RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACHE (Homo sapiens)

Ensembl gene IDs: ENSG00000087085

Ensembl transcript IDs: ENST00000241069.11, ENST00000302913.8, ENST00000411582.4, ENST00000412389.5, ENST00000419336.6, ENST00000426415.5, ENST00000428317.7, ENST00000430554.1, ENST00000440755.5, ENST00000441605.2, ENST00000442452.1, ENST00000445236.3, ENST00000454485.5, ENST00000651875.1

Found 706 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTaGGGCCAGGGCGCCCAGCGAGGCGGGAGGGGAGGACGGCACGAG +
Preference number: 1 (lower is better)
Translates to: VELGLPLALRLVERV*GQGAQRGGRGGRHE
Trigger: CTCGTGCCGTCCTCCCCTCCCGCCTCGCTGGGCGCCCTGGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR GCA 90 bp TGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGCCCACCGTGGCCCAGGGTCCATTGG +
Preference number: 1 (lower is better)
Translates to: CRLEDSPQGGPAAWP*DGPLPCPPWPRVHW
Trigger: CCAATGGACCCTGGGCCACGGTGGGCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR GCA 90 bp TTCCCACCAGTGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCCTCTCCCATGCCCACCGTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: FPPVPPGGQPTRWAS*VALRRASPMPTVAQ
Trigger: CTGGGCCACGGTGGGCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 90 bp GCAGCCAGTCGCCCAGCCAGCTGGGCCACGGGGCACACGACATTGTaGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGGG +
Preference number: 1 (lower is better)
Translates to: AASRPASWATGHTTL*SPTTSLRASLRRAG
Trigger: CCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACTGGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR GCA 90 bp GACATTGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAGCCAGTCTGCAGGCCGTGGAAGTCT +
Preference number: 1 (lower is better)
Translates to: DIVVAHHIAQGLPQA*RVLGMQPVCRPWKS
Trigger: AGACTTCCACGGCCTGCAGACTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR TCA 90 bp CCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCA +
Preference number: 1 (lower is better)
Translates to: PGGAEDMGVPPGSQV*AAILLAVVVELVLP
Trigger: TGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CCA 90 bp TCCCCGGCAGGGCCAGGAAGCCAAAGGCTCCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCTCGGCCTGTACCAAGAAGCGGCCAT +
Preference number: 1 (lower is better)
Translates to: SPAGPGSQRLPPGSS*TPAQSSRPVPRSGH
Trigger: ATGGCCGCTTCTTGGTACAGGCCGAGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGGGAGCCTTTGGCTTCCTGGCCCTGCCGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR GCA 90 bp CATGGGGGTCCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGC +
Preference number: 1 (lower is better)
Translates to: HGGPAGVTGLSSDPA*CSGRTGSSSAPCRS
Trigger: GCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGGACCCCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CCA 90 bp GCCAGTCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 1 (lower is better)
Translates to: ASLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTaGCAAGAGGATCAGGAGAATGTGCGAAAGACGAGAGGGAGGATG +
Preference number: 1 (lower is better)
Translates to: CREDARRNAGDHVGR*QEDQENVRKTRGRM
Trigger: CATCCTCCCTCTCGTCTTTCGCACATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CCA 90 bp TTCTTGAGGCAGCACGTGCCATTCGTGGTTCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGCTACCAGCTCTGTGTCATTCCCACC +
Preference number: 1 (lower is better)
Translates to: FLRQHVPFVVHQDLR*SCPKAGYQLCVIPT
Trigger: GGTGGGAATGACACAGAGCTGGTAGCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCTGCCTCAAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 90 bp GGTATGAGTGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTaGGACGGTGGCAAGAGGATCAGGAGAATGTGCGAAAGACGAGAG +
Preference number: 1 (lower is better)
Translates to: GMSAGRTHGEMQATT*DGGKRIRRMCERRE
Trigger: CTCTCGTCTTTCGCACATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCACTCATACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR TCA 90 bp TCTCCATCTACCACAGGCACGAAGGAGAACCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCGTGGTTCACCAGGACCTGCGCTGGT +
Preference number: 1 (lower is better)
Translates to: SPSTTGTKENRKTLS*GSTCHSWFTRTCAG
Trigger: ACCAGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCTTCGTGCCTGTGGTAGATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 2 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 2 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR-3UTR GCA 90 bp CCCACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGGGTCCTCGGGATGCAGCCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 2 (lower is better)
Translates to: PTTSLRASLRRAGSSGCSPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...GCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 2 (lower is better)
Translates to: GAPAVELGLPLALRLVERAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CAA 90 bp TGGGCAGCCAGTCGCCCAGCCAGCTGGGCCACGGGGCACACGACATaGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTGCC +
Preference number: 2 (lower is better)
Translates to: WAASRPASWATGHTT*WSPTTSLRASLRRA
Trigger: GGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACTGGCTGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp AGTGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTGCGTGGCCCTGCGACGGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 2 (lower is better)
Translates to: SAAWRTAHKVGQLRGPATAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...CGTCGCAGGGCCACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp GCCACGGGGCACACGACATTGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 2 (lower is better)
Translates to: ATGHTTLWSPTTSLRASLGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...GAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp TCATTCCCACCAGTGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTGCGTGTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: SFPPVPPGGQPTRWASCVCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...CACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp CTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAACACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: LGLPLALRLVERVGGAEQHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...TTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 2 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
3UTR-3UTR GCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 2 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR-3UTR TCA 90 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGATCAGGAGAGACGAGAGGGAGGATaGGGGCAGAGGCGGGGCCGG +
Preference number: 2 (lower is better)
Translates to: DARRNAGDHVGRWQEDQERREGG*GQRRGR
Trigger: CCGGCCCCGCCTCTGCCCTCATCCTCCCTCTCGTCT...CTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR TCA 90 bp CTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAACCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 2 (lower is better)
Translates to: LGLPLALRLVERVGGAEQPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...TTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp GCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 2 (lower is better)
Translates to: AGRTHGEMQATTWDGGKRAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...CCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp GGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 2 (lower is better)
Translates to: GGAEQFGEEAVPEGAGLGNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR-3UTR CCA 90 bp GGCACCCCCATCCACAGGGGCCAGGAGAGCGTGGAAGCACGGTGTTCAAAGACGAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 2 (lower is better)
Translates to: GTPIHRGQESVEARCSKTSRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...CGTCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCCTGTGGATGGGGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR TCA 90 bp ACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGGGTCCTCGGGATGCAGCCAGATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 2 (lower is better)
Translates to: TTSLRASLRRAGSSGCSQMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...CTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 2 (lower is better)
Translates to: GAPAVELGLPLALRLVERHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 2 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR-3UTR CCA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCGCTGTAACAGTTTATTaGCAGCCCAGAGGGGCGAAG +
Preference number: 2 (lower is better)
Translates to: RWNSAFHWRSASSSVSAAAVTVY*QPRGAK
Trigger: CTTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGC...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTCAAACAACAAAGGCGTaGGGGTCCCTGAGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: GAPAVELGLPLALRLVERQTTKA*GSLRRV
Trigger: CACCCTTCTCAGGGACCCCCACGCCTTTGTTGTTTG...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGACCAGTCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 2 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRPVCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGACTGG...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR TCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCTGCCCTGTCCAGTGTaGGTCTCTCGGTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELLPCPV*VSRFEE
Trigger: CTCCTCAAACCGAGAGACTCACACTGGACAGGGCAG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR TCA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGCTGCCCTGTCCAGTGTaGGTCTCTCGGTTTGAGGAG +
Preference number: 2 (lower is better)
Translates to: CREDARRNAGDHVGRWQELPCPV*VSRFEE
Trigger: CTCCTCAAACCGAGAGACTCACACTGGACAGGGCAG...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp AGGAGAACCGGAAGACGCTTTCTTGAGGCAGCACGTGCCATTCGTGGTTCACCAGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 2 (lower is better)
Translates to: RRTGRRFLEAARAIRGSPGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...TGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCTGTAACAGTTTATTaGCAGCCCAGAGGGGCGAAG +
Preference number: 2 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRAVTVY*QPRGAK
Trigger: CTTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR GCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTACGGCCCCCTCCTCCTaGCCTGTCCAGTGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLTAPSS*PVQCES
Trigger: AGACTCACACTGGACAGGGCAGGAGGAGGGGGCCGT...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTATGCAGGCGACCACGTaGGACGGTGGCAAGAGGATC +
Preference number: 2 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTMQATT*DGGKRI
Trigger: GATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCAT...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CAA 90 bp GTCTCCATCTACCACAGGCACGAAGGAGAACCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTCGTGGTTCACCAGGACCTGCGCTGG +
Preference number: 2 (lower is better)
Translates to: VSIYHRHEGEPEDAF*RQHVPFVVHQDLRW
Trigger: CCAGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCTTCGTGCCTGTGGTAGATGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR TCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 2 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR TCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 2 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR TCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR-3UTR GCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAACGGCCCCCTCCTCCTaGCCTGTCCAGTGTGAGTCT +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPTAPSS*PVQCES
Trigger: AGACTCACACTGGACAGGGCAGGAGGAGGGGGCCGT...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR GCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAGGACGCACGGAGAAATaGAGGCGACCACGTGGGACG +
Preference number: 2 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGGRTEK*RRPRGT
Trigger: CGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCC...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGATCTGAGATCCCTGAGTaGGGCCCTTCCCCACGGTCC +
Preference number: 2 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGSEIPE*GPSPRS
Trigger: GGACCGTGGGGAAGGGCCCCACTCAGGGATCTCAGA...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTATCTGAGATCCCTGAGTaGGGCCCTTCCCCACGGTCC +
Preference number: 2 (lower is better)
Translates to: AAILLAVVVELVLPVHHVSEIPE*GPSPRS
