG
Trigger: TCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCAAGATAGTGTCCAATaGACCCCATACTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQQDSVQ*TPYSFP
Trigger: TGGGAAGGAGTATGGGGTTCATTGGACACTATCTTG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGATATCATCCCACGGATaGCGATACAGCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILISSHG*RYSPCF
Trigger: GAAGCAGGGGCTGTATCGTCATCCGTGGGATGATAT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCTCTGCCGAAGTCCGTaGGCGGCGCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPLCRSP*AALLPQ
Trigger: CTGTGGAAGAAGCGCCGCGCACGGACTTCGGCAGAG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGGCTGCAGAGAGACCTaGTCTACCTCTGCCGAAGTC +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSGCRET*STSAEV
Trigger: GACTTCGGCAGAGGTAGAGCAGGTCTCTCTGCAGCC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGGAAGCCTGTGGCCTTaGCAACTGTGGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCGSLWP*QLWLPV
Trigger: GACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACACCCCACTTCACTTTaGAGATGTAGTCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKHPTSL*RCSRQW
Trigger: CCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACACCCCACTTCACTTTaGAGATGTAGTCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATHPTSL*RCSRQW
Trigger: CCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGGCATCGAGGTCTaGAATGTAGGCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTFGIEV*NVGFLW
Trigger: CCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGTCAGCTTCAGGCTTaGCCCACTTTTGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWGQLQA*PTFGIE
Trigger: CTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGATCTTGCCATCTGGGTaGTTCTCTCGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILILPSG*FSRVMR
Trigger: CCTCATGACCCGAGAGAAGCACCCAGATGGCAAGAT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGC +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIRLGLL*RRHLIG
Trigger: GCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAGTGGTGCTCTTTCCTTaGAGGGATCTTGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATVVLFP*RDLGLG
Trigger: CCCAAGTCCAAGATCCCTGCAAGGAAAGAGCACCAC...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCGGCCCGGGTCTGCATaGCCCACACAATGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRRPGSA*PTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTAAGTCCAGCATGCCTTaGACGGCCCGGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAKSSMP*TARVCM
Trigger: CATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLSQSPA*LARPGS
Trigger: AGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSQSPA*LARPGS
Trigger: AGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTACATCTACCTCCGGATaGTTCCTCATGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFTSTSG*FLMASA
Trigger: GGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAACATCTACCTCCGGATaGTTCCTCATGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATTSTSG*FLMASA
Trigger: GGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGT...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATCATGGTCTCCATGGTaGTGTCATAGGCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATSWSPW*CHRQSG
Trigger: TCCGCTCTGCCTATGACAGCACCATGGAGACCATGA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCATGGTCTCCATGGTaGTGTCATAGGCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSWSPW*CHRQSG
Trigger: TCCGCTCTGCCTATGACAGCACCATGGAGACCATGA...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAAGACATAGGCCACGCTaGCTGGGCGGTACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRRHRPR*LGGTVW
Trigger: CCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCT...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQLVLGY*SFRSLV
Trigger: AACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLVLGY*SFRSLV
Trigger: AACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTGHKHS*FLQSLV
Trigger: AACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAAGCATGTCTACAAATaGGACTCCGATGAGACCATC +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPKHVYK*DSDETI
Trigger: GATGGTCTCATCGGAGTCGCATTTGTAGACATGCTT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRPGSVT*SCVPEE
Trigger: TTCTTCCGGAACACATGAGCATGTAACAGAGCCAGG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKPGSVT*SCVPEE
Trigger: TTCTTCCGGAACACATGAGCATGTAACAGAGCCAGG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGCTCTGAAATTGCCTTaGCCGACATGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNALKLP*PTWLQR
Trigger: TCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGCTCTGAAATTGCCTTaGCCGACATGGCTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFALKLP*PTWLQR
Trigger: TCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCTACTTGAACCGATTCTaGATGGCTGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAYLNRF*MAEVVQ
Trigger: CTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTA...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCCAACAAGCAGCTTCTaGGCCTTGGCGTCCACATCA +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWPTSSF*ALASTS
Trigger: TGATGTGGACGCCAAGGCCCAGAAGCTGCTTGTTGG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACAGTGGCGTCCACCTTaGCCGCCAAGTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRQWRPP*PPSQGH
Trigger: ATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCAGTGGCGTCCACCTTaGCCGCCAAGTCAAGGACAT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLQWRPP*PPSQGH
Trigger: ATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGGATGGGGATCCCAGTaGTCTTCCCGACTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLGWGSQ*SSRLLP
Trigger: TGGGAGAAGTCGGGAAGACCACTGGGATCCCCATCC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCGPCPQ*PSCESL
Trigger: CAGAGACTCACATGACGGCCATTGTGGGCATGGCCC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLGPCPQ*PSCESL
Trigger: CAGAGACTCACATGACGGCCATTGTGGGCATGGCCC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCAGTGTGGGCCGCTGTaGGTGGCTGGTTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRQCGPL*VAGWGW
Trigger: CCATCCCCAACCAGCCACCCACAGCGGCCCACACTG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLARKFAV*AAVGGW
Trigger: CCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFPPHRP*TQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCTMALV*RLKRVV
Trigger: CACCACCCTCTTCAGCCGCCACACCAAGGCCATTGT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTCTGGGCATAGTTCATaGTCTCCATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQSGHSS*SPWCCH
Trigger: ATGACAGCACCATGGAGACCATGAACTATGCCCAGA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCAGAGGAGAACATGGTaGCACACGTCCCGATGCACC +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFQRRTW*HTSRCT
Trigger: GGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCCTCAGAGGAGAACATaGTGGCACACGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCPQRRT*WHTSRC
Trigger: GCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCCAGCATGGCCAAACTaGACCTCAGAGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFPAWPN*TSEENM
Trigger: CATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILAVSEA*LAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCTTCCTTCAAAGCCTaGTTCTTGGCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQASFKA*FLATAV
Trigger: AACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGCTTCCTTCAAAGCCTaGTTCTTGGCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKASFKA*FLATAV
Trigger: AACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGGGGCGGCACCTCCTaGGCAGGTACAATGACTCCA +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTGGGTS*AGTMTP
Trigger: TGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCTGCACTCGCATGTCTaGGTTGTTTATCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTALHSHV*VVYRLH
Trigger: GTGAAGTCGATAAACAACCCAGACATGCGAGTGCAG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACTGGCTAAGGATGCAATaGCCCCATCCCCCTGACATA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNWLRMQ*PHPPDI
Trigger: TATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWFARLL*NCLGRH
Trigger: ATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAA...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCCGATTCTGGATGGCTaGGGTGGTACAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNPILDG*GGTDEL
Trigger: AAGTTCATCTGTACCACCTCAGCCATCCAGAATCGG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCTACCAAGTTCTGGCTaGGCAGCCAGGGGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPLPSSG*AARGGP
Trigger: AGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATGGCAGCCACGTTGGTaGAGTTTGCGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIWQPRW*SLRCCL
Trigger: GAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILFGQRL*LRAPSG
Trigger: CCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAA...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCGTATACAGACTGGATaGTCTCTCCAAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTARIQTG*SLQAHQ
Trigger: TTGATGAGCTTGGAGAGATCATCCAGTCTGTATACG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCGTATACAGACTGGATaGTCTCTCCAAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRIQTG*SLQAHQ
Trigger: TTGATGAGCTTGGAGAGATCATCCAGTCTGTATACG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCGCAGATGCTGGTCATaGACGAGGCAGGTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLARRCWS*TRQVCG
Trigger: TCCGCAAACCTGCCTCGTTCATGACCAGCATCTGCG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCATGCCCGCGTAGATaGGCTCCTGTCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTACPRR*APVLAH
Trigger: ATGAGCGAGGACAGGAGCTCATCTACGCGGGCATGC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLETAGP*SAVTIR
Trigger: TCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGATCGACTTCACTCGGTaGCCAATGCCCATGATCAGC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWIDFTR*PMPMIS
Trigger: GCTGATCATGGGCATTGGTCACCGAGTGAAGTCGAT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCACAAAGATGCCATTaGGGGCTCCAATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQAQRCH*GLQCQY
Trigger: ATATTGACATTGGAGCCCTCAATGGCATCTTTGTGC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGCACAAAGATGCCATTaGGGGCTCCAATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRAQRCH*GLQCQY
Trigger: ATATTGACATTGGAGCCCTCAATGGCATCTTTGTGC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTTCCGGAAGAACATATaGAATATCATCCCACGGATG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPFRKNI*NIIPRM
Trigger: CATCCGTGGGATGATATTTCATATGTTCTTCCGGAA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCCTAACGCCCTACAATaGGGAAGACCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLPNALQ*GRPHPD
Trigger: GTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCATGGCCCCATCCCCCTaGCATAAACAGACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCMAPSP*HKQTLV
Trigger: GACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCAT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCTCTGCCGAAGTCCGTaGGCGGCGCTTCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRLCRSP*AALLPQ
Trigger: CTGTGGAAGAAGCGCCGCGCACGGACTTCGGCAGAG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTGGCCGACATGGCTaGAGAGAGACCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALGRHG*RETCST
Trigger: GGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAGTTCTTTGCCCGTCTaGTCTGAAATTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSSLPV*SEIALA
Trigger: GGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAGTTCTTTGCCCGTCTaGTCTGAAATTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSSLPV*SEIALA
Trigger: GGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTGTAAAGGAGTTCTTTaGCCGTCTGCTCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPCKGVL*PSALKL
Trigger: CAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTASQGWS*SKRAQS
Trigger: AGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCT...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATTTGGCATCGAGGTCTaGAATGTAGGCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATFGIEV*NVGFLW
Trigger: CCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGGTCAGCTTCAGGCTTaGCCCACTTTTGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCGQLQA*PTFGIE
Trigger: CTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGTACTCCCCATAGTTTaGCAGCTCGTTGACACCCCC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLVLPIV*QLVDTP
Trigger: GGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTAC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTCATGTGAGTCTCTGTaGCAAAGACATGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTSCESL*QRHGWG
Trigger: TCCCCATCCATGTCTTTGGCACAGAGACTCACATGA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCATCATGTGAGTCTCTGTaGCAAAGACATGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSASCESL*QRHGWG
Trigger: TCCCCATCCATGTCTTTGGCACAGAGACTCACATGA...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAVEEEV*SVGRCG
Trigger: CCCACAGCGGCCCACACTGCAAACTTCCTCCTCAAC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSGLRKR*CPAGGW
Trigger: CCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCATGCACGGCCCGGGTCTaGATGCCCCACACAATGGCC +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTACTARV*MPHTMA
Trigger: GGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCA...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISQSPA*LARPGS
Trigger: AGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTGGCACACGTCCCGATaGACCAGCAGACGATGGGCT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPWHTSR*TSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTALLYFQ*IIEQRS
Trigger: ACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAAGCATGTCTACAAATaGGACTCCGATGAGACCATC +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKKHVYK*DSDETI
Trigger: GATGGTCTCATCGGAGTCGCATTTGTAGACATGCTT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAPGSVT*SCVPEE
Trigger: TTCTTCCGGAACACATGAGCATGTAACAGAGCCAGG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLDVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSDVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGGCTGCAGAGAGACCTaGTCTACCTGTCTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAGCRET*STCLCR
Trigger: TCGGCAGAGACAGGTAGAGCAGGTCTCTCTGCAGCC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTTGACTACCAAGTTCTaGCTGAGCAGCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSLTTKF*LSSQGW
Trigger: CCACCCCTGGCTGCTCAGCCAGAACTTGGTAGTCAA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTTGATCAGCTGGTCTaGCTTGACTACCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRFDQLV*LDYQVL
Trigger: CAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCGACGTTTGATCAGCTaGTCTGGCTTGACTACCAAG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFRRLIS*SGLTTK
Trigger: CTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAAGTCCCCTTCTCGGGTaGCATAGATGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATSPLLG*HRCRHR
Trigger: TCTATGTCTGCATCTATGCCACCCGAGAAGGGGACT...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCCAACAAGCAGCTTCTaGGCCTTGGCGTCCACATCA +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCPTSSF*ALASTS
Trigger: TGATGTGGACGCCAAGGCCCAGAAGCTGCTTGTTGG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCCAACAAGCAGCTTCTaGGCCTTGGCGTCCACATCA +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLPTSSF*ALASTS
Trigger: TGATGTGGACGCCAAGGCCCAGAAGCTGCTTGTTGG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGTCCAGATCCTCCCTTTaGGGTTCAGCAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWSRSSL*GSARSA
Trigger: AGCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGA...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCCCCTAGATCACAGATaGTATCGCTGTACACGACAG +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFPLDHR*YRCTRQ
Trigger: CTGTCGTGTACAGCGATACCATCTGTGATCTAGGGG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLRKFAV*AAVGGW
Trigger: CCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGAAGATGCTGTCCTGCTaGGGGCTGGCGTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQKMLSC*GLASMC
Trigger: GCACATCGACGCCAGCCCCCAGCAGGACAGCATCTT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTGGCATGGCAGGCTTaGCCTTCTTTGCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVAWQA*PSLQAP
Trigger: TGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTGGCATGGCAGGCTTaGCCTTCTTTGCAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLVAWQA*PSLQAP
Trigger: TGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCAC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAGTTCATGGTCTCCATaGTGCTGTCATAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSSWSP*CCHRQS
Trigger: GCTCTGCCTATGACAGCACCATGGAGACCATGAACT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCTGGGCGGTACAGTTTaGAGGCCAGGATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFLGGTV*RPGCCP
Trigger: TGGACAACATCCTGGCCTCCAAACTGTACCGCCCAG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTATAGGCCACGCTGCCTaGGCGGTACAGTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTIGHAA*AVQFGG
Trigger: GCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTAT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTACCTGTCCCCACCAATaGCCACGCCCTCATAGACGC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPTCPHQ*PRPHRR
Trigger: GCGTCTATGAGGGCGTGGCCATTGGTGGGGACAGGT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGACCTGTCCCCACCAATaGCCACGCCCTCATAGACGC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLTCPHQ*PRPHRR
Trigger: GCGTCTATGAGGGCGTGGCCATTGGTGGGGACAGGT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGACCTGTCCCCACCAATaGCCACGCCCTCATAGACGC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQTCPHQ*PRPHRR
Trigger: GCGTCTATGAGGGCGTGGCCATTGGTGGGGACAGGT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACCTCAGAGGAGAACATaGTGGCACACGTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIPQRRT*WHTSRC
Trigger: GCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGTTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWFQKPG*HKLQHG
Trigger: GCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAA...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATCTTTCCTTGTGGCATaGCAGGCTTGGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATSFLVA*QAWPSL
Trigger: CAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000353196.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATCTTTCCTTGTGGCATaGCAGGCTTGGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKSFLVA*QAWPSL
Trigger: CAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCTCTCACGATGCCTGTaGCTTCCTGTCCCAGCCGTG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLLSRCL*LPVPAV
Trigger: CACGGCTGGGACAGGAAGCCACAGGCATCGTGAGAG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537919.5
CDS-3UTR TCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCTGAGGTGGTACAGATaGACTTGTAAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRLRWYR*TCKGVL
