RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACBD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000230124

Ensembl transcript IDs: ENST00000367595.4, ENST00000440959.2, ENST00000475338.2, ENST00000622400.1, ENST00000642319.1, ENST00000645415.1

Found 743 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGTGGTGCAGGAGTCAGTGCCATGAGAGTGGGGACCTCTCCACTCTaGTGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGC +
Preference number: 1 (lower is better)
Translates to: RGAGVSAMRVGTSPL*CPLCLALSCLQQAG
Trigger: GCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTGCACCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GACACCTTCTGGGGCACACAGGTGAGCAAGCACAGAGAGCAGAGCTaGCCAGGCCAGCTGCTGACTTTATTCCGTGTGTCCTCCAGGGGC +
Preference number: 1 (lower is better)
Translates to: DTFWGTQVSKHREQS*PGQLLTLFRVSSRG
Trigger: GCCCCTGGAGGACACACGGAATAAAGTCAGCAGCTGGCCTGGGCAGCTCTGCTCTCTGTGCTTGCTCACCTGTGTGCCCCAGAAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp GAAACTGTTTTGCAGCCTGTCACCTCCTCTGGCAGGCAGCCATCCTaGTCTCGGAGAGTGGGGTCAGCACCAGACTGGAGCAGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: ETVLQPVTSSGRQPS*SRRVGSAPDWSSSS
Trigger: AGAGCTGCTGCTCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR CCA 90 bp CCGCTGCAGCACCAAAGAAACTGTTTTGCAGCCTGTCACCTCCTCTaGCAGGCAGCCATCCTGGTCTCGGAGAGTGGGGTCAGCACCAGA +
Preference number: 1 (lower is better)
Translates to: PLQHQRNCFAACHLL*QAAILVSESGVSTR
Trigger: TCTGGTGCTGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGGTGCTGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR CCA 90 bp GGCAGGCAGCCATCCTGGTCTCGGAGAGTGGGGTCAGCACCAGACTaGAGCAGCAGCTCTACAATATCCAGAAACTCACAGGCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: GRQPSWSRRVGSAPD*SSSSTISRNSQAEA
Trigger: TGCCTCTGCCTGTGAGTTTCTGGATATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR CCA 90 bp AGCCTGTCACCTCCTCTGGCAGGCAGCCATCCTGGTCTCGGAGAGTaGGGTCAGCACCAGACTGGAGCAGCAGCTCTACAATATCCAGAA +
Preference number: 1 (lower is better)
Translates to: SLSPPLAGSHPGLGE*GQHQTGAAALQYPE
Trigger: TTCTGGATATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCCAGAGGAGGTGACAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR TCA 90 bp GGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTaGCCCATGCTTGGCTGCAAGGCAGCTGCCATCCTTGGGCATCTT +
Preference number: 1 (lower is better)
Translates to: GLGWPLDIRLPYWCV*PMLGCKAAAILGHL
Trigger: AAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp AAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTGGCAGGCAGCCATCCTGGTCTCGGA +
Preference number: 1 (lower is better)
Translates to: KPCQLCAAAAPKKLF*SLSPPLAGSHPGLG
Trigger: TCCGAGACCAGGATGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR GCA 90 bp CTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTGTTaGCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTC +
Preference number: 1 (lower is better)
Translates to: LLHSSSASQDQGRPC*PLDFQGGSELLAQV
Trigger: GACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp AGAAAGGACTGCTGTCCTCACTTTTCAGTGGCTTGGGAAGGCCCGTaGTGCAGGAGTCAGTGCCATGAGAGTGGGGACCTCTCCACTCTG +
Preference number: 1 (lower is better)
Translates to: RKDCCPHFSVAWEGP*CRSQCHESGDLSTL
Trigger: CAGAGTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTGAGGACAGCAGTCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp ACTGAGGCTGAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCAATTGCTTGT +
Preference number: 1 (lower is better)
Translates to: TEAELSSPGPPLQIA*VVPLVHSVPSSIAC
Trigger: ACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGCTACTCAGCTCAGCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp AGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTaGTTAGGGGCTTGGCTGCTCAGTGCTTTGGTAGCACAAGGTGAC +
Preference number: 1 (lower is better)
Translates to: RALGTLACWVSPLLF*LGAWLLSALVAQGD
Trigger: GTCACCTTGTGCTACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp ACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTaGCTGCTCAGTGCTTTGGTAGCACAAGGTGACTGTGATAGGCCC +
Preference number: 1 (lower is better)
Translates to: TLACWVSPLLFCLGA*LLSALVAQGDCDRP
Trigger: GGGCCTATCACAGTCACCTTGTGCTACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp ATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTGTTGCCCTCTaGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACT +
Preference number: 1 (lower is better)
Translates to: IPLVPPKIRAGRVAL*TSKGEVSYWPKSLT
Trigger: AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp AGATCAGGGCAGGCCGTGTTGCCCTCTGGACTTCCAAGGGGGAAGTaGGTTACTGGCCCAAGTCACTCACTCATCAAGAACACTGAAGCC +
Preference number: 1 (lower is better)
Translates to: RSGQAVLPSGLPRGK*VTGPSHSLIKNTEA
Trigger: GGCTTCAGTGTTCTTGATGAGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATaGTTGGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTTCCTGGT +
Preference number: 1 (lower is better)
Translates to: VGLWISGCHIGVSDP*LAARQLPSLGIFPG
Trigger: ACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp GCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTaGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTTCCTGGTCATG +
Preference number: 1 (lower is better)
Translates to: ASGYQAAILVCLTHA*LQGSCHPWASFLVM
Trigger: CATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp CTGCTCAGTGCTTTGGTAGCACAAGGTGACTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTCCAACTGGTGTGTCTCACACAATGC +
Preference number: 1 (lower is better)
Translates to: LLSALVAQGDCDRPP*PLGTLLQLVCLTQC
Trigger: GCATTGTGTGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACAGTCACCTTGTGCTACCAAAGCACTGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp ACAGAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTaGCTGTTCACCTTCACAGCTCTGGCAAGAACTCATGAGGATGTG +
Preference number: 1 (lower is better)
Translates to: TEGRASGATLNMTST*LFTFTALARTHEDV
Trigger: CACATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGCAAGGCAGCTaGCATCCTTGGGCATCTTTCCTGGTCATGTGTGTTCCTTTTAAG +
Preference number: 1 (lower is better)
Translates to: AAILVCLTHAWLQGS*HPWASFLVMCVPFK
Trigger: CTTAAAAGGAACACACATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GACTTTACAGCCCACGAGTGGGTTCTGACCTATAGTTTAGAAACCTaGTTAGACACTGTTGGGTGTGCAAGCTCACCCCTGGCTGTGAGC +
Preference number: 1 (lower is better)
Translates to: DFTAHEWVLTYSLET*LDTVGCASSPLAVS
Trigger: GCTCACAGCCAGGGGTGAGCTTGCACACCCAACAGTGTCTAAGCAGGTTTCTAAACTATAGGTCAGAACCCACTCGTGGGCTGTAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp GAAGCTCCGCAGTCGGTGTTCCATTGCTTTCCTGTCCTTTCCCCTTaGGCCCAGGATTCTACTCAGCAAAGACGGGTGGAAAAGAAGTAT +
Preference number: 1 (lower is better)
Translates to: EAPQSVFHCFPVLSP*AQDSTQQRRVEKKY
Trigger: ATACTTCTTTTCCACCCGTCTTTGCTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGAAAGCAATGGAACACCGACTGCGGAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp GACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCAAGAACTCATaGGGATGTGTGAGCAGAGTGTTTGTCATGACAGGGACGTGTGGA +
Preference number: 1 (lower is better)
Translates to: DFNLAVHLHSSGKNS*GCVSRVFVMTGTCG
Trigger: TCCACACGTCCCTGTCATGACAAACACTCTGCTCACACATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTaGTTTCCTGTCCTTTCCCCTTGGGCCCAGGATTCTACTCAGCAA +
Preference number: 1 (lower is better)
Translates to: AKSGEQMEAPQSVFH*FPVLSPWAQDSTQQ
Trigger: TTGCTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGAAAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTaGCTTCTTCAATTGCTTGTATCATTTATTCCACAAGACAGGCTG +
Preference number: 1 (lower is better)
Translates to: DHRCRLPESSPWCTV*LLQLLVSFIPQDRL
Trigger: CAGCCTGTCTTGTGGAATAAATGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp GTAGCCCTGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTaGACAGTGTGCCTTCTTCAATTGCTTGTATCATTTATTCCACAA +
Preference number: 1 (lower is better)
Translates to: VALDHRCRLPESSPW*TVCLLQLLVSFIPQ
Trigger: TTGTGGAATAAATGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp TGTGTCCTCCAGGGGCACTGTGGAGAAAAGGGCAGTATGCCTAAGTaGTGGGAGAGGAAACAAACCTTTACATTCACCTGTGCTTCCGAA +
Preference number: 1 (lower is better)
Translates to: CVLQGHCGEKGSMPK*WERKQTFTFTCASE
Trigger: TTCGGAAGCACAGGTGAATGTAAAGGTTTGTTTCCTCTCCCAGCACTTAGGCATACTGCCCTTTTCTCCACAGTGCCCCTGGAGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp TTGGTGTGTCTGACCCATGCTTGGCTGCAAGGCAGCTGCCATCCTTaGGCATCTTTCCTGGTCATGTGTGTTCCTTTTAAGGATCGAAAG +
Preference number: 1 (lower is better)
Translates to: LVCLTHAWLQGSCHP*ASFLVMCVPFKDRK
Trigger: CTTTCGATCCTTAAAAGGAACACACATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp TCCATTATTTTCAATGGAAGTCCTCCGCTGATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGA +
Preference number: 1 (lower is better)
Translates to: SIIFNGSPPLIPRRL*DHTRALFPWGSSGR
Trigger: TCTCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCATTGAAAATAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 90 bp TTATTCCGTGTGTCCTCCAGGGGCACTGTGGAGAAAAGGGCAGTATaGCTAAGTGCTGGGAGAGGAAACAAACCTTTACATTCACCTGTG +
Preference number: 1 (lower is better)
Translates to: LFRVSSRGTVEKRAV*LSAGRGNKPLHSPV
Trigger: CACAGGTGAATGTAAAGGTTTGTTTCCTCTCCCAGCACTTAGGCATACTGCCCTTTTCTCCACAGTGCCCCTGGAGGACACACGGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp GTACGCCAATGTGAATTTCCATTATTTTCAATGGAAGTCCTCCGCTaGTTCCTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCT +
Preference number: 1 (lower is better)
Translates to: VRQCEFPLFSMEVLR*FLEGCETTLGHCFP
Trigger: AGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCATTGAAAATAATGGAAATTCACATTGGCGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp CAGCAGCAAGCAGGAGAAGGAGAGCTCTGCAGAGGATGCATGTTATaGATCCTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTA +
Preference number: 1 (lower is better)
Translates to: QQQAGEGELCRGCML*ILRLFAKNHNCSQV
Trigger: TACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCTCCTTCTCCTGCTTGCTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 90 bp GAATCCTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTaGGTTCTCAAATGTGGAAGGTCTTCTTTTAGGCTTCTTGGCAGG +
Preference number: 1 (lower is better)
Translates to: ESSGCLQRIITVLRY*VLKCGRSSFRLLGR
Trigger: CCTGCCAAGAAGCCTAAAAGAAGACCTTCCACATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 90 bp AAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTaGCTACTATTGTTTCTAAGAGAGGGTTTTCTTGAATGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: KVLSQHQHMVGANTC*LLLFLREGFLEWKE
Trigger: TTCTTTCCATTCAAGAAAACCCTCTCTTAGAAACAATAGTAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCAGCTCACGGGTGGTTaGGCTCAGGGCTTGACCCCA +
Preference number: 2 (lower is better)
Translates to: VSVAGAPESLPFGFRASGQLTGG*AQGLTP
Trigger: TGGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCAGGAGTCAGTGCCATaGGAGTGGGGACCTCTCCAC +
Preference number: 2 (lower is better)
Translates to: VSVAGAPESLPFGFRASGQESVP*EWGPLH
Trigger: GTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGGTGTGTCTGACCCATaGTTGGCTGCAAGGCAGCTG +
Preference number: 2 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFGVSDP*LAARQL
Trigger: CAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGGGTCCTGGGGGCTTTaGGTTTGTGGTGGACGCCCC +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPGSWGL*VCGGRP
Trigger: GGGGCGTCCACCACAAACCCAAAGCCCCCAGGACCC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGTTGGGCTCAGGGCTTaGCCCCAGGGCTTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPVGLRA*PQGFCQ
Trigger: CTGGCAAAAGCCCTGGGGTCAAGCCCTGAGCCCAAC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGGGTGGAAGGTATCCTaGGTGACATCAGCTCACGGG +
Preference number: 2 (lower is better)
Translates to: VSVAGAPESLPFGFRASGGWKVS*VTSAHG
Trigger: CCCGTGAGCTGATGTCACTCAGGATACCTTCCACCC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGATGCCAGCACTCCTGTaGCCTCCGGGGATCCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRMPALL*PPGIPG
Trigger: GCCTGGGATCCCCGGAGGGCACAGGAGTGCTGGCAT...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCCTGTCCTTTCCCCTTaGGCCCAGGATTCTACTCAG +
Preference number: 2 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSPVLSP*AQDSTQ
Trigger: CTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCAGGGCATTGTTTCCCTaGGGAAGCAGTGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSRALFP*GSSGRA
Trigger: TGCTCTCCCACTGCTTCCCCAGGGAAACAATGCCCT...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGCCTGGGGAGAGGGGGTaGGGCGCATCGCACTCCCAG +
Preference number: 2 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGPGERG*GASHSQ
Trigger: CTGGGAGTGCGATGCGCCCCACCCCCTCTCCCCAGG...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTACATCAGCTCACGGGTaGTTGGGCTCAGGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: LHSDVPCASRCPAYSRQATSAHG*LGSGLD
Trigger: GTCAAGCCCTGAGCCCAACCACCCGTGAGCTGATGT...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGAGCCTGCCCGGCACGTaGGGGAGCAGCTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGSLPGT*GSSCPQ
Trigger: CTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCT...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGCCTGGTCTCGGAGAGTaGGGTCAGCACCAGACTGGA +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPPGLGE*GQHQTG
Trigger: TCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGG...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGGCAGGCAGCCATCCTaGTCTCGGAGAGTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRGRQPS*SRRVGS
Trigger: TGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACCCTGGGGAGAGGGGGTaGGGCGCATCGCACTCCCAG +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNPGERG*GASHSQ
Trigger: CTGGGAGTGCGATGCGCCCCACCCCCTCTCCCCAGG...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCCCATATTGGTGTGTCTaGCCCATGCTTGGCTGCAAG +
Preference number: 2 (lower is better)
Translates to: EGVGRIALPDLCSIQASVPYWCV*PMLGCK
Trigger: CTTGCAGCCAAGCATGGGTCAGACACACCAATATGG...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGCTGAAGACAGAGTTCTaGGGCCCACCTGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRLKTEF*GPPGER
Trigger: CCTCTCCCCAGGTGGGCCTCAGAACTCTGTCTTCAG...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGGACCTCTCCACTCTaGTGTCCCCTGTGCCTCGCG +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAGTSPL*CPLCLA
Trigger: CGCGAGGCACAGGGGACATCAGAGTGGAGAGGTCCC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCACCACCGCTGCAGATTaGCTGAGTCGTCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCTTAAD*LSRPLG
Trigger: ACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGT...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGCCCTGGACCACCGCTaGAGATTGCCTGAGTCGTCC +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTALDHR*RLPESS
Trigger: GGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GCAGCTGCTGCAGATAGGCCGAAGCCAGTAAGCAGTGGTTTTTCCTaGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCA +
Preference number: 2 (lower is better)
Translates to: AAAADRPKPVSSGFS*QMTQRLELSGPGPP
Trigger: TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACCACTGCTTACTGGCTTCGGCCTATCTGCAGCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGTTGGGCTCAGGGCTTaGCCCCAGGGCTTTTGCCAG +
Preference number: 2 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGVGLRA*PQGFCQ
Trigger: CTGGCAAAAGCCCTGGGGTCAAGCCCTGAGCCCAAC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGAGCCTGCCCGGCACGTaGGGGAGCAGCTGTCCTCAG +
Preference number: 2 (lower is better)
Translates to: SGATLNMTSTWLFTFTALSLPGT*GSSCPQ
Trigger: CTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCT...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCGCCTTGCCAGTTGTGTaGCGCTGCAGCACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCALPVV*RCSTKE
Trigger: TTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGC...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR GCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGCCCTGGACCACCGCTaGAGATTGCCTGAGTCGTCC +
Preference number: 2 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDALDHR*RLPESS
Trigger: GGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGCAGGCAGGCTTAGGTaGAGAAAGGATGGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPAGRLR*RKDGRE
Trigger: CTCCCTTCCATCCTTTCTGCACCTAAGCCTGCCTGC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCTTTACATTCACCTGTaGTTCCGAACACACGCACGC +
Preference number: 2 (lower is better)
Translates to: VSVAGAPESLPFGFRASGLYIHL*FRTHAR
Trigger: GCGTGCGTGTGTTCGGAAGCACAGGTGAATGTAAAG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGCCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: NTALTRTETPKVEASQPLPLQIA*VVPLVH
Trigger: GTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGG...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGAGTCGTCCCCTTGGTaGACAGTGTGCCTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPESSPW*TVCLLQ
Trigger: TTGAAGAAGGCACACTGTGCACCAAGGGGACGACTC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTCTCCCCTGCTGTTCTaGTTAGGGGCTTGGCTGCTC +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTSPLLF*LGAWLL
Trigger: GAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGA...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGCAGGGCGGCACCGCTaGGGGCAGTTCTATAAGAGC +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNAGRHR*GQFYKS
Trigger: GCTCTTATAGAACTGCCCCCAGCGGTGCCGCCCTGC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACCCGCCTAGGGGGTCCTaGGGGCTTTGGGTTTGTGGT +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNPPRGS*GLWVCG
Trigger: ACCACAAACCCAAAGCCCCCAGGACCCCCTAGGCGG...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCTGAAGACAGAGTTCTaGGGCCCACCTGGGGAGAGG +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGLKTEF*GPPGER
Trigger: CCTCTCCCCAGGTGGGCCTCAGAACTCTGTCTTCAG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGGTGGAAGGTATCCTaGGTGACATCAGCTCACGGG +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAGWKVS*VTSAHG
Trigger: CCCGTGAGCTGATGTCACTCAGGATACCTTCCACCC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTCTGGCAAGAACTCATaGGGATGTGTGAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPSGKNS*GCVSRV
Trigger: CACTCTGCTCACACATCCTCATGAGTTCTTGCCAGA...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGCCCAGGCCAGCTGCTaGCTTTATTCCGTGTGTCCT +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAAQASC*LYSVCP
Trigger: AGGACACACGGAATAAAGTCAGCAGCTGGCCTGGGC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACTGCCTCGCGCTGTCCTaGCTACAGCAGGCAGGCTTA +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNCLALS*LQQAGL
Trigger: TAAGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCA...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCAGGGCATTGTTTCCCTaGGGAAGCAGTGGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTRALFP*GSSGRA
Trigger: TGCTCTCCCACTGCTTCCCCAGGGAAACAATGCCCT...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCTTGGGCATCTTTCCTaGTCATGTGTGTTCCTTTTA +