Trigger: GGACCGTGGGGAAGGGCCCCACTCAGGGATCTCAGA...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 2 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCACCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR GCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 2 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR GCA 72 bp GTGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCCTCTCCCATGCCCACC +
Preference number: 3 (lower is better)
Translates to: VPPGGQPTRWAS*VALRRASPMPT
Trigger: GGTGGGCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 72 bp AATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTaGGCGCGCAGCCCCCGCCGCACCTCCAGCGGCCGC +
Preference number: 3 (lower is better)
Translates to: NLGRKRFQKAQA*ARSPRRTSSGR
Trigger: GCGGCCGCTGGAGGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR GCA 72 bp GTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAGCCAGTCTGCAGGCCG +
Preference number: 3 (lower is better)
Translates to: VAHHIAQGLPQA*RVLGMQPVCRP
Trigger: CGGCCTGCAGACTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR GCA 72 bp ACTGCAGGGCCAGCCTCTGATCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCCCCGGCAGGGCCAGGA +
Preference number: 3 (lower is better)
Translates to: TAGPASDPGDPH*PGPLGSPAGPG
Trigger: TCCTGGCCCTGCCGGGGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 72 bp CGCCCAGCCAGCTGGGCCACGGGGCACACGACATTGTaGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGG +
Preference number: 3 (lower is better)
Translates to: RPASWATGHTTL*SPTTSLRASLR
Trigger: CCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CAA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 3 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CAA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
3UTR CCA 72 bp CAGCACGTGCCATTCGTGGTTCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGCTACCAGCTCTGTGTC +
Preference number: 3 (lower is better)
Translates to: QHVPFVVHQDLR*SCPKAGYQLCV
Trigger: GACACAGAGCTGGTAGCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR-3UTR CAA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 3 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR GCA 72 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCA +
Preference number: 3 (lower is better)
Translates to: PAGVTGLSSDPA*CSGRTGSSSAP
Trigger: TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CCA 72 bp GCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTaGGACGGTGGCAAGAGGATCAGGAGAATGTGCGAA +
Preference number: 3 (lower is better)
Translates to: AGRTHGEMQATT*DGGKRIRRMCE
Trigger: TTCGCACATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CCA 72 bp CAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGG +
Preference number: 3 (lower is better)
Translates to: QAVEVSRVDEGL*GVTEEVSIYHR
Trigger: CCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR TCA 72 bp ACCACAGGCACGAAGGAGAACCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCGTGGTTCACCAGGACC +
Preference number: 3 (lower is better)
Translates to: TTGTKENRKTLS*GSTCHSWFTRT
Trigger: GGTCCTGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCTTCGTGCCTGTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
3UTR CCA 72 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTaGCAAGAGGATCAGGAGAATGTGCGAAAGACGAGA +
Preference number: 3 (lower is better)
Translates to: DARRNAGDHVGR*QEDQENVRKTR
Trigger: TCTCGTCTTTCGCACATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CAA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGGCTGTAACAGTTTATaGGCAGCCCAGAGGGGCGAA +
Preference number: 3 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVGCNSL*AAQRGE
Trigger: TTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGCC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR-3UTR CAA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTATATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 3 (lower is better)
Translates to: AAILLAVVVELVLPVHHVYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp TTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGRKRFQKAQAWARSPRRGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...GCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp GGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCTCCAACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: GSGSRRRRPGRAAPAAPPTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...TGGAGGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCGGGGGCCTCATGGCTaGAGGGCAGGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPRGPHG*RAGGVC
Trigger: GCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000411582.4
ENST00000412389.5
CDS-3UTR CCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTSRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCAGGGCGCCCAGCGAGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LPLALRLVERVCGQGAQRGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...TCGCTGGGCGCCCTGGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp GGGCCTCCCTCAGGCGTGCCGGGTCCTCGGGATGCAGCCAGTCTGCAGGCCGTGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: GPPSGVPGPRDAASLQAVGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...CACGGCCTGCAGACTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPTAGAS*LQGRRR
Trigger: ACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCAGGGCGCCCAGCGAGCCAGGGAAGGCGTGTaGAGCAGACACTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LPLALRLVERVCGQGAQRAREGV*SRHCGG
Trigger: GCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGC...TCGCTGGGCGCCCTGGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: FGEEAVPEGAGLGAQPPPLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGACCCACATTGCCCGGGGCCTCTCGGCTCCCCGGCAGGGCCAGGAAGCCAAAGGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RPTLPGASRLPGRARKPKGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...CTTTGGCTTCCTGGCCCTGCCGGGGAGCCGAGAGGCCCCGGGCAATGTGGGTCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp TTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: LGRKRFQKAQAWARSPRRNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTTCCCCGGCGCAGGCTaGGCCGACTCTGACAGCCGC +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRAFPGAG*ADSDSR
Trigger: GCGGCTGTCAGAGTCGGCTCAGCCTGCGCCGGGGAA...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302913.8
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRAGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAAGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LGLPLALRLVERVGGAEQGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...TTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRETRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPTAGAS*LQGRRR
Trigger: ACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPARSLT*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GGTRPSTGAPPRRACRWRVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...GCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGCCTGGGCAGGTGCTaGGAGCCTCCGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSLGRC*EPPRRW
Trigger: CCACCGCCTCGGAGGCTCCCAGCACCTGCCCAGGCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSVYHP*PRLLGL
Trigger: GAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPPGSQV*AAILLA
Trigger: AGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: RWNSAFHWRSASSSVSAAGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGCCAGGGAAGGCGTGTaGAGCAGACACTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREAREGV*SRHCGG
Trigger: GCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RWNSAFHWRSASSSVSAARHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AVELGLPLALRLVERVGGAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...GCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSATRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCTCCATGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGSRRRRPGRAAPAAPPCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...TGGAGGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RWNSAFHWRSASSSVSAAAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCCGGGGGCCTCATGGCTaGAGGGCAGGCGGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: HVGAPAVELGLPLALRLVRGPHG*RAGGVC
Trigger: GCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCG...GACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411582.4
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSATAGAS*LQGRRR
Trigger: ACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPECSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRELPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: GGTRPSTGAPPRRACRWRPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...GCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCACCAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRKRFQKAQAWARSPRRTSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...GGTGCGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGACGACAGAGCGCAGTaGCAGACGCGACCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPDDRAQ*QTRPKD
Trigger: GTCTTTGGGTCGCGTCTGTCACTGCGCTCTGTCGTC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCCAGGGAAGGCGTGTaGAGCAGACACTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEAREGV*SRHCGG
Trigger: GCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRERHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: AFHWRSASSSVSVALSNLGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...CAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGACCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGTGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: FGEEAVPEGAGLGAQPPPCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...CGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRGLPQA*RVLGMQ
Trigger: CTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLTAGAS*LQGRRR
Trigger: ACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGT...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGT +
Preference number: 4 (lower is better)
Translates to: AGRTHGEMQATTWDGGKRTAGAS*LQGRRR
Trigger: ACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGT...CCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRETGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRESDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: FGEEAVPEGAGLGAQPPPRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...CGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GGAEQFGEEAVPEGAGLGGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...GCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGATGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VALSNLGRKRFQKAQAWACSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...CGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPELPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CREDARRNAGDHVGRWQEGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVALSNLGRKRFQKAQAWGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...CCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPARSLT*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSASRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPESRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGGCTCCCGCGCTCTCCCCAAACAGCGTCACTGATGTCGGGTCACCCCCGAAGGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RLPRSPQTASLMSGHPRRVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CCTTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGGGAGAGCGCGGGAGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GAPAVELGLPLALRLVERNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRENSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCCACAGCCGCCGGAGGTaGGAGAGGAAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RWNSAFHWRSASSSVSAAHSRRR*ERKRRR
Trigger: TCTCCTCCTCTTCCTCTCCCACCTCCGGCGGCTGTG...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGCTCATTGGGATCCCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSAHWDP*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGGATCCCAATGAGC...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454485.5
3UTR CAA 72 bp AGTCGCCCAGCCAGCTGGGCCACGGGGCACACGACATaGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SRPASWATGHTT*WSPTTSLRASL