Trigger: AAGAACTCCTTTACAAGTTCATCTGTACCACCTCAG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACTGAGGTGGTACAGATaGACTTGTAAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKLRWYR*TCKGVL
Trigger: AAGAACTCCTTTACAAGTTCATCTGTACCACCTCAG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFSLPAR*HPLDHR
Trigger: TCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACT...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTTGGCAGCCACGTTGGTaGAGTTTGCGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTWQPRW*SLRCCL
Trigger: GAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCA...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLCSRWR*GGSLQC
Trigger: ACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCA...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQCSRWR*GGSLQC
Trigger: ACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGCTTGTGGTCCCCAGTaGAAGGGTAGACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQACGPQ*KGRPWQ
Trigger: CTGCCATGGTCTACCCTTTCACTGGGGACCACAAGC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAGGATGCCTTCAGCTATaGTGGCGATGGTCCGGATCT +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIGCLQL*WRWSGS
Trigger: AGATCCGGACCATCGCCATCATAGCTGAAGGCATCC...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCAGTGGCAGGTCCGATaGTGGTCACTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPQWQVR*WSLPSG
Trigger: ACCAGAAGGGAGTGACCATCATCGGACCTGCCACTG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCAGTGGCAGGTCCGATaGTGGTCACTCCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTQWQVR*WSLPSG
Trigger: ACCAGAAGGGAGTGACCATCATCGGACCTGCCACTG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTAACACATGATCCATaGATGTGGAGCCCGGGTACC +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSVTHDP*MWSPGT
Trigger: GGTACCCGGGCTCCACATTCATGGATCATGTGTTAC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGAACCACAATCATTTTaGCTCCTGGAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTEPQSF*LLECPD
Trigger: ATCAGGACACTCCAGGAGTCAAAATGATTGTGGTTC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTQLAHK*WCCGLQ
Trigger: CTGGAGCCCACAACACCATCATTTGTGCGCGAGCTG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQQLAHK*WCCGLQ
Trigger: CTGGAGCCCACAACACCATCATTTGTGCGCGAGCTG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRGDQCP*SASLPS
Trigger: AGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGCACAAAGATGCCATTaGGGGCTCCAATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTAQRCH*GLQCQY
Trigger: ATATTGACATTGGAGCCCTCAATGGCATCTTTGTGC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCTTCCGGAAGAACATATaGAATATCATCCCACGGATG +
Preference number: 4 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAFRKNI*NIIPRM
Trigger: CATCCGTGGGATGATATTTCATATGTTCTTCCGGAA...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCTTGGCCGACATGGCTaGAGAGAGACCTGCTCTACC +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTLGRHG*RETCST
Trigger: GGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGAGTTCTTTGCCCGTCTaGTCTGAAATTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWSSLPV*SEIALA
Trigger: GGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTGTAAAGGAGTTCTTTaGCCGTCTGCTCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQCKGVL*PSALKL
Trigger: CAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCACCCCACTTCACTTTaGAGATGTAGTCGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCHPTSL*RCSRQW
Trigger: CCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTATCTTGCCATCTGGGTaGTTCTCTCGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSILPSG*FSRVMR
Trigger: CCTCATGACCCGAGAGAAGCACCCAGATGGCAAGAT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTATCTTGCCATCTGGGTaGTTCTCTCGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLILPSG*FSRVMR
Trigger: CCTCATGACCCGAGAGAAGCACCCAGATGGCAAGAT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGAT +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFHVGEV*DAASND
Trigger: ATCATTGGAGGCAGCATCGCAAACTTCACCAACGTG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATCATGTGAGTCTCTGTaGCAAAGACATGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATSCESL*QRHGWG
Trigger: TCCCCATCCATGTCTTTGGCACAGAGACTCACATGA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLVEEEV*SVGRCG
Trigger: CCCACAGCGGCCCACACTGCAAACTTCCTCCTCAAC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIGLRKR*CPAGGW
Trigger: CCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCC...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTSQSPA*LARPGS
Trigger: AGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTACATCTACCTCCGGATaGTTCCTCATGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLTSTSG*FLMASA
Trigger: GGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGAGACATAGGCCACGCTaGCTGGGCGGTACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQRHRPR*LGGTVW
Trigger: CCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILPGSVT*SCVPEE
Trigger: TTCTTCCGGAACACATGAGCATGTAACAGAGCCAGG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLADVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATACTTGAACCGATTCTaGATGGCTGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATYLNRF*MAEVVQ
Trigger: CTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATACTTGAACCGATTCTaGATGGCTGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKYLNRF*MAEVVQ
Trigger: CTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTTTGACTACCAAGTTCTaGCTGAGCAGCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALTTKF*LSSQGW
Trigger: CCACCCCTGGCTGCTCAGCCAGAACTTGGTAGTCAA...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCGACGTTTGATCAGCTaGTCTGGCTTGACTACCAAG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWRRLIS*SGLTTK
Trigger: CTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQFLSQP*LQPGLD
Trigger: GTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLFLSQP*LQPGLD
Trigger: GTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAA...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAATGTAGGCTTCCTCTaGATATGCCTCCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSNVGFL*ICLPPE
Trigger: TTCGGGCGGGAGGCATATCCAGAGGAAGCCTACATT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTCCAGATCCTCCCTTTaGGGTTCAGCAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCSRSSL*GSARSA
Trigger: AGCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGA...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTCCAGATCCTCCCTTTaGGGTTCAGCAAGGTCAGCT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSRSSL*GSARSA
Trigger: AGCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGAGGATCTTGCCATCTaGGTGCTTCTCTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSEDLAI*VLLSGH
Trigger: ATGACCCGAGAGAAGCACCCAGATGGCAAGATCCTC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGAGGATCTTGCCATCTaGGTGCTTCTCTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCEDLAI*VLLSGH
Trigger: ATGACCCGAGAGAAGCACCCAGATGGCAAGATCCTC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGGATGGGGATCCCAGTaGTCTTCCCGACTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQGWGSQ*SSRLLP
Trigger: TGGGAGAAGTCGGGAAGACCACTGGGATCCCCATCC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGATGGGGATCCCAGTaGTCTTCCCGACTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTGWGSQ*SSRLLP
Trigger: TGGGAGAAGTCGGGAAGACCACTGGGATCCCCATCC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSPPHRP*TQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRPPHRP*TQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFPPHRP*TQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPTMALV*RLKRVV
Trigger: CACCACCCTCTTCAGCCGCCACACCAAGGCCATTGT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTGGGCATAGTTCATaGTCTCCATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSGHSS*SPWCCH
Trigger: ATGACAGCACCATGGAGACCATGAACTATGCCCAGA...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACTCTGGGCATAGTTCATaGTCTCCATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNSGHSS*SPWCCH
Trigger: ATGACAGCACCATGGAGACCATGAACTATGCCCAGA...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLMVTPF*SAFLIS
Trigger: GCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCAT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCAGAGGAGAACATGGTaGCACACGTCCCGATGCACC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPQRRTW*HTSRCT
Trigger: GGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIAQAPA*PNWTSE
Trigger: CTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGC...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRFQKPG*HKLQHG
Trigger: GCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAA...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLFQKPG*HKLQHG
Trigger: GCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRAVSEA*LAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSAVSEA*LAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGCTTCCTTCAAAGCCTaGTTCTTGGCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILASFKA*FLATAV
Trigger: AACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTCTTCGTATACAGACTaGATGATCTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRSSYTD*MISPSS
Trigger: TGAGCTTGGAGAGATCATCCAGTCTGTATACGAAGA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTTCAAACCAAGCTCCCTaGCCCAGGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLASNQAP*PRSSPW
Trigger: CCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGA...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCACATCTCAATGAACTaGCAAGAGTACTTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRHISMN*QEYLGN
Trigger: GTTGCCTAAGTACTCTTGCCAGTTCATTGAGATGTG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCTGCACTCGCATGTCTaGGTTGTTTATCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFLHSHV*VVYRLH
Trigger: GTGAAGTCGATAAACAACCCAGACATGCGAGTGCAG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCTGCACTCGCATGTCTaGGTTGTTTATCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILLHSHV*VVYRLH
Trigger: GTGAAGTCGATAAACAACCCAGACATGCGAGTGCAG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTGGCTAAGGATGCAATaGCCCCATCCCCCTGACATA +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLWLRMQ*PHPPDI
Trigger: TATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCTGAGGTGGTACAGATaGACTTGTAAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTLRWYR*TCKGVL
Trigger: AAGAACTCCTTTACAAGTTCATCTGTACCACCTCAG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTCCGATTCTGGATGGCTaGGGTGGTACAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLPILDG*GGTDEL
Trigger: AAGTTCATCTGTACCACCTCAGCCATCCAGAATCGG...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLARSESS*GSLWPC
Trigger: GCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLASLPAR*HPLDHR
Trigger: TCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR TCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCFGQRL*LRAPSG
Trigger: CCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAA...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSFGQRL*LRAPSG
Trigger: CCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGCTTGTGGTCCCCAGTaGAAGGGTAGACCATGGCAG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRACGPQ*KGRPWQ
Trigger: CTGCCATGGTCTACCCTTTCACTGGGGACCACAAGC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGAACCACAATCATTTTaGCTCCTGGAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILEPQSF*LLECPD
Trigger: ATCAGGACACTCCAGGAGTCAAAATGATTGTGGTTC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCCTGGGCAGGTACAATaGCTCCATTGGCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPPGQVQ*LHWPRD
Trigger: ATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAAGGAAGACCCCATCCTaGCAGTACTTAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRRKTPS*QYLDAS
Trigger: GGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCT...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTATGGCCCCATCCCCCTaGCATAAACAGACTCTGGTC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPMAPSP*HKQTLV
Trigger: GACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCAT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGTCAGCTTCAGGCTTaGCCCACTTTTGGCATCGAG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPGQLQA*PTFGIE
Trigger: CTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTACTCCCCATAGTTTaGCAGCTCGTTGACACCCCC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVLPIV*QLVDTP
Trigger: GGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACTGGTAATCTCGAATTaGTCTCACGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATLVISN*SHDALE
Trigger: TTCAAGGGCATCGTGAGAGCAATTCGAGATTACCAG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACTGGTAATCTCGAATTaGTCTCACGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKLVISN*SHDALE
Trigger: TTCAAGGGCATCGTGAGAGCAATTCGAGATTACCAG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCTGGTAATCTCGAATTaGTCTCACGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNLVISN*SHDALE
Trigger: TTCAAGGGCATCGTGAGAGCAATTCGAGATTACCAG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAAGATTGTGACTTCGTaGTCCTTCAGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLKIVTS*SFRGPW
Trigger: CCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGAAGATTGTGACTTCGTaGTCCTTCAGGGGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQKIVTS*SFRGPW
Trigger: CCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRVEEEV*SVGRCG
Trigger: CCCACAGCGGCCCACACTGCAAACTTCCTCCTCAAC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAAAAAGATGCTGTCCTaGTGGGGGCTGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLKKMLS*WGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTAAAAAGATGCTGTCCTaGTGGGGGCTGGCGTCGATG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPKKMLS*WGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPGLRKR*CPAGGW
Trigger: CCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTACATCTACCTCCGGATaGTTCCTCATGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLATSTSG*FLMASA
Trigger: GGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFGHKHS*FLQSLV
Trigger: AACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGAACATCTTGGCTGCTaGATCCAAGGCACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAEHLGC*IQGTPK
Trigger: TTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFLLYFQ*IIEQRS
Trigger: ACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACATTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGATGTTGGTCTTCGGTaGCTGTACCCCAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQDVGLR*LYPSGC
Trigger: ACAGCCACTGGGGTACAGGCACCGAAGACCAACATC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGGCTGCAGAGAGACCTaGTCTACCTGTCTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRGCRET*STCLCR
Trigger: TCGGCAGAGACAGGTAGAGCAGGTCTCTCTGCAGCC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCTGGTAATCTCGAATTaGTCTCACGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCLVISN*SHDACG
Trigger: GCCACAGGCATCGTGAGAGCAATTCGAGATTACCAG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537919.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTTTGACTACCAAGTTCTaGCTGAGCAGCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTLTTKF*LSSQGW
Trigger: CCACCCCTGGCTGCTCAGCCAGAACTTGGTAGTCAA...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGAGGATCTTGCCATCTaGGTGCTTCTCTCGGGTCAT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAEDLAI*VLLSGH
Trigger: ATGACCCGAGAGAAGCACCCAGATGGCAAGATCCTC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCTGGGCGGTACAGTTTaGAGGCCAGGATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLGGTV*RPGCCP
Trigger: TGGACAACATCCTGGCCTCCAAACTGTACCGCCCAG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPAQAPA*PNWTSE
Trigger: CTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSKPGS*LLQFQK
Trigger: CTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGA...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCATCTTCGTATACAGACTaGATGATCTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSASSYTD*MISPSS
Trigger: TGAGCTTGGAGAGATCATCCAGTCTGTATACGAAGA...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTCAAACCAAGCTCCCTaGCCCAGGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQSNQAP*PRSSPW
Trigger: CCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTTCAAACCAAGCTCCCTaGCCCAGGAGTAGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTSNQAP*PRSSPW
Trigger: CCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGA...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACACATCTCAATGAACTaGCAAGAGTACTTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAHISMN*QEYLGN
Trigger: GTTGCCTAAGTACTCTTGCCAGTTCATTGAGATGTG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCACATCTCAATGAACTaGCAAGAGTACTTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTHISMN*QEYLGN
Trigger: GTTGCCTAAGTACTCTTGCCAGTTCATTGAGATGTG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAAATGATGGTGTTGTaGGCTCCAGAGACGGCTGGC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLQMMVL*APETAG
Trigger: GCCAGCCGTCTCTGGAGCCCACAACACCATCATTTG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCATTCAGGATAAGATTTaGCTTCTTCGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPIQDKI*LLRGGN
Trigger: ATTACCACCTCGAAGAAGCCAAATCTTATCCTGAAT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGTGCCTGTACCCCAGTaGCTGTTTACATTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQVPVPQ*LFTFQA
Trigger: GGCCTGGAATGTAAACAGCCACTGGGGTACAGGCAC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTGCCTGTACCCCAGTaGCTGTTTACATTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVPVPQ*LFTFQA
Trigger: GGCCTGGAATGTAAACAGCCACTGGGGTACAGGCAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAGTAGTTAGGAGTCCTTaGACCCACACTTCAGTTACA +
Preference number: 4 (lower is better)
Translates to: LRMQWPHPPDINRLWSATVVRSP*THTSVT
Trigger: TGTAACTGAAGTGTGGGTCCAAGGACTCCTAACTAC...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGTGCTCTTTCCTTGTaGCATGGCAGGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPGALSL*HGRLGL
Trigger: AAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCACC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTGCTCTTTCCTTGTaGCATGGCAGGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTGALSL*HGRLGL
Trigger: AAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCACC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGGTGCTCTTTCCTTGTaGCATGGCAGGCTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLGALSL*HGRLGL
Trigger: AAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCACC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
3UTR CAA 72 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGT +
Preference number: 4 (lower is better)
