Pregenerated sensors for ACKR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000213088Ensembl transcript IDs: ENST00000368121.6, ENST00000368122.4, ENST00000435307.2, ENST00000537147.5
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CATCCTTCAGGGAGGGGCAGAGAGGGCAAGAGGGTGCGGGTGGCCTaGTGGCAGAATAGGGCGAGGAGCAGGGGCGTAGCCACACAGTGC | + |
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Preference number: 5 (lower is better) Translates to: HPSGRGREGKRVRVA*WQNRARSRGVATQC Trigger: GCACTGTGTGGCTACGCCCCTGCTCCTCGCCCTATTCTGCCACCAGGCCACCCGCACCCTCTTGCCCTCTCTGCCCCTCCCTGAAGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | AGGCCTGGGACCTGGCCTGCACCCAGTCTGTGGCCCAGGGAGGCATaGCACCCTAGCAGCAAAGCCTGGGCAAAGGCTGAGCCATACCAG | + |
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Preference number: 5 (lower is better) Translates to: RPGTWPAPSLWPREA*HPSSKAWAKAEPYQ Trigger: CTGGTATGGCTCAGCCTTTGCCCAGGCTTTGCTGCTAGGGTGCCATGCCTCCCTGGGCCACAGACTGGGTGCAGGCCAGGTCCCAGGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | CTGAGCCATACCAGACACAGTAGCCCAGGCTACACAGGGCAGAGCTaGGAGTGCTACCTAGCCCTGGGGCCAAGACGGGCACCACAATGC | + |
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Preference number: 5 (lower is better) Translates to: LSHTRHSSPGYTGQS*ECYLALGPRRAPQC Trigger: GCATTGTGGTGCCCGTCTTGGCCCCAGGGCTAGGTAGCACTCGCAGCTCTGCCCTGTGTAGCCTGGGCTACTGTGTCTGGTATGGCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | GCCTGGTGGCAGAATAGGGCGAGGAGCAGGGGCGTAGCCACACAGTaGAAAATTGCCAGGGCTTCTGCCAGGTTCAGCAGCAGGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: AWWQNRARSRGVATQ*KIARASARFSSRSR Trigger: TCTGGACCTGCTGCTGAACCTGGCAGAAGCCCTGGCAATTTTGCACTGTGTGGCTACGCCCCTGCTCCTCGCCCTATTCTGCCACCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | AGTTCCCCATGGCACCGTTTGGTTCAGGCCCGCAGACAGAAGGGCTaGGACGGCTGTCAGCGCCTGTGCTTCCAAGATAAGAGCCAAGGA | + |
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Preference number: 5 (lower is better) Translates to: SSPWHRLVQARRQKG*DGCQRLCFQDKSQG Trigger: TCCTTGGCTCTTATCTTGGAAGCACAGGCGCTGACAGCCGTCCCAGCCCTTCTGTCTGCGGGCCTGAACCAAACGGTGCCATGGGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000537147.5 |
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| CDS CCA 90 bp | ATTGCCAGGGCTTCTGCCAGGTTCAGCAGCAGGTCCAGAGCCTGCTaGGCCAGACATGTTGACAACAGCAACAGCTTGGACCTCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: IARASARFSSRSRAC*ARHVDNSNSLDLTR Trigger: CCTGGTGAGGTCCAAGCTGTTGCTGTTGTCAACATGTCTGGCCCAGCAGGCTCTGGACCTGCTGCTGAACCTGGCAGAAGCCCTGGCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS TCA 90 bp | TGTATATCAGGGTGCAGAGTCCACCAGAAGCACCACTGGCCAGGGTaGCAGGCAGTGTCAGTAGGGCAGCCACTCCCCAAATTCCCACAG | + |