Preference number: 2 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSLGHLS*SCVFLL
Trigger: TAAAAGGAACACACATGACCAGGAAAGATGCCCAAG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGGGCAGCTGCCATCCTTaGGCATCTTTCCTGGTCATG +
Preference number: 2 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQGSCHP*ASFLVM
Trigger: CATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCC...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACCTCCAGGGGCACTGTaGAGAAAAGGGCAGTATGCC +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAPPGAL*RKGQYA
Trigger: GGCATACTGCCCTTTTCTCCACAGTGCCCCTGGAGG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTaGGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTTCCTGGTCAT +
Preference number: 2 (lower is better)
Translates to: GLWISGCHIGVSDPC*AARQLPSLGIFPGH
Trigger: ATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp TTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATaGGTGTGTCTGACCCATGCTTGGCTGCAAGGCAGCTGCCATCCT +
Preference number: 2 (lower is better)
Translates to: FSPWPGLASGYQAAI*VCLTHAWLQGSCHP
Trigger: AGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp TGGGAGACTCCTGATGAGACAGAGGGGAGGGCATCTGGGGCGACTTaGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCA +
Preference number: 2 (lower is better)
Translates to: WETPDETEGRASGAT*NMTSTWLFTFTALA
Trigger: TGCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTCTGTCTCATCAGGAGTCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTTCTCATCTGGGCTGTTaGAGTCAACACCAAACATTT +
Preference number: 2 (lower is better)
Translates to: LHSDVPCASRCPAYSRQASHLGC*SQHQTF
Trigger: AAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGA...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGGCTTTTGCCAGAACTaGAGACAGAGTTCTGAGGCC +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTGFCQN*RQSSEA
Trigger: GGCCTCAGAACTCTGTCTTCAGTTCTGGCAAAAGCC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACATGCCAGCACTCCTGTaGCCTCCGGGGATCCCAGGC +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNMPALL*PPGIPG
Trigger: GCCTGGGATCCCCGGAGGGCACAGGAGTGCTGGCAT...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACTGGTGCAGGAGTCAGTaGCATGAGAGTGGGGACCTC +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNWCRSQ*HESGDL
Trigger: GAGGTCCCCACTCTCATGGCACTGACTCCTGCACCA...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCAATCAGGAGAACAAATaGAAGCTCCGCAGTCGGTGT +
Preference number: 2 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCNQENK*KLRSRC
Trigger: ACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATT...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCACATCAGCTCACGGGTaGTTGGGCTCAGGGCTTGAC +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGTSAHG*LGSGLD
Trigger: GTCAAGCCCTGAGCCCAACCACCCGTGAGCTGATGT...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTGTCCTCACTTTTCAGTaGCTTGGGAAGGCCCGTGGT +
Preference number: 2 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTVLTFQ*LGKARG
Trigger: ACCACGGGCCTTCCCAAGCCACTGAAAAGTGAGGAC...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTG +
Preference number: 2 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQIPRRL*DHTRAL
Trigger: CAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAAT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGGAAGGTATCCTGAGTaGCATCAGCTCACGGGTGGT +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNGRYPE*HQLTGG
Trigger: ACCACCCGTGAGCTGATGTCACTCAGGATACCTTCC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGGCCTTTGGGAACTTTaGTCCAACTGGTGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTGLWEL*SNWCVS
Trigger: TGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTGGCTGCAAGGCAGCTaGCATCCTTGGGCATCTTTC +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGWLQGS*HPWASF
Trigger: GAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGATCAGTCAGTGTGTTaGCCAGAACATTCCTTAGAC +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPDQSVC*PEHSLD
Trigger: GTCTAAGGAATGTTCTGGGCAACACACTGACTGATC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGCCTGGGTTGGCCTCTaGATATCAGGCTGCCATATT +
Preference number: 2 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGAWVGL*ISGCHI
Trigger: AATATGGCAGCCTGATATCCAGAGGCCAACCCAGGC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGTTTTTCTCCTTGGCCTaGGTTGGCCTCTGGATATCA +
Preference number: 2 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRFFSLA*VGLWIS
Trigger: TGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAA...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GGAAGCTCCGCAGTCGGTGTTCCATTGCTTTCCTGTCCTTTCCCCTaGGGCCCAGGATTCTACTCAGCAAAGACGGGTGGAAAAGAAGTA +
Preference number: 2 (lower is better)
Translates to: GSSAVGVPLLSCPFP*GPGFYSAKTGGKEV
Trigger: TACTTCTTTTCCACCCGTCTTTGCTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGAAAGCAATGGAACACCGACTGCGGAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GTAGCACAAGGTGACTGTGATAGGCCCCCTTGGCCTTTGGGAACTTaGCTCCAACTGGTGTGTCTCACACAATGCCTCCCAAAACACTGC +
Preference number: 2 (lower is better)
Translates to: VAQGDCDRPPWPLGT*LQLVCLTQCLPKHC
Trigger: GCAGTGTTTTGGGAGGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACAGTCACCTTGTGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCATAATGGAAGCCTTATaGTATTACAGACTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFIMEAL*YYRLQF
Trigger: AAACTGCAGTCTGTAATAGCATAAGGCTTCCATTAT...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGCTCTGGATATCAGGCTaGCATATTGGTGTGTCTGAC +
Preference number: 2 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQLWISG*HIGVSD
Trigger: GTCAGACACACCAATATGGCAGCCTGATATCCAGAG...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTGGGAATTTAGTCTTTaGAGGTGTTTCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSWEFSL*RCFLFF
Trigger: GAAAAACAAGAAACACCTGCAAAGACTAAATTCCCA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTC +
Preference number: 2 (lower is better)
Translates to: LASGYQAAILVCLTHAWLCDRPP*PLGTLL
Trigger: GAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACA...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTC +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGCDRPP*PLGTLL
Trigger: GAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTTTCTGCTTAGGGGCTTaGCTGCTCAGTGCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTFCLGA*LLSALV
Trigger: TACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAA...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACACCACCGCTGCAGATTaGCTGAGTCGTCCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNTTAAD*LSRPLG
Trigger: ACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGT...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACTCTGGATATCAGGCTaGCATATTGGTGTGTCTGAC +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRALWISG*HIGVSD
Trigger: GTCAGACACACCAATATGGCAGCCTGATATCCAGAG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAAATCAGGAGAACAAATaGAAGCTCCGCAGTCGGTGT +
Preference number: 2 (lower is better)
Translates to: PRALGTLACWVSPLLFCLNQENK*KLRSRC
Trigger: ACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATT...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp AGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATaGCTTTCCTGTCCTTTCCCCTTGGGCCCAGGATTCTACTCAGCA +
Preference number: 2 (lower is better)
Translates to: SKIRRTNGSSAVGVP*LSCPFPLGPGFYSA
Trigger: TGCTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGAAAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGCCCATTCTCTTCATCTaGTTTCCTGTTTTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPPILFI*FPVLVL
Trigger: CAAAACTAAAACAGGAAATCAGATGAAGAGAATGGG...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTCCCTTGTGCTTGTGTaGCAGGTTTGGTTTCAGAAC +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGSLVLV*QVWFQN
Trigger: GTTCTGAAACCAAACCTGCCACACAAGCACAAGGGA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACATGACAGGGACGTGTaGAATTGGGTACATTCAATC +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAHDRDV*NWVHSI
Trigger: GATTGAATGTACCCAATTCCACACGTCCCTGTCATG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCAGTTTTCCAGTCTTTTaGTTAAGCCTTGCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: EGRASGATLNMTSTWLFTSFPVF*LSLASC
Trigger: ACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACT...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR TCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGACCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGPLQIA*VVPLVH
Trigger: GTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGG...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGAGCAGAGAAAGGACTaGTGTCCTCACTTTTCAGTG +
Preference number: 2 (lower is better)
Translates to: SGATLNMTSTWLFTFTALEQRKD*CPHFSV
Trigger: CACTGAAAAGTGAGGACAGCAGTCCTTTCTCTGCTC...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCCAGTGGGCTCCCCTCTaGCCCACGACAAGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSQWAPL*PTTSPE
Trigger: TTCTGGACTTGTCGTGGGCCAGAGGGGAGCCCACTG...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGAGTCCCTTCAGGGCAGTaGGCTCCCCTCTGGCCCACG +
Preference number: 2 (lower is better)
Translates to: NLFWFLSVPSISLTLMARVPSGQ*APLWPT
Trigger: CGTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGAC...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGCCTGAGTCGTCCCCTTaGTGCACAGTGTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWPESSP*CTVCLL
Trigger: AAGAAGGCACACTGTGCACCAAGGGGACGACTCAGG...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGAACTTTGCTCCAACTaGTGTGTCTCACACAATGCC +
Preference number: 2 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWELCSN*CVSHNA
Trigger: GGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp CCTGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTaGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTG +
Preference number: 2 (lower is better)
Translates to: PVLPNTRTRLSLYLT*NGTNQTLTNRNLSL
Trigger: CAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCCCAAAGAGAAACGCCTaGAGAAGGATGCAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSPKRNA*RRMQGG
Trigger: GCCGCCCTGCATCCTTCTTCAGGCGTTTCTCTTTGG...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTAGTCGTACAGGTGAGATaGCAGCACTCCTGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLVVQVR*QHSCAL
Trigger: GAGGGCACAGGAGTGCTGGCATCTCACCTGTACGAC...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTAGGGACACTGGCTTGTTaGGTCTCTCCCCTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLGTLAC*VSPLLF
Trigger: GAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCC...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCTTGGGCATCTTTCCTaGTCATGTGTGTTCCTTTTA +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGLGHLS*SCVFLL
Trigger: TAAAAGGAACACACATGACCAGGAAAGATGCCCAAG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGGGGCTTTGGGTTTGTaGTGGACGCCCCCTGAGTAT +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSGALGL*WTPPEY
Trigger: ATACTCAGGGGGCGTCCACCACAAACCCAAAGCCCC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAAGACTTCTGTGCAGCTaGGCTGGCAGGGGAGGGTTG +
Preference number: 2 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGRLLCS*AGRGGL
Trigger: CAACCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCT...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTCCCATTCTCTTCATCTaGTTTCCTGTTTTAGTTTTG +
Preference number: 2 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTPILFI*FPVLVL
Trigger: CAAAACTAAAACAGGAAATCAGATGAAGAGAATGGG...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACCCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTG +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNPKKLF*SLSPPL
Trigger: CAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGG...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCTGGCTGCAAGGCAGCTaGCATCCTTGGGCATCTTTC +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSWLQGS*HPWASF
Trigger: GAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCA...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGCACTCCCAGACCTGTaGTCCATTCAGGCTTCAGTC +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSALPDL*SIQASV
Trigger: GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACGAACTTTGCTCCAACTaGTGTGTCTCACACAATGCC +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNELCSN*CVSHNA
Trigger: GGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTC...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTTCCATTATTTTCAATaGAAGTCCTCCGCTGATTCC +
Preference number: 2 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGFHYFQ*KSSADS
Trigger: GGAATCAGCGGAGGACTTCCATTGAAAATAATGGAA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGGCAGCTGCCATCCTTaGGCATCTTTCCTGGTCATG +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSGSCHP*ASFLVM
Trigger: CATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp AGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCAATaGCTTGTATCATTTATTCCACAAGACAGGCTGTGGGCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: RLPESSPWCTVCLLQ*LVSFIPQDRLWAVK
Trigger: TTTTACAGCCCACAGCCTGTCTTGTGGAATAAATGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAATAATGGAAGCCTTATaGTATTACAGACTGCAGTTT +
Preference number: 2 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAIMEAL*YYRLQF
Trigger: AAACTGCAGTCTGTAATAGCATAAGGCTTCCATTAT...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGAGTCGTCCCCTTGGTaGACAGTGTGCCTTCTTCAA +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSESSPW*TVCLLQ
Trigger: TTGAAGAAGGCACACTGTGCACCAAGGGGACGACTC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGGGTCAGCACCAGACTaGAGCAGCAGCTCTACAATA +
Preference number: 2 (lower is better)
Translates to: RALQRMHVMNPQVVCKESGSAPD*SSSSTI
Trigger: TATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCCCTGTCCTTTCCCCTTaGGCCCAGGATTCTACTCAG +
Preference number: 2 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSPVLSP*AQDSTQ
Trigger: CTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGG...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACAACATGACTTCAACCTaGCTGTTCACCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNNMTST*LFTFTA
Trigger: AGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTT...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACTGCTTAGACACTGTTaGGTGTGCAAGCTCACCCCT +
Preference number: 2 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLLLRHC*VCKLTP
Trigger: AGGGGTGAGCTTGCACACCCAACAGTGTCTAAGCAG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATTTCTGGACCATCCTTATTGAACCCT +
Preference number: 2 (lower is better)
Translates to: ALTRTETPKVEASQP*SKIKVISGPSLLNP
Trigger: AGGGTTCAATAAGGATGGTCCAGAAATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTG +
Preference number: 2 (lower is better)
Translates to: RALQRMHVMNPQVVCKESIPRRL*DHTRAL
Trigger: CAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAAT...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACCAGTTGTGTGCCGCTaGAGCACCAAAGAAACTGTT +
Preference number: 2 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLPVVCR*STKETV
Trigger: AACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR GCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGACACACATGTCCTGGCTaGACAGCTGCTTCATTCCTC +
Preference number: 2 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGHTCPG*TAASFL
Trigger: GAGGAATGAAGCAGCTGTGCAGCCAGGACATGTGTG...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGCCTGAGTCGTCCCCTTaGTGCACAGTGTGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMPESSP*CTVCLL
Trigger: AAGAAGGCACACTGTGCACCAAGGGGACGACTCAGG...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAATAAAAGTGATTTCTaGACCATCCTTATTGAACCC +
Preference number: 2 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNNKSDF*TILIEP
Trigger: GGGTTCAATAAGGATGGTCCAGAAATCACTTTTATT...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCAAGGTGACATGGCTGTaGGGAAATGGGAGACTCCTG +
Preference number: 2 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSKVTWL*GNGRLL
Trigger: CAGGAGTCTCCCATTTCCCCACAGCCATGTCACCTT...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCACTTTTGATTAAGCCTTaGCAGTTGTGTGCCGCTGCA +
Preference number: 2 (lower is better)
Translates to: RALQRMHVMNPQVVCKESLLIKP*QLCAAA
Trigger: TGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAG...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR GCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCCAGTCGGTGTTCCATTaGTTTCCTGTCCTTTCCCCT +
Preference number: 2 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSQSVFH*FPVLSP
Trigger: AGGGGAAAGGACAGGAAAGCAATGGAACACCGACTG...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGAATAAAAGTGATTTCTaGACCATCCTTATTGAACCC +
Preference number: 2 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWNKSDF*TILIEP
Trigger: GGGTTCAATAAGGATGGTCCAGAAATCACTTTTATT...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGCCTGGGTTGGCCTCTaGATATCAGGCTGCCATATT +
Preference number: 2 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTAWVGL*ISGCHI
Trigger: AATATGGCAGCCTGATATCCAGAGGCCAACCCAGGC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACATGACAGGGACGTGTaGAATTGGGTACATTCAATC +
Preference number: 2 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLHDRDV*NWVHSI
Trigger: GATTGAATGTACCCAATTCCACACGTCCCTGTCATG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR TCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGCAGAGTGTTTGTCATaGCAGGGACGTGTGGAATTG +
Preference number: 2 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTAECLS*QGRVEL
Trigger: CAATTCCACACGTCCCTGTCATGACAAACACTCTGC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTGTGCCTTCTTCAATTaGTTGTATCATTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNCAFFN*LYHLFH
Trigger: GTGGAATAAATGATACAAGCAATTGAAGAAGGCACA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGACCTTGGTGCACAGTGTaGCTTCTTCAATTGCTTGTA +
Preference number: 2 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGPWCTV*LLQLLV
Trigger: TACAAGCAATTGAAGAAGGCACACTGTGCACCAAGG...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGGCCTTTGGGAACTTTaGTCCAACTGGTGTGTCTCA +
Preference number: 2 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTGLWEL*SNWCVS
Trigger: TGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTGGGAATTTAGTCTTTaGAGGTGTTTCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNWEFSL*RCFLFF
Trigger: GAAAAACAAGAAACACCTGCAAAGACTAAATTCCCA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTTCACCTTCACAGCTCTaGCAAGAACTCATGAGGATG +
Preference number: 2 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTSPSQL*QELMRM
Trigger: CATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGA...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp AGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACTATaGTTTCTAAGAGAGGGTTTTCTTGAATGGAAAGAAAGGAGAAAA +