Translates to: SRLHCQLSVHFF*GEEILSSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACAT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPFARLL*NCLGRH
Trigger: ATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIFGQRL*LRAPSG
Trigger: CCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGTAACACATGATCCATaGATGTGGAGCCCGGGTACC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQVTHDP*MWSPGT
Trigger: GGTACCCGGGCTCCACATTCATGGATCATGTGTTAC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTAACACATGATCCATaGATGTGGAGCCCGGGTACC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLVTHDP*MWSPGT
Trigger: GGTACCCGGGCTCCACATTCATGGATCATGTGTTAC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGAACCACAATCATTTTaGCTCCTGGAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWEPQSF*LLECPD
Trigger: ATCAGGACACTCCAGGAGTCAAAATGATTGTGGTTC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCAAGATAGTGTCCAATaGACCCCATACTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSQDSVQ*TPYSFP
Trigger: TGGGAAGGAGTATGGGGTTCATTGGACACTATCTTG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGATATCATCCCACGGATaGCGATACAGCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQISSHG*RYSPCF
Trigger: GAAGCAGGGGCTGTATCGTCATCCGTGGGATGATAT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACTTCCGGAAGAACATATaGAATATCATCCCACGGATG +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNFRKNI*NIIPRM
Trigger: CATCCGTGGGATGATATTTCATATGTTCTTCCGGAA...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATTCCGGAAGAACATATaGAATATCATCCCACGGATG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKFRKNI*NIIPRM
Trigger: CATCCGTGGGATGATATTTCATATGTTCTTCCGGAA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTAGGAAGACCCCATCCTaGCAGTACTTAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLARKTPS*QYLDAS
Trigger: GGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCCTAACGCCCTACAATaGGGAAGACCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRPNALQ*GRPHPD
Trigger: GTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAATGTAAAGGAGTTCTTTaGCCGTCTGCTCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKCKGVL*PSALKL
Trigger: CAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACA...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGGAAGCCTGTGGCCTTaGCAACTGTGGCTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAGSLWP*QLWLPV
Trigger: GACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATTTGGCATCGAGGTCTaGAATGTAGGCTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIFGIEV*NVGFLW
Trigger: CCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGAT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSHVGEV*DAASND
Trigger: ATCATTGGAGGCAGCATCGCAAACTTCACCAACGTG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTCATGTGAGTCTCTGTaGCAAAGACATGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSCESL*QRHGWG
Trigger: TCCCCATCCATGTCTTTGGCACAGAGACTCACATGA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAVEEEV*SVGRCG
Trigger: CCCACAGCGGCCCACACTGCAAACTTCCTCCTCAAC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTACATCTACCTCCGGATaGTTCCTCATGGCATCAGCC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPTSTSG*FLMASA
Trigger: GGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTCATGGTCTCCATGGTaGTGTCATAGGCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLSWSPW*CHRQSG
Trigger: TCCGCTCTGCCTATGACAGCACCATGGAGACCATGA...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACTCTTATATTCCTCAGTaGCCCCAATCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNSYIPQ*PQSLQE
Trigger: TTCTTGGAGAGATTGGGGGCACTGAGGAATATAAGA...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFLVLGY*SFRSLV
Trigger: AACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGAACATCTTGGCTGCTaGATCCAAGGCACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLEHLGC*IQGTPK
Trigger: TTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGAACATCTTGGCTGCTaGATCCAAGGCACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQEHLGC*IQGTPK
Trigger: TTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWLLYFQ*IIEQRS
Trigger: ACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTACTTGAACCGATTCTaGATGGCTGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSYLNRF*MAEVVQ
Trigger: CTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCCAACAAGCAGCTTCTaGGCCTTGGCGTCCACATCA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRPTSSF*ALASTS
Trigger: TGATGTGGACGCCAAGGCCCAGAAGCTGCTTGTTGG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAATGTAGGCTTCCTCTaGATATGCCTCCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLNVGFL*ICLPPE
Trigger: TTCGGGCGGGAGGCATATCCAGAGGAAGCCTACATT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGAATGTAGGCTTCCTCTaGATATGCCTCCCGCCCGAA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQNVGFL*ICLPPE
Trigger: TTCGGGCGGGAGGCATATCCAGAGGAAGCCTACATT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGGCTTGCCCCACTTTTaGCATCGAGGTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQGLPHF*HRGLQC
Trigger: ACATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAACACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKHPRPP*SRSSLW
Trigger: CCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTG...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGAATCTTGTGGCATaGCAGGCTTGGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALNLVA*QAWPSL
Trigger: CAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATCTGGGCATAGTTCATaGTCTCCATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRSGHSS*SPWCCH
Trigger: ATGACAGCACCATGGAGACCATGAACTATGCCCAGA...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCTGGGCGGTACAGTTTaGAGGCCAGGATGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRLGGTV*RPGCCP
Trigger: TGGACAACATCCTGGCCTCCAAACTGTACCGCCCAG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCCAGCATGGCCAAACTaGACCTCAGAGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQPAWPN*TSEENM
Trigger: CATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCCAGCATGGCCAAACTaGACCTCAGAGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLPAWPN*TSEENM
Trigger: CATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPFQKPG*HKLQHG
Trigger: GCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQFQKPG*HKLQHG
Trigger: GCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLAVSEA*LAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGTCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWSKPGS*LLQFQK
Trigger: CTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGA...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGCTTCCTTCAAAGCCTaGTTCTTGGCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCASFKA*FLATAV
Trigger: AACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCACATCTCAATGAACTaGCAAGAGTACTTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFHISMN*QEYLGN
Trigger: GTTGCCTAAGTACTCTTGCCAGTTCATTGAGATGTG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACTGCACTCGCATGTCTaGGTTGTTTATCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRLHSHV*VVYRLH
Trigger: GTGAAGTCGATAAACAACCCAGACATGCGAGTGCAG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCACAGAACATTTCAGTaGGATACCAAACAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: MQWPHPPDINRLWSATQNHRTFQ*DTKQAL
Trigger: AAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGTG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAGACATAAACAGACTCTaGTCTGCAACACAGAACATT +
Preference number: 4 (lower is better)
Translates to: WLRMQWPHPPDINRLWSADINRL*SATQNI
Trigger: AATGTTCTGTGTTGCAGACCAGAGTCTGTTTATGTC...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTGGCTAAGGATGCAATaGCCCCATCCCCCTGACATA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQWLRMQ*PHPPDI
Trigger: TATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATCTTTCCTTGTGGCATaGCAGGCTTGGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISFLVA*QAWPSL
Trigger: CAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353196.5
ENST00000537919.5
CDS-3UTR TCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGAACCACAATCATTTTaGCTCCTGGAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFEPQSF*LLECPD
Trigger: ATCAGGACACTCCAGGAGTCAAAATGATTGTGGTTC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCGTATACAGACTGGATaGTCTCTCCAAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCRIQTG*SLQAHQ
Trigger: TTGATGAGCTTGGAGAGATCATCCAGTCTGTATACG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCACCTGGGCAGGTACAATaGCTCCATTGGCCACGAGAT +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAPGQVQ*LHWPRD
Trigger: ATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGG...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAGCATGCCCGCGTAGATaGGCTCCTGTCCTCGCTCAT +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKACPRR*APVLAH
Trigger: ATGAGCGAGGACAGGAGCTCATCTACGCGGGCATGC...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGATATCATCCCACGGATaGCGATACAGCCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRISSHG*RYSPCF
Trigger: GAAGCAGGGGCTGTATCGTCATCCGTGGGATGATAT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAGGAAGACCCCATCCTaGCAGTACTTAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLRKTPS*QYLDAS
Trigger: GGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAGTTCTTTGCCCGTCTaGTCTGAAATTGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLSSLPV*SEIALA
Trigger: GGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGATCTTGCCATCTGGGTaGTTCTCTCGGGTCATGAGG +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRILPSG*FSRVMR
Trigger: CCTCATGACCCGAGAGAAGCACCCAGATGGCAAGAT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATCATGTGAGTCTCTGTaGCAAAGACATGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISCESL*QRHGWG
Trigger: TCCCCATCCATGTCTTTGGCACAGAGACTCACATGA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQGHKHS*FLQSLV
Trigger: AACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGAACATCTTGGCTGCTaGATCCAAGGCACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSREHLGC*IQGTPK
Trigger: TTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCAAGCATGTCTACAAATaGGACTCCGATGAGACCATC +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCKHVYK*DSDETI
Trigger: GATGGTCTCATCGGAGTCGCATTTGTAGACATGCTT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAPGSVT*SCVPEE
Trigger: TTCTTCCGGAACACATGAGCATGTAACAGAGCCAGG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTTTGATCAGCTGGTCTaGCTTGACTACCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSFDQLV*LDYQVL
Trigger: CAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGGCTTGCCCCACTTTTaGCATCGAGGTCTGCAATGT +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRGLPHF*HRGLQC
Trigger: ACATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCCCCTAGATCACAGATaGTATCGCTGTACACGACAG +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLPLDHR*YRCTRQ
Trigger: CTGTCGTGTACAGCGATACCATCTGTGATCTAGGGG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCTGAATCTTGTGGCATaGCAGGCTTGGCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLNLVA*QAWPSL
Trigger: CAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTAGTTCATGGTCTCCATaGTGCTGTCATAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPSSWSP*CCHRQS
Trigger: GCTCTGCCTATGACAGCACCATGGAGACCATGAACT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRAVSEA*LAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGTAGTTAGGAGTCCTTaGACCCACACTTCAGTTACA +
Preference number: 4 (lower is better)
Translates to: ESNILTPYNEEDPILTVLVVRSP*THTSVT
Trigger: TGTAACTGAAGTGTGGGTCCAAGGACTCCTAACTAC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
3UTR CAA 72 bp CAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QLSVHFFLGEEI*SSVYCSRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACTGAGGTGGTACAGATaGACTTGTAAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRLRWYR*TCKGVL
Trigger: AAGAACTCCTTTACAAGTTCATCTGTACCACCTCAG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCACGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTARSESS*GSLWPC
Trigger: GCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCG...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATGGCAGCCACGTTGGTaGAGTTTGCGATGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKWQPRW*SLRCCL
Trigger: GAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKCSRWR*GGSLQC
Trigger: ACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAGDQCP*SASLPS
Trigger: AGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAAATGCGACTCCGATaGGACCATCTACATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLQMRLR*DHLHSG
Trigger: TCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGCACAAAGATGCCATTaGGGGCTCCAATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAAQRCH*GLQCQY
Trigger: ATATTGACATTGGAGCCCTCAATGGCATCTTTGTGC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCAAGATAGTGTCCAATaGACCCCATACTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPQDSVQ*TPYSFP
Trigger: TGGGAAGGAGTATGGGGTTCATTGGACACTATCTTG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAAGATAGTGTCCAATaGACCCCATACTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLQDSVQ*TPYSFP
Trigger: TGGGAAGGAGTATGGGGTTCATTGGACACTATCTTG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTGTAAAGGAGTTCTTTaGCCGTCTGCTCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSCKGVL*PSALKL
Trigger: CAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGAT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQHVGEV*DAASND
Trigger: ATCATTGGAGGCAGCATCGCAAACTTCACCAACGTG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGAT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTHVGEV*DAASND
Trigger: ATCATTGGAGGCAGCATCGCAAACTTCACCAACGTG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAAGACATAGGCCACGCTaGCTGGGCGGTACAGTTTGG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKRHRPR*LGGTVW
Trigger: CCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCT...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTCTTATATTCCTCAGTaGCCCCAATCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSYIPQ*PQSLQE
Trigger: TTCTTGGAGAGATTGGGGGCACTGAGGAATATAAGA...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLLVLGY*SFRSLV
Trigger: AACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTLVLGY*SFRSLV
Trigger: AACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLALLYFQ*IIEQRS
Trigger: ACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAG...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTACTTGAACCGATTCTaGATGGCTGAGGTGGTACAG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPYLNRF*MAEVVQ
Trigger: CTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATTTGATCAGCTGGTCTaGCTTGACTACCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIFDQLV*LDYQVL
Trigger: CAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGAGTCCCCTTCTCGGGTaGCATAGATGCAGACATAGA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRSPLLG*HRCRHR
Trigger: TCTATGTCTGCATCTATGCCACCCGAGAAGGGGACT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGAGTTCATGGTCTCCATaGTGCTGTCATAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRSSWSP*CCHRQS
Trigger: GCTCTGCCTATGACAGCACCATGGAGACCATGAACT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCTGCACTCGCATGTCTaGGTTGTTTATCGACTTCAC +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLHSHV*VVYRLH
Trigger: GTGAAGTCGATAAACAACCCAGACATGCGAGTGCAG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACACAGAACATTTCAGTaGGATACCAAACAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SNILTPYNEEDPILTVLRHRTFQ*DTKQAL
Trigger: AAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGTG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCACCGATTCTGGATGGCTaGGGTGGTACAGATGAACTT +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAPILDG*GGTDEL
Trigger: AAGTTCATCTGTACCACCTCAGCCATCCAGAATCGG...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGAACCACAATCATTTTaGCTCCTGGAGTGTCCTGAT +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLEPQSF*LLECPD
Trigger: ATCAGGACACTCCAGGAGTCAAAATGATTGTGGTTC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCGTATACAGACTGGATaGTCTCTCCAAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPRIQTG*SLQAHQ
Trigger: TTGATGAGCTTGGAGAGATCATCCAGTCTGTATACG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCAAATGCGACTCCGATaGGACCATCTACATTCAGGA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRQMRLR*DHLHSG
Trigger: TCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGCTGGTAATCTCGAATTaGTCTCACGATGCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLVISN*SHDALE
Trigger: TTCAAGGGCATCGTGAGAGCAATTCGAGATTACCAG...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR GCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTTCTTATATTCCTCAGTaGCCCCAATCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLASYIPQ*PQSLQE
Trigger: TTCTTGGAGAGATTGGGGGCACTGAGGAATATAAGA...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATATCTTATATTCCTCAGTaGCCCCAATCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISYIPQ*PQSLQE
Trigger: TTCTTGGAGAGATTGGGGGCACTGAGGAATATAAGA...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTAAGCATGTCTACAAATaGGACTCCGATGAGACCATC +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPKHVYK*DSDETI
Trigger: GATGGTCTCATCGGAGTCGCATTTGTAGACATGCTT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPLSSVY*SRVPGS
Trigger: AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATTGACTACCAAGTTCTaGCTGAGCAGCCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKLTTKF*LSSQGW
Trigger: CCACCCCTGGCTGCTCAGCCAGAACTTGGTAGTCAA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTTTGATCAGCTGGTCTaGCTTGACTACCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPFDQLV*LDYQVL
Trigger: CAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTTTTGATCAGCTGGTCTaGCTTGACTACCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTFDQLV*LDYQVL
Trigger: CAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAA...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGTCTGGGCATAGTTCATaGTCTCCATGGTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRSGHSS*SPWCCH
Trigger: ATGACAGCACCATGGAGACCATGAACTATGCCCAGA...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKAQAPA*PNWTSE
Trigger: CTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGC...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQSKPGS*LLQFQK
Trigger: CTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGCTTCCTTCAAAGCCTaGTTCTTGGCTACTGCAGTT +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRASFKA*FLATAV
Trigger: AACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTTCTTCGTATACAGACTaGATGATCTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLASSYTD*MISPSS
Trigger: TGAGCTTGGAGAGATCATCCAGTCTGTATACGAAGA...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGACATAAACAGACTCTaGTCTGCAACACAGAACATT +