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Preference number: 5 (lower is better) Translates to: CISGCRVHQKHHWPG*QAVSVGQPLPKFPQ Trigger: CTGTGGGAATTTGGGGAGTGGCTGCCCTACTGACACTGCCTGTCACCCTGGCCAGTGGTGCTTCTGGTGGACTCTGCACCCTGATATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | GGTCCAGAGCCTGCTGGGCCAGACATGTTGACAACAGCAACAGCTTaGACCTCACCAGGAAATCCAGTCCTAGAACCACCCCATGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GPEPAGPDMLTTATA*TSPGNPVLEPPHEA Trigger: GGCCTCATGGGGTGGTTCTAGGACTGGATTTCCTGGTGAGGTCCAAGCTGTTGCTGTTGTCAACATGTCTGGCCCAGCAGGCTCTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | TGCTTCCAAGATAAGAGCCAAGGACTAATGAGGGCCATCAGGTTCTaGGCAGGGACAGGGGGCATCAGGAAGCCTTACCCCACGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: CFQDKSQGLMRAIRF*AGTGGIRKPYPTPT Trigger: AGTGGGCGTGGGGTAAGGCTTCCTGATGCCCCCTGTCCCTGCCCAGAACCTGATGGCCCTCATTAGTCCTTGGCTCTTATCTTGGAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS GCA 90 bp | CAAGACAGGCTACAGTGTGTGTGGCCTGCAAAGCCTTCAGCTCCGTaGTGTATATCAGGGTGCAGAGTCCACCAGAAGCACCACTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QDRLQCVWPAKPSAP*CISGCRVHQKHHWP Trigger: TGGCCAGTGGTGCTTCTGGTGGACTCTGCACCCTGATATACAGCACGGAGCTGAAGGCTTTGCAGGCCACACACACTGTAGCCTGTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | AAAATTGCCAGGGCTTCTGCCAGGTTCAGCAGCAGGTCCAGAGCCTaGTGGGCCAGACATGTTGACAACAGCAACAGCTTGGACCTCACC | + |
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Preference number: 5 (lower is better) Translates to: KIARASARFSSRSRA*WARHVDNSNSLDLT Trigger: GGTGAGGTCCAAGCTGTTGCTGTTGTCAACATGTCTGGCCCAGCAGGCTCTGGACCTGCTGCTGAACCTGGCAGAAGCCCTGGCAATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | GAGAGGAAGGTCGGGTGGGAGAACAAGGTCTCTGCAGGAGTCAGATaGAGTGCGGACAGTGGAAAAGGACAAAGCAGGGAGCCTGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: ERKVGWENKVSAGVR*SADSGKGQSREPEE Trigger: CTCTTCAGGCTCCCTGCTTTGTCCTTTTCCACTGTCCGCACTGCATCTGACTCCTGCAGAGACCTTGTTCTCCCACCCGACCTTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435307.2 |
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| CDS TCA 90 bp | GGCAGAGATAAGGGAGGTGCTGGGAAATTGGAGTGGAAGGGCGGCTaGCTCTCACTGCTCCTCCATCCCCTTGAACTGGATCCAAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: GRDKGGAGKLEWKGG*LSLLLHPLELDPRK Trigger: TTTCCTTGGATCCAGTTCAAGGGGATGGAGGAGCAGTGAGAGTCAGCCGCCCTTCCACTCCAATTTCCCAGCACCTCCCTTATCTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS GCA 90 bp | CAGTGCAGAGTCATCCAGCAGGTTACAGGAGTGGCAGGGGGCAGCTaGTTCCAGGTTGGCACCATAGTCTCCATCTGGGAAGGAATCATT | + |
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Preference number: 5 (lower is better) Translates to: QCRVIQQVTGVAGGS*FQVGTIVSIWEGII Trigger: AATGATTCCTTCCCAGATGGAGACTATGGTGCCAACCTGGAAGCAGCTGCCCCCTGCCACTCCTGTAACCTGCTGGATGACTCTGCACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | GGCAACAAGACAAAGATGGCAAGACAGGCTACAGTGTGTGTGGCCTaGAAAGCCTTCAGCTCCGTGCTGTATATCAGGGTGCAGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GNKTKMARQATVCVA*KAFSSVLYIRVQSP Trigger: TGGACTCTGCACCCTGATATACAGCACGGAGCTGAAGGCTTTGCAGGCCACACACACTGTAGCCTGTCTTGCCATCTTTGTCTTGTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | CCAATGGCAACAAGACAAAGATGGCAAGACAGGCTACAGTGTGTGTaGCCTGCAAAGCCTTCAGCTCCGTGCTGTATATCAGGGTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: PMATRQRWQDRLQCV*PAKPSAPCCISGCR Trigger: TCTGCACCCTGATATACAGCACGGAGCTGAAGGCTTTGCAGGCCACACACACTGTAGCCTGTCTTGCCATCTTTGTCTTGTTGCCATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS TCA 90 bp | AACAGCTTGGACCTCACCAGGAAATCCAGTCCTAGAACCACCCCATaGGGCCACCAGAAAATAAACCAGGCCCACAGGATATTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: NSLDLTRKSSPRTTP*GHQKINQAHRIFIQ Trigger: CTGGATGAATATCCTGTGGGCCTGGTTTATTTTCTGGTGGCCTCATGGGGTGGTTCTAGGACTGGATTTCCTGGTGAGGTCCAAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | GTGGCAGGGGGCAGCTGCTTCCAGGTTGGCACCATAGTCTCCATCTaGGAAGGAATCATTCACACCATAGGAAGAATTCCATACATCTTC | + |