Trigger: GAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSVYHP*PRLLGL
Trigger: GAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GGTRPSTGAPPRRACRWRPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...GCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPRKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000241069.11
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHPGSQV*AAILLA
Trigger: AGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPPGSQV*AAILLA
Trigger: AGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGCAGCCTCCCCATGGGTaGAGCCTGGGCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGRTHGEMQATTWDGGKRQPPHG*SLGRCW
Trigger: CCAGCACCTGCCCAGGCTTCACCCATGGGGAGGCTG...CCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp GTGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAAGACGAGAGGGAGGATaGGGGCAGAGGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: VQGGRTEKCRRPRGTVARRREGG*GQRRGR
Trigger: CCGGCCCCGCCTCTGCCCTCATCCTCCCTCTCGTCT...TCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSARHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ALSNLGRKRFQKAQAWARRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...GCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGACCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp TTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGGGGCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FHWRSASSSVSVALSNLGPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...CCCCAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp ACCGAGGCGGCTCCCGCGCTCTCCCCAAACAGCGTCACTGATGTCGGGTCACCCGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: TEAAPALSPNSVTDVGSPAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...GGGTGACCCGACATCAGTGACGCTGTTTGGGGAGAGCGCGGGAGCCGCCTCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GAPAVELGLPLALRLVERTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGACCACAGCCTCGGCTaGCAGGTCACTTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPDHSLG*QVTYLG
Trigger: CCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCACGGCCCCCTCCTCCTaGCCTGTCCAGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPTAPSS*PVQCES
Trigger: AGACTCACACTGGACAGGGCAGGAGGAGGGGGCCGT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPETGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSASDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ACACGACATTGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: TRHCGRPPHRSGPPSGVPLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...CGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAARSLT*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPSRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: GAPAVELGLPLALRLVERAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSANSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGCGGAGCGGAGGACATaGGGGTCCCGCCGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTAERRT*GSRRGH
Trigger: GTGACCCCGGCGGGACCCCCATGTCCTCCGCTCCGC...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGAGCAGCCTCCCCATaGGTGAAGCCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGAASP*VKPGQV
Trigger: CACCTGCCCAGGCTTCACCCATGGGGAGGCTGCTCC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCAGCTGCAGAGGAGGTaGGGCAGGTTGGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPQLQRR*GRLAKM
Trigger: CATCTTTGCCAACCTGCCCCACCTCCTCTGCAGCTG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSASVYHP*PRLLGL
Trigger: GAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRACRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRAPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPERLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241069.11
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCCCGAGGCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HVGAPAVELGLPLALRLVPRRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGCCTCGG...GACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCCAGGGAAGGCGTGTaGAGCAGACACTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELAREGV*SRHCGG
Trigger: GCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGTGTTCAAAGACGTAGGCGTAGACCCGGGCACCCTGGGCAGCCAGTCGCCCAGCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GVQRRRRRPGHPGQPVAQRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...CTGGGCGACTGGCTGCCCAGGGTGCCCGGGTCTACGCCTACGTCTTTGAACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPETPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGATCAGGAGGGCGGGGACAGCAGGTaGATGCCCACCGAGGCGGCT +
Preference number: 4 (lower is better)
Translates to: DARRNAGDHVGRWQEDQEGGDSR*MPTEAA
Trigger: AGCCGCCTCGGTGGGCATGCACCTGCTGTCCCCGCC...CTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LGLPLALRLVERVGGAEQWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...TTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGACCACAGCCTCGGCTaGCAGGTCACTTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEDHSLG*QVTYLG
Trigger: CCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGACCACAGCCTCGGCTaGCAGGTCACTTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSADHSLG*QVTYLG
Trigger: CCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCTCAGCCTGAGACATaGAGAGGACCGGGAGCCCCG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPAQPET*RGPGAP
Trigger: CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCAGGCGGCGTTCCAGTaGCAGACGCCGACCGACGAC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELQAAFQ*QTPTDD
Trigger: GTCGTCGGTCGGCGTCTGGCACTGGAACGCCGCCTG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPTGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPSDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HVGAPAVELGLPLALRLVSDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...GACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGACCCACATTGCCCGGGGCCTCTCGGCTCCCCGGCAGGGCCAGGAAGCCAAAGCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: RPTLPGASRLPGRARKPKRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...CTTTGGCTTCCTGGCCCTGCCGGGGAGCCGAGAGGCCCCGGGCAATGTGGGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGATCAGGAGGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: DARRNAGDHVGRWQEDQEGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...CTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGATGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TCATTCCCACCAGTGCCGCCTGGAGGACAGCCCACAAGGTGGGCCAGCTGCGTGCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: SFPPVPPGGQPTRWASCVPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...CACGCAGCTGGCCCACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGCACCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSTCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGGTGCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCCATGGGTGAAGCCTaGGCAGGTGCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPMGEA*AGAGSL
Trigger: GAGGCTCCCAGCACCTGCCCAGGCTTCACCCATGGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTCTGAGATCCCTGAGTaGGGCCCTTCCCCACGGTCC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPESEIPE*GPSPRS
Trigger: GGACCGTGGGGAAGGGCCCCACTCAGGGATCTCAGA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
3UTR CAA 72 bp TCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SASSSVSVALSN*GRKRFQKAQAW
Trigger: CCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GAPAVELGLPLALRLVERMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSACRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp ACCTGCGCTGGTCGTGTCCGAAGGCAGGCTACCAGCTCTGTGTCATTCCCACCAGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: TCAGRVRRQATSSVSFPPGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...TGGTGGGAATGACACAGAGCTGGTAGCCTGCCTTCGGACACGACCAGCGCAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSACHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GAEQFGEEAVPEGAGLGAWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...CGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: FGEEAVPEGAGLGAQPPPSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...CGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CREDARRNAGDHVGRWQESDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGSDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPELTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSARSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCATGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLVERVGGAEQFGEEAVPWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...TGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: CREDARRNAGDHVGRWQEPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDRESTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRASTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: GAPAVELGLPLALRLVERSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...ACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGCACCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSASTCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGGTGCT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELARSLT*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCCAGCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPASCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGCTGGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000419336.6
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGCAGGCGGCGTCTGCTaGGAGAAAGAAAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPAGGVC*EKERER
Trigger: CCTTTCCCTTTCTTTCTCCCAGCAGACGCCGCCTGC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp ACCGAGGCGGCTCCCGCGCTCTCCCCAAACAGCGTCACTGATGTCGGGTCACCCATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TEAAPALSPNSVTDVGSPMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...GGGTGACCCGACATCAGTGACGCTGTTTGGGGAGAGCGCGGGAGCCGCCTCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GGAEQFGEEAVPEGAGLGPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...GCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSARKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPERKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRAPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCACTCGTTGTCTTTGCTaGAGCCTGGGGCCCCGTAAA +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPTRCLC*SLGPRK
Trigger: TTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR TCA 90 bp AGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGACTCGTTGTCTTTGCTaGAGCCTGGGGCCCCGTAAA +
Preference number: 4 (lower is better)
Translates to: RSSSGGTRPSTGAPPRRATRCLC*SLGPRK
Trigger: TTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGT...CGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR TCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGACTCGTTGTCTTTGCTaGAGCCTGGGGCCCCGTAAA +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPTRCLC*SLGPRK
Trigger: TTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGT...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000454485.5
CDS-3UTR TCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GTCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTGGGGTGTCACTGAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: VCRPWKSPALMRASGVSLRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...CAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000241069.11
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGAGGGAGCTCAGCCTaGGACATGCAGAGGACCGGG +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTGGSSA*DMQRTG
Trigger: CCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCC...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTGGGTCTTCAGGCGAATaGCCCGCAGCCGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPGSSGE*PAAGPH
Trigger: GTGGGGGCCGGCTGCGGGGCATTCGCCTGAAGACCC...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTCCAGCTGCGTGGCCCTaGGACGGGCCTCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTPAAWP*DGPLPC
Trigger: GCATGGGAGAGGCCCGTCGCAGGGCCACGCAGCTGG...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AFHWRSASSSVSVALSNLWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...CAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTCTCGTCGAGCGTGTCTaGGGCCAGGGCGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPLVERV*GQGAQR