Preference number: 2 (lower is better)
Translates to: SQHQHMVGANTCWLL*FLREGFLEWKERRK
Trigger: TTTTCTCCTTTCTTTCCATTCAAGAAAACCCTCTCTTAGAAACAATAGTAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCTGTGCCTTCTTCAATTaGTTGTATCATTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSCAFFN*LYHLFH
Trigger: GTGGAATAAATGATACAAGCAATTGAAGAAGGCACA...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGTTCCATTATTTTCAATaGAAGTCCTCCGCTGATTCC +
Preference number: 2 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMFHYFQ*KSSADS
Trigger: GGAATCAGCGGAGGACTTCCATTGAAAATAATGGAA...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGTACCTGACTTTGAATaGAACAAACCAGACTTTAAC +
Preference number: 2 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGVPDFE*NKPDFN
Trigger: GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTAC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 90 bp GAAGATATGAATTCTTTCCTACAAACCAGAGAATATGAACCTGTTTaGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAG +
Preference number: 2 (lower is better)
Translates to: EDMNSFLQTREYEPV*VFKCPIYIIDSDGK
Trigger: CTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTTCATATTCTCTGGTTTGTAGGAAAGAATTCATATCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGACCACCGCTGCAGATaGCCTGAGTCGTCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFDHRCR*PESSPW
Trigger: CCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCGCTGTTTGGCCTTCATaGTCCCTTCAGGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSAVWPS*SLQGSG
Trigger: CCCACTGCCCTGAAGGGACAATGAAGGCCAAACAGC...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CAA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTCCTGTCCTTTCCCCTaGGGCCCAGGATTCTACTCA +
Preference number: 3 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSSCPFP*GPGFYS
Trigger: TGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGTTCTGCTTAGGGGCTaGGCTGCTCAGTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFVLLRG*AAQCFG
Trigger: ACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAAC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCTCTCCTTGGCCTGGGTaGGCCTCTGGATATCAGGCT +
Preference number: 3 (lower is better)
Translates to: EGVGRIALPDLCSIQASVSPWPG*ASGYQA
Trigger: AGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGA...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp TTTGCCAGAACTGAAGACAGAGTTCTGAGGCCCACCTaGGGAGAGGGGGTGGGGCGCATCGCACTCCCAGAC +
Preference number: 3 (lower is better)
Translates to: FARTEDRVLRPT*GEGVGRIALPD
Trigger: GTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCCCAGGTGGGCCTCAGAACTCTGTCTTCAGTTCTGGCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp TCAGTGGCTTGGGAAGGCCCGTGGTGCAGGAGTCAGTaGCATGAGAGTGGGGACCTCTCCACTCTGATGTCC +
Preference number: 3 (lower is better)
Translates to: SVAWEGPWCRSQ*HESGDLSTLMS
Trigger: GGACATCAGAGTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTGCACCACGGGCCTTCCCAAGCCACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp GAGCCCAGCGACGCCAGGGCAAAGGTGACATGGCTGTaGGGAAATGGGAGACTCCTGATGAGACAGAGGGGA +
Preference number: 3 (lower is better)
Translates to: EPSDARAKVTWL*GNGRLLMRQRG
Trigger: TCCCCTCTGTCTCATCAGGAGTCTCCCATTTCCCCACAGCCATGTCACCTTTGCCCTGGCGTCGCTGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp GTGCCTCCCAAGATCAGGGCAGGCCGTGTTGCCCTCTaGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: VPPKIRAGRVAL*TSKGEVSYWPK
Trigger: CTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGATCTTGGGAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGACCACCGCTGCAGATaGCCTGAGTCGTCCCCTTGG +
Preference number: 3 (lower is better)
Translates to: EGRASGATLNMTSTWLFTDHRCR*PESSPW
Trigger: CCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTCACTTTTCAGTGGCTaGGGAAGGCCCGTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPSLFSG*GRPVVQ
Trigger: CTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTGA...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp GAGCTGAGTAGCCCTGGACCACCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCACAGTGTGCCTTCTTCA +
Preference number: 3 (lower is better)
Translates to: ELSSPGPPLQIA*VVPLVHSVPSS
Trigger: TGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGCTACTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp GGTCCTGGGGGCTTTGGGTTTGTGGTGGACGCCCCCTaGGTATGTCCCTTGTGCTTGTGTGGCAGGTTTGGT +
Preference number: 3 (lower is better)
Translates to: GPGGFGFVVDAP*VCPLCLCGRFG
Trigger: ACCAAACCTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAGCCCCCAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGTTCTGCTTAGGGGCTaGGCTGCTCAGTGCTTTGGT +
Preference number: 3 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRVLLRG*AAQCFG
Trigger: ACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAAC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTGTGTCTGACCCATGCTaGGCTGCAAGGCAGCTGCCA +
Preference number: 3 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTVSDPC*AARQLP
Trigger: TGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACAC...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTaGTTAGGGGCTTGGCTGCTCAGTGCTTTGGTAGCA +
Preference number: 3 (lower is better)
Translates to: GTLACWVSPLLF*LGAWLLSALVA
Trigger: TGCTACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGACCACACTAGGGCATaGTTTCCCTGGGGAAGCAGT +
Preference number: 3 (lower is better)
Translates to: EGRASGATLNMTSTWLFTDHTRA*FPWGSS
Trigger: ACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGGACCACACTAGGGCATaGTTTCCCTGGGGAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQDHTRA*FPWGSS
Trigger: ACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTC...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCATCACTTTTCAGTGGCTaGGGAAGGCCCGTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRASLFSG*GRPVVQ
Trigger: CTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTGA...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp CAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTGGCAGGCAGCCATCCT +
Preference number: 3 (lower is better)
Translates to: QLCAAAAPKKLF*SLSPPLAGSHP
Trigger: AGGATGGCTGCCTGCCAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGGTGCTGCAGCGGCACACAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAATTAAGCCTTGCCAGTaGTGTGCCGCTGCAGCACCA +
Preference number: 3 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAIKPCQ*CAAAAP
Trigger: TGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAAT...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CAA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGAAGAGGTGGTTTTCATaGCAGGTGACTGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRKRWFS*QVTEAE
Trigger: CTCAGCCTCAGTCACCTGCAATGAAAACCACCTCTT...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTCTCCTTGGCCTGGGTaGGCCTCTGGATATCAGGCT +
Preference number: 3 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGSPWPG*ASGYQA
Trigger: AGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp CAGGCCGTGTTGCCCTCTGGACTTCCAAGGGGGAAGTaGGTTACTGGCCCAAGTCACTCACTCATCAAGAAC +
Preference number: 3 (lower is better)
Translates to: QAVLPSGLPRGK*VTGPSHSLIKN
Trigger: GTTCTTGATGAGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp TGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATaGTTGGCTGCAAGGCAGCTGCCATCCTTGGGCATC +
Preference number: 3 (lower is better)
Translates to: WISGCHIGVSDP*LAARQLPSLGI
Trigger: GATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp TTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTaGCATATTGGTGTGTCTGACCCATGCTTGGCTGCA +
Preference number: 3 (lower is better)
Translates to: FSLAWVGLWISG*HIGVSDPCLAA
Trigger: TGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GACATTAAAGAATGCATACAAGAACTCCCCCAAGCCTaGCCGGCACGTGAGGGAGCAGCTGTCCTCAGAGAC +
Preference number: 3 (lower is better)
Translates to: DIKECIQELPQA*PAREGAAVLRD
Trigger: GTCTCTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTCTTGTATGCATTCTTTAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp CCCTCACTGTGTACACACATGTCCTGGCTGCACAGCTaGTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCA +
Preference number: 3 (lower is better)
Translates to: PSLCTHMSWLHS*FIPLVPPKIRA
Trigger: TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACATGTGTGTACACAGTGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp TGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTaGCTGCTCAGTGCTTTGGTAGCACAAGGTGACTGT +
Preference number: 3 (lower is better)
Translates to: CWVSPLLFCLGA*LLSALVAQGDC
Trigger: ACAGTCACCTTGTGCTACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCAGGTCAGTGAACACTTaGATGGCCAGTTTGATATTA +
Preference number: 3 (lower is better)
Translates to: EGVGRIALPDLCSIQASVRSVNT*MASLIL
Trigger: TAATATCAAACTGGCCATCAAAGTGTTCACTGACCT...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGTTGACCCCAGGGCTTTaGCCAGAACTGAAGACAGAG +
Preference number: 3 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGLTPGL*PELKTE
Trigger: CTCTGTCTTCAGTTCTGGCAAAAGCCCTGGGGTCAA...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGAACAGGAACTTGAGCTaGTTCACTCAAAATCTGTCT +
Preference number: 3 (lower is better)
Translates to: VSVAGAPESLPFGFRASGNRNLS*FTQNLS
Trigger: AGACAGATTTTGAGTGAACAAGCTCAAGTTCCTGTT...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GTGACTGTGATAGGCCCCCTTGGCCTTTGGGAACTTTaGTCCAACTGGTGTGTCTCACACAATGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: VTVIGPLGLWEL*SNWCVSHNASQ
Trigger: TTGGGAGGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GTGCTGGGAGAGGAAACAAACCTTTACATTCACCTGTaGTTCCGAACACACGCACGCGCCTCTCTCTGTACC +
Preference number: 3 (lower is better)
Translates to: VLGEETNLYIHL*FRTHARASLCT
Trigger: GGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACAGGTGAATGTAAAGGTTTGTTTCCTCTCCCAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp CTGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTaGTGCACAGTGTGCCTTCTTCAATTGCTTGTATCA +
Preference number: 3 (lower is better)
Translates to: LDHRCRLPESSP*CTVCLLQLLVS
Trigger: TGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp GCTTTGGTAGCACAAGGTGACTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTCCAACTGGTGTGTCTC +
Preference number: 3 (lower is better)
Translates to: ALVAQGDCDRPP*PLGTLLQLVCL
Trigger: GAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACAGTCACCTTGTGCTACCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp TATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTaGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTTC +
Preference number: 3 (lower is better)
Translates to: YQAAILVCLTHA*LQGSCHPWASF
Trigger: GAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGCCTTCTTCAATTGCTaGTATCATTTATTCCACAAG +
Preference number: 3 (lower is better)
Translates to: VSVAGAPESLPFGFRASGAFFNC*YHLFHK
Trigger: CTTGTGGAATAAATGATACAAGCAATTGAAGAAGGC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGTATGTCCCTTGTGCTaGTGTGGCAGGTTTGGTTTC +
Preference number: 3 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAVCPLC*CGRFGF
Trigger: GAAACCAAACCTGCCACACAAGCACAAGGGACATAC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp TTCAATGGAAGTCCTCCGCTGATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTGTTTCCCTGGGGAAGC +
Preference number: 3 (lower is better)
Translates to: FNGSPPLIPRRL*DHTRALFPWGS
Trigger: GCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCATTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GCCCACGAGTGGGTTCTGACCTATAGTTTAGAAACCTaGTTAGACACTGTTGGGTGTGCAAGCTCACCCCTG +
Preference number: 3 (lower is better)
Translates to: AHEWVLTYSLET*LDTVGCASSPL
Trigger: CAGGGGTGAGCTTGCACACCCAACAGTGTCTAAGCAGGTTTCTAAACTATAGGTCAGAACCCACTCGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGTCAACACCAAACATTaGTCCATCCTTCTGGGACCT +
Preference number: 3 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAVNTKH*SILLGP
Trigger: AGGTCCCAGAAGGATGGACAAATGTTTGGTGTTGAC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTATCAGCTCACGGGTGGTaGGGCTCAGGGCTTGACCCC +
Preference number: 3 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLSAHGW*GSGLDP
Trigger: GGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTGA...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp CTGGCTGTTCACCTTCACAGCTCTGGCAAGAACTCATaGGGATGTGTGAGCAGAGTGTTTGTCATGACAGGG +
Preference number: 3 (lower is better)
Translates to: LAVHLHSSGKNS*GCVSRVFVMTG
Trigger: CCCTGTCATGACAAACACTCTGCTCACACATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGAACAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR GCA 72 bp GACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTaGACAGTGTGCCTTCTTCAATTGCTTGTATCATTT +
Preference number: 3 (lower is better)
Translates to: DHRCRLPESSPW*TVCLLQLLVSF
Trigger: AAATGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp GGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTTCCTaGTCATGTGTGTTCCTTTTAAGGATCGAAAGTACG +
Preference number: 3 (lower is better)
Translates to: GCKAAAILGHLS*SCVFLLRIEST
Trigger: CGTACTTTCGATCCTTAAAAGGAACACACATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp AGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTaGCTGTTCACCTTCACAGCTCTGGCAAGAACTCAT +
Preference number: 3 (lower is better)
Translates to: RASGATLNMTST*LFTFTALARTH
Trigger: ATGAGTTCTTGCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATT +
Preference number: 3 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDEASQP*SKIKVI
Trigger: AATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACGCTTGTGTGGCAGGTTaGGTTTCAGAACAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNACVAG*VSEQKG
Trigger: GCCCTTCTGTTCTGAAACCAAACCTGCCACACAAGC...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGGAATATGAACCTGTTTaGGTTTTTAAGTGTCCCATC +
Preference number: 3 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQEYEPV*VFKCPI
Trigger: GATGGGACACTTAAAAACCAAAACAGGTTCATATTC...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCATCCTGTCCTTTCCCCTaGGGCCCAGGATTCTACTCA +
Preference number: 3 (lower is better)
Translates to: RALQRMHVMNPQVVCKESSCPFP*GPGFYS
Trigger: TGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGA...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGTGTGCCTTCTTCAATaGCTTGTATCATTTATTCCA +
Preference number: 3 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDVCLLQ*LVSFIP
Trigger: TGGAATAAATGATACAAGCAATTGAAGAAGGCACAC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTCTAGGGACACTGGCTaGTTGGGTCTCTCCCCTGCT +
Preference number: 3 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSSRDTG*LGLSPA
Trigger: AGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGA...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGAATATGAACCTGTTTaGGTTTTTAAGTGTCCCATC +
Preference number: 3 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGEYEPV*VFKCPI
Trigger: GATGGGACACTTAAAAACCAAAACAGGTTCATATTC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCTGGCCTTTGGGAACTTaGCTCCAACTGGTGTGTCTC +
Preference number: 3 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSWPLGT*LQLVCL
Trigger: GAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCA...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTAGCATCTGGGGCGACTTaGAACATGACTTCAACCTGG +
Preference number: 3 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLASGAT*NMTSTW
Trigger: CCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGC...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp CCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTaGTTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: PYAITDCSFPVF*LSLASCVPLQH
Trigger: GTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR GCA 72 bp TACAGACTGCAGTTTTCCAGTCTTTTGATTAAGCCTTaGCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTG +
Preference number: 3 (lower is better)
Translates to: YRLQFSSLLIKP*QLCAAAAPKKL
Trigger: CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACTGCAGTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR-3UTR CAA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCAAGAGGTGGTTTTCATaGCAGGTGACTGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSKRWFS*QVTEAE
Trigger: CTCAGCCTCAGTCACCTGCAATGAAAACCACCTCTT...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGGTCCCATCTATATCATaGACTCTGATGGCAAGAGGT +
Preference number: 3 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWVPSIS*TLMARG
Trigger: ACCTCTTGCCATCAGAGTCAATGATATAGATGGGAC...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGCTTGTGTGGCAGGTTaGGTTTCAGAACAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGACVAG*VSEQKG
Trigger: GCCCTTCTGTTCTGAAACCAAACCTGCCACACAAGC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACAGGTCAGTGAACACTTaGATGGCCAGTTTGATATTA +
Preference number: 3 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNRSVNT*MASLIL
Trigger: TAATATCAAACTGGCCATCAAAGTGTTCACTGACCT...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGCATCTGGGGCGACTTaGAACATGACTTCAACCTGG +
Preference number: 3 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTASGAT*NMTSTW
Trigger: CCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGTCCCATCTATATCATaGACTCTGATGGCAAGAGGT +
Preference number: 3 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGVPSIS*TLMARG
Trigger: ACCTCTTGCCATCAGAGTCAATGATATAGATGGGAC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGACTTCTTTTAGGCTTCTaGGCAGGATTGGGAAAGTCA +
Preference number: 3 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGLLLGF*AGLGKS
Trigger: TGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAG...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTAGCAGTGGTTTTTCCTaGCAGATGACTCAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTSSGFS*QMTQRL
Trigger: CAGCCTCTGAGTCATCTGCAAGGAAAAACCACTGCT...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR TCA 72 bp AGCTTGTTCACTCAAAATCTGTCTAGGACTTTGTGTTaGTCAGTCAGTGTGTTGCCCAGAACATTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: SLFTQNLSRTLC*SVSVLPRTFLR
Trigger: TCTAAGGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTTGAGTGAACAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CCA 72 bp AGTCAACACCAGCACATGGTAGGTGCTAACACATGTTaGCTACTATTGTTTCTAAGAGAGGGTTTTCTTGAA +
Preference number: 3 (lower is better)
Translates to: SQHQHMVGANTC*LLLFLREGFLE
Trigger: TTCAAGAAAACCCTCTCTTAGAAACAATAGTAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCACTTTGATGGCCAGTTaGATATTAAAAACATGCCCC +
Preference number: 3 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSTLMAS*ILKTCP
Trigger: GGGGCATGTTTTTAATATCAAACTGGCCATCAAAGT...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR-3UTR CAA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATT +