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Preference number: 5 (lower is better) Translates to: VAGGSCFQVGTIVSI*EGIIHTIGRIPYIF Trigger: GAAGATGTATGGAATTCTTCCTATGGTGTGAATGATTCCTTCCCAGATGGAGACTATGGTGCCAACCTGGAAGCAGCTGCCCCCTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 90 bp | CATACCCAATGCCTTCTTCAGCCCCTTGGCTCCAAACAAACCCAATaGCAACAAGACAAAGATGGCAAGACAGGCTACAGTGTGTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: HTQCLLQPLGSKQTQ*QQDKDGKTGYSVCG Trigger: GCCACACACACTGTAGCCTGTCTTGCCATCTTTGTCTTGTTGCCATTGGGTTTGTTTGGAGCCAAGGGGCTGAAGAAGGCATTGGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 90 bp | CACGTGGGCGTGAGCTCTTTGTGTGTACTGAACTCTGTGTACGTTTaGTGTGTATCATTGTGCACATATCTGTATGTGAGGGGCTTGGCG | + |
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Preference number: 5 (lower is better) Translates to: HVGVSSLCVLNSVYV*CVSLCTYLYVRGLA Trigger: CGCCAAGCCCCTCACATACAGATATGTGCACAATGATACACAGCAAACGTACACAGAGTTCAGTACACACAAAGAGCTCACGCCCACGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS CCA 72 bp | AGGGGGAGAGCTCCGCCCTGTGCAGACAGTTCCCCATaGCACCGTTTGGTTCAGGCCCGCAGACAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: RGRAPPCADSSP*HRLVQARRQKG Trigger: GCCCTTCTGTCTGCGGGCCTGAACCAAACGGTGCCATGGGGAACTGTCTGCACAGGGCGGAGCTCTCCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000368122.4 ENST00000537147.5 |
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| CDS GCA 72 bp | CACAGTAGCCCAGGCTACACAGGGCAGAGCTGCGAGTaGTACCTAGCCCTGGGGCCAAGACGGGCACCACAA | + |
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Preference number: 6 (lower is better) Translates to: HSSPGYTGQSCE*YLALGPRRAPQ Trigger: TTGTGGTGCCCGTCTTGGCCCCAGGGCTAGGTAGCACTCGCAGCTCTGCCCTGTGTAGCCTGGGCTACTGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 72 bp | ACCAGACACAGTAGCCCAGGCTACACAGGGCAGAGCTaGGAGTGCTACCTAGCCCTGGGGCCAAGACGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TRHSSPGYTGQS*ECYLALGPRRA Trigger: TGCCCGTCTTGGCCCCAGGGCTAGGTAGCACTCGCAGCTCTGCCCTGTGTAGCCTGGGCTACTGTGTCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS TCA 72 bp | GGGTGCAGAGTCCACCAGAAGCACCACTGGCCAGGGTaGCAGGCAGTGTCAGTAGGGCAGCCACTCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GCRVHQKHHWPG*QAVSVGQPLPK Trigger: TTTGGGGAGTGGCTGCCCTACTGACACTGCCTGTCACCCTGGCCAGTGGTGCTTCTGGTGGACTCTGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 72 bp | TGGCACCGTTTGGTTCAGGCCCGCAGACAGAAGGGCTaGGACGGCTGTCAGCGCCTGTGCTTCCAAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: WHRLVQARRQKG*DGCQRLCFQDK Trigger: CTTATCTTGGAAGCACAGGCGCTGACAGCCGTCCCAGCCCTTCTGTCTGCGGGCCTGAACCAAACGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000537147.5 |