Trigger: TCGCTGGGCGCCCTGGCCGCAGACACGCTCGACGAG...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGGGCAGGCGGCGTCTaGTGGGAGAAAGAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSARAGGV*WEKERE
Trigger: TTCCCTTTCTTTCTCCCAGCAGACGCCGCCTGCCCT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTACCAAGAAGCGGCCATCGTACACGTCCAAGGAGGAGGCCCCACTGTAGAAGCGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: VPRSGHRTRPRRRPHCRSGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...GCTTCTACAGTGGGGCCTCCTCCTTGGACGTGTACGATGGCCGCTTCTTGGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGGTTCACCAGGACCTGCGCTGGTCGTGTCCGAAGGCAGGCTACCAGCTCTGTGCACCAGGACCTGCGCTaGTCGTGTCCGAAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WFTRTCAGRVRRQATSSVHQDLR*SCPKAG
Trigger: GCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTG...CACAGAGCTGGTAGCCTGCCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp CAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QFGEEAVPEGAGLGAQPPVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...CGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCAGCACCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: HVGAPAVELGLPLALRLVSTCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGGTGCT...GACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCAGCACCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLSTCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGGTGCT...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CACCTCCAGCGGCCGCAGGTCCAGACTAACGTACTGCTGAGCCCCCGCCGTGTACCAGTCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: HLQRPQVQTNVLLSPRRVPVCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGACTGG...TACACGGCGGGGGCTCAGCAGTACGTTAGTCTGGACCTGCGGCCGCTGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGCCCAAACAGCGTCACTaGTGTCGGGTCACCCCCGAA +
Preference number: 4 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLPKQRH*CRVTPE
Trigger: TTCGGGGGTGACCCGACATCAGTGACGCTGTTTGGG...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPRKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: GGAEQFGEEAVPEGAGLGRKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...GCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACTCGTTGTCTTTGCTaGAGCCTGGGGCCCCGTAAA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPETRCLC*SLGPRK
Trigger: TTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR TCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAAGAAAGGGAAAGGGTaGAGGGTCGGTCGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAKKGKG*RVGREA
Trigger: GGCTTCTCGACCGACCCTTCACCCTTTCCCTTTCTT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGAAGATTTTCTCCTCTaGCGTGTAGTTTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPEDFLL*RVVSRG
Trigger: CCCTCTCGAAACTACACGGCAGAGGAGAAAATCTTC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSACRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPECRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGTGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp CGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: RLVERVGGAEQFGEEAVPGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...TGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp AGTCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTGGGGTGTCACTGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: SLQAVEVSRVDEGLWGVTAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...AGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCATGGTGTCCACACGTTaGGGTACAGGCAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGMVSTR*GTGSPR
Trigger: GCGAGGACTGCCTGTACCTCAACGTGTGGACACCAT...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCACTCGTTGTCTTTGCTaGAGCCTGGGGCCCCGTAAA +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLTRCLC*SLGPRK
Trigger: TTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGT...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR TCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGCTGAGCCGACTCTaGCAGCCGCCGCCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCRLSRL*QPPPPA
Trigger: GGCCGGAGGCGGCGGCTGTCAGAGTCGGCTCAGCCT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302913.8
CDS-3UTR TCA 90 bp GTGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGACTGCCCTGTCCAGTGTaGGTCTCTCGGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: VQGGRTEKCRRPRGTVARLPCPV*VSRFEE
Trigger: CTCCTCAAACCGAGAGACTCACACTGGACAGGGCAG...TCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCAGGAGGAGAAAAGAATaGCCGGAAGACGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPRRRKE*PEDGNR
Trigger: TCTGTTCCCGTCTTCCGGTCATTCTTTTCTCCTCCT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: LQRWNSAFHWRSASSSVSGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...CGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGAGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSASSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPSDGVP*VAPQRG
Trigger: TCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCT...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp ACACGACATTGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TRHCGRPPHRSGPPSGVPPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...CGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTCGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGATGCAGCACGGCCCTGTaGAACAGGCCCCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGCSTAL*NRPRLG
Trigger: GCCCAGCCGGGGCCTGTTCCACAGGGCCGTGCTGCA...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGTGGGCCAGCTGCGTaGCCCTGCGACGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVGGPAA*PCDGPL
Trigger: GAGAGGCCCGTCGCAGGGCCACGCAGCTGGCCCACC...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEVFAEA*GPVNQK
Trigger: TTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGAC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GTGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VQGGRTEKCRRPRGTVARGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...TCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGCTGTAACAGTTTATTaGCAGCCCAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEAVTVY*QPRGAK
Trigger: CTTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTCCCATGGGTGAAGCCTaGGCAGGTGCTGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTPMGEA*AGAGSL
Trigger: GAGGCTCCCAGCACCTGCCCAGGCTTCACCCATGGG...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR TCA 90 bp GTCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTGGGGTGTCACTGGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: VCRPWKSPALMRASGVSLGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...CAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCGAGGCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLPRRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGCCTCGG...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTCTGCCCTGTCCAGTGTaGGTCTCTCGGTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTLPCPV*VSRFEE
Trigger: CTCCTCAAACCGAGAGACTCACACTGGACAGGGCAG...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAAGACGAGAGGGAGGATaGGGGCAGAGGCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVRREGG*GQRRGR
Trigger: CCGGCCCCGCCTCTGCCCTCATCCTCCCTCTCGTCT...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGGGACAGCAGGTGCATaGCCACCGAGGCGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCGTAGA*PPRRLP
Trigger: CGGGAGCCGCCTCGGTGGGCATGCACCTGCTGTCCC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGACAAGGTGGGCCAGCTaGGTGGCCCTGCGACGGGCC +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRTRWAS*VALRRA
Trigger: GGCCCGTCGCAGGGCCACGCAGCTGGCCCACCTTGT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGACCACAGCCTCGGCTaGCAGGTCACTTACCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTDHSLG*QVTYLG
Trigger: CCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTC...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGATCAGGAGCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: DARRNAGDHVGRWQEDQEHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...CTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTGGACGCACGGAGAAATaGAGGCGACCACGTGGGACG +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPGRTEK*RRPRGT
Trigger: CGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCC...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCACTCGTCGAGCGTGTCTaGGGCCAGGGCGCCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPLVERV*GQGAQR
Trigger: TCGCTGGGCGCCCTGGCCGCAGACACGCTCGACGAG...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGCCGGGTCCTCGGGATaGAGCCAGTCTGCAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPAGSSG*SQSAGR
Trigger: ACGGCCTGCAGACTGGCTGCATCCCGAGGACCCGGC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCACCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: RLVERVGGAEQFGEEAVPPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...TGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGGAACAGGCCCCGGCTaGGCGGGGACAGCAGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPGTGPG*AGTAGA
Trigger: TGCACCTGCTGTCCCCGCCCAGCCGGGGCCTGTTCC...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCACTCCCATGCCCACCGTaGCCCAGGGTCCATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPLPCPP*PRVHWG
Trigger: CCCCCAATGGACCCTGGGCCACGGTGGGCATGGGAG...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGCCCACCAGTGCCGCCTaGAGGACAGCCCACAAGGTG +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVPTSAA*RTAHKV
Trigger: CACCTTGTGGGCTGTCCTCCAGGCGGCACTGGTGGG...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: HVGAPAVELGLPLALRLVVFAEA*GPVNQK
Trigger: TTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGAC...GACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR CCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACC +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLARSLT*GTPTRT
Trigger: GGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGC...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGSRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp GGACCTGCGCTGGTCGTGTCCGAAGGCAGGCTACCAGCTCTGTGTCATTCCCACGGGGCCAGGAGAGCGTaGAAGCACGGTGTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GPALVVSEGRLPALCHSHGARRA*KHGVQR
Trigger: TCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC...GTGGGAATGACACAGAGCTGGTAGCCTGCCTTCGGACACGACCAGCGCAGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KAPRGRELSLRHAEDREPYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGAACTCGGCCTTCCACTaGCGCTCCGCCTCGTCGAGC +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVNSAFH*RSASSS
Trigger: GCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTT...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGCTGTAACAGTTTATTaGCAGCCCAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HHVGAPAVELGLPLALRLAVTVY*QPRGAK
Trigger: CTTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGC...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGCTGTAACAGTTTATTaGCAGCCCAGAGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPAVTVY*QPRGAK
Trigger: CTTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGCCTGGGCAGGTGCTaGGAGCCTCCGAGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCSLGRC*EPPRRW
Trigger: CCACCGCCTCGGAGGCTCCCAGCACCTGCCCAGGCT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCACAGCCGCCGGAGGTaGGAGAGGAAGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGHSRRR*ERKRRR
Trigger: TCTCCTCCTCTTCCTCTCCCACCTCCGGCGGCTGTG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTCAGCCTCCCCATGGGTaGAGCCTGGGCAGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCQPPHG*SLGRCW
Trigger: CCAGCACCTGCCCAGGCTTCACCCATGGGGAGGCTG...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCCAGGGAAGGCGTGTaGAGCAGACACTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPAREGV*SRHCGG
Trigger: GCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGC...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTCGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGCCAGGAGACCCACATTaGCCGGGGCCTCTCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRPGDPH*PGPLGS