Preference number: 4 (lower is better)
Translates to: NILTPYNEEDPILTVLRCDINRL*SATQNI
Trigger: AATGTTCTGTGTTGCAGACCAGAGTCTGTTTATGTC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCTGAGGTGGTACAGATaGACTTGTAAAGGAGTTCTT +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPLRWYR*TCKGVL
Trigger: AAGAACTCCTTTACAAGTTCATCTGTACCACCTCAG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAACGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKRSESS*GSLWPC
Trigger: GCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCG...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTTGTAAAGGAGTTCTTTaGCCGTCTGCTCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTCKGVL*PSALKL
Trigger: CAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACA...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR GCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATCATGGTCTCCATGGTaGTGTCATAGGCAGAGCGGA +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKSWSPW*CHRQSG
Trigger: TCCGCTCTGCCTATGACAGCACCATGGAGACCATGA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR GCA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTCTTATATTCCTCAGTaGCCCCAATCTCTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPSYIPQ*PQSLQE
Trigger: TTCTTGGAGAGATTGGGGGCACTGAGGAATATAAGA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKMVTPF*SAFLIS
Trigger: GCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCAT...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTCTTCGTATACAGACTaGATGATCTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLSSYTD*MISPSS
Trigger: TGAGCTTGGAGAGATCATCCAGTCTGTATACGAAGA...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTATTCAGGATAAGATTTaGCTTCTTCGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSIQDKI*LLRGGN
Trigger: ATTACCACCTCGAAGAAGCCAAATCTTATCCTGAAT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCATTCAGGATAAGATTTaGCTTCTTCGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFIQDKI*LLRGGN
Trigger: ATTACCACCTCGAAGAAGCCAAATCTTATCCTGAAT...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAGACATAAACAGACTCTaGTCTGCAACACAGAACATT +
Preference number: 4 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIDINRL*SATQNI
Trigger: AATGTTCTGTGTTGCAGACCAGAGTCTGTTTATGTC...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTAGTTAGGAGTCCTTaGACCCACACTTCAGTTACA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRVVRSP*THTSVT
Trigger: TGTAACTGAAGTGTGGGTCCAAGGACTCCTAACTAC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAAGGAAGACCCCATCCTaGCAGTACTTAGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKRKTPS*QYLDAS
Trigger: GGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCT...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAACCCCTAGATCACAGATaGTATCGCTGTACACGACAG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKPLDHR*YRCTRQ
Trigger: CTGTCGTGTACAGCGATACCATCTGTGATCTAGGGG...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCATCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTASKPGS*LLQFQK
Trigger: CTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGA...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGTCTTCGTATACAGACTaGATGATCTCTCCAAGCTCA +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRSSYTD*MISPSS
Trigger: TGAGCTTGGAGAGATCATCCAGTCTGTATACGAAGA...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTATTCAGGATAAGATTTaGCTTCTTCGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAIQDKI*LLRGGN
Trigger: ATTACCACCTCGAAGAAGCCAAATCTTATCCTGAAT...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCACAGAACATTTCAGTaGGATACCAAACAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRHRTFQ*DTKQAL
Trigger: AAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGTG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCACACATCTCAATGAACTaGCAAGAGTACTTAGGCAAC +
Preference number: 4 (lower is better)
Translates to: EEDPILTVLRCFHIINTAHISMN*QEYLGN
Trigger: GTTGCCTAAGTACTCTTGCCAGTTCATTGAGATGTG...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGATTCAGGATAAGATTTaGCTTCTTCGAGGTGGTAAT +
Preference number: 4 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQIQDKI*LLRGGN
Trigger: ATTACCACCTCGAAGAAGCCAAATCTTATCCTGAAT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGCTGTACACTTTTTCTTaGGGGAAGAGATCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRLYTFS*GKRSCL
Trigger: AAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAG...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAGCACAAAGATGCCATTaGGGGCTCCAATGTCAATAT +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKAQRCH*GLQCQY
Trigger: ATATTGACATTGGAGCCCTCAATGGCATCTTTGTGC...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKSKPGS*LLQFQK
Trigger: CTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR TCA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATTCCGGAAGAACATATaGAATATCATCCCACGGATG +
Preference number: 4 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKFRKNI*NIIPRM
Trigger: CATCCGTGGGATGATATTTCATATGTTCTTCCGGAA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS GCA 90 bp GGGGGCTGGCGTCGATGTGCTCCCGCTGGCGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGGTGGCTGGTTGGGGATGGGCCGGTG +
Preference number: 5 (lower is better)
Translates to: GGWRRCAPAGVEEEV*SVGRCGWLVGDGPV
Trigger: CACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCACATCGACGCCAGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 90 bp GGCGTCGATGTGCTCCCGCTGGCGTTGAGGAGGAAGTTTGCAGTGTaGGCCGCTGTGGGTGGCTGGTTGGGGATGGGCCGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GVDVLPLALRRKFAV*AAVGGWLGMGRWPR
Trigger: CCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCACATCGACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 90 bp CTGGCGTTGAGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACAATGGCC +
Preference number: 5 (lower is better)
Translates to: LALRRKFAVWAAVGG*LGMGRWPRAMPTMA
Trigger: GGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 90 bp CCCGCTGGCGTTGAGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACAAT +
Preference number: 5 (lower is better)
Translates to: PAGVEEEVCSVGRCG*LVGDGPVAQGHAHN
Trigger: ATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 90 bp GGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTGGCTGGTTGGGGATaGGCCGGTGGCCCAGGGCCATGCCCACAATGGCCGTCATGTGAG +
Preference number: 5 (lower is better)
Translates to: GGSLQCGPLWVAGWG*AGGPGPCPQWPSCE
Trigger: CTCACATGACGGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPAVGGW*GMGRWP
Trigger: GGGCCACCGGCCCATCCCCAACCAGCCACCCACAGC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp GTGGCTGGTTGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTGTGCCAAAGACATGGATGGGGATCC +
Preference number: 5 (lower is better)
Translates to: VAGWGWAGGPGPCPQ*PSCESLCQRHGWGS
Trigger: GGATCCCCATCCATGTCTTTGGCACAGAGACTCACATGACGGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS TCA 90 bp GGGATGGGCCGGTGGCCCAGGGCCATGCCCACAATGGCCGTCATGTaGGTCTCTGTGCCAAAGACATGGATGGGGATCCCAGTGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GMGRWPRAMPTMAVM*VSVPKTWMGIPVVF
Trigger: GAAGACCACTGGGATCCCCATCCATGTCTTTGGCACAGAGACTCACATGACGGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS GCA 90 bp CTTCTTTGCAGGCGCCACCTCATCGGCCCTGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGGCGTCGATGTGCTCCCGCTGGCGTT +
Preference number: 5 (lower is better)
Translates to: LLCRRHLIGPGLRKR*CPAGGWRRCAPAGV
Trigger: AACGCCAGCGGGAGCACATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp CCACTGAGGGCTCGTCTCGGGAGCAGACATAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCTGCATGCCCCACACAATGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: PLRARLGSRHSQSPA*LARPGSACPTQWPW
Trigger: CCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACTATGTCTGCTCCCGAGACGAGCCCTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp GCATGGCAGGCTTGGCCTTCTTTGCAGGCGCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTGTCCTGCTGGGGGCTGGCGTCGATG +
Preference number: 5 (lower is better)
Translates to: AWQAWPSLQAPPHRP*TQKKMLSCWGLASM
Trigger: CATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp CCTTGCACGGCCCGGGTCTGCATGCCCCACACAATGGCCTTGGTGTaGCGGCTGAAGAGGGTGGTGCTCTTTCCTTGCAGGGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: PCTARVCMPHTMALV*RLKRVVLFPCRDLG
Trigger: TCCAAGATCCCTGCAAGGAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAAGTCCATGGGCACGGTaGGGGGCGGCACCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKSPWAR*GAAPPG
Trigger: CCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACT...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGGATCCGGCTTTaGTCCCGGCCCAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRPGIRL*SRPSRT
Trigger: AGTCCGGCTGGGCCGGGACAAAAGCCGGATCCCGGG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353196.5
ENST00000393896.6
CDS GCA 90 bp TCTGGCTTGACTACCAAGTTCTGGCTGAGCAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCTGTGTCAGGAGTGACCCGAGCATAC +
Preference number: 5 (lower is better)
Translates to: SGLTTKFWLSSQGWS*SKRAQSVSGVTRAY
Trigger: GTATGCTCGGGTCACTCCTGACACAGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAGTCAAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CCA 90 bp AGATGGTATCGCTGTACACGACAGAGGCGCCACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGGGGTTCAGCAAGGTCAGCTTCAGGC +
Preference number: 5 (lower is better)
Translates to: RWYRCTRQRRHPRPP*SRSSLWGSARSASG
Trigger: GCCTGAAGCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTGGCGCCTCTGTCGTGTACAGCGATACCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILAVGGW*GMGRWP
Trigger: GGGCCACCGGCCCATCCCCAACCAGCCACCCACAGC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp CCTCAGCCTGACTGTGGGGGACGAAGGGCTCGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGCCAACTGTGGCTTCCTGTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: PQPDCGGRRARSESS*GSLWPCQLWLPVPA
Trigger: GGCTGGGACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCGAGCCCTTCGTCCCCCACAGTCAGGCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAAGTCCATGGGCACGGTaGGGGGCGGCACCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: LRMQWPHPPDINRLWSATSPWAR*GAAPPG
Trigger: CCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACT...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACCCGGGATCCGGCTTTaGTCCCGGCCCAGCCGGACT +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKPGIRL*SRPSRT
Trigger: AGTCCGGCTGGGCCGGGACAAAAGCCGGATCCCGGG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000353196.5
ENST00000393896.6
CDS GCA 90 bp CCTCGTGGTGGAACAGGACGTAGTCCCCTTCTCGGGTGGCATAGATaGAGACATAGAACTCCTCAGCCTGACTGTGGGGGACGAAGGGCT +
Preference number: 5 (lower is better)
Translates to: PRGGTGRSPLLGWHR*RHRTPQPDCGGRRA
Trigger: AGCCCTTCGTCCCCCACAGTCAGGCTGAGGAGTTCTATGTCTGCATCTATGCCACCCGAGAAGGGGACTACGTCCTGTTCCACCACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590735.1
CDS GCA 90 bp GCCTCCCATGCTTCAGGTGGGAGAGTTATAGTTCAGCGTAGCAGCTaGTTGCCCAGAGACACACAGCGCAGATGGGCAGCTCCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: ASHASGGRVIVQRSS*LPRDTQRRWAAPVP
Trigger: TGGGACAGGAGCTGCCCATCTGCGCTGTGTGTCTCTGGGCAAGCAGCTGCTACGCTGAACTATAACTCTCCCACCTGAAGCATGGGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CCA 90 bp CTCCGGAACGTGAGACATAGGCCACGCTGCCTGGGCGGTACAGTTTaGAGGCCAGGATGTTGTCCAGCATCCCACCTGTGTTGCCAATCT +
Preference number: 5 (lower is better)
Translates to: LRNVRHRPRCLGGTV*RPGCCPASHLCCQS
Trigger: AGATTGGCAACACAGGTGGGATGCTGGACAACATCCTGGCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCTCACGTTCCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp ATCTCGAATTGCTCTCACGATGCCTGTGGCTTCCTGTCCCAGCCGTaGCTTCAGCCAGGACTTGACCCCATCCAGAGTGAGGTTGACCCC +
Preference number: 5 (lower is better)
Translates to: ISNCSHDACGFLSQP*LQPGLDPIQSEVDP
Trigger: GGGGTCAACCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAAGCCACAGGCATCGTGAGAGCAATTCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537919.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPGFSQD*TPSRVR
Trigger: CCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGCAGTGGCGTCCACCTaGGCCGCCAAGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAAVAST*AAKSRT
Trigger: TGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFAVGGW*GMGRWP
Trigger: GGGCCACCGGCCCATCCCCAACCAGCCACCCACAGC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRQAWPS*QAPPHR
Trigger: CCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGG +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKQAWPS*QAPPHR
Trigger: CCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKCGMAG*AFFAGA
Trigger: GGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACA...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAACCCCACACAATGGCCTaGGTGTGGCGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKPHTMA*VWRLKR
Trigger: CCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGG...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPKVQHA*HGPGLH
Trigger: ATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp CTTCTGCTTGTGGTCCCCAGTGAAAGGGTAGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCAGACATAGTCAAAGTCCAGCATGCC +
Preference number: 5 (lower is better)
Translates to: LLLVVPSERVDHGSH*GLVSGADIVKVQHA
Trigger: GGCATGCTGGACTTTGACTATGTCTGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTCTACCCTTTCACTGGGGACCACAAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp CCGAGAGATGATATTGTTGAGCTCGTTGGACATGCCTCCGGAACGTaGGACATAGGCCACGCTGCCTGGGCGGTACAGTTTGGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: PRDDIVELVGHASGT*DIGHAAWAVQFGGQ
Trigger: CTGGCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATGTCCAACGAGCTCAACAATATCATCTCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp GAGGGTGGTGCTCTTTCCTTGTGGCATGGCAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGCCCTGGACTCAGAAAAAGATGCTGT +
Preference number: 5 (lower is better)
Translates to: EGGALSLWHGRLGLL*RRHLIGPGLRKRCC
Trigger: ACAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCACCACCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS CCA 90 bp GGGCAGCTCCTGTCCCAGTGTCTTCTCCACCCCTTTAAGAGACCCTaGGGCAAGAGCTCCCTACCTGACCTGGGAACTCATGGTAACTTG +
Preference number: 5 (lower is better)
Translates to: GQLLSQCLLHPFKRP*GKSSLPDLGTHGNL
Trigger: CAAGTTACCATGAGTTCCCAGGTCAGGTAGGGAGCTCTTGCCCCAGGGTCTCTTAAAGGGGTGGAGAAGACACTGGGACAGGAGCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAGFSQD*TPSRVR
Trigger: CCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAGGAAGCCTGTGGCCTaGCCAACTGTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPRKPVA*PTVASC
Trigger: ACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCCT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGTCCAGATCCTCCCTTaGGGGTTCAGCAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPVQILP*GFSKVS
Trigger: GCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGAC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGCTCTCACGATGCCCTaGAACGTGGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKALTMP*NVAATL
Trigger: CAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAGC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRVLPLA*RRKFAV
Trigger: CACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCAC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCCCCACACAATGGCCTaGGTGTGGCGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTPHTMA*VWRLKR
Trigger: CCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRKVQHA*HGPGLH
Trigger: ATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRVRRPS*MPRQIL
Trigger: TAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCAC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQVRRPS*MPRQIL
Trigger: TAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCAC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAGTCCATGGGCACGGTaGGGGGCGGCACCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSSPWAR*GAAPPG
Trigger: CCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp TTGATGCCTCCAACAGTGGCAGGTCCGATGATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGCTTTCTCGTGAGGGCCTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LMPPTVAGPMMVTPF*SAFLISFLVRASGM
Trigger: CATCCCTGAGGCCCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCATCATCGGACCTGCCACTGTTGGAGGCATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp CCCAGCTCGCGCACAAATGATGGTGTTGTGGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCACCATCAGACACATCTCAATGAACTG +
Preference number: 5 (lower is better)
Translates to: PSSRTNDGVVGSRDG*PVISCHHQTHLNEL
Trigger: CAGTTCATTGAGATGTGTCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCCCACAACACCATCATTTGTGCGCGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp CCTGGGGCAAGAGCTCCCTACCTGACCTGGGAACTCATGGTAACTTaGCTCTGGCTCAAACTCTGCTTTCAAGGCCCCTTCCCTGCTTTC +
Preference number: 5 (lower is better)
Translates to: PGARAPYLTWELMVT*LWLKLCFQGPFPAF
Trigger: GAAAGCAGGGAAGGGGCCTTGAAAGCAGAGTTTGAGCCAGAGCCAAGTTACCATGAGTTCCCAGGTCAGGTAGGGAGCTCTTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGGAAGCCTGTGGCCTaGCCAACTGTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTARKPVA*PTVASC
Trigger: ACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCCT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAGCAGCTTCTGGGCCTaGGCGTCCACATCACCCACG +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSSFWA*ASTSPT
Trigger: CGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGCT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAGCAGCTTCTGGGCCTaGGCGTCCACATCACCCACG +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFSSFWA*ASTSPT
Trigger: CGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGCT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGCAGTGGCGTCCACCTaGGCCGCCAAGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFAVAST*AAKSRT
Trigger: TGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTCCAGATCCTCCCTTaGGGGTTCAGCAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQVQILP*GFSKVS
Trigger: GCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGAC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCGTCCAGATCCTCCCTTaGGGGTTCAGCAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAVQILP*GFSKVS
Trigger: GCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGAC...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLAVGGW*GMGRWP
Trigger: GGGCCACCGGCCCATCCCCAACCAGCCACCCACAGC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILCGMAG*AFFAGA
Trigger: GGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACA...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCCCCACACAATGGCCTaGGTGTGGCGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILPHTMA*VWRLKR