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| CDS CCA 72 bp | ACACCGGAAGAGTCTCCCTGTGCAGACAGTTCCCCATaGCACCGTTTGGTTCAGGCCCGCAGACAGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: TPEESPCADSSP*HRLVQARRQKG Trigger: GCCCTTCTGTCTGCGGGCCTGAACCAAACGGTGCCATGGGGAACTGTCTGCACAGGGAGACTCTTCCGGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368121.6 |
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| CDS CAA 90 bp | CGCCCACTGCCTGCACAAGCCTCAGGCCTATGGGGGTCACTGGCCTaGGGTCTTCCTGTTTTGAGGTTGGATTTGGCTGGTTGGGACTAC | + |
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Preference number: 6 (lower is better) Translates to: RPLPAQASGLWGSLA*GLPVLRLDLAGWDY Trigger: GTAGTCCCAACCAGCCAAATCCAACCTCAAAACAGGAAGACCCAAGGCCAGTGACCCCCATAGGCCTGAGGCTTGTGCAGGCAGTGGGCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS TCA 72 bp | TGGGAGAAAGGTGGTGGTGGTCAACTCTGTCCCAACTaGGGGGTGTGTGCACGTGGGCGTGAGCTCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: WEKGGGGQLCPN*GVCARGRELFV Trigger: CACAAAGAGCTCACGCCCACGTGCACACACCCCTCAGTTGGGACAGAGTTGACCACCACCACCTTTCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS GCA 72 bp | GTCATCCAGCAGGTTACAGGAGTGGCAGGGGGCAGCTaGTTCCAGGTTGGCACCATAGTCTCCATCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: VIQQVTGVAGGS*FQVGTIVSIWE Trigger: TTCCCAGATGGAGACTATGGTGCCAACCTGGAAGCAGCTGCCCCCTGCCACTCCTGTAACCTGCTGGATGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 72 bp | AGGGCTTCTGCCAGGTTCAGCAGCAGGTCCAGAGCCTaGTGGGCCAGACATGTTGACAACAGCAACAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: RASARFSSRSRA*WARHVDNSNSL Trigger: CAAGCTGTTGCTGTTGTCAACATGTCTGGCCCAGCAGGCTCTGGACCTGCTGCTGAACCTGGCAGAAGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS TCA 72 bp | AAGGGAGGTGCTGGGAAATTGGAGTGGAAGGGCGGCTaGCTCTCACTGCTCCTCCATCCCCTTGAACTGGAT | + |
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Preference number: 6 (lower is better) Translates to: KGGAGKLEWKGG*LSLLLHPLELD Trigger: ATCCAGTTCAAGGGGATGGAGGAGCAGTGAGAGTCAGCCGCCCTTCCACTCCAATTTCCCAGCACCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS GCA 72 bp | GTCGGGTGGGAGAACAAGGTCTCTGCAGGAGTCAGATaGAGTGCGGACAGTGGAAAAGGACAAAGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VGWENKVSAGVR*SADSGKGQSRE Trigger: CTCCCTGCTTTGTCCTTTTCCACTGTCCGCACTGCATCTGACTCCTGCAGAGACCTTGTTCTCCCACCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435307.2 |
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| CDS GCA 72 bp | CTACAGTGTGTGTGGCCTGCAAAGCCTTCAGCTCCGTaGTGTATATCAGGGTGCAGAGTCCACCAGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LQCVWPAKPSAP*CISGCRVHQKH Trigger: GTGCTTCTGGTGGACTCTGCACCCTGATATACAGCACGGAGCTGAAGGCTTTGCAGGCCACACACACTGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 72 bp | CCTGCTGGGCCAGACATGTTGACAACAGCAACAGCTTaGACCTCACCAGGAAATCCAGTCCTAGAACCACCC | + |