Trigger: GGAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGG...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGGAAGATTTTCTCCTCTaGCGTGTAGTTTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEEDFLL*RVVSRG
Trigger: CCCTCTCGAAACTACACGGCAGAGGAGAAAATCTTC...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp GGGGCCAGGAGAGCGTGGAAGCACGGTGTTCAAAGACGTAGGCGTAGACCCGGGAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: GARRAWKHGVQRRRRRPGSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...CCCGGGTCTACGCCTACGTCTTTGAACACCGTGCTTCCACGCTCTCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGTGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCGCTCAGCTCACGGTTaGGGTTCCACATCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGRSAHG*GSTSRC
Trigger: GCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTCCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELVFAEA*GPVNQK
Trigger: TTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGAC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CCA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLVFAEA*GPVNQK
Trigger: TTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGAC...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454485.5
CDS-3UTR CCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGTCGCCCAGCCAGCTaGGCCACGGGGCACACGACA +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRSRPAS*ATGHTT
Trigger: TGTCGTGTGCCCCGTGGCCCAGCTGGCTGGGCGACT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGGTACGGGGGCCATTGTaGGGCCTTGGGGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRVRGPL*GLGVSG
Trigger: CCCCGAGACCCCAAGGCCCCACAATGGCCCCCGTAC...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCATGCAGGCGACCACGTaGGACGGTGGCAAGAGGATC +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGMQATT*DGGKRI
Trigger: GATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCAT...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGAAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRSVYHP*PRLLGL
Trigger: GAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCT...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: VELVLPVHHVGAPAVELGRKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp AGGAGAACCGGAAGACGCTTTCTTGAGGCAGCACGTGCCATTCGTGGTTCACCAGCGTGTCGGTGGCGCTaGGCAATTTGGGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RRTGRRFLEAARAIRGSPACRWR*AIWGGS
Trigger: GCTTCCTCCCCAAATTGCTCAGCGCCACCGACACGC...TGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR GCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCACGTCACCAGCAGCTCTaGATCCTCCCGGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPRHQQL*ILPALS
Trigger: GCTGAGGGCCGGGAGGATGCAGAGCTGCTGGTGACG...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGAACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRTPDQG*LGSGGR
Trigger: TCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGT...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCTGCCACGTTCTCCTaGACCCACTGCAGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPAATFS*THCRAS
Trigger: GCTGGCCCTGCAGTGGGTGCAGGAGAACGTGGCAGC...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCATTGGGATCCCCTGTaGGGGCAAAGTTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRHWDPL*GQSWPS
Trigger: ACTGGGCCAACTTTGCCCGCACAGGGGATCCCAATG...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSTGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCTGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRTGSHG*LRKGDA
Trigger: GGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTTGGCCCAGGGTCCATTaGGGGCACCGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSWPRVH*GHRSAA
Trigger: TGCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCA...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp TGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGATATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CRSSSGGTRPSTGAPPRRYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...TCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGGGAGCAGCCTCCCCATaGGTGAAGCCTGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRGAASP*VKPGQV
Trigger: CACCTGCCCAGGCTTCACCCATGGGGAGGCTGCTCC...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGGTCTCGGGGCTCATTaGGATCCCTGCAGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCGLGAH*DPCRPW
Trigger: CCACGGCCTGCAGGGATCCCAATGAGCCCCGAGACC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440755.5
CDS-3UTR TCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCSVYHP*PRLLGL
Trigger: GAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR TCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGACTAACGTACTGCTaGGCCCCCGCCGTGTACGGG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRRLTYC*APAVYG
Trigger: CCCGTACACGGCGGGGGCTCAGCAGTACGTTAGTCT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTACCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVPGSQV*AAILLA
Trigger: AGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGG...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTCCGGGGTCACAGGTCTaGGCAGCGATCCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSPGSQV*AAILLA
Trigger: AGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGG...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGCTCCGCAAAGGGGATaGCCAGGAAAGCAGAGACAG +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVAPQRG*PGKQRQ
Trigger: CTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATGTCATTCCCACCAGTaGCGCCTGGAGGACAGCCCA +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRCHSHQ*RLEDSP
Trigger: TGGGCTGTCCTCCAGGCGGCACTGGTGGGAATGACA...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGACACCCACCAGCACCTaGAGGCCGTGGAAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRTPTST*RPWKSP
Trigger: GGGAGACTTCCACGGCCTGCAGGTGCTGGTGGGTGT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR GCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGAAGATTTTCTCCTCTaGCGTGTAGTTTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELEDFLL*RVVSRG
Trigger: CCCTCTCGAAACTACACGGCAGAGGAGAAAATCTTC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR GCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTACGGCCCCCTCCTCCTaGCCTGTCCAGTGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSTAPSS*PVQCES
Trigger: AGACTCACACTGGACAGGGCAGGAGGAGGGGGCCGT...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGGACGCACGGAGAAATaGAGGCGACCACGTGGGACG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCGRTEK*RRPRGT
Trigger: CGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGACTGACCAAGGCTGCTTaGGCTCCGGTGGCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: PVQCESLGLRRKGALGLRLTKAA*APVAES
Trigger: GCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAG...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTTGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAGGGCACACGACATTGTaGTCGCCCACCACATCGCTC +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGGHTTL*SPTTSL
Trigger: GAGCGATGTGGTGGGCGACCACAATGTCGTGTGCCC...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGGGTCTCGGGGCTCATTaGGATCCCCTGTGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRGLGAH*DPLCGQ
Trigger: TTGCCCGCACAGGGGATCCCAATGAGCCCCGAGACC...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGGCCATTGTGGGGCCTTaGGGTCTCGGGGCTCATTGG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRAIVGP*GLGAHW
Trigger: CCAATGAGCCCCGAGACCCCAAGGCCCCACAATGGC...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTCAAACAACAAAGGCGTaGGGGTCCCTGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPQTTKA*GSLRRV
Trigger: CACCCTTCTCAGGGACCCCCACGCCTTTGTTGTTTG...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGGACCACGTGGGACGGTaGCAAGAGGATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRDHVGR*QEDQEN
Trigger: ATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTC...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGTGCAGGGCCAGCCTCTaGTCCAGGAGACCCACATTG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRCRASL*SRRPTL
Trigger: CAATGTGGGTCTCCTGGATCAGAGGCTGGCCCTGCA...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGACGGAAGACGCTTTCTTaGGGCAGCACGTGCCATTCG +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGRKTLS*GSTCHS
Trigger: CGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCG...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR TCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTATGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGTGGTTCACCAGGACCTaGGCTGGTCGTGTCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRWFTRT*AGRVRR
Trigger: CCTTCGGACACGACCAGCGCAGGTCCTGGTGAACCA...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTGGTTCCACATCTCGGTaGCCTCAAAACCGTCACCAG +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLGSTSR*PQNRHQ
Trigger: CTGGTGACGGTTTTGAGGGCACCGAGATGTGGAACC...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAATGCAGGCGACCACGTaGGACGGTGGCAAGAGGATC +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPMQATT*DGGKRI
Trigger: GATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCAT...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGATCCCTGCAGGCCGTaGAAGTCTCCCGCGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCDPCRP*KSPALM
Trigger: CATCAACGCGGGAGACTTCCACGGCCTGCAGGGATC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440755.5
3UTR CAA 72 bp TACCACAGGCACGAAGGAGAACCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTCGTGGTTCACCAGGAC +
Preference number: 4 (lower is better)
Translates to: YHRHEGEPEDAF*RQHVPFVVHQD
Trigger: GTCCTGGTGAACCACGAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGGTTCTCCTTCGTGCCTGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR TCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGGGGGATCCCAAAGATaGACTCGATCTCGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPGGSQR*TRSRSR
Trigger: ACGGCTACGAGATCGAGTTCATCTTTGGGATCCCCC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR GCA 90 bp CGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: RTGSSSAPCRSSSGGTRPGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...AGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGCCGGGGGTATaGTGTCCACACGTTGAGGTA +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPCRPGV*CPHVEV
Trigger: TACCTCAACGTGTGGACACCATACCCCCGGCCTACA...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGACCACCCGGTAGTTCATaGACACCAGCACAGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGPPGSS*TPAQSS
Trigger: AGAGGACTGTGCTGGTGTCCATGAACTACCGGGTGG...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAAGCACGTGCCATTCGTaGTTCACCAGGACCTGCGCT +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVSTCHS*FTRTCA
Trigger: AGCGCAGGTCCTGGTGAACCACGAATGGCACGTGCT...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAGACCACGTGGGACGGTaGCAAGAGGATCAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPDHVGR*QEDQEN
Trigger: ATTCTCCTGATCCTCTTGCCACCGTCCCACGTGGTC...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR TCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTCCTCTGGGGTGTCACTaGGGAAGTCTCCATCTACCA +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCPLGCH*GSLHLP
Trigger: TGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGG...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR GCA 90 bp GAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATA +
Preference number: 4 (lower is better)
Translates to: ELVLPVHHVGAPAVELGLGSTSR*PQNLGI
Trigger: TATACCCAGGTTTTGAGGGCACCGAGATGTGGAACC...AAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTC +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCVDEGL*GVTEEV
Trigger: GACTTCCTCAGTGACACCCCAGAGGCCCTCATCAAC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp GGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSSAPCRSSSGGTRPSTYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...AGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp TGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCCTGAGTCAAACAACAAAGGCGTaGGGGTCCCTGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CESLGLRRKGALGLRSLSQTTKA*GSLRRV
Trigger: CACCCTTCTCAGGGACCCCCACGCCTTTGTTGTTTG...ACTCAGGGATCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR GCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGCAGCGATCCTGCTTaGTGTAGTGGTCGAACTGGT +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCSSDPA*CSGRTG