Trigger: CCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCCCCACACAATGGCCTaGGTGTGGCGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNPHTMA*VWRLKR
Trigger: CCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTCCCCACACAATGGCCTaGGTGTGGCGGCTGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFPHTMA*VWRLKR
Trigger: CCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGG...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTGGAGGCCAGGATGTaGTCCAGCATCCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRLEARM*SSIPPV
Trigger: CACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAAGTCCATGGGCACGGTaGGGGGCGGCACCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISPWAR*GAAPPG
Trigger: CCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp AAAGGAGTTCTTTGCCCGTCTGCTCTGAAATTGCCTTGGCCGACATaGCTGCAGAGAGACCTGCTCTACCTGTCTCTGCCGAAGTCCGTG +
Preference number: 5 (lower is better)
Translates to: KGVLCPSALKLPWPT*LQRDLLYLSLPKSV
Trigger: CACGGACTTCGGCAGAGACAGGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACCGTCTGCTCTGAAATaGCCTTGGCCGACATGGCTG +
Preference number: 5 (lower is better)
Translates to: WLRMQWPHPPDINRLWSAPSALK*PWPTWL
Trigger: CAGCCATGTCGGCCAAGGCAATTTCAGAGCAGACGG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILGFSQD*TPSRVR
Trigger: CCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAGGCTTGCCCCACTTTaGGCATCGAGGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRLAPL*ASRSAM
Trigger: CATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAACGTGGCAGCCACGTaGGTGAAGTTTGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTANVAAT*VKFAML
Trigger: CAGCATCGCAAACTTCACCAACGTGGCTGCCACGTT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGAACGTGGCAGCCACGTaGGTGAAGTTTGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRNVAAT*VKFAML
Trigger: CAGCATCGCAAACTTCACCAACGTGGCTGCCACGTT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRAVGGW*GMGRWP
Trigger: GGGCCACCGGCCCATCCCCAACCAGCCACCCACAGC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILVLPLA*RRKFAV
Trigger: CACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCAC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGGTGGTGCTCTTTCCTaGCAGGGATCTTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRGGALS*QGSWTW
Trigger: CCAAGTCCAAGATCCCTGCAAGGAAAGAGCACCACC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTGGAGGCCAGGATGTaGTCCAGCATCCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTLEARM*SSIPPV
Trigger: CACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACCTGGGCGGTACAGTTaGGAGGCCAGGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKPGRYS*EARMLS
Trigger: GGACAACATCCTGGCCTCCAAACTGTACCGCCCAGG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTAGTCCATGGGCACGGTaGGGGGCGGCACCTCCTGGG +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTSPWAR*GAAPPG
Trigger: CCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGCACAAATGATGGTGTaGTGGGCTCCAGAGACGGCT +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKAQMMV*WAPETA
Trigger: AGCCGTCTCTGGAGCCCACAACACCATCATTTGTGC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp GTAAGCCCTCCTGATAGTTGGGGCCACCTCTTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGGGGCCCTGGTAATCTCGAATTGCTC +
Preference number: 5 (lower is better)
Translates to: VSPPDSWGHLFGQRL*LRAPSGGPGNLELL
Trigger: GAGCAATTCGAGATTACCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAAGAGGTGGCCCCAACTATCAGGAGGGCTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS GCA 90 bp TGCTCTCACGATGCCCTTGAACGTGGCAGCCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGATGAGGATCTTGCCATCTGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CSHDALERGSHVGEV*DAASNDEDLAIWVL
Trigger: AAGCACCCAGATGGCAAGATCCTCATCATTGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590770.5
CDS CCA 90 bp GGAACTCGATGTCACCCCACTTCACTTTGCAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCAAGTCAAGGACATAGACTCCATCTT +
Preference number: 5 (lower is better)
Translates to: GTRCHPTSLCRCSRQ*RPPWPPSQGHRLHL
Trigger: AAGATGGAGTCTATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTGACATCGAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590735.1
CDS CCA 90 bp GCTTCCTTCAAAGCCTGGTTCTTGGCTACTGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCATGGCCAAACTGGACCTCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASFKAWFLATAVSEA*LAQAPAWPNWTSEE
Trigger: CTCCTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp AGCTCCGGGGCACAAACACTCCTGCTTCCTTCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAGCCTGGTTGGCACAAGCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: SSGAQTLLLPSKPGS*LLQFQKPGWHKLQH
Trigger: ATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCCCGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp AAAGGAGTTCTTTGCCCGTCTGCTCTGAAATTGCCTTGGCCGACATaGCTGCAGAGAGACCTGCTCTACCTGTCACGTATGCCTCATCCC +
Preference number: 5 (lower is better)
Translates to: KGVLCPSALKLPWPT*LQRDLLYLSRMPHP
Trigger: GGGATGAGGCATACGTGACAGGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTGTCCAGATCCTCCCTTaGGGGTTCAGCAAGGTCAGC +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFVQILP*GFSKVS
Trigger: GCTGACCTTGCTGAACCCCAAAGGGAGGATCTGGAC...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGG +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFQAWPS*QAPPHR
Trigger: CCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTG...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCTGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFCGMAG*AFFAGA
Trigger: GGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACA...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTGGTGGTGCTCTTTCCTaGCAGGGATCTTGGACTTGG +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTGGALS*QGSWTW
Trigger: CCAAGTCCAAGATCCCTGCAAGGAAAGAGCACCACC...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCGGAGAGAGGCAAAGTaGATGAGCACATCTACCTCC +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRRREAK*MSTSTS
Trigger: GGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCG...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRLKHPG*MPPTVA
Trigger: TGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAA...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGATGCCCATCTCTTCCTaGAAGACCTCAGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRMPISS*KTSVMG
Trigger: GCCCATCACTGAGGTCTTCAAGGAAGAGATGGGCAT...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCACTCGCATGTCTGGGTaGTTTATCGACTTCACTCGG +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPTRMSG*FIDFTR
Trigger: CCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp GCAGAGCGGAGAGAGGCAAAGTTGATGAGCACATCTACCTCCGGATaGTTCCTCATGGCATCAGCCATGTTCTTGAAGACAGGGATCAGG +
Preference number: 5 (lower is better)
Translates to: AERREAKLMSTSTSG*FLMASAMFLKTGIR
Trigger: CCTGATCCCTGTCTTCAAGAACATGGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp GGGCACAAACACTCCTGCTTCCTTCAAAGCCTGGTTCTTGGCTACTaGAGTTTCAGAAGCCTGGTTGGCACAAGCTCCAGCATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GHKHSCFLQSLVLGY*SFRSLVGTSSSMAK
Trigger: TTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp CCTTCAAAGCCTGGTTCTTGGCTACTGCAGTTTCAGAAGCCTGGTTaGCACAAGCTCCAGCATGGCCAAACTGGACCTCAGAGGAGAACA +
Preference number: 5 (lower is better)
Translates to: PSKPGSWLLQFQKPG*HKLQHGQTGPQRRT
Trigger: TGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 90 bp TCCACCCCTTTAAGAGACCCTGGGGCAAGAGCTCCCTACCTGACCTaGGAACTCATGGTAACTTGGCTCTGGCTCAAACTCTGCTTTCAA +
Preference number: 5 (lower is better)
Translates to: STPLRDPGARAPYLT*ELMVTWLWLKLCFQ
Trigger: TTGAAAGCAGAGTTTGAGCCAGAGCCAAGTTACCATGAGTTCCCAGGTCAGGTAGGGAGCTCTTGCCCCAGGGTCTCTTAAAGGGGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTASFPRR*ISWSGL
Trigger: CAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACT...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACCATCCAGAGTGAGGTaGACCCCAACGAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKPSRVR*TPTRPS
Trigger: ACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACCCATCCAGAGTGAGGTaGACCCCAACGAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNPSRVR*TPTRPS
Trigger: ACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGG...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAGGCTTGCCCCACTTTaGGCATCGAGGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFRLAPL*ASRSAM
Trigger: CATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAGGTCAGCTTCAGGCTaGCCCCACTTTTGGCATCGA +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNRSASG*PHFWHR
Trigger: TCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACCT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTAGGTCAGCTTCAGGCTaGCCCCACTTTTGGCATCGA +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFRSASG*PHFWHR
Trigger: TCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACCT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAAACGTGGCAGCCACGTaGGTGAAGTTTGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: LRMQWPHPPDINRLWSATNVAAT*VKFAML
Trigger: CAGCATCGCAAACTTCACCAACGTGGCTGCCACGTT...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGCTCTCACGATGCCCTaGAACGTGGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFALTMP*NVAATL
Trigger: CAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAGC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLVLPLA*RRKFAV
Trigger: CACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCAC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRVLPLA*RRKFAV
Trigger: CACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCAC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGG +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIQAWPS*QAPPHR
Trigger: CCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTTGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLACGMAG*AFFAGA
Trigger: GGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACA...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCACGGAGAGAGGCAAAGTaGATGAGCACATCTACCTCC +
Preference number: 5 (lower is better)
Translates to: WLRMQWPHPPDINRLWSARREAK*MSTSTS
Trigger: GGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCG...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCATTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: WLRMQWPHPPDINRLWSALKHPG*MPPTVA
Trigger: TGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAA...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTLKHPG*MPPTVA
Trigger: TGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAA...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQSIPPV*PILKHP
Trigger: TGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACCTGGGCGGTACAGTTaGGAGGCCAGGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRPGRYS*EARMLS
Trigger: GGACAACATCCTGGCCTCCAAACTGTACCGCCCAGG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGATATTGTTGAGCTCGTaGGACATGCCTCCGGAACGT +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQILLSS*DMPPER
Trigger: ACGTTCCGGAGGCATGTCCAACGAGCTCAACAATAT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCGTCCGAGAGATGATATaGTTGAGCTCGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPVREMI*LSSLDM
Trigger: CATGTCCAACGAGCTCAACAATATCATCTCTCGGAC...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNVSEAW*AQAPAW
Trigger: CCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAAC...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACAGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: LRMQWPHPPDINRLWSATVSEAW*AQAPAW
Trigger: CCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAAC...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTATGCCCATCTCTTCCTaGAAGACCTCAGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTMPISS*KTSVMG
Trigger: GCCCATCACTGAGGTCTTCAAGGAAGAGATGGGCAT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCCTTCCTTCTTCATCTaGTTCACAAACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPPSFFI*FTNSMG
Trigger: CCCCATGGAGTTTGTGAACAAGATGAAGAAGGAAGG...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGACTCGCATGTCTGGGTaGTTTATCGACTTCACTCGG +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQTRMSG*FIDFTR
Trigger: CCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp GGTGGTACAGATGAACTTGTAAAGGAGTTCTTTGCCCGTCTGCTCTaGAATTGCCTTGGCCGACATGGCTGCAGAGAGACCTGCTCTACC +
Preference number: 5 (lower is better)
Translates to: GGTDELVKEFFARLL*NCLGRHGCRETCST
Trigger: GGTAGAGCAGGTCTCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACAAGTTCATCTGTACCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS TCA 90 bp GTTCTGAGCTGGTCCTTGCTCATCAAGCAACCTCTGGGTATCACCTaGGATGGCCAAGTGTTTGGCTGCCTAGAAGGTGGTGTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: VLSWSLLIKQPLGIT*DGQVFGCLEGGVLN
Trigger: ATTCAGGACACCACCTTCTAGGCAGCCAAACACTTGGCCATCTCAGGTGATACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS GCA 90 bp TCCCTGCTTTCCCCAAACCACTTTCCCCAGAAACTGCACCACTGTTaGAACTGTTACCTTGAACGTGGCAGCCACGTTGGTGAAGTTTGC +
Preference number: 5 (lower is better)
Translates to: SLLSPNHFPQKLHHC*NCYLERGSHVGEVC
Trigger: GCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACAGTGGTGCAGTTTCTGGGGAAAGTGGTTTGGGGAAAGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGTGACCCGAGCATACTaGAACCGATTCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILVTRAY*NRFWMA
Trigger: AGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCAC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACATCAGCTGGTCTGGCTaGACTACCAAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNISWSG*TTKFWL
Trigger: CAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGAT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTATCAGCTGGTCTGGCTaGACTACCAAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRPLLNKAGSTASCLYTFISWSG*TTKFWL
Trigger: CAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGAT...AAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: WLRMQWPHPPDINRLWSASFPRR*ISWSGL
Trigger: CAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACT...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGGAAGCCTGTGGCCTaGCCAACTGTGGCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLRKPVA*PTVASC
Trigger: ACAGGAAGCCACAGTTGGCAAGGCCACAGGCTTCCT...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAGCAGCTTCTGGGCCTaGGCGTCCACATCACCCACG +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLSSFWA*ASTSPT
Trigger: CGTGGGTGATGTGGACGCCAAGGCCCAGAAGCTGCT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGGCCAGAATTTCTTTCTaGTCTTCAGGGGCGTGGACC +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILARISF*SSGAWT
Trigger: GGTCCACGCCCCTGAAGACAAGAAAGAAATTCTGGC...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCCAGAATTTCTTTCTaGTCTTCAGGGGCGTGGACC +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKARISF*SSGAWT
Trigger: GGTCCACGCCCCTGAAGACAAGAAAGAAATTCTGGC...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGCAGTGGCGTCCACCTaGGCCGCCAAGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQAVAST*AAKSRT
Trigger: TGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCCAATGATGAGGATCTaGCCATCTGGGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTPMMRI*PSGCFS
Trigger: AGAGAAGCACCCAGATGGCAAGATCCTCATCATTGG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCC +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPCGMAG*AFFAGA
Trigger: GGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIKVQHA*HGPGLH
Trigger: ATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGCGGAGAGAGGCAAAGTaGATGAGCACATCTACCTCC +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILRREAK*MSTSTS
Trigger: GGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCG...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACGGAGAGAGGCAAAGTaGATGAGCACATCTACCTCC +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKRREAK*MSTSTS
Trigger: GGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTTCTGGTCCGCCTTCTaGATCAGCTTTCTCGTGAGG +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILFWSAF*ISFLVR
Trigger: CCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAA...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILLKHPG*MPPTVA
Trigger: TGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAA...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTGGAGGCCAGGATGTaGTCCAGCATCCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: NILTPYNEEDPILTVLRCLEARM*SSIPPV
Trigger: CACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACCTGGGCGGTACAGTTaGGAGGCCAGGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIPGRYS*EARMLS
Trigger: GGACAACATCCTGGCCTCCAAACTGTACCGCCCAGG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTATATTGTTGAGCTCGTaGGACATGCCTCCGGAACGT +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTILLSS*DMPPER
Trigger: ACGTTCCGGAGGCATGTCCAACGAGCTCAACAATAT...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAAGTCCGAGAGATGATATaGTTGAGCTCGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: WSSVPVPQWLFTFQAPAKVREMI*LSSLDM
Trigger: CATGTCCAACGAGCTCAACAATATCATCTCTCGGAC...TTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGTCCGAGAGATGATATaGTTGAGCTCGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQVREMI*LSSLDM
Trigger: CATGTCCAACGAGCTCAACAATATCATCTCTCGGAC...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGGGTACAATGACTCCATaGGCCACGAGATCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: PVDVGLRCLYPSGCLHSRGTMTP*ATRSSY
Trigger: ATACGAAGATCTCGTGGCCAATGGAGTCATTGTACC...CCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACATGAACGAGGCAGGTTaGCGGATCAAACCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNMNEAG*RIKPSS
Trigger: GGAGCTTGGTTTGATCCGCAAACCTGCCTCGTTCAT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGCACAAATGATGGTGTaGTGGGCTCCAGAGACGGCT +
Preference number: 5 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWAQMMV*WAPETA
Trigger: AGCCGTCTCTGGAGCCCACAACACCATCATTTGTGC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCCCTTCCTTCTTCATCTaGTTCACAAACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAPSFFI*FTNSMG
Trigger: CCCCATGGAGTTTGTGAACAAGATGAAGAAGGAAGG...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp ATCTGCACTCGCATGTCTGGGTTGTTTATCTTCCCTGCTTGGTTCTaGGCTGGTCCTTGCTCATCAAGCAACCTCTGGGTATCACCTGAG +
Preference number: 5 (lower is better)
Translates to: ICTRMSGLFIFPAWF*AGPCSSSNLWVSPE
Trigger: CTCAGGTGATACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS GCA 90 bp GATGATCTCTCCAAGCTCATCAAAGCTCCGGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTTCTTGGCTACTGCAGTTTCAGAAGC +
Preference number: 5 (lower is better)
Translates to: DDLSKLIKAPGHKHS*FLQSLVLGYCSFRS
Trigger: GCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCCCGGAGCTTTGATGAGCTTGGAGAGATCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp TGTTGCAACTGTTACCTTGAACGTGGCAGCCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGATGAGGATCTTGCCATCTGGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CCNCYLERGSHVGEV*DAASNDEDLAIWVL