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Preference number: 6 (lower is better) Translates to: PAGPDMLTTATA*TSPGNPVLEPP Trigger: GGGTGGTTCTAGGACTGGATTTCCTGGTGAGGTCCAAGCTGTTGCTGTTGTCAACATGTCTGGCCCAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CAA 72 bp | GGGCCTGGCCCCATACCCAATGCCTTCTTCAGCCCCTaGGCTCCAAACAAACCCAATGGCAACAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: GPGPIPNAFFSP*APNKPNGNKTK Trigger: CTTTGTCTTGTTGCCATTGGGTTTGTTTGGAGCCAAGGGGCTGAAGAAGGCATTGGGTATGGGGCCAGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CCA 72 bp | GGCCTGGCCCCATACCCAATGCCTTCTTCAGCCCCTTaGCTCCAAACAAACCCAATGGCAACAAGACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GLAPYPMPSSAP*LQTNPMATRQR Trigger: TCTTTGTCTTGTTGCCATTGGGTTTGTTTGGAGCCAAGGGGCTGAAGAAGGCATTGGGTATGGGGCCAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CAA 72 bp | ATACATCTTCGAAGTCCAGCTGACTTGAGTTCTCAGTaGAGGGGGAGAGCTCCGCCTGGAGGACATACCCAG | + |
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Preference number: 6 (lower is better) Translates to: IHLRSPADLSSQ*RGRAPPGGHTQ Trigger: CTGGGTATGTCCTCCAGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368121.6 ENST00000435307.2 |
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| CDS CAA 72 bp | ATACATCTTCGAAGTCCAGCTGACTTGAGTTCTCAGTaGAGGGGGAGAGCTCCGCCCTGTGCAGACAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: IHLRSPADLSSQ*RGRAPPCADSS Trigger: GGAACTGTCTGCACAGGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368122.4 ENST00000537147.5 |
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| CDS CAA 90 bp | AAGAATTCCATACATCTTCGAAGTCCAGCTGACTTGAGTTCTCAGTaGAGGGGGAGAGCTCCGCCTGGAGGACATACCCAGAGGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: KNSIHLRSPADLSSQ*RGRAPPGGHTQRRP Trigger: TGGCCTCCTCTGGGTATGTCCTCCAGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTATGGAATTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368121.6 ENST00000435307.2 |
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| CDS CAA 90 bp | CAAGCCTCAGGCCTATGGGGGTCACTGGCCTTGGGTCTTCCTGTTTaGAGGTTGGATTTGGCTGGTTGGGACTACACTCAGGAAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: QASGLWGSLALGLPV*RLDLAGWDYTQEKG Trigger: ACCTTTTTCCTGAGTGTAGTCCCAACCAGCCAAATCCAACCTCAAAACAGGAAGACCCAAGGCCAGTGACCCCCATAGGCCTGAGGCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS TCA 72 bp | GACCTCACCAGGAAATCCAGTCCTAGAACCACCCCATaGGGCCACCAGAAAATAAACCAGGCCCACAGGATA | + |
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Preference number: 6 (lower is better) Translates to: DLTRKSSPRTTP*GHQKINQAHRI Trigger: TATCCTGTGGGCCTGGTTTATTTTCTGGTGGCCTCATGGGGTGGTTCTAGGACTGGATTTCCTGGTGAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS CAA 90 bp | TCACACCATAGGAAGAATTCCATACATCTTCGAAGTCCAGCTGACTaGAGTTCTCAGTTGAGGGGGAGAGCTCCGCCTGGAGGACATACC | + |
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Preference number: 6 (lower is better) Translates to: SHHRKNSIHLRSPAD*SSQLRGRAPPGGHT Trigger: GGTATGTCCTCCAGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTATGGAATTCTTCCTATGGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368121.6 ENST00000435307.2 |
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| CDS CAA 90 bp | TCACACCATAGGAAGAATTCCATACATCTTCGAAGTCCAGCTGACTaGAGTTCTCAGTTGAGGGGGAGAGCTCCGCCCTGTGCAGACAGT | + |
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Preference number: 6 (lower is better) Translates to: SHHRKNSIHLRSPAD*SSQLRGRAPPCADS Trigger: ACTGTCTGCACAGGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTATGGAATTCTTCCTATGGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368122.4 ENST00000537147.5 |