Trigger: ACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CCA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAA +
Preference number: 4 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPVFAEA*GPVNQK
Trigger: TTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGAC...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR TCA 90 bp AGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGGAGGAGAAAAGAATaGCCGGAAGACGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SDPACCSGRTGSSSAPCRRRRKE*PEDGNR
Trigger: TCTGTTCCCGTCTTCCGGTCATTCTTTTCTCCTCCT...CCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR GCA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGAAGATTTTCTCCTCTaGCGTGTAGTTTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGEDFLL*RVVSRG
Trigger: CCCTCTCGAAACTACACGGCAGAGGAGAAAATCTTC...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR GCA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGAAGATTTTCTCCTCTaGCGTGTAGTTTCGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AAILLAVVVELVLPVHHVEDFLL*RVVSRG
Trigger: CCCTCTCGAAACTACACGGCAGAGGAGAAAATCTTC...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CCA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTTATCGCATCAGTCGCTaGGCGAAGATTTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCYRISR*AKIFSS
Trigger: AGAGGAGAAAATCTTCGCCCAGCGACTGATGCGATA...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS CCA 90 bp CCACGACCGAGGTGCATGCGGCAATACCGCGCGGCGCCTGCTTCCTaGAGGCGGCCGGCTCAGGAGCCCCCGAGACCCCGCGTGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PRPRCMRQYRAAPAS*RRPAQEPPRPRVGE
Trigger: CTCTCCCACGCGGGGTCTCGGGGGCTCCTGAGCCGGCCGCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 90 bp GTGTGGACAGGGCTGCTGCAGCGGGGTCCCCACGACCGAGGTGCATaGGGCAATACCGCGCGGCGCCTGCTTCCTGGAGGCGGCCGGCTC +
Preference number: 5 (lower is better)
Translates to: VWTGLLQRGPHDRGA*GNTARRLLPGGGRL
Trigger: GAGCCGGCCGCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGTGGGGACCCCGCTGCAGCAGCCCTGTCCACAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 90 bp ACCCGTGTGGACAGGGCTGCTGCAGCGGGGTCCCCACGACCGAGGTaGATGCGGCAATACCGCGCGGCGCCTGCTTCCTGGAGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: TRVDRAAAAGSPRPR*MRQYRAAPASWRRP
Trigger: CGGCCGCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGTGGGGACCCCGCTGCAGCAGCCCTGTCCACACGGGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS CCA 90 bp CAGGGGGAGGCCGGGCCTCGGAGCAGCCTCCCCATGGGTGAAGCCTaGGCAGGTGCTGGGAGCCTCCGAGGCGGTGGCGCTGAGCAATTT +
Preference number: 5 (lower is better)
Translates to: QGEAGPRSSLPMGEA*AGAGSLRGGGAEQF
Trigger: AAATTGCTCAGCGCCACCGCCTCGGAGGCTCCCAGCACCTGCCCAGGCTTCACCCATGGGGAGGCTGCTCCGAGGCCCGGCCTCCCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS CCA 90 bp ACCAGGGTCCGGTCGGGGCATGACATCACCAGGCCTAGCATTCATTaGCCACGCGGCTGGCAGGTGGGAGCGGCCTGGCTCGGGCGCCCC +
Preference number: 5 (lower is better)
Translates to: TRVRSGHDITRPSIH*PRGWQVGAAWLGRP
Trigger: GGGGCGCCCGAGCCAGGCCGCTCCCACCTGCCAGCCGCGTGGCCAATGAATGCTAGGCCTGGTGATGTCATGCCCCGACCGGACCCTGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS-3UTR CAA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: RWNSAFHWRSASSSVSAASRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp GGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: GGTRPSTGAPPRRACRWRSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...GCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGGGTCTCGGGGCTCATaGGGATCCCTGCAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: AVELGLPLALRLVERVGGGSRGS*GSLQAV
Trigger: CACGGCCTGCAGGGATCCCAATGAGCCCCGAGACCC...GCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440755.5
CDS CCA 90 bp AGGCTGCTGGGCGAGGCCGCACTCCGCGGCGGCAGTGGAAACTTCTaGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCTGACGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RLLGEAALRGGSGNF*NPRGWVCAGSLTGD
Trigger: GTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCACTGCCGCCGCGGAGTGCGGCCTCGCCCAGCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS CCA 90 bp AGCACGCGCAAGGCTGCTGGGCGAGGCCGCACTCCGCGGCGGCAGTaGAAACTTCTGGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: STRKAAGRGRTPRRQ*KLLEPPRVGLCWFP
Trigger: AGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCACTGCCGCCGCGGAGTGCGGCCTCGCCCAGCAGCCTTGCGCGTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPPDQGC*GSGGRK
Trigger: CTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ALSNLGRKRFQKAQAWARVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...GCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp TTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGCGCAGCCCCCGCCGTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: FGEEAVPEGAGLGAQPPPWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...CGGCGGGGGCTGCGCGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: AKAPRGRELSLRHAEDREGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp ACCACATCGCTCAGGGCCTCCCTCAGGCGTGCCGGGTCCTCGGGATGCAGCCAGGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: TTSLRASLRRAGSSGCSQGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...CTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGTCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp CGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCTGCGGCCTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: RWNSAFHWRSASSSVSAAWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...GGCCGCAGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS CCA 90 bp AGGCTGCTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCCCAGGAAAGCAGAGACAGGGCCCCC +
Preference number: 5 (lower is better)
Translates to: RLLGLRWQKATGSHG*LRKGDAQESRDRAP
Trigger: GGGGGCCCTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 90 bp CCCTGTGGCCGTAGGGGAAGAGGCCGTGTTCACAGCCGCCGGAGGTaGGAGAGGAAGAGGAGGAGAAGCTGGTGGAGGAGGAGGAGGGGC +
Preference number: 5 (lower is better)
Translates to: PCGRRGRGRVHSRRR*ERKRRRSWWRRRRG
Trigger: GCCCCTCCTCCTCCTCCACCAGCTTCTCCTCCTCTTCCTCTCCCACCTCCGGCGGCTGTGAACACGGCCTCTTCCCCTACGGCCACAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp GCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: AFHWRSASSSVSVALSNLSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...CAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GTGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VQGGRTEKCRRPRGTVARVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...TCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp TCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SVALSNLGRKRFQKAQAWVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...CCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: AKAPRGRELSLRHAEDRETGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPTGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGGCGGGGTCTCGGGGCTCATaGGGATCCCTGGGGAACCCC +
Preference number: 5 (lower is better)
Translates to: VALSNLGRKRFQKAQAWAGSRGS*GSLGNP
Trigger: GGGGTTCCCCAGGGATCCCAATGAGCCCCGAGACCC...CGCCCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000454485.5
CDS TCA 90 bp CAGCAGACACTGCGGGGGCCTCATGGCTGCAGGGCAGGCGGCGTGTaGCAGACAGACGGACAGAAGCCCGTGGAGACAGACACGCGCAGA +
Preference number: 5 (lower is better)
Translates to: QQTLRGPHGCRAGGV*QTDGQKPVETDTRR
Trigger: TCTGCGCGTGTCTGTCTCCACGGGCTTCTGTCCGTCTGTCTGTCACACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAPDQGC*GSGGRK
Trigger: CTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGGATCAGGAGGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: DARRNAGDHVGRWQEDQEVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...CTCCTGATCCTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPEWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGAGAGACTCGTTGTCTTaGCTGAAGCCTGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: AKAPRGRELSLRHAEDRERDSLS*LKPGAP
Trigger: CGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCT...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp CTCGGCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAAAGAGACTCGTTGTCTTaGCTGAAGCCTGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LGLPLALRLVERVGGAEQRDSLS*LKPGAP
Trigger: CGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCT...TTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454485.5
CDS-3UTR CAA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGGGCTGTAACAGTTTATaGGCAGCCCAGAGGGGCGAA +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPGCNSL*AAQRGE
Trigger: TTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGCC...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCAGGAGGTGGGGCAGGTaGGCAAAGATGAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPRRWGR*AKMRGE
Trigger: CTCTCCCCTCATCTTTGCCAACCTGCCCCACCTCCT...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS GCA 90 bp AGCCAGGGAAGGCGTGTGCAGCAGACACTGCGGGGGCCTCATGGCTaGAGGGCAGGCGGCGTCTGCTGGGAGAAAGAAAGGGAAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SQGRRVQQTLRGPHG*RAGGVCWEKERERV
Trigger: CACCCTTTCCCTTTCTTTCTCCCAGCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCTTCCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS CCA 90 bp ACCAAGGCTGCTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGATGCCCAGGAAAGCAGAGACAGGGC +
Preference number: 5 (lower is better)
Translates to: TKAAWAPVAESDGVP*VAPQRGCPGKQRQG
Trigger: GCCCTGTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 90 bp GCCGCACTCCGCGGCGGCAGTGGAAACTTCTGGAACCCCCGCGGGTaGGTCTGTGCTGGTTCCCTGACGGGTGACTTCGGACTTTCGTCA +
Preference number: 5 (lower is better)
Translates to: AALRGGSGNFWNPRG*VCAGSLTGDFGLSS
Trigger: TGACGAAAGTCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCACTGCCGCCGCGGAGTGCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPPDQGC*GSGGRK
Trigger: CTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp GCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: AKAPRGRELSLRHAEDREPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...CTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp TTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGAGAGACTCGTTGTCTTaGCTGAAGCCTGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: LLAAQRGEGTAGEGAQPERDSLS*LKPGAP
Trigger: CGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCT...CTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp GGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCGCTGATGAGAGACTCGTaGTCTTTGCTGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: GTAGEGAQPETCRGPGAPLMRDS*SLLKPG
Trigger: CCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAG...CGGGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPTGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS TCA 90 bp CTTCTGGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCTGACGGGTaGCTTCGGACTTTCGTCACCAGGGTCCGGTCGGGGCATGACATC +
Preference number: 5 (lower is better)
Translates to: LLEPPRVGLCWFPDG*LRTFVTRVRSGHDI
Trigger: GATGTCATGCCCCGACCGGACCCTGGTGACGAAAGTCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS TCA 90 bp GTGGAAACTTCTGGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCTaGCGGGTGACTTCGGACTTTCGTCACCAGGGTCCGGTCGGGGCA +
Preference number: 5 (lower is better)
Translates to: VETSGTPAGGSVLVP*RVTSDFRHQGPVGA
Trigger: TGCCCCGACCGGACCCTGGTGACGAAAGTCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS GCA 90 bp GACATTGTGGTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAGCCAGTCTGTGTAATGCAGGACCAC +
Preference number: 5 (lower is better)
Translates to: DIVVAHHIAQGLPQA*RVLGMQPVCVMQDH
Trigger: GTGGTCCTGCATTACACAGACTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGACCACAATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000651875.1
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGTCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: CREDARRNAGDHVGRWQETGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp CACCTCCAGCGGCCGCAGGTCCAGACTAACGTACTGCTGAGCCCCCGCCGTGTAGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: HLQRPQVQTNVLLSPRRVVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...TACACGGCGGGGGCTCAGCAGTACGTTAGTCTGGACCTGCGGCCGCTGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGGCTGTAACAGTTTATaGGCAGCCCAGAGGGGCGAA +