Preference number: 3 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTEASQP*SKIKVI
Trigger: AATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCCCTGGGGAGAGGGGGTaGGGCGCATCGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFPGERG*GASHSQ
Trigger: CTGGGAGTGCGATGCGCCCCACCCCCTCTCCCCAGG...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGGAGTCGAGGGGCAGTaGGGCCGGGATGCGTGCGAG +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGGVEGQ*GRDACE
Trigger: CTCGCACGCATCCCGGCCTCACTGCCCCTCGACTCC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCGGAGTCGAGGGGCAGTaGGGCCGGGATGCGTGCGAG +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVGVEGQ*GRDACE
Trigger: CTCGCACGCATCCCGGCCTCACTGCCCCTCGACTCC...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTGACCCTCTGCCGCTCTaGCCAGTCGACCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LHSDVPCASRCPAYSRQADPLPL*PVDPVS
Trigger: GGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTC...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGGCTCCTCGACCCTCTaGCGCTCTGCCCAGTCGACC +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGGSSTL*RSAQST
Trigger: GGTCGACTGGGCAGAGCGGCAGAGGGTCGAGGAGCC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCGCCCTGGACCACCGCTaGAGATTGCCTGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSALDHR*RLPESS
Trigger: GGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGC...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCAGGAGTCAGTGCCATaGGAGTGGGGACCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSQESVP*EWGPLH
Trigger: GTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCACGGCGTGCGATTCTGTaGGGCCTGCTCTGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPRRAIL*GLLCAG
Trigger: GCCGGCGCAGAGCAGGCCTCACAGAATCGCACGCCG...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCTCTACTCCCTGGGCGTaGAGAGCAGGCTCCTCGACC +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVSTPWA*RAGSST
Trigger: GGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTAGA...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCCTGGTCTCGGAGAGTaGGGTCAGCACCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSPGLGE*GQHQTG
Trigger: TCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCCAGCTCACGGGTGGTTaGGCTCAGGGCTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVQLTGG*AQGLTP
Trigger: TGGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTG...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCGTCCCTTCAGGGCAGTaGGCTCCCCTCTGGCCCACG +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCVPSGQ*APLWPT
Trigger: CGTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGAC...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR TCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACCACCGCTGTCGCCGGTaGTGGCCCCCGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNHRCRR*WPPRAG
Trigger: TCCTGCCCGCGGGGGCCATCACCGGCGACAGCGGTG...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCCGATCACAGGCCCAGTaGAGTAGAGCCCTACCCTCT +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFRSQAQ*SRALPS
Trigger: AGAGGGTAGGGCTCTACTTCACTGGGCCTGTGATCG...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCCAAAGAGAAACGCCTaGAGAAGGATGCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSPKRNA*RRMQGG
Trigger: GCCGCCCTGCATCCTTCTTCAGGCGTTTCTCTTTGG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGCTCACCCCTGGCTGTaGGCCCAGCGACGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGAHPWL*AQRRQG
Trigger: GCCCTGGCGTCGCTGGGCTCACAGCCAGGGGTGAGC...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCACGCCTGAAGAAGGATaGAGGGCGGCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCTPEEG*RAAPLG
Trigger: CCCCAGCGGTGCCGCCCTGCATCCTTCTTCAGGCGT...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGTCGTACAGGTGAGATaGCAGCACTCCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFVVQVR*QHSCAL
Trigger: GAGGGCACAGGAGTGCTGGCATCTCACCTGTACGAC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGAACTCCCCCAAGCCTaGCCGGCACGTGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPELPQA*PAREGA
Trigger: TGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCTGGTGCAGGAGTCAGTaGCATGAGAGTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFWCRSQ*HESGDL
Trigger: GAGGTCCCCACTCTCATGGCACTGACTCCTGCACCA...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCTCTCCCCTGCTGTTCTaGTTAGGGGCTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFSPLLF*LGAWLL
Trigger: GAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGA...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGCGGGGCGGCGTGCGTaGCAGCGGCGTGCGATTCTG +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAAGRRA*QRRAIL
Trigger: CAGAATCGCACGCCGCTGGCACGCACGCCGCCCCGC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCCCCGGAGTCGTCCCCTaGGCTCAGCTCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: EGRASGATLNMTSTWLFTPGVVP*AQLSTA
Trigger: AGCGGTGGAGAGCTGAGCTCAGGGGACGACTCCGGG...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTCCCTGCTGGCCACCTaGATCAGGCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFSLLAT*IRPCRC
Trigger: GCACCTGCAAGGCCTGATTCAGGTGGCCAGCAGGGA...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGGGACCTCTCCACTCTaGTGTCCCCTGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRGTSPL*CPLCLA
Trigger: CGCGAGGCACAGGGGACATCAGAGTGGAGAGGTCCC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGGCTCACCCCTGGCTGTaGGCCCAGCGACGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLAHPWL*AQRRQG
Trigger: GCCCTGGCGTCGCTGGGCTCACAGCCAGGGGTGAGC...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCGACCCTCTGCCGCTCTaGCCAGTCGACCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGDPLPL*PVDPVS
Trigger: GGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTC...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCCAGGGCAGGCCGTGTTaGCCTCTGGACTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFQGRPC*PLDFQG
Trigger: CCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTG...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGCCCACTTCTACTCCCTaGGCGTGCAGAGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPPTSTP*ACRAGS
Trigger: GGAGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGG...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGCCTGGCCCACCAGTCTaGGTCGCGAGCCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQPGPPV*VASLSS
Trigger: GGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGG...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGCCGGCTTGGAGGCCTaGCCCACCAGTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLAGLEA*PTSLGR
Trigger: GCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGC...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCAGGTGTAAGGCCGGCTTaGAGGCCTGGCCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPGVRPA*RPGPPV
Trigger: GACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACC...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGCAGGGCGGCACCGCTaGGGGCAGTTCTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPAGRHR*GQFYKS
Trigger: GCTCTTATAGAACTGCCCCCAGCGGTGCCGCCCTGC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGCTTTGGGTTTGTGGTaGACGCCCCCTGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFALGLW*TPPEYV
Trigger: GACATACTCAGGGGGCGTCCACCACAAACCCAAAGC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTACCTGGGGAGAGGGGGTaGGGCGCATCGCACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLPGERG*GASHSQ
Trigger: CTGGGAGTGCGATGCGCCCCACCCCCTCTCCCCAGG...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCCACTTTTCAGTGGCTTaGGAAGGCCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVHFSVA*EGPWCR
Trigger: CCTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTG...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCCTCCAGGGGCACTGTaGAGAAAAGGGCAGTATGCC +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGPPGAL*RKGQYA
Trigger: GGCATACTGCCCTTTTCTCCACAGTGCCCCTGGAGG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCACAGAGACACCTTCTaGGGCACACAGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSHRDTF*GTQVSK
Trigger: CTTGCTCACCTGTGTGCCCCAGAAGGTGTCTCTGTG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCTTCAGGGAGGGAGTTaGGCCACAGTAGTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGLQGGS*ATVVPG
Trigger: TCCCGGAACTACTGTGGCCCAACTCCCTCCCTGAAG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp TCCCTACCCTTCGGGTTCAGGGCTTCAGGGAGGGAGTaGGGCCACAGTAGTTCCGGGATGACAGTGGCCACG +
Preference number: 4 (lower is better)
Translates to: SLPFGFRASGRE*GHSSSGMTVAT
Trigger: CGTGGCCACTGTCATCCCGGAACTACTGTGGCCCAACTCCCTCCCTGAAGCCCTGAACCCGAAGGGTAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTCCCGGAGTCGTCCCCTaGGCTCAGCTCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTPGVVP*AQLSTA
Trigger: AGCGGTGGAGAGCTGAGCTCAGGGGACGACTCCGGG...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTGGAAGGTATCCTGAGTaGCATCAGCTCACGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LHSDVPCASRCPAYSRQAGRYPE*HQLTGG
Trigger: ACCACCCGTGAGCTGATGTCACTCAGGATACCTTCC...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCATGACAGTGGCCACGTaGGAGAAGAAAACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSMTVAT*EKKTAR
Trigger: TCGGGCTGTTTTCTTCTCTCACGTGGCCACTGTCAT...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGATGCCAGCACTCCTGTaGCCTCCGGGGATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQMPALL*PPGIPG
Trigger: GCCTGGGATCCCCGGAGGGCACAGGAGTGCTGGCAT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCGAACTCCCCCAAGCCTaGCCGGCACGTGAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGELPQA*PAREGA
Trigger: TGCTCCCTCACGTGCCGGGCAGGCTTGGGGGAGTTC...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCGATTCTGTGAGGCCTaGTCTGCGCCGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGRFCEA*SAPAGK
Trigger: CTTCCCCGCCGGCGCAGAGCAGGCCTCACAGAATCG...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGCAGCTCACGGGTGGTTaGGCTCAGGGCTTGACCCCA +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRQLTGG*AQGLTP
Trigger: TGGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTG...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGCTTGGGAAGGCCCGTaGTGCAGGAGTCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPAWEGP*CRSQCH
Trigger: ATGGCACTGACTCCTGCACCACGGGCCTTCCCAAGC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGAGACTTCTGTGCAGCTaGGCTGGCAGGGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPRLLCS*AGRGGL
Trigger: CAACCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCT...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCACTGAAGACAGAGTTCTaGGGCCCACCTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPLKTEF*GPPGER
Trigger: CCTCTCCCCAGGTGGGCCTCAGAACTCTGTCTTCAG...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCGGCTTTTGCCAGAACTaGAGACAGAGTTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVGFCQN*RQSSEA
Trigger: GGCCTCAGAACTCTGTCTTCAGTTCTGGCAAAAGCC...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCGGGTGGAAGGTATCCTaGGTGACATCAGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCGWKVS*VTSAHG
Trigger: CCCGTGAGCTGATGTCACTCAGGATACCTTCCACCC...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGGGACCTCTCCACTCTaGTGTCCCCTGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGGTSPL*CPLCLA
Trigger: CGCGAGGCACAGGGGACATCAGAGTGGAGAGGTCCC...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCATGACAGTGGCCACGTaGGAGAAGAAAACAGCCCGA +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVMTVAT*EKKTAR
Trigger: TCGGGCTGTTTTCTTCTCTCACGTGGCCACTGTCAT...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGACAAGAGCTGCTCCCTaGTGGCCACCTGAATCAGGC +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPTRAAP*WPPESG
Trigger: GCCTGATTCAGGTGGCCAGCAGGGAGCAGCTCTTGT...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCGGTGTGTCTGACCCATaGTTGGCTGCAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCGVSDP*LAARQL
Trigger: CAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACC...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTATGCCAGCACTCCTGTaGCCTCCGGGGATCCCAGGC +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTMPALL*PPGIPG
Trigger: GCCTGGGATCCCCGGAGGGCACAGGAGTGCTGGCAT...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCCTTTACATTCACCTGTaGTTCCGAACACACGCACGC +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSLYIHL*FRTHAR
Trigger: GCGTGCGTGTGTTCGGAAGCACAGGTGAATGTAAAG...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTGGTGTAAGGCCGGCTTaGAGGCCTGGCCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTGVRPA*RPGPPV
Trigger: GACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACC...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCCCTGCATTGCTTGGCTaGGGCTTGAATCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVPALLG*GLNHQV
Trigger: CACTTGGTGATTCAAGCCCCAGCCAAGCAATGCAGG...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGGGTCAGCACCAGACTaGAGCAGCAGCTCTACAATA +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGGSAPD*SSSSTI
Trigger: TATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGACATCAGCTCACGGGTaGTTGGGCTCAGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPTSAHG*LGSGLD
Trigger: GTCAAGCCCTGAGCCCAACCACCCGTGAGCTGATGT...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCTTCTGCTTAGGGGCTTaGCTGCTCAGTGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFFCLGA*LLSALV
Trigger: TACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAA...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTCCCTGCTGGCCACCTaGATCAGGCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDSLLAT*IRPCRC
Trigger: GCACCTGCAAGGCCTGATTCAGGTGGCCAGCAGGGA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGTTGCAGCAACACTGTaGCTAGTTCCTTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFVAATL*LVPYVL
Trigger: GAGGACATAAGGAACTAGTCACAGTGTTGCTGCAAC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCGTGGTGGACGCCCCCTaGGTATGTCCCTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGVVDAP*VCPLCL
Trigger: CAAGCACAAGGGACATACTCAGGGGGCGTCCACCAC...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTGCAGAGTGTTTGTCATaGCAGGGACGTGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: LHSDVPCASRCPAYSRQAAECLS*QGRVEL
Trigger: CAATTCCACACGTCCCTGTCATGACAAACACTCTGC...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGIPRRL*DHTRAL
Trigger: CAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAAT...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGCCCTGGACCACCGCTaGAGATTGCCTGAGTCGTCC +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLALDHR*RLPESS
Trigger: GGACGACTCAGGCAATCTGCAGCGGTGGTCCAGGGC...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGCCTGCCCCAGATTGTaGGCCCCAAGCGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLACPRL*APSASK
Trigger: TTTGGAGGCGCTTGGGGCGCACAATCTGGGGCAGGC...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTGCGTGCCAGCGGCGTaGGATTCTGTGAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDCVPAA*DSVRPA
Trigger: AGCAGGCCTCACAGAATCGCACGCCGCTGGCACGCA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGCAGGCAGCCATCCTaGTCTCGGAGAGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLGRQPS*SRRVGS
Trigger: TGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCC...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTACCGCCTAGGGGGTCCTaGGGGCTTTGGGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLPPRGS*GLWVCG
Trigger: ACCACAAACCCAAAGCCCCCAGGACCCCCTAGGCGG...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTCACCTTCACAGCTCTaGCAAGAACTCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSSPSQL*QELMRM
Trigger: CATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCAGAGGGGAGGGCATCTaGGGCGACTTTGAACATGAC +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCRGEGI*GDFEHD
Trigger: GTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTCT...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTGTACACACATGTCCTaGCTGCACAGCTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSCTHMS*LHSCFI
Trigger: AATGAAGCAGCTGTGCAGCCAGGACATGTGTGTACA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGGGACACTGGCTTGTTaGGTCTCTCCCCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRGTLAC*VSPLLF
Trigger: GAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTACTGCGATATATTCCTaGATTGCTTGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LHSDVPCASRCPAYSRQATAIYS*IAWLGL
Trigger: AAGCCCCAGCCAAGCAATGCAGGAATATATCGCAGT...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCCTTTTGATTAAGCCTTaGCAGTTGTGTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVLLIKP*QLCAAA
Trigger: TGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAG...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACTGGACGTCCTTCCCTaGCGGAGGAGAGAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRALDVLP*RRRESA
Trigger: GGCACTTTCTCTCCTCCGGCAGGGAAGGACGTCCAG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGATCGATCTCAGGGCTATaGGGGAACTCCACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGSISGL*GNSTSP
Trigger: CGGGGAGGTGGAGTTCCCCCATAGCCCTGAGATCGA...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTCGATCTCAGGGCTATaGGGGAACTCCACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDSISGL*GNSTSP
Trigger: CGGGGAGGTGGAGTTCCCCCATAGCCCTGAGATCGA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGCTCGGCCAGGCAACTaGTCTCCTCGATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGARPGN*SPRSQG
Trigger: GCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGTATTCCTGCATTGCTTaGCTGGGGCTTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGYSCIA*LGLESP
Trigger: TGGTGATTCAAGCCCCAGCCAAGCAATGCAGGAATA...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGGCAGGCAGCCATCCTaGTCTCGGAGAGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNGRQPS*SRRVGS
Trigger: TGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTTCCCTTGTGCTTGTGTaGCAGGTTTGGTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LHSDVPCASRCPAYSRQASLVLV*QVWFQN
Trigger: GTTCTGAAACCAAACCTGCCACACAAGCACAAGGGA...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCACATCAGCTCACGGGTaGTTGGGCTCAGGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: EGRASGATLNMTSTWLFTTSAHG*LGSGLD
Trigger: GTCAAGCCCTGAGCCCAACCACCCGTGAGCTGATGT...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTGTTGCCCTCTaGACTTCCAAGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAGRVAL*TSKGEV
Trigger: CACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGACAGTGGGCTCCCCTCTaGCCCACGACAAGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGQWAPL*PTTSPE
Trigger: TTCTGGACTTGTCGTGGGCCAGAGGGGAGCCCACTG...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR CAA 72 bp TGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATaGGTGTGTCTGACCCATGCTTGGCTGCAAGGCAGC +
Preference number: 4 (lower is better)