Trigger: AAGCACCCAGATGGCAAGATCCTCATCATTGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS GCA 90 bp GACCTGCTCTACCTGTCACGTATGCCTCATCCCTATTCGGAACTTTaGCTCCAACCCTCTTCCTGTTTTCTTGGCTGTCTTACAAGGGAG +
Preference number: 5 (lower is better)
Translates to: DLLYLSRMPHPYSEL*LQPSSCFLGCLTRE
Trigger: CTCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAATAGGGATGAGGCATACGTGACAGGTAGAGCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS CCA 90 bp GAAGTGCTGCCTGACGTAATCTTTGAGGATCTGCACTCGCATGTCTaGGTTGTTTATCTTCCCTGCTTGGTTCTGAGCTGGTCCTTGCTC +
Preference number: 5 (lower is better)
Translates to: EVLPDVIFEDLHSHV*VVYLPCLVLSWSLL
Trigger: GAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGATCCTCAAAGATTACGTCAGGCAGCACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTGCTCTGAAATTGCCTaGGCCGACATGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLCSEIA*ADMAAE
Trigger: CTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNSFPRR*ISWSGL
Trigger: CAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCCCATCCAGAGTGAGGTaGACCCCAACGAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: NILTPYNEEDPILTVLRCPSRVR*TPTRPS
Trigger: ACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGG...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAAGGCTTGCCCCACTTTaGGCATCGAGGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRRLAPL*ASRSAM
Trigger: CATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCT...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTAGGTCAGCTTCAGGCTaGCCCCACTTTTGGCATCGA +
Preference number: 5 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSRSASG*PHFWHR
Trigger: TCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACCT...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAACCAATGATGAGGATCTaGCCATCTGGGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKPMMRI*PSGCFS
Trigger: AGAGAAGCACCCAGATGGCAAGATCCTCATCATTGG...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCAACGTGGCAGCCACGTaGGTGAAGTTTGCGATGCTG +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFNVAAT*VKFAML
Trigger: CAGCATCGCAAACTTCACCAACGTGGCTGCCACGTT...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGCTCTCACGATGCCCTaGAACGTGGCAGCCACGTTG +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPALTMP*NVAATL
Trigger: CAACGTGGCTGCCACGTTCAAGGGCATCGTGAGAGC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTG +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVLPLA*RRKFAV
Trigger: CACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLKVQHA*HGPGLH
Trigger: ATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: SRLHCQLSVHFFLGEEILSIPPV*PILKHP
Trigger: TGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCT...CAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCCTGGGCGGTACAGTTaGGAGGCCAGGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLPGRYS*EARMLS
Trigger: GGACAACATCCTGGCCTCCAAACTGTACCGCCCAGG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCCTGGGCGGTACAGTTaGGAGGCCAGGATGTTGTCC +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPPGRYS*EARMLS
Trigger: GGACAACATCCTGGCCTCCAAACTGTACCGCCCAGG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLVRRPS*MPRQIL
Trigger: TAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCAC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTVRRPS*MPRQIL
Trigger: TAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCAC...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: NILTPYNEEDPILTVLRCVSEAW*AQAPAW
Trigger: CCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAAC...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLVSEAW*AQAPAW
Trigger: CCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAAC...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCTGTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGTTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ACGCWSSVPVPQWLFTFQFKAWF*ATAVSE
Trigger: TTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAA...CTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCACAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCTTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTAFKAWF*ATAVSE
Trigger: TTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAA...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGCACAAATGATGGTGTaGTGGGCTCCAGAGACGGCT +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRAQMMV*WAPETA
Trigger: AGCCGTCTCTGGAGCCCACAACACCATCATTTGTGC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTCCTTCCTTCTTCATCTaGTTCACAAACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: HSRPLLNKAGSTASCLYTPSFFI*FTNSMG
Trigger: CCCCATGGAGTTTGTGAACAAGATGAAGAAGGAAGG...AGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAACTCGCATGTCTGGGTaGTTTATCGACTTCACTCGG +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKTRMSG*FIDFTR
Trigger: CCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCTCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPSVHFF*GEEILS
Trigger: AGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GTGGATGTTGGTCTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCAAATATGAAGCTTCTTaGTGTGGACTGAAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: VDVGLRCLYPSGCLHSRPKYEAS*CGLKGC
Trigger: ACACCCCTTCAGTCCACACAAAGAAGCTTCATATTT...GGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAGACCAACATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGGTGGTGCTCTTTCCTaGTGGCATGGCAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLGGALS*WHGRLG
Trigger: GCCAAGCCTGCCATGCCACAAGGAAAGAGCACCACC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS TCA 90 bp TGTGTCAGGAGTGACCCGAGCATACTTGAACCGATTCTGGATGGCTaGGGTGGTACAGATGAACTTGTAAAGGAGTTCTTTGCCCGTCTG +
Preference number: 5 (lower is better)
Translates to: CVRSDPSILEPILDG*GGTDELVKEFFARL
Trigger: CAGACGGGCAAAGAACTCCTTTACAAGTTCATCTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCACTCCTGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS TCA 90 bp GCACATCTACCTCCGGATGCTTCCTCATGGCATCAGCCATGTTCTTaGAGACAGGGATCAGGATCTCTTTGTGCCCCCAGTAAAACTTCT +
Preference number: 5 (lower is better)
Translates to: AHLPPDASSWHQPCS*RQGSGSLCAPSKTS
Trigger: AGAAGTTTTACTGGGGGCACAAAGAGATCCTGATCCCTGTCTTCAAGAACATGGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp ATCTTTGAGGATCTGCACTCGCATGTCTGGGTTGTTTATCTTCCCTaGTTGGTTCTGAGCTGGTCCTTGCTCATCAAGCAACCTCTGGGT +
Preference number: 5 (lower is better)
Translates to: IFEDLHSHVWVVYLP*LVLSWSLLIKQPLG
Trigger: ACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGATCCTCAAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CCA 90 bp TCATCCCTATTCGGAACTTTGCCTCCAACCCTCTTCCTGTTTTCTTaGCTGTCTTACAAGGGAGCCTTTTCAGGCAGCAACTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SSLFGTLPPTLFLFS*LSYKGAFSGSNSRE
Trigger: CTCTCTGGAGTTGCTGCCTGAAAAGGCTCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAATAGGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS-3UTR CAA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTGACCCGAGCATACTaGAACCGATTCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSVTRAY*NRFWMA
Trigger: AGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCAC...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCGTGACCCGAGCATACTaGAACCGATTCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFVTRAY*NRFWMA
Trigger: AGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCAC...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAGCCAGAATTTCTTTCTaGTCTTCAGGGGCGTGGACC +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRARISF*SSGAWT
Trigger: GGTCCACGCCCCTGAAGACAAGAAAGAAATTCTGGC...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGCCAATGATGAGGATCTaGCCATCTGGGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWPMMRI*PSGCFS
Trigger: AGAGAAGCACCCAGATGGCAAGATCCTCATCATTGG...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRKVQHA*HGPGLH
Trigger: ATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCTTCTGGTCCGCCTTCTaGATCAGCTTTCTCGTGAGG +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFFWSAF*ISFLVR
Trigger: CCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAA...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCA +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLLKHPG*MPPTVA
Trigger: TGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTTGGAGGCCAGGATGTaGTCCAGCATCCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQLEARM*SSIPPV
Trigger: CACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGATATTGTTGAGCTCGTaGGACATGCCTCCGGAACGT +
Preference number: 5 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWILLSS*DMPPER
Trigger: ACGTTCCGGAGGCATGTCCAACGAGCTCAACAATAT...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACGAGAGATGATATTGTaGAGCTCGTTGGACATGCCT +
Preference number: 5 (lower is better)
Translates to: LRMQWPHPPDINRLWSATREMIL*SSLDMP
Trigger: AGGCATGTCCAACGAGCTCAACAATATCATCTCTCG...TGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTA +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRVRRPS*MPRQIL
Trigger: TAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCAC...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGG +
Preference number: 5 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAVSEAW*AQAPAW
Trigger: CCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAAC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAGCAGGCTCCACTGCCTCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PSGCLHSRPLLNKAGSTASVHFF*GEEILS
Trigger: AGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA...GGCAGTGGAGCCTGCTTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp GATAAGATTTGGCTTCTTCGAGGTGGTAATCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGTGGCAGGGAAGTGCTGCCTGACGTA +
Preference number: 5 (lower is better)
Translates to: DKIWLLRGGNLLYFQ*IIEQRSGREVLPDV
Trigger: TACGTCAGGCAGCACTTCCCTGCCACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAGATTACCACCTCGAAGAAGCCAAATCTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000588779.1
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGTGCTCTGAAATTGCCTaGGCCGACATGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLCSEIA*ADMAAE
Trigger: CTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCA...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRSFPRR*ISWSGL
Trigger: CAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACT...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTCCATCCAGAGTGAGGTaGACCCCAACGAGACCAAGT +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTPSRVR*TPTRPS
Trigger: ACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGG...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTAGFSQD*TPSRVR
Trigger: CCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGAGGTCAGCTTCAGGCTaGCCCCACTTTTGGCATCGA +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQRSASG*PHFWHR
Trigger: TCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACCT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACCAATGATGAGGATCTaGCCATCTGGGTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRPMMRI*PSGCFS
Trigger: AGAGAAGCACCCAGATGGCAAGATCCTCATCATTGG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: NILTPYNEEDPILTVLRCSIPPV*PILKHP
Trigger: TGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCCCTGCTAAATAAAGCAGGCTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGTACAATGACTCCATaGGCCACGAGATCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: PLLNKAGSTASCLYTFSWGTMTP*ATRSSY
Trigger: ATACGAAGATCTCGTGGCCAATGGAGTCATTGTACC...CCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAGCCTGCTTTATTTAGCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATGAACGAGGCAGGTTaGCGGATCAAACCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIMNEAG*RIKPSS
Trigger: GGAGCTTGGTTTGATCCGCAAACCTGCCTCGTTCAT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGCACAAATGATGGTGTaGTGGGCTCCAGAGACGGCT +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLAQMMV*WAPETA
Trigger: AGCCGTCTCTGGAGCCCACAACACCATCATTTGTGC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCACTCGCATGTCTGGGTaGTTTATCGACTTCACTCGG +
Preference number: 5 (lower is better)
Translates to: NILTPYNEEDPILTVLRCTRMSG*FIDFTR
Trigger: CCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT...GCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TGGCTAAGGATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCATCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: WLRMQWPHPPDINRLWSASVHFF*GEEILS
Trigger: AGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA...TGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCATCCTTAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGGTGGTGCTCTTTCCTaGTGGCATGGCAGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTAGGALS*WHGRLG
Trigger: GCCAAGCCTGCCATGCCACAAGGAAAGAGCACCACC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000353196.5
ENST00000537919.5
CDS TCA 90 bp GCATGTCTGGGTTGTTTATCGACTTCACTCGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCTTCATCTTGTTCACAAACTCCATGG +
Preference number: 5 (lower is better)
Translates to: ACLGCLSTSLGDQCP*SASLPSSSCSQTPW
Trigger: CCATGGAGTTTGTGAACAAGATGAAGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACCGAGTGAAGTCGATAAACAACCCAGACATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTGACCCGAGCATACTaGAACCGATTCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVTRAY*NRFWMA
Trigger: AGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGGTGACCCGAGCATACTaGAACCGATTCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLVTRAY*NRFWMA
Trigger: AGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCAC...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGATCAGCTGGTCTGGCTaGACTACCAAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLISWSG*TTKFWL
Trigger: CAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGAT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTATCAGCTGGTCTGGCTaGACTACCAAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTISWSG*TTKFWL
Trigger: CAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGAT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGATCAGCTGGTCTGGCTaGACTACCAAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQISWSG*TTKFWL
Trigger: CAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGAT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTG +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHISFPRR*ISWSGL
Trigger: CAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACT...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGCCAGAATTTCTTTCTaGTCTTCAGGGGCGTGGACC +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQARISF*SSGAWT
Trigger: GGTCCACGCCCCTGAAGACAAGAAAGAAATTCTGGC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAGCAGTGGCGTCCACCTaGGCCGCCAAGTCAAGGACA +
Preference number: 5 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKAVAST*AAKSRT
Trigger: TGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGC...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGAGGCTTGCCCCACTTTaGGCATCGAGGTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRRLAPL*ASRSAM
Trigger: CATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS-3UTR CAA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAACAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGG +
Preference number: 5 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKQAWPS*QAPPHR
Trigger: CCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTG...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCGGAGAGAGGCAAAGTaGATGAGCACATCTACCTCC +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPRREAK*MSTSTS
Trigger: GGAGGTAGATGTGCTCATCAACTTTGCCTCTCTCCG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTTCTGGTCCGCCTTCTaGATCAGCTTTCTCGTGAGG +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQFWSAF*ISFLVR
Trigger: CCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTTTCTGGTCCGCCTTCTaGATCAGCTTTCTCGTGAGG +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPFWSAF*ISFLVR
Trigger: CCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAA...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGACGAGAGATGATATTGTaGAGCTCGTTGGACATGCCT +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRREMIL*SSLDMP
Trigger: AGGCATGTCCAACGAGCTCAACAATATCATCTCTCG...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGATGAACGAGGCAGGTTaGCGGATCAAACCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQMNEAG*RIKPSS
Trigger: GGAGCTTGGTTTGATCCGCAAACCTGCCTCGTTCAT...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTATGAACGAGGCAGGTTaGCGGATCAAACCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTMNEAG*RIKPSS
Trigger: GGAGCTTGGTTTGATCCGCAAACCTGCCTCGTTCAT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTATGCCCATCTCTTCCTaGAAGACCTCAGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTMPISS*KTSVMG
Trigger: GCCCATCACTGAGGTCTTCAAGGAAGAGATGGGCAT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGATGCCCATCTCTTCCTaGAAGACCTCAGTGATGGGC +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLMPISS*KTSVMG
Trigger: GCCCATCACTGAGGTCTTCAAGGAAGAGATGGGCAT...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTCCTTCCTTCTTCATCTaGTTCACAAACTCCATGGGG +
Preference number: 5 (lower is better)
Translates to: FLGEEILSSVYCSRVPGSPSFFI*FTNSMG
Trigger: CCCCATGGAGTTTGTGAACAAGATGAAGAAGGAAGG...AGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATGCAATGGCCCCATCCCCCTGACATAAACAGACTCTGGTCTGCAACACAGAACAAATATGAAGCTTCTTaGTGTGGACTGAAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: MQWPHPPDINRLWSATQNKYEAS*CGLKGC
Trigger: ACACCCCTTCAGTCCACACAAAGAAGCTTCATATTT...GTTCTGTGTTGCAGACCAGAGTCTGTTTATGTCAGGGGGATGGGGCCATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CTTCGGTGCCTGTACCCCAGTGGCTGTTTACATTCCAGGCCCCTGCTAAATAAAAAATATGAAGCTTCTTaGTGTGGACTGAAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: LRCLYPSGCLHSRPLLNKKYEAS*CGLKGC
Trigger: ACACCCCTTCAGTCCACACAAAGAAGCTTCATATTT...TTTATTTAGCAGGGGCCTGGAATGTAAACAGCCACTGGGGTACAGGCACCGAAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCCTGGTAATCTCGAATaGCTCTCACGATGCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PAVCTLFLGGRDLVFSLLPGNLE*LSRCLW
Trigger: CCACAGGCATCGTGAGAGCAATTCGAGATTACCAGG...CAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537919.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCATGCTCTGAAATTGCCTaGGCCGACATGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTACSEIA*ADMAAE
Trigger: CTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCA...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAAGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGG +
Preference number: 5 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKGFSQD*TPSRVR