Preference number: 5 (lower is better)
Translates to: WQPRGAKAPRGRELSLRHGCNSL*AAQRGE
Trigger: TTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGCC...ATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCGGCTGTAACAGTTTATaGGCAGCCCAGAGGGGCGAA +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPGCNSL*AAQRGE
Trigger: TTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGCC...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000419336.6
ENST00000428317.7
CDS GCA 90 bp CAGACACTCTGGAAGGTTGTAGCGTCTACCACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATGGGTGGC +
Preference number: 5 (lower is better)
Translates to: QTLWKVVASTTPDQG*LGSGGRKRRGPMGG
Trigger: GCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCTACAACCTTCCAGAGTGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS-3UTR CAA 90 bp CCCGCCGGGGTCACAGGTCTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: PAGVTGLSSDPACCSGRTPDQGC*GSGGRK
Trigger: CTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGG...AGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAGACCTGTGACCCCGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp TCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGTCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: SVALSNLGRKRFQKAQAWSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...CCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GAGCGTGGAAGCACGGTGTTCAAAGACGTAGGCGTAGACCCGGGCACCCTGGGCTCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ERGSTVFKDVGVDPGTLGSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...GCCCAGGGTGCCCGGGTCTACGCCTACGTCTTTGAACACCGTGCTTCCACGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSAYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp ACCGAGGCGGCTCCCGCGCTCTCCCCAAACAGCGTCACTGATGTCGGGTCACCCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: TEAAPALSPNSVTDVGSPYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GGGTGACCCGACATCAGTGACGCTGTTTGGGGAGAGCGCGGGAGCCGCCTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442452.1
CDS-3UTR CAA 90 bp GCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGCCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: AFHWRSASSSVSVALSNLPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...CAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGCAGGGAGGACGCACGGAGAAATGCAGGCGACCACGTGGGACGGTGGCAAGAGAGAGACTCGTTGTCTTaGCTGAAGCCTGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: CREDARRNAGDHVGRWQERDSLS*LKPGAP
Trigger: CGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCT...CTCTTGCCACCGTCCCACGTGGTCGCCTGCATTTCTCCGTGCGTCCTCCCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp AAGGCACCGCGGGGGAGGGAGCTCAGCCTGAGACATGCAGAGGACCGGGAGCCCCTGATGAGAGACTCGTaGTCTTTGCTGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: KAPRGRELSLRHAEDREPLMRDS*SLLKPG
Trigger: CCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAG...GGGCTCCCGGTCCTCTGCATGTCTCAGGCTGAGCTCCCTCCCCCGCGGTGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp GTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: VGGAEQFGEEAVPEGAGLVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...CAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCTTCCACTGGCGCTCCGCCTCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: HHVGAPAVELGLPLALRLYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GAGGCGGAGCGCCAGTGGAAGGCCGAGTTCCACCGCTGGAGCTCCTACATGGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GCCTTCCACTGGCGCTCCGCCTCGTCGAGCGTGTCGGTGGCGCTGAGCAATTTGTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: AFHWRSASSSVSVALSNLYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...CAAATTGCTCAGCGCCACCGACACGCTCGACGAGGCGGAGCGCCAGTGGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGTGGCCCAGGGTCCATaGGGGGCACCGCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGVAQGP*GAPLCS
Trigger: GCTGCAGAGCGGTGCCCCCAATGGACCCTGGGCCAC...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCAGCCCTGATGAGAGACTCGTaGTCTTTGCTGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QFIGSPEGRRHRGGGSSALMRDS*SLLKPG
Trigger: CCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAG...GGCTGAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS TCA 90 bp GAAGCCCGTGGAGACAGACACGCGCAGACGGACGACCTCATGCAGTaGCAGGCACAGACAAACGCAGGGACGACTTTCACAGACGGACGG +
Preference number: 5 (lower is better)
Translates to: EARGDRHAQTDDLMQ*QAQTNAGTTFTDGR
Trigger: CCGTCCGTCTGTGAAAGTCGTCCCTGCGTTTGTCTGTGCCTGTCACTGCATGAGGTCGTCCGTCTGCGCGTGTCTGTCTCCACGGGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CCA 90 bp CAGCACCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: QHLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000430554.1
ENST00000454485.5
CDS CCA 90 bp AGCCAGCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: SQLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419336.6
CDS CCA 90 bp GCGTGTCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: ACLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGACACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426415.5
CDS CCA 90 bp GGATCCCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: GSLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440755.5
CDS-3UTR CAA 90 bp GTAACAGTTTATTGGCAGCCCAGAGGGGCGAAGGCACCGCGGGGGAGGGAGCTCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: VTVYWQPRGAKAPRGRELYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GAGCTCCCTCCCCCGCGGTGCCTTCGCCCCTCTGGGCTGCCAATAAACTGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000428317.7
CDS-3UTR CAA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGATCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: PVQCESLGLRRKGALGLRSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: VELVLPVHHVGAPAVELGWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp ATAGTATATACAGCTAGGGGGCCGGGCGGAGCGGAGGACATGGGGGTCCCGCCGCTGATGAGAGACTCGTaGTCTTTGCTGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: IVYTARGPGGAEDMGVPPLMRDS*SLLKPG
Trigger: CCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAG...CGGCGGGACCCCCATGTCCTCCGCTCCGCCCGGCCCCCTAGCTGTATATACTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
CDS-3UTR CAA 90 bp GGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: GRTGSSSAPCRSSSGGTRTGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...CCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS GCA 90 bp GGACAGAAGCCCGTGGAGACAGACACGCGCAGACGGACGACCTCATaGAGTGACAGGCACAGACAAACGCAGGGACGACTTTCACAGACG +
Preference number: 5 (lower is better)
Translates to: GQKPVETDTRRRTTS*SDRHRQTQGRLSQT
Trigger: CGTCTGTGAAAGTCGTCCCTGCGTTTGTCTGTGCCTGTCACTGCATGAGGTCGTCCGTCTGCGCGTGTCTGTCTCCACGGGCTTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CCA 90 bp CACAGACAAACGCAGGGACGACTTTCACAGACGGACGGACACACTTaGACACCCTGTCGGTCTCGCTCGAGGCTGAGAAGGCAGGACAGC +
Preference number: 5 (lower is better)
Translates to: HRQTQGRLSQTDGHT*TPCRSRSRLRRQDS
Trigger: GCTGTCCTGCCTTCTCAGCCTCGAGCGAGACCGACAGGGTGTCCAAGTGTGTCCGTCCGTCTGTGAAAGTCGTCCCTGCGTTTGTCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS-3UTR CAA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCTCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: VELVLPVHHVGAPAVELGSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTTCCAGGAGACCCACATaGCCCGGGGCCTCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCSRRPT*PGASRL
Trigger: GAGCCGAGAGGCCCCGGGCAATGTGGGTCTCCTGGA...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CGTGTCGGTGGCGCTGAGCAATTTGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGATGAGAGACTCGTaGTCTTTGCTGAAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RVGGAEQFGEEAVPEGAGLMRDS*SLLKPG
Trigger: CCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAG...GCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454485.5
CDS-3UTR CAA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTGGGTCTCGGGGCTCATaGGGATCCCCTGTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCGSRGS*GSPVRA
Trigger: TGCCCGCACAGGGGATCCCAATGAGCCCCGAGACCC...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS TCA 90 bp ATATTGGTAGCAGACACTCTGGAAGGTTGTAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCC +
Preference number: 5 (lower is better)
Translates to: ILVADTLEGCSVYHP*PRLLGLRWQKATGS
Trigger: GGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCTACAACCTTCCAGAGTGTCTGCTACCAATAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 90 bp AGTTACCTGCAGGCCGTGGAAGTCTCCCGCGTTGATGAGGGCCTCTaGGGTGTCACTGAGGAAGTCTCCATCTACCACAGGCACGAAGGA +
Preference number: 5 (lower is better)
Translates to: SYLQAVEVSRVDEGL*GVTEEVSIYHRHEG
Trigger: TCCTTCGTGCCTGTGGTAGATGGAGACTTCCTCAGTGACACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCACGGCCTGCAGGTAACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651875.1
CDS-3UTR CAA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCCCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: VELVLPVHHVGAPAVELGPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTTGGAAGTCTCCCGCGTaGATGAGGGCCTCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGWKSPA*MRASGV
Trigger: CACCCCAGAGGCCCTCATCAACGCGGGAGACTTCCA...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CTGAGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCAACGGGGCACACGACATaGTGGTCGCCCACCACATCG +
Preference number: 5 (lower is better)
Translates to: LSSDPACCSGRTGSSSAPTGHTT*WSPTTS
Trigger: CGATGTGGTGGGCGACCACAATGTCGTGTGCCCCGT...TGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000442452.1
CDS-3UTR CAA 90 bp GCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: AVVVELVLPVHHVGAPAVVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...CACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp AGCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: SSDPACCSGRTGSSSAPCPDQGC*GSGGRK
Trigger: CTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGG...ACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000454485.5
CDS-3UTR CAA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGATCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAACTCGGCTATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: VELVLPVHHVGAPAVELGYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...GCCGAGTTCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp TGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTAGAGACTCGTTGTCTTaGCTGAAGCCTGGGGCCCCG +
Preference number: 5 (lower is better)
Translates to: CCSGRTGSSSAPCRSSSGRDSLS*LKPGAP
Trigger: CGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCT...ACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000454485.5
CDS-3UTR CAA 90 bp TGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCAGCGGTGGAGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: CSGRTGSSSAPCRSSSGGVALSN*GRKRFQ
Trigger: CTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCAC...TCCACCGCTGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS CCA 90 bp GAACTCGGCCCGGCTGATGAGAGACTCGTTGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAAATACGAGCCCTCATCCTTCACCAC +
Preference number: 5 (lower is better)
Translates to: ELGPADERLVVFAEA*GPVNQKIRALILHH
Trigger: GTGGTGAAGGATGAGGGCTCGTATTTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAGCCGGGCCGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000430554.1
ENST00000454485.5
ENST00000651875.1
CDS-3UTR CAA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTATCGCTCAGCTCACGGTaGGGGTTCCACATCTCGGTG +
Preference number: 5 (lower is better)
Translates to: AAILLAVVVELVLPVHHVSLSSR*GFHISV
Trigger: CACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGA...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp GCAGCGATCCTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTACCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: AAILLAVVVELVLPVHHVPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...TACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAGGATCGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCACCGGAAGACGCTTTCTaGAGGCAGCACGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPPEDAF*RQHVPF
Trigger: GAATGGCACGTGCTGCCTCAAGAAAGCGTCTTCCGG...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS-3UTR CAA 90 bp CCTGTCCAGTGTGAGTCTCTCGGTTTGAGGAGGAAGGGAGCACTAGGTCTGAGAGGCTGTAACAGTTTATaGGCAGCCCAGAGGGGCGAA +