Translates to: WPGLASGYQAAI*VCLTHAWLQGS
Trigger: GCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCAAAGAGAAACGCCTaGAGAAGGATGCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDPKRNA*RRMQGG
Trigger: GCCGCCCTGCATCCTTCTTCAGGCGTTTCTCTTTGG...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGAGCCTGCCCGGCACGTaGGGGAGCAGCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLSLPGT*GSSCPQ
Trigger: CTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCT...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR TCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGCCCAGGCCAGCTGCTaGCTTTATTCCGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGAQASC*LYSVCP
Trigger: AGGACACACGGAATAAAGTCAGCAGCTGGCCTGGGC...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGCCCAGGCCAGCTGCTaGCTTTATTCCGTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLAQASC*LYSVCP
Trigger: AGGACACACGGAATAAAGTCAGCAGCTGGCCTGGGC...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGACAGTAGTTCCGGGATaGCAGTGGCCACGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQTVVPG*QWPRER
Trigger: TCTCTCACGTGGCCACTGTCATCCCGGAACTACTGT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGAAGCCATGTCTCCTTaGTCGCTCCGTCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGEAMSP*SLRPSV
Trigger: CACAGAGGGACGGAGCGAGCAAGGAGACATGGCTTC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTATCAGGCCTTGCAGGTaGGCGGCAGCCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTIRPCR*AAAFSN
Trigger: GTTTGAGAAGGCTGCCGCGCACCTGCAAGGCCTGAT...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGTCGTACAGGTGAGATaGCAGCACTCCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGVVQVR*QHSCAL
Trigger: GAGGGCACAGGAGTGCTGGCATCTCACCTGTACGAC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCTGCCTCGCGCTGTCCTaGCTACAGCAGGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGCLALS*LQQAGL
Trigger: TAAGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCA...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTACTGATGAGACTTCTGTaGAGCTGGGCTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLLMRLL*SWAGRG
Trigger: TCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAG...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTCTGATGAGACTTCTGTaGAGCTGGGCTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTLMRLL*SWAGRG
Trigger: TCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAG...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAACCACCGCTGCAGATTaGCTGAGTCGTCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGTTAAD*LSRPLG
Trigger: ACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGT...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCGCGGGGCGGCGTGCGTaGCAGCGGCGTGCGATTCTG +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSAGRRA*QRRAIL
Trigger: CAGAATCGCACGCCGCTGGCACGCACGCCGCCCCGC...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTGGGGCTTTGGGTTTGTaGTGGACGCCCCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTGALGL*WTPPEY
Trigger: ATACTCAGGGGGCGTCCACCACAAACCCAAAGCCCC...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCGTCCTCACTTTTCAGTaGCTTGGGAAGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: EGRASGATLNMTSTWLFTVLTFQ*LGKARG
Trigger: ACCACGGGCCTTCCCAAGCCACTGAAAAGTGAGGAC...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGAGACTTCTGTGCAGCTaGGCTGGCAGGGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLRLLCS*AGRGGL
Trigger: CAACCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGAGAGGGGAGGGCATCTaGGGCGACTTTGAACATGAC +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQRGEGI*GDFEHD
Trigger: GTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTCT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCAAAGGTGACATGGCTGTaGGGAAATGGGAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPKVTWL*GNGRLL
Trigger: CAGGAGTCTCCCATTTCCCCACAGCCATGTCACCTT...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCCTGTCCTTTCCCCTTaGGCCCAGGATTCTACTCAG +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGPVLSP*AQDSTQ
Trigger: CTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGG...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGTTGAGGCAGGGAGCTaGGCAGAGAAAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNVEAGS*AEKGLL
Trigger: CAGCAGTCCTTTCTCTGCTCAGCTCCCTGCCTCAAC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGATCAGGCCTTGCAGGTaGGCGGCAGCCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLIRPCR*AAAFSN
Trigger: GTTTGAGAAGGCTGCCGCGCACCTGCAAGGCCTGAT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTATGGCTGCAAGGCAGCTaGCATCCTTGGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLWLQGS*HPWASF
Trigger: GAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCA...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGGTGTGTCTGACCCATaGTTGGCTGCAAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGGVSDP*LAARQL
Trigger: CAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCCTCTGGATATCAGGCTaGCATATTGGTGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCLWISG*HIGVSD
Trigger: GTCAGACACACCAATATGGCAGCCTGATATCCAGAG...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAGCACTCCCAGACCTGTaGTCCATTCAGGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGALPDL*SIQASV
Trigger: GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGC...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGCACTCCCAGACCTGTaGTCCATTCAGGCTTCAGTC +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDALPDL*SIQASV
Trigger: GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACAGACACTGTTGGGTGTaGAAGCTCACCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDRHCWV*KLTPGC
Trigger: ACAGCCAGGGGTGAGCTTGCACACCCAACAGTGTCT...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTAGACACTGTTGGGTGTaGAAGCTCACCCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTRHCWV*KLTPGC
Trigger: ACAGCCAGGGGTGAGCTTGCACACCCAACAGTGTCT...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGTCCTGGCTGCACAGCTaGTTCATTCCTCTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQSWLHS*FIPLVP
Trigger: AGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGA...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGACCACCGCTGCAGATTaGCTGAGTCGTCCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLTTAAD*LSRPLG
Trigger: ACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGGCCTTTGGGAACTTTaGTCCAACTGGTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRGLWEL*SNWCVS
Trigger: TGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGCGATTCTGTGAGGCCTaGTCTGCGCCGGCGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLRFCEA*SAPAGK
Trigger: CTTCCCCGCCGGCGCAGAGCAGGCCTCACAGAATCG...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGCCTGGTCTCGGAGAGTaGGGTCAGCACCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: SGATLNMTSTWLFTFTALPGLGE*GQHQTG
Trigger: TCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGG...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGCTTGGGCATCTTTCCTaGTCATGTGTGTTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGLGHLS*SCVFLL
Trigger: TAAAAGGAACACACATGACCAGGAAAGATGCCCAAG...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCTCCCTTGTGCTTGTGTaGCAGGTTTGGTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCSLVLV*QVWFQN
Trigger: GTTCTGAAACCAAACCTGCCACACAAGCACAAGGGA...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCACTTTTCAGTGGCTTaGGAAGGCCCGTGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGHFSVA*EGPWCR
Trigger: CCTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCCTCCAGGGGCACTGTaGAGAAAAGGGCAGTATGCC +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGPPGAL*RKGQYA
Trigger: GGCATACTGCCCTTTTCTCCACAGTGCCCCTGGAGG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCGAACTTTGCTCCAACTaGTGTGTCTCACACAATGCC +
Preference number: 4 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFELCSN*CVSHNA
Trigger: GGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTC...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGAAGGGCATTGTTTCCCTaGGGAAGCAGTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGRALFP*GSSGRA
Trigger: TGCTCTCCCACTGCTTCCCCAGGGAAACAATGCCCT...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp GGTGACTGTGATAGGCCCCCTTGGCCTTTGGGAACTTaGCTCCAACTGGTGTGTCTCACACAATGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: GDCDRPPWPLGT*LQLVCLTQCLP
Trigger: TGGGAGGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACAGTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACCATATTGGTGTGTCTaGCCCATGCTTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAPYWCV*PMLGCK
Trigger: CTTGCAGCCAAGCATGGGTCAGACACACCAATATGG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGTTGAGGCAGGGAGCTaGGCAGAGAAAGGACTGCTG +
Preference number: 4 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWVEAGS*AEKGLL
Trigger: CAGCAGTCCTTTCTCTGCTCAGCTCCCTGCCTCAAC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTCTGGCAAGAACTCATaGGGATGTGTGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: EGRASGATLNMTSTWLFTSGKNS*GCVSRV
Trigger: CACTCTGCTCACACATCCTCATGAGTTCTTGCCAGA...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGTCTAGGACTTTGTGTTaGTCAGTCAGTGTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRSRTLC*SVSVLP
Trigger: GGGCAACACACTGACTGATCAACACAAAGTCCTAGA...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCTTCCAAGGGGGAAGTaGGTTACTGGCCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGLPRGK*VTGPSH
Trigger: GTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACACAGTAGTTCCGGGATaGCAGTGGCCACGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNTVVPG*QWPRER
Trigger: TCTCTCACGTGGCCACTGTCATCCCGGAACTACTGT...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAATGGAAGTCCTCCGCTaGTTCCTAGAAGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLMEVLR*FLEGCE
Trigger: CTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCAT...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACATGGAAGTCCTCCGCTaGTTCCTAGAAGGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDMEVLR*FLEGCE
Trigger: CTCACAGCCTTCTAGGAATCAGCGGAGGACTTCCAT...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCCGGCGTGCGATTCTGTaGGGCCTGCTCTGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSRRAIL*GLLCAG
Trigger: GCCGGCGCAGAGCAGGCCTCACAGAATCGCACGCCG...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGCGTGACCCTGCTCCCTaGCCACTTCTACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLRDPAP*PLLLPG
Trigger: CCCAGGGAGTAGAAGTGGGCAGGGAGCAGGGTCACG...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR GCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGAAGCCATGTCTCCTTaGTCGCTCCGTCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWEAMSP*SLRPSV
Trigger: CACAGAGGGACGGAGCGAGCAAGGAGACATGGCTTC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCCAGTTGTGTGCCGCTaGAGCACCAAAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGPVVCR*STKETV
Trigger: AACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGG...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCCCAGTTGTGTGCCGCTaGAGCACCAAAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: EGRASGATLNMTSTWLFTPVVCR*STKETV
Trigger: AACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGG...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTACGCCTGAAGAAGGATaGAGGGCGGCACCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLTPEEG*RAAPLG
Trigger: CCCCAGCGGTGCCGCCCTGCATCCTTCTTCAGGCGT...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCTTTACATTCACCTGTaGTTCCGAACACACGCACGC +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGLYIHL*FRTHAR
Trigger: GCGTGCGTGTGTTCGGAAGCACAGGTGAATGTAAAG...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGCAGGGCAGGCCGTGTTaGCCTCTGGACTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLQGRPC*PLDFQG
Trigger: CCCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTG...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR GCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTCACACATGTCCTGGCTaGACAGCTGCTTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTHTCPG*TAASFL
Trigger: GAGGAATGAAGCAGCTGTGCAGCCAGGACATGTGTG...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCACACACATGTCCTGGCTaGACAGCTGCTTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAHTCPG*TAASFL
Trigger: GAGGAATGAAGCAGCTGTGCAGCCAGGACATGTGTG...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGAGTCGTCCCCTTGGTaGACAGTGTGCCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGESSPW*TVCLLQ
Trigger: TTGAAGAAGGCACACTGTGCACCAAGGGGACGACTC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCATATTCCTGCATTGCTTaGCTGGGGCTTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPYSCIA*LGLESP
Trigger: TGGTGATTCAAGCCCCAGCCAAGCAATGCAGGAATA...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGGCAGCTGCCATCCTTaGGCATCTTTCCTGGTCATG +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGGSCHP*ASFLVM
Trigger: CATGACCAGGAAAGATGCCCAAGGATGGCAGCTGCC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGCCTGGGTTGGCCTCTaGATATCAGGCTGCCATATT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDAWVGL*ISGCHI
Trigger: AATATGGCAGCCTGATATCCAGAGGCCAACCCAGGC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGCACAGAGACACCTTCTaGGGCACACAGGTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LASGYQAAILVCLTHAWLHRDTF*GTQVSK
Trigger: CTTGCTCACCTGTGTGCCCCAGAAGGTGTCTCTGTG...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTCDRPP*PLGTLL
Trigger: GAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACA...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACACCGCTGTCGCCGGTaGTGGCCCCCGCGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVHRCRR*WPPRAG
Trigger: TCCTGCCCGCGGGGGCCATCACCGGCGACAGCGGTG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR TCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGGTTGGGCTCAGGGCTTaGCCCCAGGGCTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWVGLRA*PQGFCQ
Trigger: CTGGCAAAAGCCCTGGGGTCAAGCCCTGAGCCCAAC...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTATCTGGCAAGAACTCATaGGGATGTGTGAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLSGKNS*GCVSRV
Trigger: CACTCTGCTCACACATCCTCATGAGTTCTTGCCAGA...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGCCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWPLQIA*VVPLVH
Trigger: GTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGG...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTCCGCTGCAGATTGCCTaGGTCGTCCCCTTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLPLQIA*VVPLVH
Trigger: GTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGG...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTCGTGACCCTGCTCCCTaGCCACTTCTACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLRDPAP*PLLLPG
Trigger: CCCAGGGAGTAGAAGTGGGCAGGGAGCAGGGTCACG...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGCAGGCAGGCTTAGGTaGAGAAAGGATGGAAGGGAG +
Preference number: 4 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWAGRLR*RKDGRE
Trigger: CTCCCTTCCATCCTTTCTGCACCTAAGCCTGCCTGC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCAGTCGGTGTTCCATTaGTTTCCTGTCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDQSVFH*FPVLSP
Trigger: AGGGGAAAGGACAGGAAAGCAATGGAACACCGACTG...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTGCCTGCCCCAGATTGTaGGCCCCAAGCGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLACPRL*APSASK
Trigger: TTTGGAGGCGCTTGGGGCGCACAATCTGGGGCAGGC...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGTCCTCACTTTTCAGTaGCTTGGGAAGGCCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWVLTFQ*LGKARG
Trigger: ACCACGGGCCTTCCCAAGCCACTGAAAAGTGAGGAC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCTGCTTAGACACTGTTaGGTGTGCAAGCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGLLRHC*VCKLTP
Trigger: AGGGGTGAGCTTGCACACCCAACAGTGTCTAAGCAG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACCTGCTTAGACACTGTTaGGTGTGCAAGCTCACCCCT +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNLLRHC*VCKLTP
Trigger: AGGGGTGAGCTTGCACACCCAACAGTGTCTAAGCAG...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGGGTGCTAACACATGTTaGCTACTATTGTTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: VSVAGAPESLPFGFRASGGANTC*LLLFLR
Trigger: TCTTAGAAACAATAGTAGCCAACATGTGTTAGCACC...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACGGGGAAGTGAGTTACTaGCCCAAGTCACTCACTCAT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDGEVSY*PKSLTH
Trigger: ATGAGTGAGTGACTTGGGCCAGTAACTCACTTCCCC...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACTGTGATAGGCCCCCTTaGCCTTTGGGAACTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNCDRPP*PLGTLL
Trigger: GAGCAAAGTTCCCAAAGGCCAAGGGGGCCTATCACA...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp ATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTaGGCTGCAAGGCAGCTGCCATCCTTGGGCATCTTT +
Preference number: 4 (lower is better)
Translates to: ISGCHIGVSDPC*AARQLPSLGIF
Trigger: AAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACCGATCACAGGCCCAGTaGAGTAGAGCCCTACCCTCT +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNRSQAQ*SRALPS
Trigger: AGAGGGTAGGGCTCTACTTCACTGGGCCTGTGATCG...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCAGCCTGCCCGGCACGTaGGGGAGCAGCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSSLPGT*GSSCPQ
Trigger: CTGAGGACAGCTGCTCCCTCACGTGCCGGGCAGGCT...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCATTCCTAGAAGGCTGTaGGACCACACTAGGGCATTG +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGIPRRL*DHTRAL
Trigger: CAATGCCCTAGTGTGGTCTCACAGCCTTCTAGGAAT...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCTCTACTCCCTGGGCGTaGAGAGCAGGCTCCTCGACC +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSSTPWA*RAGSST
Trigger: GGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTAGA...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCATAATGGAAGCCTTATaGTATTACAGACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: EGVGRIALPDLCSIQASVIMEAL*YYRLQF
Trigger: AAACTGCAGTCTGTAATAGCATAAGGCTTCCATTAT...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGGCCTTTGGGAACTTTaGTCCAACTGGTGTGTCTCA +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGGLWEL*SNWCVS
Trigger: TGAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACCAGTCGGTGTTCCATTaGTTTCCTGTCCTTTCCCCT +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNQSVFH*FPVLSP
Trigger: AGGGGAAAGGACAGGAAAGCAATGGAACACCGACTG...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCTGCGTGCCAGCGGCGTaGGATTCTGTGAGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSCVPAA*DSVRPA
Trigger: AGCAGGCCTCACAGAATCGCACGCCGCTGGCACGCA...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGGCCGGCTTGGAGGCCTaGCCCACCAGTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKAGLEA*PTSLGR