Trigger: CCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCC...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTATATTGTTGAGCTCGTaGGACATGCCTCCGGAACGT +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPILLSS*DMPPER
Trigger: ACGTTCCGGAGGCATGTCCAACGAGCTCAACAATAT...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTATATTGTTGAGCTCGTaGGACATGCCTCCGGAACGT +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTILLSS*DMPPER
Trigger: ACGTTCCGGAGGCATGTCCAACGAGCTCAACAATAT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATACGAGAGATGATATTGTaGAGCTCGTTGGACATGCCT +
Preference number: 5 (lower is better)
Translates to: TPYNEEDPILTVLRCFHIREMIL*SSLDMP
Trigger: AGGCATGTCCAACGAGCTCAACAATATCATCTCTCG...TATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCTTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: ILTPYNEEDPILTVLRCFFKAWF*ATAVSE
Trigger: TTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAA...GAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRFKAWF*ATAVSE
Trigger: TTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAA...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTGGTACAATGACTCCATaGGCCACGAGATCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: FSWGKRSCLQFTAVGFLAGTMTP*ATRSSY
Trigger: ATACGAAGATCTCGTGGCCAATGGAGTCATTGTACC...AGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGCACAAATGATGGTGTaGTGGGCTCCAGAGACGGCT +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTAAQMMV*WAPETA
Trigger: AGCCGTCTCTGGAGCCCACAACACCATCATTTGTGC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGATTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRLGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAAAGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTTTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 5 (lower is better)
Translates to: ESNILTPYNEEDPILTVLLGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...AAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCTGTTACATGCTCATGTGTTCCGGAA +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVY*SRVPGSVTCSCVPE
Trigger: TTCCGGAACACATGAGCATGTAACAGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp TCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: SVHFFLGEEILSSVYCSRSIPPV*PILKHP
Trigger: TGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCT...CCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATTGGAGGCCAGGATGTaGTCCAGCATCCCACCTGTG +
Preference number: 5 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKLEARM*SSIPPV
Trigger: CACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTCGAGAGATGATATTGTaGAGCTCGTTGGACATGCCT +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPREMIL*SSLDMP
Trigger: AGGCATGTCCAACGAGCTCAACAATATCATCTCTCG...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp CACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGTCCGAGAGATGATATaGTTGAGCTCGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: HFFLGEEILSSVYCSRVPVREMI*LSSLDM
Trigger: CATGTCCAACGAGCTCAACAATATCATCTCTCGGAC...AGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGGGTACAATGACTCCATaGGCCACGAGATCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQGTMTP*ATRSSY
Trigger: ATACGAAGATCTCGTGGCCAATGGAGTCATTGTACC...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp AGCAACATCCTAACGCCCTACAATGAGGAAGACCCCATCCTGACAGTACTTAGAAAATATGAAGCTTCTTaGTGTGGACTGAAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: SNILTPYNEEDPILTVLRKYEAS*CGLKGC
Trigger: ACACCCCTTCAGTCCACACAAAGAAGCTTCATATTT...TCTAAGTACTGTCAGGATGGGGTCTTCCTCATTGTAGGGCGTTAGGATGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp TTCCTCCCGAGTAAAGGACCCACAGTTTCTAAGCATGTCTACAAATaGGACTCCGATGAGACCATCTACATTCAGGATAAGATTTGGCTT +
Preference number: 5 (lower is better)
Translates to: FLPSKGPTVSKHVYK*DSDETIYIQDKIWL
Trigger: AAGCCAAATCTTATCCTGAATGTAGATGGTCTCATCGGAGTCGCATTTGTAGACATGCTTAGAAACTGTGGGTCCTTTACTCGGGAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000588779.1
ENST00000590151.5
CDS-3UTR CAA 90 bp ACAGAACATTTCAGTGGGATACCAAACAAGCCCTTAACACGTAACATACAAAAATGCTCTGAAATTGCCTaGGCCGACATGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: TEHFSGIPNKPLTRNIQKCSEIA*ADMAAE
Trigger: CTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCA...TTTTTGTATGTTACGTGTTAAGGGCTTGTTTGGTATCCCACTGAAATGTTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCA +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTASIPPV*PILKHP
Trigger: TGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCT...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAACTCGCATGTCTGGGTaGTTTATCGACTTCACTCGG +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTATRMSG*FIDFTR
Trigger: CCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS GCA 90 bp ATCTTGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAACATATGAAATATCATCCCACGGAT +
Preference number: 5 (lower is better)
Translates to: ILSSVYCSRVPGSVT*SCVPEEHMKYHPTD
Trigger: ATCCGTGGGATGATATTTCATATGTTCTTCCGGAACACATGAGCATGTAACAGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000588779.1
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGTCCGAGAGATGATATaGTTGAGCTCGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTAVREMI*LSSLDM
Trigger: CATGTCCAACGAGCTCAACAATATCATCTCTCGGAC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCAGGTACAATGACTCCATaGGCCACGAGATCTTCGTAT +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTAGTMTP*ATRSSY
Trigger: ATACGAAGATCTCGTGGCCAATGGAGTCATTGTACC...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTGCAGTCTGTACACTTTTTCTaGGGGGAAGAGATCTTGTCT +
Preference number: 5 (lower is better)
Translates to: AVCTLFLGGRDLVFSLLQSVHFF*GEEILS
Trigger: AGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGA...CTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTAAATATGAAGCTTCTTaGTGTGGACTGAAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: ASCLYTFSWGKRSCLQFTKYEAS*CGLKGC
Trigger: ACACCCCTTCAGTCCACACAAAGAAGCTTCATATTT...AGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS-3UTR CAA 90 bp GAGGAAGACCCCATCCTGACAGTACTTAGATGCTTCCATATAATAAATACAGCATTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGT +
Preference number: 5 (lower is better)
Translates to: EEDPILTVLRCFHIINTALGEEI*SSVYCS
Trigger: ACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAA...TGCTGTATTTATTATATGGAAGCATCTAAGTACTGTCAGGATGGGGTCTTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000537919.5
ENST00000590151.5
CDS TCA 90 bp CTAACCAAAGCACAATATAAGGACATAGAAATGACCGGCCCTGTGTaGGACTATATAAACTGTTTCAAATATTTACTGTCCTTTCCCACT +
Preference number: 5 (lower is better)
Translates to: LTKAQYKDIEMTGPV*DYINCFKYLLSFPT
Trigger: AGTGGGAAAGGACAGTAAATATTTGAAACAGTTTATATAGTCTCACACAGGGCCGGTCATTTCTATGTCCTTATATTGTGCTTTGGTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CCA 72 bp AGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTGGCTaGTTGGGGATGGGCCGGTGGCCCAGGGCCATGCCC +
Preference number: 6 (lower is better)
Translates to: RRKFAVWAAVGG*LGMGRWPRAMP
Trigger: GGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CAA 90 bp GCGTTGAGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACAATGGCCGTC +
Preference number: 6 (lower is better)
Translates to: ALRRKFAVWAAVGGW*GMGRWPRAMPTMAV
Trigger: GACGGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CAA 72 bp AGGAAGTTTGCAGTGTGGGCCGCTGTGGGTGGCTGGTaGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACA +
Preference number: 6 (lower is better)
Translates to: RKFAVWAAVGGW*GMGRWPRAMPT
Trigger: TGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS TCA 72 bp TGCTGGGGGCTGGCGTCGATGTGCTCCCGCTGGCGTTaGGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTG +
Preference number: 6 (lower is better)
Translates to: CWGLASMCSRWR*GGSLQCGPLWV
Trigger: CACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCACATCGACGCCAGCCCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 72 bp GTTGAGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGTaGCTGGTTGGGGATGGGCCGGTGGCCCAGGGCCAT +
Preference number: 6 (lower is better)
Translates to: VEEEVCSVGRCG*LVGDGPVAQGH
Trigger: ATGGCCCTGGGCCACCGGCCCATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CAA 72 bp CTGCTGGGGGCTGGCGTCGATGTGCTCCCGCTGGCGTaGAGGAGGAAGTTTGCAGTGTGGGCCGCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: LLGAGVDVLPLA*RRKFAVWAAVG
Trigger: ACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCACATCGACGCCAGCCCCCAGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS CCA 72 bp GGATCAAACCAAGCTCCCTGGCCCAGGAGTAGTCCATaGGCACGGTTGGGGGCGGCACCTCCTGGGCAGGTA +
Preference number: 6 (lower is better)
Translates to: GSNQAPWPRSSP*ARLGAAPPGQV
Trigger: TACCTGCCCAGGAGGTGCCGCCCCCAACCGTGCCCATGGACTACTCCTGGGCCAGGGAGCTTGGTTTGATCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp CGTCGATGTGCTCCCGCTGGCGTTGAGGAGGAAGTTTaGAGTGTGGGCCGCTGTGGGTGGCTGGTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: RRCAPAGVEEEV*SVGRCGWLVGD
Trigger: ATCCCCAACCAGCCACCCACAGCGGCCCACACTGCAAACTTCCTCCTCAACGCCAGCGGGAGCACATCGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS GCA 72 bp AGGCGCCACCTCATCGGCCCTGGACTCAGAAAAAGATaGTGTCCTGCTGGGGGCTGGCGTCGATGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: RRHLIGPGLRKR*CPAGGWRRCAP
Trigger: GGGAGCACATCGACGCCAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp CGCTGTACACGACAGAGGCGCCACCCCCGGCCACCATaGTCCAGATCCTCCCTTTGGGGTTCAGCAAGGTCA +
Preference number: 6 (lower is better)
Translates to: RCTRQRRHPRPP*SRSSLWGSARS
Trigger: TGACCTTGCTGAACCCCAAAGGGAGGATCTGGACCATGGTGGCCGGGGGTGGCGCCTCTGTCGTGTACAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS TCA 72 bp GGCTGGAGACCAGGTCTTTCCCAGCTCGCGCACAAATaGTGGTGTTGTGGGCTCCAGAGACGGCTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: GWRPGLSQLAHK*WCCGLQRRLAR
Trigger: ACGGGCCAGCCGTCTCTGGAGCCCACAACACCATCATTTGTGCGCGAGCTGGGAAAGACCTGGTCTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp ACTACCAAGTTCTGGCTGAGCAGCCAGGGGTGGTCCTaGAGCAAGCGGGCCCAGTCTGTGTCAGGAGTGACC +
Preference number: 6 (lower is better)
Translates to: TTKFWLSSQGWS*SKRAQSVSGVT
Trigger: GGTCACTCCTGACACAGACTGGGCCCGCTTGCTGCAGGACCACCCCTGGCTGCTCAGCCAGAACTTGGTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CCA 72 bp TGGGGATGGGCCGGTGGCCCAGGGCCATGCCCACAATaGCCGTCATGTGAGTCTCTGTGCCAAAGACATGGA +
Preference number: 6 (lower is better)
Translates to: WGWAGGPGPCPQ*PSCESLCQRHG
Trigger: TCCATGTCTTTGGCACAGAGACTCACATGACGGCCATTGTGGGCATGGCCCTGGGCCACCGGCCCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS TCA 72 bp CGGTGGCCCAGGGCCATGCCCACAATGGCCGTCATGTaGGTCTCTGTGCCAAAGACATGGATGGGGATCCCA +
Preference number: 6 (lower is better)
Translates to: RWPRAMPTMAVM*VSVPKTWMGIP
Trigger: TGGGATCCCCATCCATGTCTTTGGCACAGAGACTCACATGACGGCCATTGTGGGCATGGCCCTGGGCCACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS GCA 72 bp GCTCGTCTCGGGAGCAGACATAGTCAAAGTCCAGCATaGCTTGCACGGCCCGGGTCTGCATGCCCCACACAA +
Preference number: 6 (lower is better)
Translates to: ARLGSRHSQSPA*LARPGSACPTQ
Trigger: TTGTGTGGGGCATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACTATGTCTGCTCCCGAGACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp GCTTGGCCTTCTTTGCAGGCGCCACCTCATCGGCCCTaGACTCAGAAAAAGATGCTGTCCTGCTGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: AWPSLQAPPHRP*TQKKMLSCWGL
Trigger: CAGCCCCCAGCAGGACAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp GTGGCTTCCTGTCCCAGCCGTGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGGTTGACCCCAACGAGA +
Preference number: 6 (lower is better)
Translates to: VASCPSRGFSQD*TPSRVRLTPTR
Trigger: TCTCGTTGGGGTCAACCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CAA 72 bp GTCTCGGGAGCAGACATAGTCAAAGTCCAGCATGCCTaGCACGGCCCGGGTCTGCATGCCCCACACAATGGC +
Preference number: 6 (lower is better)
Translates to: VSGADIVKVQHA*HGPGLHAPHNG
Trigger: GCCATTGTGTGGGGCATGCAGACCCGGGCCGTGCAAGGCATGCTGGACTTTGACTATGTCTGCTCCCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp GGCATAGTCATAGGTCTGCTGCTCGCTGGGGGCGCCTaGGTACTCCCCATAGTTTGCCAGCTCGTTGACACC +
Preference number: 6 (lower is better)
Translates to: GIVIGLLLAGGA*VLPIVCQLVDT
Trigger: GGTGTCAACGAGCTGGCAAACTATGGGGAGTACTCAGGCGCCCCCAGCGAGCAGCAGACCTATGACTATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000588547.1
ENST00000590151.5
ENST00000590770.5
CDS TCA 72 bp TCTGCATGCCCCACACAATGGCCTTGGTGTGGCGGCTaGAGAGGGTGGTGCTCTTTCCTTGTGGCATGGCAG +
Preference number: 6 (lower is better)
Translates to: SACPTQWPWCGG*RGWCSFLVAWQ
Trigger: CTGCCATGCCACAAGGAAAGAGCACCACCCTCTTCAGCCGCCACACCAAGGCCATTGTGTGGGGCATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS GCA 72 bp TGGACATGCCTCCGGAACGTGAGACATAGGCCACGCTaGCTGGGCGGTACAGTTTGGAGGCCAGGATGTTGT +
Preference number: 6 (lower is better)
Translates to: WTCLRNVRHRPR*LGGTVWRPGCC
Trigger: ACAACATCCTGGCCTCCAAACTGTACCGCCCAGGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp TTGGACTTGGGACTGAATCTTGTGGCATGGCAGGCTTaGCCTTCTTTGCAGGCGCCACCTCATCGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: LDLGLNLVAWQA*PSLQAPPHRPW
Trigger: CCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAGTCCCAAGTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS CCA 72 bp CAGCATGGCCAAACTGGACCTCAGAGGAGAACATGGTaGCACACGTCCCGATGCACCAGCAGACGATGGGCT +
Preference number: 6 (lower is better)
Translates to: QHGQTGPQRRTW*HTSRCTSRRWA
Trigger: AGCCCATCGTCTGCTGGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp CTCCAGCATGGCCAAACTGGACCTCAGAGGAGAACATaGTGGCACACGTCCCGATGCACCAGCAGACGATGG +
Preference number: 6 (lower is better)
Translates to: LQHGQTGPQRRT*WHTSRCTSRRW
Trigger: CCATCGTCTGCTGGTGCATCGGGACGTGTGCCACCATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp CTTGGACTTGGGACTGAATCTTGTGGCATGGCAGGCTaGGCCTTCTTTGCAGGCGCCACCTCATCGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LGLGTESCGMAG*AFFAGATSSAL
Trigger: CAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAGTCCCAAGTCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS CAA 90 bp GTCCCGATGCACCAGCAGACGATGGGCTTAGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTATATTCCTCAGTGCCCCCAATCTCT +
Preference number: 6 (lower is better)
Translates to: VPMHQQTMGLVRRPS*MPRQILYSSVPPIS
Trigger: AGAGATTGGGGGCACTGAGGAATATAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCACTAAGCCCATCGTCTGCTGGTGCATCGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp GGCACGGTTGGGGGCGGCACCTCCTGGGCAGGTACAATGACTCCATaGGCCACGAGATCTTCGTATACAGACTGGATGATCTCTCCAAGC +
Preference number: 6 (lower is better)
Translates to: GTVGGGTSWAGTMTP*ATRSSYTDWMISPS
Trigger: GCTTGGAGAGATCATCCAGTCTGTATACGAAGATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCCAACCGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp AGAGGGTGGTGCTCTTTCCTTGTGGCATGGCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGGCCCTGGACTCAGAAAAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: RGWCSFLVAWQAWPS*QAPPHRPWTQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCACCACCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS CAA 90 bp ACGATGCCTGTGGCTTCCTGTCCCAGCCGTGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGGTTGACCCCAACGAGACCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: TMPVASCPSRGFSQD*TPSRVRLTPTRPSF
Trigger: AAAACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAAGCCACAGGCATCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537919.5
CDS TCA 72 bp GTGGTCCCCAGTGAAAGGGTAGACCATGGCAGCCACTaGGGGCTCGTCTCGGGAGCAGACATAGTCAAAGTC +
Preference number: 6 (lower is better)
Translates to: VVPSERVDHGSH*GLVSGADIVKV
Trigger: GACTTTGACTATGTCTGCTCCCGAGACGAGCCCTCAGTGGCTGCCATGGTCTACCCTTTCACTGGGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp GCACGGTTGGGGGCGGCACCTCCTGGGCAGGTACAATaGCTCCATTGGCCACGAGATCTTCGTATACAGACT +
Preference number: 6 (lower is better)
Translates to: ARLGAAPPGQVQ*LHWPRDLRIQT
Trigger: AGTCTGTATACGAAGATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCCAACCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp GACTGTGGGGGACGAAGGGCTCGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGCCAACCTCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: DCGGRRARSESS*GSLWPCQPLPK
Trigger: CTTCGGCAGAGGTTGGCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCGAGCCCTTCGTCCCCCACAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590735.1
CDS TCA 72 bp GGGCGCCTGAGTACTCCCCATAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGATGGTATCGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GRLSTPHSLPAR*HPLDHRWYRSA
Trigger: GGCAGAGCGATACCATCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTACTCAGGCGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590770.5
CDS GCA 72 bp CAGCTTCAGGCTTGCCCCACTTTTGGCATCGAGGTCTaGAATGTAGGCTTCCTCTGGATATGCCTCCCGCCC +
Preference number: 6 (lower is better)
Translates to: QLQACPTFGIEV*NVGFLWICLPP
Trigger: GGGCGGGAGGCATATCCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS GCA 72 bp GCTCTTTCCTTGTGGCATGGCAGGCTTGGCCTTCTTTaGAGGCGCCACCTCATCGGCCCTGGACTCAGAAAA +
Preference number: 6 (lower is better)
Translates to: ALSLWHGRLGLL*RRHLIGPGLRK
Trigger: TTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS CCA 72 bp CCAACAGTGGCAGGTCCGATGATGGTCACTCCCTTCTaGTCCGCCTTCTTGATCAGCTTTCTCGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PTVAGPMMVTPF*SAFLISFLVRA
Trigger: GGCCCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCATCATCGGACCTGCCACTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp GGACTGAATCTTGTGGCATGGCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGGCCCTGGACTCAGAAA +
Preference number: 6 (lower is better)
Translates to: GLNLVAWQAWPS*QAPPHRPWTQK
Trigger: TTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS CAA 72 bp CACCAGCAGACGATGGGCTTAGTGAGGCGGCCCTCCTaGATGCCCCGGCAAATCTTATATTCCTCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: HQQTMGLVRRPS*MPRQILYSSVP
Trigger: GGGCACTGAGGAATATAAGATTTGCCGGGGCATCAAGGAGGGCCGCCTCACTAAGCCCATCGTCTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp TGCTCTTTCCTTGTGGCATGGCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGGCCCTGGACTCAGAAA +
Preference number: 6 (lower is better)
Translates to: CSFLVAWQAWPS*QAPPHRPWTQK
Trigger: TTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGGAAAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
CDS CAA 90 bp TTGCCAACTGTGGCTTCCTGTCCCAGCCGTGGCTTCAGCCAGGACTaGACCCCATCCAGAGTGAGGTTGACCCCAACGAGACCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: LPTVASCPSRGFSQD*TPSRVRLTPTRPSF
Trigger: AAAACTTGGTCTCGTTGGGGTCAACCTCACTCTGGATGGGGTCAAGTCCTGGCTGAAGCCACGGCTGGGACAGGAAGCCACAGTTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000592970.1
CDS CAA 90 bp ACAGTGGCAGGTCCGATGATGGTCACTCCCTTCTGGTCCGCCTTCTaGATCAGCTTTCTCGTGAGGGCCTCAGGGATGCCTTCAGCTATG +
Preference number: 6 (lower is better)
Translates to: TVAGPMMVTPFWSAF*ISFLVRASGMPSAM