Preference number: 5 (lower is better)
Translates to: PVQCESLGLRRKGALGLRGCNSL*AAQRGE
Trigger: TTCGCCCCTCTGGGCTGCCAATAAACTGTTACAGCC...TCTCAGACCTAGTGCTCCCTTCCTCCTCAAACCGAGAGACTCACACTGGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS-3UTR CAA 90 bp CTGCTTGCTGTAGTGGTCGAACTGGTTCTTCCAGTGCACCATGTAGGAGCTCCATATGGTGTCCACACGTaGAGGTACAGGCAGTCCTCG +
Preference number: 5 (lower is better)
Translates to: LLAVVVELVLPVHHVGAPYGVHT*RYRQSS
Trigger: CGAGGACTGCCTGTACCTCAACGTGTGGACACCATA...TGGAGCTCCTACATGGTGCACTGGAAGAACCAGTTCGACCACTACAGCAAGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000302913.8
ENST00000411582.4
ENST00000440755.5
ENST00000442452.1
ENST00000454485.5
CDS TCA 90 bp AGACAAGTAGACAGAAACAGATGGACAGACAAAGAGCCAGAGAGATaGACAGTTACAGACCCGGAACCATGGACAGAGAGAGGACGAGAT +
Preference number: 5 (lower is better)
Translates to: RQVDRNRWTDKEPER*TVTDPEPWTERGRD
Trigger: ATCTCGTCCTCTCTCTGTCCATGGTTCCGGGTCTGTAACTGTTCATCTCTCTGGCTCTTTGTCTGTCCATCTGTTTCTGTCTACTTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651875.1
CDS TCA 72 bp GGGGGAGGCCGGGCCTCGGAGCAGCCTCCCCATGGGTaGAGCCTGGGCAGGTGCTGGGAGCCTCCGAGGCGG +
Preference number: 6 (lower is better)
Translates to: GGGRASEQPPHG*SLGRCWEPPRR
Trigger: CCGCCTCGGAGGCTCCCAGCACCTGCCCAGGCTTCACCCATGGGGAGGCTGCTCCGAGGCCCGGCCTCCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS CCA 72 bp AGGTGCATGCGGCAATACCGCGCGGCGCCTGCTTCCTaGAGGCGGCCGGCTCAGGAGCCCCCGAGACCCCGC +
Preference number: 6 (lower is better)
Translates to: RCMRQYRAAPAS*RRPAQEPPRPR
Trigger: GCGGGGTCTCGGGGGCTCCTGAGCCGGCCGCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 72 bp ACGACCGAGGTGCATGCGGCAATACCGCGCGGCGCCTaGTTCCTGGAGGCGGCCGGCTCAGGAGCCCCCGAG +
Preference number: 6 (lower is better)
Translates to: TTEVHAAIPRGA*FLEAAGSGAPE
Trigger: CTCGGGGGCTCCTGAGCCGGCCGCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 72 bp GGGCTGCTGCAGCGGGGTCCCCACGACCGAGGTGCATaGGGCAATACCGCGCGGCGCCTGCTTCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: GLLQRGPHDRGA*GNTARRLLPGG
Trigger: GCCTCCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGTGGGGACCCCGCTGCAGCAGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CCA 72 bp GGGAAGGCGTGTGCAGCAGACACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGTCTGAGGCGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: GKACAADTAGAS*LQGRRRLRRPS
Trigger: GCTCGGCCGCCTCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCTTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000419336.6
ENST00000651875.1
CDS GCA 72 bp GACAGGGCTGCTGCAGCGGGGTCCCCACGACCGAGGTaGATGCGGCAATACCGCGCGGCGCCTGCTTCCTGG +
Preference number: 6 (lower is better)
Translates to: DRAAAAGSPRPR*MRQYRAAPASW
Trigger: CCAGGAAGCAGGCGCCGCGCGGTATTGCCGCATGCACCTCGGTCGTGGGGACCCCGCTGCAGCAGCCCTGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 72 bp CGCCCTCCAGGAGTTCACCCGTGTGGACAGGGCTGCTaGAGCGGGGTCCCCACGACCGAGGTGCATGCGGCA +
Preference number: 6 (lower is better)
Translates to: RPPGVHPCGQGC*SGVPTTEVHAA
Trigger: TGCCGCATGCACCTCGGTCGTGGGGACCCCGCTGCAGCAGCCCTGTCCACACGGGTGAACTCCTGGAGGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS CCA 72 bp GGGAAGGCGTGTGCAGCAGACACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGTTCCAGTGCCAGACGC +
Preference number: 6 (lower is better)
Translates to: GKACAADTAGAS*LQGRRRSSARR
Trigger: GCGTCTGGCACTGGAACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCTTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428317.7
CDS CCA 72 bp GGCGAGGCCGCACTCCGCGGCGGCAGTGGAAACTTCTaGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: GEAALRGGSGNF*NPRGWVCAGSL
Trigger: CAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCACTGCCGCCGCGGAGTGCGGCCTCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS TCA 72 bp CCCCCGCGGGTGGGTCTGTGCTGGTTCCCTGACGGGTaGCTTCGGACTTTCGTCACCAGGGTCCGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PPRVGLCWFPDG*LRTFVTRVRSG
Trigger: CCCCGACCGGACCCTGGTGACGAAAGTCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS CCA 72 bp TGCAGGACCACAGCCTCGGCTGCCAGGTCACTTACCTaGGGAACCCCGACCCGCACCCCGGCCAGGAACTCG +
Preference number: 6 (lower is better)
Translates to: CRTTASAARSLT*GTPTRTPARNS
Trigger: CGAGTTCCTGGCCGGGGTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000651875.1
CDS CCA 72 bp GGGAAGGCGTGTGCAGCAGACACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGTCTGAGAAGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: GKACAADTAGAS*LQGRRRLRRQD
Trigger: GTCCTGCCTTCTCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445236.3
CDS CCA 72 bp GGGAAGGCGTGTGCAGCAGACACTGCGGGGGCCTCATaGCTGCAGGGCAGGCGGCGTGTGACAGACAGACGG +
Preference number: 6 (lower is better)
Translates to: GKACAADTAGAS*LQGRRRVTDRR
Trigger: CCGTCTGTCTGTCACACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS TCA 72 bp CTGCGGGGGCCTCATGGCTGCAGGGCAGGCGGCGTGTaGCAGACAGACGGACAGAAGCCCGTGGAGACAGAC +
Preference number: 6 (lower is better)
Translates to: LRGPHGCRAGGV*QTDGQKPVETD
Trigger: GTCTGTCTCCACGGGCTTCTGTCCGTCTGTCTGTCACACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CCA 72 bp CGGTCGGGGCATGACATCACCAGGCCTAGCATTCATTaGCCACGCGGCTGGCAGGTGGGAGCGGCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: RSGHDITRPSIH*PRGWQVGAAWL
Trigger: GAGCCAGGCCGCTCCCACCTGCCAGCCGCGTGGCCAATGAATGCTAGGCCTGGTGATGTCATGCCCCGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS CAA 72 bp GTGCTGGGAGCCTCCGAGGCGGTGGCGCTGAGCAATTaGGGGAGGAAGCGGTTCCAGAAGGCGCAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: VLGASEAVALSN*GRKRFQKAQAW
Trigger: CCAGGCCTGCGCCTTCTGGAACCGCTTCCTCCCCAAATTGCTCAGCGCCACCGCCTCGGAGGCTCCCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS GCA 72 bp GTCGCCCACCACATCGCTCAGGGCCTCCCTCAGGCGTaGCGGGTCCTCGGGATGCAGCCAGTCTGTGTAATG +
Preference number: 6 (lower is better)
Translates to: VAHHIAQGLPQA*RVLGMQPVCVM
Trigger: CATTACACAGACTGGCTGCATCCCGAGGACCCGGCACGCCTGAGGGAGGCCCTGAGCGATGTGGTGGGCGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000651875.1
CDS GCA 72 bp AGGCGTGTGCAGCAGACACTGCGGGGGCCTCATGGCTaGAGGGCAGGCGGCGTCTGCTGGGAGAAAGAAAGG +
Preference number: 6 (lower is better)
Translates to: RRVQQTLRGPHG*RAGGVCWEKER
Trigger: CCTTTCTTTCTCCCAGCAGACGCCGCCTGCCCTGCAGCCATGAGGCCCCCGCAGTGTCTGCTGCACACGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412389.5
CDS CCA 72 bp GGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATGGGTaGCTCCGCAAAGGGGATGCCCAGGAAAGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: GLRWQKATGSHG*LRKGDAQESRD
Trigger: GTCTCTGCTTTCCTGGGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 72 bp GCTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATaGGTGGCTCCGCAAAGGGGATGCCCAGGAAAGCAG +
Preference number: 6 (lower is better)
Translates to: AWAPVAESDGVP*VAPQRGCPGKQ
Trigger: CTGCTTTCCTGGGCATCCCCTTTGCGGAGCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 72 bp CGCGGCGGCAGTGGAAACTTCTGGAACCCCCGCGGGTaGGTCTGTGCTGGTTCCCTGACGGGTGACTTCGGA +
Preference number: 6 (lower is better)
Translates to: RGGSGNFWNPRG*VCAGSLTGDFG
Trigger: TCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGAAGTTTCCACTGCCGCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS TCA 72 bp TTCCAGTGCCAGACGCCGACCGACGACAGAGCGCAGTaGCAGACGCGACCCAAAGACCTGCAGCGGCGGAGT +
Preference number: 6 (lower is better)
Translates to: FQCQTPTDDRAQ*QTRPKDLQRRS
Trigger: ACTCCGCCGCTGCAGGTCTTTGGGTCGCGTCTGTCACTGCGCTCTGTCGTCGGTCGGCGTCTGGCACTGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428317.7
CDS TCA 72 bp TCTGGAACCCCCGCGGGTGGGTCTGTGCTGGTTCCCTaGCGGGTGACTTCGGACTTTCGTCACCAGGGTCCG +
Preference number: 6 (lower is better)
Translates to: SGTPAGGSVLVP*RVTSDFRHQGP
Trigger: CGGACCCTGGTGACGAAAGTCCGAAGTCACCCGTCAGGGAACCAGCACAGACCCACCCGCGGGGGTTCCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441605.2
ENST00000445236.3
CDS CCA 72 bp CGTAGGGGAAGAGGCCGTGTTCACAGCCGCCGGAGGTaGGAGAGGAAGAGGAGGAGAAGCTGGTGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RRGRGRVHSRRR*ERKRRRSWWRR
Trigger: CCTCCTCCACCAGCTTCTCCTCCTCTTCCTCTCCCACCTCCGGCGGCTGTGAACACGGCCTCTTCCCCTACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302913.8
ENST00000411582.4
CDS GCA 72 bp TGGAAGGTTGTAGCGTCTACCACCCCTGACCAAGGCTaGTTGGGCTCCGGTGGCAGAAAGCGACGGGGTCCC +
Preference number: 6 (lower is better)
Translates to: WKVVASTTPDQG*LGSGGRKRRGP
Trigger: GGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCTACAACCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS GCA 72 bp CAGCCAGTCTGTGTAATGCAGGACCACAGCCTCGGCTaGCAGGTCACTTACCTGGGGAACCCCGACCCGCAC +
Preference number: 6 (lower is better)
Translates to: QPVCVMQDHSLG*QVTYLGNPDPH
Trigger: GTGCGGGTCGGGGTTCCCCAGGTAAGTGACCTGGCAGCCGAGGCTGTGGTCCTGCATTACACAGACTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000651875.1
CDS CCA 72 bp CAGGCGGCGTGTGACAGACAGACGGACAGAAGCCCGTaGAGACAGACACGCGCAGACGGACGACCTCATGCA +
Preference number: 6 (lower is better)
Translates to: QAACDRQTDRSP*RQTRADGRPHA
Trigger: TGCATGAGGTCGTCCGTCTGCGCGTGTCTGTCTCCACGGGCTTCTGTCCGTCTGTCTGTCACACGCCGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CAA 90 bp ACACTCTGGAAGGTTGTAGCGTCTACCACCCCTGACCAAGGCTGCTaGGGCTCCGGTGGCAGAAAGCGACGGGGTCCCATGGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: TLWKVVASTTPDQGC*GSGGRKRRGPMGGS
Trigger: GGAGCCACCCATGGGACCCCGTCGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCTACAACCTTCCAGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS TCA 72 bp GCAGACACTCTGGAAGGTTGTAGCGTCTACCACCCCTaGCCAAGGCTGCTTGGGCTCCGGTGGCAGAAAGCG +
Preference number: 6 (lower is better)
Translates to: ADTLEGCSVYHP*PRLLGLRWQKA
Trigger: CGCTTTCTGCCACCGGAGCCCAAGCAGCCTTGGTCAGGGGTGGTAGACGCTACAACCTTCCAGAGTGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS GCA 72 bp CCCGTGGAGACAGACACGCGCAGACGGACGACCTCATaGAGTGACAGGCACAGACAAACGCAGGGACGACTT +
Preference number: 6 (lower is better)
Translates to: PVETDTRRRTTS*SDRHRQTQGRL
Trigger: AAGTCGTCCCTGCGTTTGTCTGTGCCTGTCACTGCATGAGGTCGTCCGTCTGCGCGTGTCTGTCTCCACGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CCA 72 bp ACGCAGGGACGACTTTCACAGACGGACGGACACACTTaGACACCCTGTCGGTCTCGCTCGAGGCTGAGAAGG +
Preference number: 6 (lower is better)
Translates to: TQGRLSQTDGHT*TPCRSRSRLRR
Trigger: CCTTCTCAGCCTCGAGCGAGACCGACAGGGTGTCCAAGTGTGTCCGTCCGTCTGTGAAAGTCGTCCCTGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CAA 90 bp GCACAGACAAACGCAGGGACGACTTTCACAGACGGACGGACACACTaGGACACCCTGTCGGTCTCGCTCGAGGCTGAGAAGGCAGGACAG +
Preference number: 6 (lower is better)
Translates to: AQTNAGTTFTDGRTH*DTLSVSLEAEKAGQ
Trigger: CTGTCCTGCCTTCTCAGCCTCGAGCGAGACCGACAGGGTGTCCAAGTGTGTCCGTCCGTCTGTGAAAGTCGTCCCTGCGTTTGTCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS CAA 72 bp AACGCAGGGACGACTTTCACAGACGGACGGACACACTaGGACACCCTGTCGGTCTCGCTCGAGGCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: NAGTTFTDGRTH*DTLSVSLEAEK
Trigger: CTTCTCAGCCTCGAGCGAGACCGACAGGGTGTCCAAGTGTGTCCGTCCGTCTGTGAAAGTCGTCCCTGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS TCA 72 bp GGAGACAGACACGCGCAGACGGACGACCTCATGCAGTaGCAGGCACAGACAAACGCAGGGACGACTTTCACA +
Preference number: 6 (lower is better)
Translates to: GDRHAQTDDLMQ*QAQTNAGTTFT
Trigger: TGTGAAAGTCGTCCCTGCGTTTGTCTGTGCCTGTCACTGCATGAGGTCGTCCGTCTGCGCGTGTCTGTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441605.2
CDS GCA 72 bp CCTCGCTCAGCTCACGGTTGGGGTTCCACATCTCGGTaGCCTCAAAACCTGGGTATAGGGTGTCCACATATT +
Preference number: 6 (lower is better)
Translates to: PRSAHGWGSTSR*PQNLGIGCPHI
Trigger: AATATGTGGACACCCTATACCCAGGTTTTGAGGGCACCGAGATGTGGAACCCCAACCGTGAGCTGAGCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000419336.6
ENST00000426415.5
ENST00000428317.7
ENST00000430554.1
ENST00000440755.5
ENST00000441605.2
ENST00000454485.5
ENST00000651875.1
CDS CCA 72 bp CCGGCTGATGAGAGACTCGTTGTCTTTGCTGAAGCCTaGGGCCCCGTAAACCAGAAAATACGAGCCCTCATC +
Preference number: 6 (lower is better)
Translates to: PADERLVVFAEA*GPVNQKIRALI
Trigger: GATGAGGGCTCGTATTTTCTGGTTTACGGGGCCCCAGGCTTCAGCAAAGACAACGAGTCTCTCATCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000241069.11
ENST00000302913.8
ENST00000411582.4
ENST00000412389.5
ENST00000428317.7
ENST00000430554.1
ENST00000454485.5
ENST00000651875.1