Trigger: GCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGC...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGATTTTTCTCCTTGGCCTaGGTTGGCCTCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGFFSLA*VGLWIS
Trigger: TGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAA...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGGGTCCTGGGGGCTTTaGGTTTGTGGTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: RALQRMHVMNPQVVCKESGSWGL*VCGGRP
Trigger: GGGGCGTCCACCACAAACCCAAAGCCCCCAGGACCC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCCCGCCTAGGGGGTCCTaGGGGCTTTGGGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSPPRGS*GLWVCG
Trigger: ACCACAAACCCAAAGCCCCCAGGACCCCCTAGGCGG...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTGCTTGGGAAGGCCCGTaGTGCAGGAGTCAGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLAWEGP*CRSQCH
Trigger: ATGGCACTGACTCCTGCACCACGGGCCTTCCCAAGC...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGGAAGCAGTGGGAGAGCAGACTCATCTCAGAACACAGCACAGGGGGTAATGGCCATGACAGGGACGTGTaGAATTGGGTACATTCAATC +
Preference number: 4 (lower is better)
Translates to: GKQWESRLISEHSTGGNGHDRDV*NWVHSI
Trigger: GATTGAATGTACCCAATTCCACACGTCCCTGTCATG...GCCATTACCCCCTGTGCTGTGTTCTGAGATGAGTCTGCTCTCCCACTGCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTCACCTTCACAGCTCTaGCAAGAACTCATGAGGATG +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDSPSQL*QELMRM
Trigger: CATCCTCATGAGTTCTTGCCAGAGCTGTGAAGGTGA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGAACATGACTTCAACCTaGCTGTTCACCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQNMTST*LFTFTA
Trigger: AGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTGTACACACATGTCCTaGCTGCACAGCTGCTTCATT +
Preference number: 4 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDCTHMS*LHSCFI
Trigger: AATGAAGCAGCTGTGCAGCCAGGACATGTGTGTACA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGAACTTTGCTCCAACTaGTGTGTCTCACACAATGCC +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAELCSN*CVSHNA
Trigger: GGCATTGTGTGAGACACACCAGTTGGAGCAAAGTTC...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACGGGACACTGGCTTGTTaGGTCTCTCCCCTGCTGTTC +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNGTLAC*VSPLLF
Trigger: GAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCC...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAAATCAGGAGAACAAATaGAAGCTCCGCAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRANQENK*KLRSRC
Trigger: ACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATT...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGTTGGGCTCAGGGCTTaGCCCCAGGGCTTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSVGLRA*PQGFCQ
Trigger: CTGGCAAAAGCCCTGGGGTCAAGCCCTGAGCCCAAC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTGGGTGGAAGGTATCCTaGGTGACATCAGCTCACGGG +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLGWKVS*VTSAHG
Trigger: CCCGTGAGCTGATGTCACTCAGGATACCTTCCACCC...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCAGAGTGTTTGTCATaGCAGGGACGTGTGGAATTG +
Preference number: 4 (lower is better)
Translates to: SGATLNMTSTWLFTFTALAECLS*QGRVEL
Trigger: CAATTCCACACGTCCCTGTCATGACAAACACTCTGC...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACGGGAAACGCGAGGCTaGGGACTAAGGTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLRETRG*GLRFRL
Trigger: CAGGCGGAACCTTAGTCCTCAGCCTCGCGTTTCCCG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCCCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGPKKLF*SLSPPL
Trigger: CAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGG...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGCCTTGGTGCACAGTGTaGCTTCTTCAATTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGPWCTV*LLQLLV
Trigger: TACAAGCAATTGAAGAAGGCACACTGTGCACCAAGG...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCACCCACTTCTACTCCCTaGGCGTGCAGAGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: RALQRMHVMNPQVVCKESPTSTP*ACRAGS
Trigger: GGAGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGG...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGCCTGGCCCACCAGTCTaGGTCGCGAGCCTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKPGPPV*VASLSS
Trigger: GGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGG...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGAGCCGGCTTGGAGGCCTaGCCCACCAGTCTGGGTCGC +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARAGLEA*PTSLGR
Trigger: GCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGC...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTAGCTCGGCCAGGCAACTaGTCTCCTCGATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLARPGN*SPRSQG
Trigger: GCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGC...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCATGGCTTTGGTTATATaGTCAATGTTGTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFMALVI*SMLFSL
Trigger: CAGGGAAAACAACATTGACCATATAACCAAAGCCAT...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCGGTGCTAACACATGTTaGCTACTATTGTTTCTAAGA +
Preference number: 4 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFGANTC*LLLFLR
Trigger: TCTTAGAAACAATAGTAGCCAACATGTGTTAGCACC...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGGGGAAGTGAGTTACTaGCCCAAGTCACTCACTCAT +
Preference number: 4 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWGEVSY*PKSLTH
Trigger: ATGAGTGAGTGACTTGGGCCAGTAACTCACTTCCCC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTCTTCAGGGAGGGAGTTaGGCCACAGTAGTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLLQGGS*ATVVPG
Trigger: TCCCGGAACTACTGTGGCCCAACTCCCTCCCTGAAG...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACCCTGAGTCGTCCCCTTaGTGCACAGTGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNPESSP*CTVCLL
Trigger: AAGAAGGCACACTGTGCACCAAGGGGACGACTCAGG...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGTTCCATTATTTTCAATaGAAGTCCTCCGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRFHYFQ*KSSADS
Trigger: GGAATCAGCGGAGGACTTCCATTGAAAATAATGGAA...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCCCGGAGTCGTCCCCTaGGCTCAGCTCTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLPGVVP*AQLSTA
Trigger: AGCGGTGGAGAGCTGAGCTCAGGGGACGACTCCGGG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGTGGTGGACGCCCCCTaGGTATGTCCCTTGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RALQRMHVMNPQVVCKESVVDAP*VCPLCL
Trigger: CAAGCACAAGGGACATACTCAGGGGGCGTCCACCAC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGCCCATTCTCTTCATCTaGTTTCCTGTTTTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRPILFI*FPVLVL
Trigger: CAAAACTAAAACAGGAAATCAGATGAAGAGAATGGG...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAGACCCTCTGCCGCTCTaGCCAGTCGACCCGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVDPLPL*PVDPVS
Trigger: GGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTC...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAGGCTCCTCGACCCTCTaGCGCTCTGCCCAGTCGACC +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVGSSTL*RSAQST
Trigger: GGTCGACTGGGCAGAGCGGCAGAGGGTCGAGGAGCC...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTGCCTTGCCAGTTGTGTaGCGCTGCAGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLALPVV*RCSTKE
Trigger: TTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGC...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCTGCCTCGCGCTGTCCTaGCTACAGCAGGCAGGCTTA +
Preference number: 4 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSCLALS*LQQAGL
Trigger: TAAGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCA...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTCTTGGGCATCTTTCCTaGTCATGTGTGTTCCTTTTA +
Preference number: 4 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTLGHLS*SCVFLL
Trigger: TAAAAGGAACACACATGACCAGGAAAGATGCCCAAG...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGCTTCTTGGCAGGATTaGGAAAGTCAATCTCATCTG +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNASWQD*ESQSHL
Trigger: CAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCGCAGGGCGGCACCGCTaGGGGCAGTTCTATAAGAGC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSAGRHR*GQFYKS
Trigger: GCTCTTATAGAACTGCCCCCAGCGGTGCCGCCCTGC...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGGGGTCCTGGGGGCTTTaGGTTTGTGGTGGACGCCCC +
Preference number: 4 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMGSWGL*VCGGRP
Trigger: GGGGCGTCCACCACAAACCCAAAGCCCCCAGGACCC...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAACATGACTTCAACCTaGCTGTTCACCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNNMTST*LFTFTA
Trigger: AGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTT...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTAGGGCATTGTTTCCCTaGGGAAGCAGTGGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLRALFP*GSSGRA
Trigger: TGCTCTCCCACTGCTTCCCCAGGGAAACAATGCCCT...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp CGTCCCCTTGGTGCACAGTGTGCCTTCTTCAATTGCTaGTATCATTTATTCCACAAGACAGGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPLGAQCAFFNC*YHLFHKTGCGL
Trigger: CAGCCCACAGCCTGTCTTGTGGAATAAATGATACAAGCAATTGAAGAAGGCACACTGTGCACCAAGGGGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTCTGGGTCGCGAGCCTaGGCTCCAGTCGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLSGSRA*APVGPK
Trigger: CTTGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATCTGGGTCGCGAGCCTaGGCTCCAGTCGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARSGSRA*APVGPK
Trigger: CTTGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTTCTGGGTCGCGAGCCTaGGCTCCAGTCGGACCCAAG +
Preference number: 4 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTSGSRA*APVGPK
Trigger: CTTGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGA...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTCCCTGCTGGCCACCTaGATCAGGCCTTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKSLLAT*IRPCRC
Trigger: GCACCTGCAAGGCCTGATTCAGGTGGCCAGCAGGGA...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR TCA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGTACAATTTCCAACTTTaGCCTGTTTGTACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGYNFQL*PVCTWH
Trigger: ATGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTA...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGCCACATTTTTCGATTTaGTGGCTTTGGTTATATGGT +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQPHFSI*WLWLYG
Trigger: ACCATATAACCAAAGCCATCAAATCGAAAAATGTGG...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGACTGAAGACAGAGTTCTaGGGCCCACCTGGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGLKTEF*GPPGER
Trigger: CCTCTCCCCAGGTGGGCCTCAGAACTCTGTCTTCAG...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCGGAAGGTATCCTGAGTaGCATCAGCTCACGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSGRYPE*HQLTGG
Trigger: ACCACCCGTGAGCTGATGTCACTCAGGATACCTTCC...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCCAGGAGTCAGTGCCATaGGAGTGGGGACCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSQESVP*EWGPLH
Trigger: GTGGAGAGGTCCCCACTCTCATGGCACTGACTCCTG...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGATGTCAGCTCTATGTTaGAGCAACACTGTGACTAGT +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLMSALC*SNTVTS
Trigger: ACTAGTCACAGTGTTGCTGCAACATAGAGCTGACAT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGCCCACTTCTACTCCCTaGGCGTGCAGAGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKPTSTP*ACRAGS
Trigger: GGAGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGG...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGGTGTAAGGCCGGCTTaGAGGCCTGGCCCACCAGTC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLGVRPA*RPGPPV
Trigger: GACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGGGCAGGCAGCCATCCTaGTCTCGGAGAGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKGRQPS*SRRVGS
Trigger: TGACCCCACTCTCCGAGACCAGGATGGCTGCCTGCC...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGAAGGTGACATGGCTGTaGGGAAATGGGAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWKVTWL*GNGRLL
Trigger: CAGGAGTCTCCCATTTCCCCACAGCCATGTCACCTT...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGGCCGTGTTGCCCTCTaGACTTCCAAGGGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGGRVAL*TSKGEV
Trigger: CACTTCCCCCTTGGAAGTCCAGAGGGCAACACGGCC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGATTCCATTATTTTCAATaGAAGTCCTCCGCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGFHYFQ*KSSADS
Trigger: GGAATCAGCGGAGGACTTCCATTGAAAATAATGGAA...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp CCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTaGAATGGAACAAACCAGACTTTAACTAACAGGAAC +
Preference number: 4 (lower is better)
Translates to: PNTRTRLSLYLT*NGTNQTLTNRN
Trigger: GTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGTACAATTTCCAACTTTaGCCTGTTTGTACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLYNFQL*PVCTWH
Trigger: ATGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTA...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGACGGGAAACGCGAGGCTaGGGACTAAGGTTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARRETRG*GLRFRL
Trigger: CAGGCGGAACCTTAGTCCTCAGCCTCGCGTTTCCCG...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTATCTACTCCCTGGGCGTaGAGAGCAGGCTCCTCGACC +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVSTPWA*RAGSST
Trigger: GGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTAGA...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACGTGACCCTGCTCCCTaGCCACTTCTACTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVRDPAP*PLLLPG
Trigger: CCCAGGGAGTAGAAGTGGGCAGGGAGCAGGGTCACG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGATAATGGAAGCCTTATaGTATTACAGACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQIMEAL*YYRLQF
Trigger: AAACTGCAGTCTGTAATAGCATAAGGCTTCCATTAT...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTGGTGCAGGAGTCAGTaGCATGAGAGTGGGGACCTC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSWCRSQ*HESGDL
Trigger: GAGGTCCCCACTCTCATGGCACTGACTCCTGCACCA...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGCTCGGCCAGGCAACTaGTCTCCTCGATCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLARPGN*SPRSQG
Trigger: GCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAATGGCTTTGGTTATATaGTCAATGTTGTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLMALVI*SMLFSL
Trigger: CAGGGAAAACAACATTGACCATATAACCAAAGCCAT...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACCATATTGGTGTGTCTaGCCCATGCTTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLPYWCV*PMLGCK
Trigger: CTTGCAGCCAAGCATGGGTCAGACACACCAATATGG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGATCAGGCCTTGCAGGTaGGCGGCAGCCTTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKIRPCR*AAAFSN
Trigger: GTTTGAGAAGGCTGCCGCGCACCTGCAAGGCCTGAT...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGCCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWPKKLF*SLSPPL
Trigger: CAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGG...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGCCTTGCCAGTTGTGTaGCGCTGCAGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGALPVV*RCSTKE
Trigger: TTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTGGCTGCAAGGCAGCTaGCATCCTTGGGCATCTTTC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSWLQGS*HPWASF
Trigger: GAAAGATGCCCAAGGATGGCAGCTGCCTTGCAGCCA...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTATGGGAATTTAGTCTTTaGAGGTGTTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: PRALGTLACWVSPLLFCLWEFSL*RCFLFF
Trigger: GAAAAACAAGAAACACCTGCAAAGACTAAATTCCCA...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGTCTCCCCTGCTGTTCTaGTTAGGGGCTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMSPLLF*LGAWLL
Trigger: GAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGA...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCTGGACGTCCTTCCCTaGCGGAGGAGAGAAAGTGCC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLLDVLP*RRRESA
Trigger: GGCACTTTCTCTCCTCCGGCAGGGAAGGACGTCCAG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTCGATCTCAGGGCTATaGGGGAACTCCACCTCCCCG +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLSISGL*GNSTSP
Trigger: CGGGGAGGTGGAGTTCCCCCATAGCCCTGAGATCGA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACCTGGTCTCGGAGAGTaGGGTCAGCACCAGACTGGA +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVPGLGE*GQHQTG
Trigger: TCCAGTCTGGTGCTGACCCCACTCTCCGAGACCAGG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGCTTTGGGTTTGTGGTaGACGCCCCCTGAGTATGTC +
Preference number: 4 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGALGLW*TPPEYV
Trigger: GACATACTCAGGGGGCGTCCACCACAAACCCAAAGC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGGTACCTGACTTTGAATaGAACAAACCAGACTTTAAC +
Preference number: 4 (lower is better)
Translates to: LASGYQAAILVCLTHAWLVPDFE*NKPDFN
Trigger: GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTAC...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGTACCTGACTTTGAATaGAACAAACCAGACTTTAAC +
Preference number: 4 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGVPDFE*NKPDFN
Trigger: GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTAC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACTTCCCCTTTGTCTTTTaGAATGACTCTCTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNFPFVF*NDSLSS
Trigger: ACTACTTAGAGAGTCATTCCAAAAGACAAAGGGGAA...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTAATCAGGAGAACAAATaGAAGCTCCGCAGTCGGTGT +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLNQENK*KLRSRC
Trigger: ACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATT...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCGATCACAGGCCCAGTaGAGTAGAGCCCTACCCTCT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLRSQAQ*SRALPS
Trigger: AGAGGGTAGGGCTCTACTTCACTGGGCCTGTGATCG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTCTCATCTGGGCTGTTaGAGTCAACACCAAACATTT +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNSHLGC*SQHQTF
Trigger: AAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAGAAGCCATGTCTCCTTaGTCGCTCCGTCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVEAMSP*SLRPSV
Trigger: CACAGAGGGACGGAGCGAGCAAGGAGACATGGCTTC...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGACAAGAGCTGCTCCCTaGTGGCCACCTGAATCAGGC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLTRAAP*WPPESG
Trigger: GCCTGATTCAGGTGGCCAGCAGGGAGCAGCTCTTGT...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTACAAGAGCTGCTCCCTaGTGGCCACCTGAATCAGGC +
Preference number: 4 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTTRAAP*WPPESG
Trigger: GCCTGATTCAGGTGGCCAGCAGGGAGCAGCTCTTGT...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGGATCAGTCAGTGTGTTaGCCAGAACATTCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWDQSVC*PEHSLD