Trigger: CATAGCTGAAGGCATCCCTGAGGCCCTCACGAGAAAGCTGATCAAGAAGGCGGACCAGAAGGGAGTGACCATCATCGGACCTGCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp GACTGTGGGGGACGAAGGGCTCGATCAGAAAGTTCTTaGGGAAGCCTGTGGCCTTGCCAACTGTGGCTTCCT +
Preference number: 6 (lower is better)
Translates to: DCGGRRARSESS*GSLWPCQLWLP
Trigger: AGGAAGCCACAGTTGGCAAGGCCACAGGCTTCCTCAAGAACTTTCTGATCGAGCCCTTCGTCCCCCACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS GCA 72 bp TTCGTGCTCCTTCAGGGGGCCCTGGTAATCTCGAATTaGTCTCACGATGCCCTTGAACGTGGCAGCCACGTT +
Preference number: 6 (lower is better)
Translates to: FVLLQGALVISN*SHDALERGSHV
Trigger: AACGTGGCTGCCACGTTCAAGGGCATCGTGAGAGCAATTCGAGATTACCAGGGCCCCCTGAAGGAGCACGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590770.5
CDS GCA 72 bp GCTTCAGGTGGGAGAGTTATAGTTCAGCGTAGCAGCTaGTTGCCCAGAGACACACAGCGCAGATGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: ASGGRVIVQRSS*LPRDTQRRWAA
Trigger: AGCTGCCCATCTGCGCTGTGTGTCTCTGGGCAAGCAGCTGCTACGCTGAACTATAACTCTCCCACCTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CCA 72 bp CCTCGTGGTGGAACAGGACGTAGTCCCCTTCTCGGGTaGCATAGATGCAGACATAGAACTCCTCAGCCTGAC +
Preference number: 6 (lower is better)
Translates to: PRGGTGRSPLLG*HRCRHRTPQPD
Trigger: GTCAGGCTGAGGAGTTCTATGTCTGCATCTATGCCACCCGAGAAGGGGACTACGTCCTGTTCCACCACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590735.1
CDS CCA 72 bp CGCACAAATGATGGTGTTGTGGGCTCCAGAGACGGCTaGCCCGTGATCAGCTGTCACCATCAGACACATCTC +
Preference number: 6 (lower is better)
Translates to: RTNDGVVGSRDG*PVISCHHQTHL
Trigger: GAGATGTGTCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCCCACAACACCATCATTTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp CTGTCCCAGTGTCTTCTCCACCCCTTTAAGAGACCCTaGGGCAAGAGCTCCCTACCTGACCTGGGAACTCAT +
Preference number: 6 (lower is better)
Translates to: LSQCLLHPFKRP*GKSSLPDLGTH
Trigger: ATGAGTTCCCAGGTCAGGTAGGGAGCTCTTGCCCCAGGGTCTCTTAAAGGGGTGGAGAAGACACTGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CAA 72 bp CGGGCCCAGTCTGTGTCAGGAGTGACCCGAGCATACTaGAACCGATTCTGGATGGCTGAGGTGGTACAGATG +
Preference number: 6 (lower is better)
Translates to: RAQSVSGVTRAY*NRFWMAEVVQM
Trigger: CATCTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCACTCCTGACACAGACTGGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CAA 72 bp GGGGGCGGCACCTCCTGGGCAGGTACAATGACTCCATaGGCCACGAGATCTTCGTATACAGACTGGATGATC +
Preference number: 6 (lower is better)
Translates to: GGGTSWAGTMTP*ATRSSYTDWMI
Trigger: GATCATCCAGTCTGTATACGAAGATCTCGTGGCCAATGGAGTCATTGTACCTGCCCAGGAGGTGCCGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp TTGGACTTGGGACTGAATCTTGTGGCATGGCAGGCTTGGCCTTCTTaGCAGGCGCCACCTCATCGGCCCTGGACTCAGAAAAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: LDLGLNLVAWQAWPS*QAPPHRPWTQKKML
Trigger: CAGCATCTTTTTCTGAGTCCAGGGCCGATGAGGTGGCGCCTGCAAAGAAGGCCAAGCCTGCCATGCCACAAGATTCAGTCCCAAGTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000352035.7
ENST00000590151.5
CDS TCA 72 bp GGGCGCCTGAGTACTCCCCATAGTTTGCCAGCTCGTTaGCACCCCCTAGATCACAGATGGTATCGCTGTACA +
Preference number: 6 (lower is better)
Translates to: GRLSTPHSLPAR*HPLDHRWYRCT
Trigger: TGTACAGCGATACCATCTGTGATCTAGGGGGTGTCAACGAGCTGGCAAACTATGGGGAGTACTCAGGCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS TCA 72 bp CCTGATAGTTGGGGCCACCTCTTCGGACAAAGATTGTaGCTTCGTGCTCCTTCAGGGGGCCCTGGTAATCTC +
Preference number: 6 (lower is better)
Translates to: PDSWGHLFGQRL*LRAPSGGPGNL
Trigger: GAGATTACCAGGGCCCCCTGAAGGAGCACGAAGTCACAATCTTTGTCCGAAGAGGTGGCCCCAACTATCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000590770.5
CDS TCA 72 bp GATATTGTTGAGCTCGTTGGACATGCCTCCGGAACGTaGGACATAGGCCACGCTGCCTGGGCGGTACAGTTT +
Preference number: 6 (lower is better)
Translates to: DIVELVGHASGT*DIGHAAWAVQF
Trigger: AAACTGTACCGCCCAGGCAGCGTGGCCTATGTCTCACGTTCCGGAGGCATGTCCAACGAGCTCAACAATATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp CTCCTGGAGTGTCCTGATAGCGTAACACATGATCCATaGATGTGGAGCCCGGGTACCTGTCCCCACCAATGG +
Preference number: 6 (lower is better)
Translates to: LLECPDSVTHDP*MWSPGTCPHQW
Trigger: CCATTGGTGGGGACAGGTACCCGGGCTCCACATTCATGGATCATGTGTTACGCTATCAGGACACTCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp TGTCACCCCACTTCACTTTGCAGATGTAGTCGGCAGTaGCGTCCACCTTGGCCGCCAAGTCAAGGACATAGA +
Preference number: 6 (lower is better)
Translates to: CHPTSLCRCSRQ*RPPWPPSQGHR
Trigger: TCTATGTCCTTGACTTGGCGGCCAAGGTGGACGCCACTGCCGACTACATCTGCAAAGTGAAGTGGGGTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590735.1
CDS CCA 72 bp GCAGTTTCAGAAGCCTGGTTGGCACAAGCTCCAGCATaGCCAAACTGGACCTCAGAGGAGAACATGGTGGCA +
Preference number: 6 (lower is better)
Translates to: AVSEAWLAQAPA*PNWTSEENMVA
Trigger: TGCCACCATGTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp CCCTACCTGACCTGGGAACTCATGGTAACTTGGCTCTaGCTCAAACTCTGCTTTCAAGGCCCCTTCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PYLTWELMVTWL*LKLCFQGPFPA
Trigger: AGCAGGGAAGGGGCCTTGAAAGCAGAGTTTGAGCCAGAGCCAAGTTACCATGAGTTCCCAGGTCAGGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CAA 72 bp GCCTGGTTCTTGGCTACTGCAGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGGCCAAACTGGACCTCA +
Preference number: 6 (lower is better)
Translates to: AWFLATAVSEAW*AQAPAWPNWTS
Trigger: TGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp AAGCTCCGGGGCACAAACACTCCTGCTTCCTTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAAGCCTGGTTGGCACAAGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: KLRGTNTPASFKAWF*ATAVSEAWLAQAPA
Trigger: TGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCCCGGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp CCTCCGGATGCTTCCTCATGGCATCAGCCATGTTCTTaGAGACAGGGATCAGGATCTCTTTGTGCCCCCAGT +
Preference number: 6 (lower is better)
Translates to: PPDASSWHQPCS*RQGSGSLCAPS
Trigger: ACTGGGGGCACAAAGAGATCCTGATCCCTGTCTTCAAGAACATGGCTGATGCCATGAGGAAGCATCCGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp ATGATGGTGTTGTGGGCTCCAGAGACGGCTGGCCCGTaGTCAGCTGTCACCATCAGACACATCTCAATGAAC +
Preference number: 6 (lower is better)
Translates to: MMVLWAPETAGP*SAVTIRHISMN
Trigger: GTTCATTGAGATGTGTCTGATGGTGACAGCTGATCACGGGCCAGCCGTCTCTGGAGCCCACAACACCATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp GATGCCCTTGAACGTGGCAGCCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGATGAGGATCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: DALERGSHVGEV*DAASNDEDLAI
Trigger: GATGGCAAGATCCTCATCATTGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
ENST00000590770.5
CDS CCA 72 bp GGTTCAGCAAGGTCAGCTTCAGGCTTGCCCCACTTTTaGCATCGAGGTCTGCAATGTAGGCTTCCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GSARSASGLPHF*HRGLQCRLPLD
Trigger: ATCCAGAGGAAGCCTACATTGCAGACCTCGATGCCAAAAGTGGGGCAAGCCTGAAGCTGACCTTGCTGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000590151.5
CDS CCA 72 bp AAAGCCTGGTTCTTGGCTACTGCAGTTTCAGAAGCCTaGTTGGCACAAGCTCCAGCATGGCCAAACTGGACC +
Preference number: 6 (lower is better)
Translates to: KAWFLATAVSEA*LAQAPAWPNWT
Trigger: GGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp TTAAGAGACCCTGGGGCAAGAGCTCCCTACCTGACCTaGGAACTCATGGTAACTTGGCTCTGGCTCAAACTC +
Preference number: 6 (lower is better)
Translates to: LRDPGARAPYLT*ELMVTWLWLKL
Trigger: GAGTTTGAGCCAGAGCCAAGTTACCATGAGTTCCCAGGTCAGGTAGGGAGCTCTTGCCCCAGGGTCTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CAA 72 bp ATCCCACCTGTGTTGCCAATCTTAAAGCACCCAGGCTaGATGCCTCCAACAGTGGCAGGTCCGATGATGGTC +
Preference number: 6 (lower is better)
Translates to: IPPVLPILKHPG*MPPTVAGPMMV
Trigger: GACCATCATCGGACCTGCCACTGTTGGAGGCATCAAGCCTGGGTGCTTTAAGATTGGCAACACAGGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp TTGGAGGCCAGGATGTTGTCCAGCATCCCACCTGTGTaGCCAATCTTAAAGCACCCAGGCTTGATGCCTCCA +
Preference number: 6 (lower is better)
Translates to: LEARMLSSIPPV*PILKHPGLMPP
Trigger: TGGAGGCATCAAGCCTGGGTGCTTTAAGATTGGCAACACAGGTGGGATGCTGGACAACATCCTGGCCTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp TCCAGAGTGAGGTTGACCCCAACGAGACCAAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTGACTACCAAGTTCTGGCTGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SRVRLTPTRPSFPRR*ISWSGLTTKFWLSS
Trigger: GCTGCTCAGCCAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACTTGGTCTCGTTGGGGTCAACCTCACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CAA 90 bp TCCTTCAAAGCCTGGTTCTTGGCTACTGCAGTTTCAGAAGCCTGGTaGGCACAAGCTCCAGCATGGCCAAACTGGACCTCAGAGGAGAAC +
Preference number: 6 (lower is better)
Translates to: SFKAWFLATAVSEAW*AQAPAWPNWTSEEN
Trigger: GTTCTCCTCTGAGGTCCAGTTTGGCCATGCTGGAGCTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp TCCAAGCTCATCAAAGCTCCGGGGCACAAACACTCCTaGTTCCTTCAAAGCCTGGTTCTTGGCTACTGCAGT +
Preference number: 6 (lower is better)
Translates to: SKLIKAPGHKHS*FLQSLVLGYCS
Trigger: ACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCCCCGGAGCTTTGATGAGCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp TCCCCAAACCACTTTCCCCAGAAACTGCACCACTGTTaGAACTGTTACCTTGAACGTGGCAGCCACGTTGGT +
Preference number: 6 (lower is better)
Translates to: SPNHFPQKLHHC*NCYLERGSHVG
Trigger: ACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACAGTGGTGCAGTTTCTGGGGAAAGTGGTTTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CCA 72 bp GCAACCTCTGGGTATCACCTGAGATGGCCAAGTGTTTaGCTGCCTAGAAGGTGGTGTCCTGAATCACATGCA +
Preference number: 6 (lower is better)
Translates to: ATSGYHLRWPSV*LPRRWCPESHA
Trigger: TGCATGTGATTCAGGACACCACCTTCTAGGCAGCCAAACACTTGGCCATCTCAGGTGATACCCAGAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CAA 72 bp ACTTGTAAAGGAGTTCTTTGCCCGTCTGCTCTGAAATaGCCTTGGCCGACATGGCTGCAGAGAGACCTGCTC +
Preference number: 6 (lower is better)
Translates to: TCKGVLCPSALK*PWPTWLQRDLL
Trigger: GAGCAGGTCTCTCTGCAGCCATGTCGGCCAAGGCAATTTCAGAGCAGACGGGCAAAGAACTCCTTTACAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CAA 72 bp GGGATAATGCCACTGTCAAAGGCTTTACTGAACATCTaGGCTGCTGCATCCAAGGCACCCCCAAACCGATCC +
Preference number: 6 (lower is better)
Translates to: GIMPLSKALLNI*AAASKAPPNRS
Trigger: GGATCGGTTTGGGGGTGCCTTGGATGCAGCAGCCAAGATGTTCAGTAAAGCCTTTGACAGTGGCATTATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 90 bp CAAACCACTTTCCCCAGAAACTGCACCACTGTTGCAACTGTTACCTaGAACGTGGCAGCCACGTTGGTGAAGTTTGCGATGCTGCCTCCA +
Preference number: 6 (lower is better)
Translates to: QTTFPRNCTTVATVT*NVAATLVKFAMLPP
Trigger: TGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACAGTGGTGCAGTTTCTGGGGAAAGTGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CAA 90 bp AACTGCACCACTGTTGCAACTGTTACCTTGAACGTGGCAGCCACGTaGGTGAAGTTTGCGATGCTGCCTCCAATGATGAGGATCTTGCCA +
Preference number: 6 (lower is better)
Translates to: NCTTVATVTLNVAAT*VKFAMLPPMMRILP
Trigger: TGGCAAGATCCTCATCATTGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACAGTGGTGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS TCA 72 bp CGCATGTCTGGGTTGTTTATCTTCCCTGCTTGGTTCTaGGCTGGTCCTTGCTCATCAAGCAACCTCTGGGTA +
Preference number: 6 (lower is better)
Translates to: RMSGLFIFPAWF*AGPCSSSNLWV
Trigger: TACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS GCA 72 bp TGGCTTCTTCGAGGTGGTAATCTTCTCTACTTCCAGTaGATAATCGAGCAGAGGAGTGGCAGGGAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: WLLRGGNLLYFQ*IIEQRSGREVL
Trigger: CAGCACTTCCCTGCCACTCCTCTGCTCGATTATGCACTGGAAGTAGAGAAGATTACCACCTCGAAGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000588779.1
ENST00000590151.5
CDS GCA 72 bp TGTTACCTTGAACGTGGCAGCCACGTTGGTGAAGTTTaGGATGCTGCCTCCAATGATGAGGATCTTGCCATC +
Preference number: 6 (lower is better)
Translates to: CYLERGSHVGEV*DAASNDEDLAI
Trigger: GATGGCAAGATCCTCATCATTGGAGGCAGCATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CCA 72 bp GCACAAACACTCCTGCTTCCTTCAAAGCCTGGTTCTTaGCTACTGCAGTTTCAGAAGCCTGGTTGGCACAAG +
Preference number: 6 (lower is better)
Translates to: AQTLLLPSKPGS*LLQFQKPGWHK
Trigger: CTTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp GTCTGGGTTGTTTATCTTCCCTGCTTGGTTCTGAGCTaGTCCTTGCTCATCAAGCAACCTCTGGGTATCACC +
Preference number: 6 (lower is better)
Translates to: VWVVYLPCLVLS*SLLIKQPLGIT
Trigger: GGTGATACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CAA 72 bp AGGTTGACCCCAACGAGACCAAGTTTTCCACGACGTTaGATCAGCTGGTCTGGCTTGACTACCAAGTTCTGG +
Preference number: 6 (lower is better)
Translates to: RLTPTRPSFPRR*ISWSGLTTKFW
Trigger: CCAGAACTTGGTAGTCAAGCCAGACCAGCTGATCAAACGTCGTGGAAAACTTGGTCTCGTTGGGGTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS CAA 72 bp GGCACAAACACTCCTGCTTCCTTCAAAGCCTGGTTCTaGGCTACTGCAGTTTCAGAAGCCTGGTTGGCACAA +
Preference number: 6 (lower is better)
Translates to: GTNTPASFKAWF*ATAVSEAWLAQ
Trigger: TTGTGCCAACCAGGCTTCTGAAACTGCAGTAGCCAAGAACCAGGCTTTGAAGGAAGCAGGAGTGTTTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CAA 72 bp CTGCACTCGCATGTCTGGGTTGTTTATCTTCCCTGCTaGGTTCTGAGCTGGTCCTTGCTCATCAAGCAACCT +
Preference number: 6 (lower is better)
Translates to: LHSHVWVVYLPC*VLSWSLLIKQP
Trigger: AGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CAA 72 bp TTCCCCAGAAACTGCACCACTGTTGCAACTGTTACCTaGAACGTGGCAGCCACGTTGGTGAAGTTTGCGATG +
Preference number: 6 (lower is better)
Translates to: FPRNCTTVATVT*NVAATLVKFAM
Trigger: CATCGCAAACTTCACCAACGTGGCTGCCACGTTCAAGGTAACAGTTGCAACAGTGGTGCAGTTTCTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588547.1
CDS CAA 90 bp TTTGAGGATCTGCACTCGCATGTCTGGGTTGTTTATCTTCCCTGCTaGGTTCTGAGCTGGTCCTTGCTCATCAAGCAACCTCTGGGTATC +
Preference number: 6 (lower is better)
Translates to: FEDLHSHVWVVYLPC*VLSWSLLIKQPLGI
Trigger: GATACCCAGAGGTTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGATCCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CAA 90 bp CTCATCCCTATTCGGAACTTTGCCTCCAACCCTCTTCCTGTTTTCTaGGCTGTCTTACAAGGGAGCCTTTTCAGGCAGCAACTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: LIPIRNFASNPLPVF*AVLQGSLFRQQLQR
Trigger: TCTCTGGAGTTGCTGCCTGAAAAGGCTCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAATAGGGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS CAA 90 bp AGACCTGCTCTACCTGTCACGTATGCCTCATCCCTATTCGGAACTTaGCCTCCAACCCTCTTCCTGTTTTCTTGGCTGTCTTACAAGGGA +
Preference number: 6 (lower is better)
Translates to: RPALPVTYASSLFGT*PPTLFLFSWLSYKG
Trigger: TCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAATAGGGATGAGGCATACGTGACAGGTAGAGCAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS TCA 72 bp ACTCGCATGTCTGGGTTGTTTATCGACTTCACTCGGTaGCCAATGCCCATGATCAGCTTCCCTTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: TRMSGLFIDFTR*PMPMISFPSFF
Trigger: GAAGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACCGAGTGAAGTCGATAAACAACCCAGACATGCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp GATCTGCACTCGCATGTCTGGGTTGTTTATCTTCCCTaGTTGGTTCTGAGCTGGTCCTTGCTCATCAAGCAA +
Preference number: 6 (lower is better)
Translates to: DLHSHVWVVYLP*LVLSWSLLIKQ
Trigger: TTGCTTGATGAGCAAGGACCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CCA 72 bp CCTGACGTAATCTTTGAGGATCTGCACTCGCATGTCTaGGTTGTTTATCGACTTCACTCGGTGACCAATGCC +
Preference number: 6 (lower is better)
Translates to: PDVIFEDLHSHV*VVYRLHSVTNA
Trigger: GGCATTGGTCACCGAGTGAAGTCGATAAACAACCCAGACATGCGAGTGCAGATCCTCAAAGATTACGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS CCA 72 bp CCTGACGTAATCTTTGAGGATCTGCACTCGCATGTCTaGGTTGTTTATCTTCCCTGCTTGGTTCTGAGCTGG +
Preference number: 6 (lower is better)
Translates to: PDVIFEDLHSHV*VVYLPCLVLSW
Trigger: CCAGCTCAGAACCAAGCAGGGAAGATAAACAACCCAGACATGCGAGTGCAGATCCTCAAAGATTACGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1
CDS CCA 72 bp TTCGGAACTTTGCCTCCAACCCTCTTCCTGTTTTCTTaGCTGTCTTACAAGGGAGCCTTTTCAGGCAGCAAC +
Preference number: 6 (lower is better)
Translates to: FGTLPPTLFLFS*LSYKGAFSGSN
Trigger: GTTGCTGCCTGAAAAGGCTCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS CAA 90 bp CTCCACTGCCAGCTGTCTGTACACTTTTTCTTGGGGGAAGAGATCTaGTCTTCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTTACATGC +
Preference number: 6 (lower is better)
Translates to: LHCQLSVHFFLGEEI*SSVYCSRVPGSVTC
Trigger: GCATGTAACAGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAAGTGTACAGACAGCTGGCAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp AGAGAGGCAAAGTTGATGAGCACATCTACCTCCGGATaGTTCCTCATGGCATCAGCCATGTTCTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: REAKLMSTSTSG*FLMASAMFLKT
Trigger: TGTCTTCAAGAACATGGCTGATGCCATGAGGAAGCATCCGGAGGTAGATGTGCTCATCAACTTTGCCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp TACCTGTCACGTATGCCTCATCCCTATTCGGAACTTTaGCTCCAACCCTCTTCCTGTTTTCTTGGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: YLSRMPHPYSEL*LQPSSCFLGCL
Trigger: AAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAATAGGGATGAGGCATACGTGACAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS CAA 72 bp ATTCGGAACTTTGCCTCCAACCCTCTTCCTGTTTTCTaGGCTGTCTTACAAGGGAGCCTTTTCAGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: IRNFASNPLPVF*AVLQGSLFRQQ
Trigger: TTGCTGCCTGAAAAGGCTCCCTTGTAAGACAGCCAAGAAAACAGGAAGAGGGTTGGAGGCAAAGTTCCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592970.1
CDS CAA 72 bp CCAATGCCCATGATCAGCTTCCCTTCCTTCTTCATCTaGTTCACAAACTCCATGGGGATAATGCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: PMPMISFPSFFI*FTNSMGIMPLS
Trigger: TGACAGTGGCATTATCCCCATGGAGTTTGTGAACAAGATGAAGAAGGAAGGGAAGCTGATCATGGGCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS TCA 72 bp AGTGACCCGAGCATACTTGAACCGATTCTGGATGGCTaGGGTGGTACAGATGAACTTGTAAAGGAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SDPSILEPILDG*GGTDELVKEFF
Trigger: AAAGAACTCCTTTACAAGTTCATCTGTACCACCTCAGCCATCCAGAATCGGTTCAAGTATGCTCGGGTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
ENST00000592970.1
CDS TCA 72 bp GGTTGTTTATCGACTTCACTCGGTGACCAATGCCCATaGTCAGCTTCCCTTCCTTCTTCATCTTGTTCACAA +
Preference number: 6 (lower is better)
Translates to: GCLSTSLGDQCP*SASLPSSSCSQ
Trigger: TTGTGAACAAGATGAAGAAGGAAGGGAAGCTGATCATGGGCATTGGTCACCGAGTGAAGTCGATAAACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp TTTTTCTTGGGGGAAGAGATCTTGTCTTCAGTTTACTaGAGTAGGGTTCCTGGCTCTGTTACATGCTCATGT +
Preference number: 6 (lower is better)
Translates to: FFLGEEILSSVY*SRVPGSVTCSC
Trigger: ACATGAGCATGTAACAGAGCCAGGAACCCTACTGCAGTAAACTGAAGACAAGATCTCTTCCCCCAAGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000590151.5
CDS GCA 72 bp TCAGTTTACTGCAGTAGGGTTCCTGGCTCTGTTACATaGTCATGTGTTCCGGAAGAACATATGAAATATCAT +
Preference number: 6 (lower is better)
Translates to: SVYCSRVPGSVT*SCVPEEHMKYH
Trigger: ATGATATTTCATATGTTCTTCCGGAACACATGAGCATGTAACAGAGCCAGGAACCCTACTGCAGTAAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352035.7
ENST00000353196.5
ENST00000393896.6
ENST00000537919.5
ENST00000588779.1
ENST00000590151.5
CDS TCA 72 bp GCACAATATAAGGACATAGAAATGACCGGCCCTGTGTaGGACTATATAAACTGTTTCAAATATTTACTGTCC +
Preference number: 6 (lower is better)
Translates to: AQYKDIEMTGPV*DYINCFKYLLS
Trigger: GGACAGTAAATATTTGAAACAGTTTATATAGTCTCACACAGGGCCGGTCATTTCTATGTCCTTATATTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588779.1