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| CDS CAA 72 bp | AGGAAGAATTCCATACATCTTCGAAGTCCAGCTGACTaGAGTTCTCAGTTGAGGGGGAGAGCTCCGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: RKNSIHLRSPAD*SSQLRGRAPPG Trigger: TCCAGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTATGGAATTCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368121.6 ENST00000435307.2 |
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| CDS CAA 72 bp | AGGAAGAATTCCATACATCTTCGAAGTCCAGCTGACTaGAGTTCTCAGTTGAGGGGGAGAGCTCCGCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RKNSIHLRSPAD*SSQLRGRAPPC Trigger: ACAGGGCGGAGCTCTCCCCCTCAACTGAGAACTCAAGTCAGCTGGACTTCGAAGATGTATGGAATTCTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000368122.4 ENST00000537147.5 |
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| CDS CAA 72 bp | TCACTGGCCTTGGGTCTTCCTGTTTTGAGGTTGGATTaGGCTGGTTGGGACTACACTCAGGAAAAAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLALGLPVLRLD*AGWDYTQEKGG Trigger: CCCACCTTTTTCCTGAGTGTAGTCCCAACCAGCCAAATCCAACCTCAAAACAGGAAGACCCAAGGCCAGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS CAA 90 bp | GCACGTGGGCGTGAGCTCTTTGTGTGTACTGAACTCTGTGTACGTTaGCTGTGTATCATTGTGCACATATCTGTATGTGAGGGGCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: ARGRELFVCTELCVR*LCIIVHISVCEGLG Trigger: GCCAAGCCCCTCACATACAGATATGTGCACAATGATACACAGCAAACGTACACAGAGTTCAGTACACACAAAGAGCTCACGCCCACGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS CCA 72 bp | ACAAGACAAAGATGGCAAGACAGGCTACAGTGTGTGTaGCCTGCAAAGCCTTCAGCTCCGTGCTGTATATCA | + |
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Preference number: 6 (lower is better) Translates to: TRQRWQDRLQCV*PAKPSAPCCIS Trigger: TGATATACAGCACGGAGCTGAAGGCTTTGCAGGCCACACACACTGTAGCCTGTCTTGCCATCTTTGTCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000368121.6 ENST00000368122.4 ENST00000435307.2 ENST00000537147.5 |
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| CDS GCA 72 bp | GTACTGAACTCTGTGTACGTTTGCTGTGTATCATTGTaGACATATCTGTATGTGAGGGGCTTGGCGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VLNSVYVCCVSL*TYLYVRGLAGV Trigger: GACACCCGCCAAGCCCCTCACATACAGATATGTGCACAATGATACACAGCAAACGTACACAGAGTTCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS CAA 72 bp | TGTGTACTGAACTCTGTGTACGTTTGCTGTGTATCATaGTGCACATATCTGTATGTGAGGGGCTTGGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: CVLNSVYVCCVS*CTYLYVRGLAG Trigger: ACCCGCCAAGCCCCTCACATACAGATATGTGCACAATGATACACAGCAAACGTACACAGAGTTCAGTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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| CDS CAA 72 bp | CGTGAGCTCTTTGTGTGTACTGAACTCTGTGTACGTTaGCTGTGTATCATTGTGCACATATCTGTATGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RELFVCTELCVR*LCIIVHISVCE Trigger: CTCACATACAGATATGTGCACAATGATACACAGCAAACGTACACAGAGTTCAGTACACACAAAGAGCTCACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000537147.5 |
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