Trigger: GTCTAAGGAATGTTCTGGGCAACACACTGACTGATC...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGTGTGCCTTCTTCAATTaGTTGTATCATTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: NTALTRTETPKVEASQPLCAFFN*LYHLFH
Trigger: GTGGAATAAATGATACAAGCAATTGAAGAAGGCACA...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAGGGTCAGCACCAGACTaGAGCAGCAGCTCTACAATA +
Preference number: 4 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGGSAPD*SSSSTI
Trigger: TATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCC...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGGGGCTTTGGGTTTGTaGTGGACGCCCCCTGAGTAT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLGALGL*WTPPEY
Trigger: ATACTCAGGGGGCGTCCACCACAAACCCAAAGCCCC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCTTCCAAGGGGGAAGTaGGTTACTGGCCCAAGTCAC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLLPRGK*VTGPSH
Trigger: GTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGATGTCAGCTCTATGTTaGAGCAACACTGTGACTAGT +
Preference number: 4 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWMSALC*SNTVTS
Trigger: ACTAGTCACAGTGTTGCTGCAACATAGAGCTGACAT...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGCCTTGCCAGTTGTGTaGCGCTGCAGCACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLALPVV*RCSTKE
Trigger: TTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTACTCTGGATATCAGGCTaGCATATTGGTGTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLLWISG*HIGVSD
Trigger: GTCAGACACACCAATATGGCAGCCTGATATCCAGAG...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGAGCAGAGAAAGGACTaGTGTCCTCACTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: RALQRMHVMNPQVVCKESEQRKD*CPHFSV
Trigger: CACTGAAAAGTGAGGACAGCAGTCCTTTCTCTGCTC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGAGCAGAGAAAGGACTaGTGTCCTCACTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSEQRKD*CPHFSV
Trigger: CACTGAAAAGTGAGGACAGCAGTCCTTTCTCTGCTC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTGCATAATTCAAAGTTaGATCAGACACTCCCGTGTA +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNCIIQS*IRHSRV
Trigger: TACACGGGAGTGTCTGATGCAACTTTGAATTATGCA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGCCTGCATTGCTTGGCTaGGGCTTGAATCACCAAGTG +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKPALLG*GLNHQV
Trigger: CACTTGGTGATTCAAGCCCCAGCCAAGCAATGCAGG...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCGCTTCTTGGCAGGATTaGGAAAGTCAATCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSASWQD*ESQSHL
Trigger: CAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGC...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTCCTGTCCTTTCCCCTTaGGCCCAGGATTCTACTCAG +
Preference number: 4 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTPVLSP*AQDSTQ
Trigger: CTGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGG...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
3UTR CAA 72 bp AATGTGGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATaGGGAAAGTCAATCTCATCTGGGCTGTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: NVEGLLLGFLAG*GKSISSGLLKS
Trigger: TGACTTCAACAGCCCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCCACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTAGTTTTCCAGTCTTTTaGTTAAGCCTTGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLSFPVF*LSLASC
Trigger: ACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACT...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGGCTTTTGCCAGAACTaGAGACAGAGTTCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLGFCQN*RQSSEA
Trigger: GGCCTCAGAACTCTGTCTTCAGTTCTGGCAAAAGCC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACCCCATTCTCTTCATCTaGTTTCCTGTTTTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNPILFI*FPVLVL
Trigger: CAAAACTAAAACAGGAAATCAGATGAAGAGAATGGG...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATCCTGGCTGCACAGCTaGTTCATTCCTCTAGTGCCT +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARSWLHS*FIPLVP
Trigger: AGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGGGTCAGCACCAGACTaGAGCAGCAGCTCTACAATA +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLGSAPD*SSSSTI
Trigger: TATTGTAGAGCTGCTGCTCCAGTCTGGTGCTGACCC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGTTCCCCTTTGTCTTTTaGAATGACTCTCTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLFPFVF*NDSLSS
Trigger: ACTACTTAGAGAGTCATTCCAAAAGACAAAGGGGAA...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645415.1
3UTR CAA 72 bp AGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATTTCTGGACCATCCTTA +
Preference number: 4 (lower is better)
Translates to: RTETPKVEASQP*SKIKVISGPSL
Trigger: TAAGGATGGTCCAGAAATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGGTTGCAGCAACACTGTaGCTAGTTCCTTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMVAATL*LVPYVL
Trigger: GAGGACATAAGGAACTAGTCACAGTGTTGCTGCAAC...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACCAGTTGTGTGCCGCTaGAGCACCAAAGAAACTGTT +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVPVVCR*STKETV
Trigger: AACAGTTTCTTTGGTGCTGCAGCGGCACACAACTGG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCGATCAGTCAGTGTGTTaGCCAGAACATTCCTTAGAC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSDQSVC*PEHSLD
Trigger: GTCTAAGGAATGTTCTGGGCAACACACTGACTGATC...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AGTCTTTTGATTAAGCCTTGCCAGTTGTGTGCCGCTGCAGCACCAAAGAAACTGTGTGCCTTCTTCAATTaGTTGTATCATTTATTCCAC +
Preference number: 4 (lower is better)
Translates to: SLLIKPCQLCAAAAPKKLCAFFN*LYHLFH
Trigger: GTGGAATAAATGATACAAGCAATTGAAGAAGGCACA...CAGTTTCTTTGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR TCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAGTTGCAGCAACACTGTaGCTAGTTCCTTATGTCCTC +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVVAATL*LVPYVL
Trigger: GAGGACATAAGGAACTAGTCACAGTGTTGCTGCAAC...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR TCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATCTAGGACTTTGTGTTaGTCAGTCAGTGTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARSRTLC*SVSVLP
Trigger: GGGCAACACACTGACTGATCAACACAAAGTCCTAGA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAACTGCGATATATTCCTaGATTGCTTGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVTAIYS*IAWLGL
Trigger: AAGCCCCAGCCAAGCAATGCAGGAATATATCGCAGT...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGAACTGCGATATATTCCTaGATTGCTTGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARTAIYS*IAWLGL
Trigger: AAGCCCCAGCCAAGCAATGCAGGAATATATCGCAGT...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACCAAAGAAACTGTTTTaGAGCCTGTCACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVPKKLF*SLSPPL
Trigger: CAGAGGAGGTGACAGGCTGCAAAACAGTTTCTTTGG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACTTTTGATTAAGCCTTaGCAGTTGTGTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVLLIKP*QLCAAA
Trigger: TGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR GCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTCTTTTGATTAAGCCTTaGCAGTTGTGTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTLLIKP*QLCAAA
Trigger: TGCAGCGGCACACAACTGGCAAGGCTTAATCAAAAG...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTATTCCTGCATTGCTTaGCTGGGGCTTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLYSCIA*LGLESP
Trigger: TGGTGATTCAAGCCCCAGCCAAGCAATGCAGGAATA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATTTTTCTCCTTGGCCTaGGTTGGCCTCTGGATATCA +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARFFSLA*VGLWIS
Trigger: TGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCAAAGTCAATCTCATCTaGGCTGTTGAAGTCAACACC +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSKVNLI*AVEVNT
Trigger: GGTGTTGACTTCAACAGCCCAGATGAGATTGACTTT...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCCTTGGTGCACAGTGTaGCTTCTTCAATTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLPWCTV*LLQLLV
Trigger: TACAAGCAATTGAAGAAGGCACACTGTGCACCAAGG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGACATGACAGGGACGTGTaGAATTGGGTACATTCAATC +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARHDRDV*NWVHSI
Trigger: GATTGAATGTACCCAATTCCACACGTCCCTGTCATG...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCAATAAAAGTGATTTCTaGACCATCCTTATTGAACCC +
Preference number: 4 (lower is better)
Translates to: GKSISSGLLKSTPNICPSNKSDF*TILIEP
Trigger: GGGTTCAATAAGGATGGTCCAGAAATCACTTTTATT...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCCCACATTTTTCGATTTaGTGGCTTTGGTTATATGGT +
Preference number: 4 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSPHFSI*WLWLYG
Trigger: ACCATATAACCAAAGCCATCAAATCGAAAAATGTGG...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGATGTCAGCTCTATGTTaGAGCAACACTGTGACTAGT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLMSALC*SNTVTS
Trigger: ACTAGTCACAGTGTTGCTGCAACATAGAGCTGACAT...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTATGGGAATTTAGTCTTTaGAGGTGTTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLWEFSL*RCFLFF
Trigger: GAAAAACAAGAAACACCTGCAAAGACTAAATTCCCA...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTAAAGTCAATCTCATCTaGGCTGTTGAAGTCAACACC +
Preference number: 4 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTKVNLI*AVEVNT
Trigger: GGTGTTGACTTCAACAGCCCAGATGAGATTGACTTT...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TATAAAGTCCTTAGTCAACACCAGCACATGGTAGGTGCTAACACATGTTGGCTAAATAAAAGTGATTTCTaGACCATCCTTATTGAACCC +
Preference number: 4 (lower is better)
Translates to: YKVLSQHQHMVGANTCWLNKSDF*TILIEP
Trigger: GGGTTCAATAAGGATGGTCCAGAAATCACTTTTATT...TAGCCAACATGTGTTAGCACCTACCATGTGCTGGTGTTGACTAAGGACTTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTACAATTTCCAACTTTaGCCTGTTTGTACCTGGCAT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLYNFQL*PVCTWH
Trigger: ATGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAAGTTTTCCAGTCTTTTaGTTAAGCCTTGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVSFPVF*LSLASC
Trigger: ACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACT...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR TCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGAAGTTTTCCAGTCTTTTaGTTAAGCCTTGCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARSFPVF*LSLASC
Trigger: ACAACTGGCAAGGCTTAATCAAAAGACTGGAAAACT...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATGCATAATTCAAAGTTaGATCAGACACTCCCGTGTA +
Preference number: 4 (lower is better)
Translates to: NLFWFLSVPSISLTLMARCIIQS*IRHSRV
Trigger: TACACGGGAGTGTCTGATGCAACTTTGAATTATGCA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGATGGCTTTGGTTATATaGTCAATGTTGTTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKMALVI*SMLFSL
Trigger: CAGGGAAAACAACATTGACCATATAACCAAAGCCAT...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
3UTR CAA 72 bp TTGAATGGAACAAACCAGACTTTAACTAACAGGAACTaGAGCTTGTTCACTCAAAATCTGTCTAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: LNGTNQTLTNRN*SLFTQNLSRTL
Trigger: CAAAGTCCTAGACAGATTTTGAGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR TCA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCCACATTTTTCGATTTaGTGGCTTTGGTTATATGGT +
Preference number: 4 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLPHFSI*WLWLYG
Trigger: ACCATATAACCAAAGCCATCAAATCGAAAAATGTGG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR GCA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGATAATGGAAGCCTTATaGTATTACAGACTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: STELILLANTYQRRVEKKIMEAL*YYRLQF
Trigger: AAACTGCAGTCTGTAATAGCATAAGGCTTCCATTAT...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS GCA 90 bp TACTCCCTGGGCGTGCAGAGCAGGCTCCTCGACCCTCTGCCGCTCTaGCCAGTCGACCCGGTCTCCTCCGGCTTCCCTCCGGCCAACAGC +
Preference number: 5 (lower is better)
Translates to: YSLGVQSRLLDPLPL*PVDPVSSGFPPANS
Trigger: GCTGTTGGCCGGAGGGAAGCCGGAGGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp CCCACTTCTACTCCCTGGGCGTGCAGAGCAGGCTCCTCGACCCTCTaGCGCTCTGCCCAGTCGACCCGGTCTCCTCCGGCTTCCCTCCGG +
Preference number: 5 (lower is better)
Translates to: PTSTPWACRAGSSTL*RSAQSTRSPPASLR
Trigger: CCGGAGGGAAGCCGGAGGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp ACCCAAGCTCAGTCGCGGCGCGCTCCCTCACGTGACCCTGCTCCCTaGCCACTTCTACTCCCTGGGCGTGCAGAGCAGGCTCCTCGACCC +
Preference number: 5 (lower is better)
Translates to: TQAQSRRAPSRDPAP*PLLLPGRAEQAPRP
Trigger: GGGTCGAGGAGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGGCAGGGAGCAGGGTCACGTGAGGGAGCGCGCCGCGACTGAGCTTGGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTCCGCCTGCCCCAGATaGTGCGCCCCAAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSSACPR*CAPSAS
Trigger: GGAGGCGCTTGGGGCGCACAATCTGGGGCAGGCGGA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp CTTGGATTGGGTGTAAGGCCGGCTTGGAGGCCTGGCCCACCAGTCTaGGTCGCGAGCCTGAGCTCCAGTCGGACCCAAGCTCAGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LGLGVRPAWRPGPPV*VASLSSSRTQAQSR
Trigger: CCGCGACTGAGCTTGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp CCGGTCTGTCCTCCTTGGATTGGGTGTAAGGCCGGCTTGGAGGCCTaGCCCACCAGTCTGGGTCGCGAGCCTGAGCTCCAGTCGGACCCA +
Preference number: 5 (lower is better)
Translates to: PVCPPWIGCKAGLEA*PTSLGREPELQSDP
Trigger: TGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCCTGGGGGCTTTGGGTTaGTGGTGGACGCCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFLGALG*WWTPPE
Trigger: CTCAGGGGGCGTCCACCACAAACCCAAAGCCCCCAG...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS TCA 90 bp TGTGGTAGTGTAGCGGTGAGAGCGGAGTCGCGGGAAACGCGAGGCTaGGGACTAAGGTTCCGCCTGCCCCAGATTGTGCGCCCCAAGCGC +
Preference number: 5 (lower is better)
Translates to: CGSVAVRAESRETRG*GLRFRLPQIVRPKR
Trigger: GCGCTTGGGGCGCACAATCTGGGGCAGGCGGAACCTTAGTCCTCAGCCTCGCGTTTCCCGCGACTCCGCTCTCACCGCTACACTACCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp CTCTGTGTCCGGTCTGTCCTCCTTGGATTGGGTGTAAGGCCGGCTTaGAGGCCTGGCCCACCAGTCTGGGTCGCGAGCCTGAGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: LCVRSVLLGLGVRPA*RPGPPVWVASLSSS
Trigger: ACTGGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGGACACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp CTTGCAGGTGCGCGGCAGCCTTCTCAAACAGCTCGGCCAGGCAACTaGTCTCCTCGATCTCAGGGCTATGGGGGAACTCCACCTCCCCGG +
Preference number: 5 (lower is better)
Translates to: LAGARQPSQTARPGN*SPRSQGYGGTPPPR
Trigger: CCGGGGAGGTGGAGTTCCCCCATAGCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGCTGTTTGAGAAGGCTGCCGCGCACCTGCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp CCGGTGATGGCCCCCGCGGGCAGGAATGATGAAGCCATGTCTCCTTaGTCGCTCCGTCCCTCTGTGTCCGGTCTGTCCTCCTTGGATTGG +
Preference number: 5 (lower is better)
Translates to: PVMAPAGRNDEAMSP*SLRPSVSGLSSLDW
Trigger: CCAATCCAAGGAGGACAGACCGGACACAGAGGGACGGAGCGAGCAAGGAGACATGGCTTCATCATTCCTGCCCGCGGGGGCCATCACCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp TGTCTCCTTGCTCGCTCCGTCCCTCTGTGTCCGGTCTGTCCTCCTTaGATTGGGTGTAAGGCCGGCTTGGAGGCCTGGCCCACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: CLLARSVPLCPVCPP*IGCKAGLEAWPTSL
Trigger: CAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGGACACAGAGGGACGGAGCGAGCAAGGAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTCCACTCTGATGTCCCCTGTGCCTCGCGCTGTCCTGCCTACAGCAGGCAGGCTTCTCCTTGGCCTGGGTaGGCCTCTGGATATCAGGCT +
Preference number: 5 (lower is better)
Translates to: LHSDVPCASRCPAYSRQASPWPG*ASGYQA
Trigger: AGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGA...AGCCTGCCTGCTGTAGGCAGGACAGCGCGAGGCACAGGGGACATCAGAGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCGCTTCAGGGAGGGAGTaGGGCCACAGTAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFASGRE*GHSSSG
Trigger: CCCGGAACTACTGTGGCCCAACTCCCTCCCTGAAGC...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCTCTAGGGACACTGGCTaGTTGGGTCTCTCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: EGVGRIALPDLCSIQASVSRDTG*LGLSPA
Trigger: AGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGA...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp GCCAACCCCCGCTTTACGAGTTGCCACTCCTGCGACAGACTGCACTaGTGTGGGAAACGCTGTCCTGAATGGTGCTGCAGCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: ANPRFTSCHSCDRLH*CGKRCPEWCCSSHP
Trigger: TGGGTGGGAGCTGCAGCACCATTCAGGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGGGGGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGGTGTCTGACCCATGCTaGGCTGCAAGGCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPVSDPC*AARQLP
Trigger: TGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACAC...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCGCTTGTGTGGCAGGTTaGGTTTCAGAACAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFACVAG*VSEQKG
Trigger: GCCCTTCTGTTCTGAAACCAAACCTGCCACACAAGC...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTTGGGTTTGTGGTGGACGCCCCCTGAGTATGTCCCTTGTGCTTGTGTGGCAGTCAGCTCACGGGTGGTaGGGCTCAGGGCTTGACCCC +
Preference number: 5 (lower is better)
Translates to: LWVCGGRPLSMSLVLVWQSAHGW*GSGLDP
Trigger: GGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTGA...CTGCCACACAAGCACAAGGGACATACTCAGGGGGCGTCCACCACAAACCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGAGGGAGTaGGGCCACAGTAGTTCCGGG +
Preference number: 5 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRASGRE*GHSSSG
Trigger: CCCGGAACTACTGTGGCCCAACTCCCTCCCTGAAGC...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCGTTCTGCTTAGGGGCTaGGCTGCTCAGTGCTTTGGT +
Preference number: 5 (lower is better)
Translates to: EGVGRIALPDLCSIQASVVLLRG*AAQCFG
Trigger: ACCAAAGCACTGAGCAGCCAAGCCCCTAAGCAGAAC...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS TCA 90 bp GATGTGCTTGGGGAAAGCCTGGCACATTTGTATACCTGGAAGGCATaGTCGTTCCCACAGGGAGCGTGTGGCTCCCGCAGAGGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: DVLGESLAHLYTWKA*SFPQGACGSRRGPW
Trigger: CCAGGGCCCTCTGCGGGAGCCACACGCTCCCTGTGGGAACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp CCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTaGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: PCLGLQSHGQKARTL*PVVVQGLPVVQVCS
Trigger: ACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp CTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAGGCCGTCTGTCCTCCTTGGATaGGGTGTAAGGCCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: LAAQLLHSSSASQDQGRPSVLLG*GVRPAW
Trigger: CCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGA...CGGCCTGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCTCTGTCCTCCTTGGATaGGGTGTAAGGCCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCSVLLG*GVRPAW
Trigger: CCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGA...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGCTGGGGGCTTTGGGTTaGTGGTGGACGCCCCCTGAG +
Preference number: 5 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGLGALG*WWTPPE
Trigger: CTCAGGGGGCGTCCACCACAAACCCAAAGCCCCCAG...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGGGGGTCCTGGGGGCTTaGGGTTTGTGGTGGACGCCC +
Preference number: 5 (lower is better)
Translates to: NTALTRTETPKVEASQPLGVLGA*GLWWTP
Trigger: GGGCGTCCACCACAAACCCAAAGCCCCCAGGACCCC...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGGGGTCCTGGGGGCTTaGGGTTTGTGGTGGACGCCC +
Preference number: 5 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNGVLGA*GLWWTP
Trigger: GGGCGTCCACCACAAACCCAAAGCCCCCAGGACCCC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCTTGACCCCAGGGCTTTaGCCAGAACTGAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: EGVGRIALPDLCSIQASVLTPGL*PELKTE
Trigger: CTCTGTCTTCAGTTCTGGCAAAAGCCCTGGGGTCAA...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTTCAGCTCACGGGTGGTaGGGCTCAGGGCTTGACCCC +
Preference number: 5 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTSAHGW*GSGLDP
Trigger: GGGGTCAAGCCCTGAGCCCAACCACCCGTGAGCTGA...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGGCTTCAGGGTGGCTGCTCAGTGCTTaGGTAGCACAAGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: VSVAGAPESLPFGFRASGWLLSA*VAQGDC
Trigger: ACAGTCACCTTGTGCTACCAAAGCACTGAGCAGCCA...CCCTGAAGCCCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCTCTAGGGACACTGGCTaGTTGGGTCTCTCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFSRDTG*LGLSPA
Trigger: AGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGA...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp ACTCTCTGGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTaGAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAAGGCCAACCC +
Preference number: 5 (lower is better)
Translates to: TLWPVVVQGLPVVQV*SSKSLSLRPEQGQP
Trigger: GGGTTGGCCTTGCTCTGGCCTCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 90 bp TGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTaGAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGG +
Preference number: 5 (lower is better)
Translates to: CISLDCWLDTCHALG*SPMVRKPELSGQWW
Trigger: CCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp TGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTTaGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: WAASLWIAGWTPAMP*AAVPWSESQNSLAS
Trigger: ACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp AGCTGTTTGGCCTTCATTGTCCCTTCAGGGCAGTGGGCTCCCCTCTaGCCCACGACAAGTCCAGAAGGCTATCCAAGGCTTGTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: SCLAFIVPSGQWAPL*PTTSPEGYPRLVWS
Trigger: GGACCAGACAAGCCTTGGATAGCCTTCTGGACTTGTCGTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGACAATGAAGGCCAAACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGCACCTGAATCAGGCCTaGCAGGTGCGCGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGHLNQA*QVRGSL
Trigger: AAGGCTGCCGCGCACCTGCAAGGCCTGATTCAGGTG...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp GTTCTTGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATaGCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VLGLHLSGLLAGHLP*LGLQSHGQKARTLW
Trigger: CCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp GGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTaGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAATCAC +
Preference number: 5 (lower is better)
Translates to: GCSPMVRKPELSGQW*CRDSPLCRFAVANH
Trigger: GTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGATTAAGCCTTGCCAGTaGTGTGCCGCTGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRIKPCQ*CAAAAP
Trigger: TGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAAT...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCGGCTTCTTGGCAGGATaGGGAAAGTCAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: EGVGRIALPDLCSIQASVGFLAG*GKSISS
Trigger: AGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCC...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGTCAGGGCAGGCCGTGTaGCCCTCTGGACTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: NTALTRTETPKVEASQPLSGQAV*PSGLPR
Trigger: CCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGA...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCTTTGGAGGTTCCCCTTaGTCTTTTGGAATGACTCTC +
Preference number: 5 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSFGGSP*SFGMTL
Trigger: GAGAGTCATTCCAAAAGACAAAGGGGAACCTCCAAA...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACGACCACCGCTGCAGATaGCCTGAGTCGTCCCCTTGG +
Preference number: 5 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNDHRCR*PESSPW
Trigger: CCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTC...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GTTGCCCTCTGGACTTCCAAGGGGGAAGTGAGTTACTGGCCCAAGTCACTCACTGGGGAAGGAGGCCGTTaGTGTGGTAGTGTAGCGGTG +
Preference number: 5 (lower is better)
Translates to: VALWTSKGEVSYWPKSLTGEGGR*CGSVAV
Trigger: CACCGCTACACTACCACACAAACGGCCTCCTTCCCC...AGTGAGTGACTTGGGCCAGTAACTCACTTCCCCCTTGGAAGTCCAGAGGGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp AAGTGGTTCTTGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTaGCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: KWFLGCISLDCWLDT*HALGCSPMVRKPEL
Trigger: GAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 90 bp TGTCCAAAGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTGGATTaGTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTC +
Preference number: 5 (lower is better)
Translates to: CPKGSKWFLGCISLD*WLDTCHALGCSPMV
Trigger: GACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTTAGAACCCTTTGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp TTGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTaGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCAAAT +
Preference number: 5 (lower is better)
Translates to: LGCSPMVRKPELSGQ*WCRDSPLCRFAVAN
Trigger: ATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp AGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTGGATTGCTGGCTaGACACCTGCCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAGC +
Preference number: 5 (lower is better)
Translates to: RVLSGSWAASLWIAG*TPAMPWAAVPWSES
Trigger: GCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTTAGAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCATTGCTTGGCTGGGGCTaGAATCACCAAGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPLLGWG*NHQVLS
Trigger: GGAAAGCACTTGGTGATTCAAGCCCCAGCCAAGCAA...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCAAGAGGTGGTTTTCATaGCAGGTGACTGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCKRWFS*QVTEAE
Trigger: CTCAGCCTCAGTCACCTGCAATGAAAACCACCTCTT...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGGAGAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCTTACAATTTCCAACTTaGACCTGTTTGTACCTGGCA +
Preference number: 5 (lower is better)
Translates to: GRGGGAHRTPRPVLHSGFLQFPT*TCLYLA
Trigger: TGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTAA...GAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGTGTCTGACCCATGCTaGGCTGCAAGGCAGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWVSDPC*AARQLP
Trigger: TGGCAGCTGCCTTGCAGCCAAGCATGGGTCAGACAC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTGACCCCAGGGCTTTaGCCAGAACTGAAGACAGAG +
Preference number: 5 (lower is better)
Translates to: EGRASGATLNMTSTWLFTLTPGL*PELKTE
Trigger: CTCTGTCTTCAGTTCTGGCAAAAGCCCTGGGGTCAA...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCCAGGGACGTGTGGAATaGGGTACATTCAATCTGATG +
Preference number: 5 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFQGRVE*GTFNLM
Trigger: CATCAGATTGAATGTACCCAATTCCACACGTCCCTG...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CGGCACCGCTGGGGGCAGTTCTATAAGAGCGTCAAGAGGAGCCGGGGCAGCAGCACTTTGATGGCCAGTTaGATATTAAAAACATGCCCC +
Preference number: 5 (lower is better)
Translates to: RHRWGQFYKSVKRSRGSSTLMAS*ILKTCP
Trigger: GGGGCATGTTTTTAATATCAAACTGGCCATCAAAGT...GCTGCTGCCCCGGCTCCTCTTGACGCTCTTATAGAACTGCCCCCAGCGGTGCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCATCCTGTCCTTTCCCCTaGGGCCCAGGATTCTACTCA +
Preference number: 5 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRASCPFP*GPGFYS
Trigger: TGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGA...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp GCACCCCAACAGCCCGCTTGGCGTTCTAGCCCATTGTGGCTGAGCTaGTACCTGACAGTTAATGTCAGCTCTATGTTGCAGCAACACTGT +
Preference number: 5 (lower is better)
Translates to: APQQPAWRSSPLWLS*YLTVNVSSMLQQHC
Trigger: ACAGTGTTGCTGCAACATAGAGCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTGTTGGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS CCA 90 bp TGGAATCAGGCACCCCAACAGCCCGCTTGGCGTTCTAGCCCATTGTaGCTGAGCTGGTACCTGACAGTTAATGTCAGCTCTATGTTGCAG +
Preference number: 5 (lower is better)
Translates to: WNQAPQQPAWRSSPL*LSWYLTVNVSSMLQ
Trigger: CTGCAACATAGAGCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTGTTGGGGTGCCTGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS-3UTR CAA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGATTAAGCCTTGCCAGTaGTGTGCCGCTGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: NTALTRTETPKVEASQPLIKPCQ*CAAAAP
Trigger: TGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAAT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AGTAGTGTAGTCTCTGTGGCAGGGGCTCCGGAATCCCTACCCTTCGGGTTCAGGCAGGGACGTGTGGAATaGGGTACATTCAATCTGATG +
Preference number: 5 (lower is better)
Translates to: SSVVSVAGAPESLPFGFRQGRVE*GTFNLM
Trigger: CATCAGATTGAATGTACCCAATTCCACACGTCCCTG...CCTGAACCCGAAGGGTAGGGATTCCGGAGCCCCTGCCACAGAGACTACACTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGGCATCTGGGGCGACTTaGAACATGACTTCAACCTGG +
Preference number: 5 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGASGAT*NMTSTW
Trigger: CCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGC...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACTGGCCTTTGGGAACTTaGCTCCAACTGGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: SLAWVGLWISGCHIGVSDWPLGT*LQLVCL
Trigger: GAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCA...GTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTAGAAGGCTGTGAGACCACACTAGGGCATTGTTTCCCTGGGGAAGCAGTGGGATGGCCTTTGGGAACTTaGCTCCAACTGGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: LEGCETTLGHCFPGEAVGWPLGT*LQLVCL
Trigger: GAGACACACCAGTTGGAGCAAAGTTCCCAAAGGCCA...TCCCACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTCTCACAGCCTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGGACCACACTAGGGCATaGTTTCCCTGGGGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: LASGYQAAILVCLTHAWLDHTRA*FPWGSS
Trigger: ACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTC...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCATCCGCCTGCCCCAGATaGTGCGCCCCAAGCGCCTCC +
Preference number: 5 (lower is better)
Translates to: RALQRMHVMNPQVVCKESSACPR*CAPSAS
Trigger: GGAGGCGCTTGGGGCGCACAATCTGGGGCAGGCGGA...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp AAAATTGTCCAAAGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTaGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTGCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: KIVQRVLSGSWAASL*IAGWTPAMPWAAVP
Trigger: TGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTTAGAACCCTTTGGACAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCATATCAGGCTGCCATATaGGTGTGTCTGACCCATGCT +
Preference number: 5 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAYQAAI*VCLTHA
Trigger: AGCATGGGTCAGACACACCAATATGGCAGCCTGATA...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGGTGGGGCGCATCGCACTCCCAGACCTGTGCTCCATTCAGGCTTCAGTCGTGTGCCTTCTTCAATaGCTTGTATCATTTATTCCA +
Preference number: 5 (lower is better)
Translates to: EGVGRIALPDLCSIQASVVCLLQ*LVSFIP
Trigger: TGGAATAAATGATACAAGCAATTGAAGAAGGCACAC...GACTGAAGCCTGAATGGAGCACAGGTCTGGGAGTGCGATGCGCCCCACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCAGTCCCATCTATATCATaGACTCTGATGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPVPSIS*TLMARG
Trigger: ACCTCTTGCCATCAGAGTCAATGATATAGATGGGAC...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCEASQP*SKIKVI
Trigger: AATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTC...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGTCCTGTCCTTTCCCCTaGGGCCCAGGATTCTACTCA +
Preference number: 5 (lower is better)
Translates to: SGATLNMTSTWLFTFTALSCPFP*GPGFYS
Trigger: TGAGTAGAATCCTGGGCCCAAGGGGAAAGGACAGGA...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACGGGGAAGGAGGCCGTTaGTGTGGTAGTGTAGCGGTG +
Preference number: 5 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNGEGGR*CGSVAV
Trigger: CACCGCTACACTACCACACAAACGGCCTCCTTCCCC...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp GTGGAAATAGAAAAGGAAGTTTGTGGGACAGAGGATGGAACAAGTTaGCTGCCAGGACAACGATGCCCTGGGAGGACTCTAGTTCAGCCC +
Preference number: 5 (lower is better)
Translates to: VEIEKEVCGTEDGTS*LPGQRCPGRTLVQP
Trigger: GGGCTGAACTAGAGTCCTCCCAGGGCATCGTTGTCCTGGCAGGCAACTTGTTCCATCCTCTGTCCCACAAACTTCCTTTTCTATTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp ATGTGGAAGGTCTTCTGCGGAGGGGGAAAGGGAAGAGTACTCAACTaGCGATCAGAGACCTGGTTTCCAGTGCAGCTCTGTCAAATCGAT +
Preference number: 5 (lower is better)
Translates to: MWKVFCGGGKGRVLN*RSETWFPVQLCQID
Trigger: ATCGATTTGACAGAGCTGCACTGGAAACCAGGTCTCTGATCGCCAGTTGAGTACTCTTCCCTTTCCCCCTCCGCAGAAGACCTTCCACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCCTTCTTTTAGGCTTCTaGGCAGGATTGGGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: EGRASGATLNMTSTWLFTLLLGF*AGLGKS
Trigger: TGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAG...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp GGGATCAATGAACACAACCAACTGTGGATGTGCTTGGGGAAAGCCTaGCACATTTGTATACCTGGAAGGCATGATCGTTCCCACAGGGAG +
Preference number: 5 (lower is better)
Translates to: GINEHNQLWMCLGKA*HICIPGRHDRSHRE
Trigger: CTCCCTGTGGGAACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTCATTGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGCCAACTTTGACCTGTTaGTACCTGGCATACAGGTAC +
Preference number: 5 (lower is better)
Translates to: NTALTRTETPKVEASQPLPTLTC*YLAYRY
Trigger: GTACCTGTATGCCAGGTACAAACAGGTCAAAGTTGG...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGCCAACTTTGACCTGTTaGTACCTGGCATACAGGTAC +
Preference number: 5 (lower is better)
Translates to: LASGYQAAILVCLTHAWLPTLTC*YLAYRY
Trigger: GTACCTGTATGCCAGGTACAAACAGGTCAAAGTTGG...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGCGATATATTCCTGCATaGCTTGGCTGGGGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: LASGYQAAILVCLTHAWLRYIPA*LGWGLN
Trigger: ATTCAAGCCCCAGCCAAGCAATGCAGGAATATATCG...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGTATGTCCCTTGTGCTaGTGTGGCAGGTTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWVCPLC*CGRFGF
Trigger: GAAACCAAACCTGCCACACAAGCACAAGGGACATAC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGAGCAGTGGTTTTTCCTaGCAGATGACTCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWSSGFS*QMTQRL
Trigger: CAGCCTCTGAGTCATCTGCAAGGAAAAACCACTGCT...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAGGGGCTTGGCTGCTCAGTGCTTTAATGAAATGATCTaGCCATTCCATCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: GLLGLSPAVLLRGLAAQCFNEMI*PFHPIL
Trigger: GAGAATGGGATGGAATGGCAAGATCATTTCATTAAA...GCACTGAGCAGCCAAGCCCCTAAGCAGAACAGCAGGGGAGAGACCCAACAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGAAGAGGTGGTTTTCATaGCAGGTGACTGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWKRWFS*QVTEAE
Trigger: CTCAGCCTCAGTCACCTGCAATGAAAACCACCTCTT...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGACCACCGCTGCAGATTGCCTGAGTCGTCCCCTTGGTGCACAGTGTGCCTTCGAATATGAACCTGTTTaGGTTTTTAAGTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: WTTAADCLSRPLGAQCAFEYEPV*VFKCPI
Trigger: GATGGGACACTTAAAAACCAAAACAGGTTCATATTC...GAAGGCACACTGTGCACCAAGGGGACGACTCAGGCAATCTGCAGCGGTGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCAAGGTCAGTGAACACTTaGATGGCCAGTTTGATATTA +
Preference number: 5 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPRSVNT*MASLIL
Trigger: TAATATCAAACTGGCCATCAAAGTGTTCACTGACCT...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTTGCTTGGCTGGGGCTaGAATCACCAAGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNLLGWG*NHQVLS
Trigger: GGAAAGCACTTGGTGATTCAAGCCCCAGCCAAGCAA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGTTTTTCCTTGCAGATGACTCAGAGGCTGGAGCTAAGCGGCCCCGGACCACCATCCACATTTTTCGATTaGATGGCTTTGGTTATATGG +
Preference number: 5 (lower is better)
Translates to: GFSLQMTQRLELSGPGPPSTFFD*MALVIW
Trigger: CCATATAACCAAAGCCATCAAATCGAAAAATGTGGA...TGGTGGTCCGGGGCCGCTTAGCTCCAGCCTCTGAGTCATCTGCAAGGAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGGGCTTCTTGGCAGGATaGGGAAAGTCAATCTCATCT +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWGFLAG*GKSISS
Trigger: AGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCC...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTATCTCTGTACCTGACTTaGAATGGAACAAACCAGACT +
Preference number: 5 (lower is better)
Translates to: PRALGTLACWVSPLLFCLSLYLT*NGTNQT
Trigger: AGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGA...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TTGGCCTCTGGATATCAGGCTGCCATATTGGTGTGTCTGACCCATGCTTGGCTGTTTGGAGGTTCCCCTTaGTCTTTTGGAATGACTCTC +
Preference number: 5 (lower is better)
Translates to: LASGYQAAILVCLTHAWLFGGSP*SFGMTL
Trigger: GAGAGTCATTCCAAAAGACAAAGGGGAACCTCCAAA...CAGCCAAGCATGGGTCAGACACACCAATATGGCAGCCTGATATCCAGAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGAAAAGGAAGGCATTTaGGAGGTTCCCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGEKEGI*EVPLCL
Trigger: AAGACAAAGGGGAACCTCCAAAATGCCTTCCTTTTC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GAGGGGAGGGCATCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCAGGTCAGTGAACACTTaGATGGCCAGTTTGATATTA +
Preference number: 5 (lower is better)
Translates to: EGRASGATLNMTSTWLFTRSVNT*MASLIL
Trigger: TAATATCAAACTGGCCATCAAAGTGTTCACTGACCT...GGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGCCCTCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 90 bp TCTCACTGCGTTGTGGGGATCAATGAACACAACCAACTGTGGATGTaGTTGGGGAAAGCCTGGCACATTTGTATACCTGGAAGGCATGAT +
Preference number: 5 (lower is better)
Translates to: SHCVVGINEHNQLWM*LGKAWHICIPGRHD
Trigger: ATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTCATTGATCCCCACAACGCAGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp ACCTTGTGCACCCATCTACCATCAGGAAGCTCTCCATGTGCAAACTaGAATTTAGCCAGCTGGAATTTATTCCTGTCCCTCTGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: TLCTHLPSGSSPCAN*NLASWNLFLSLWEA
Trigger: AGCTTCCCAGAGGGACAGGAATAAATTCCAGCTGGCTAAATTCCAGTTTGCACATGGAGAGCTTCCTGATGGTAGATGGGTGCACAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp ACAGGTATAGGGAAAAGGCTAACTCATGGCCATTTGACAATGGAGTaGAGCCTTCATCTTCCTGCTCCCTTTAAAGAGCATGAGCTCCCC +
Preference number: 5 (lower is better)
Translates to: TGIGKRLTHGHLTME*SLHLPAPFKEHELP
Trigger: GGGGAGCTCATGCTCTTTAAAGGGAGCAGGAAGATGAAGGCTCCACTCCATTGTCAAATGGCCATGAGTTAGCCTTTTCCCTATACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 90 bp ACTGCGTTGTGGGGATCAATGAACACAACCAACTGTGGATGTGCTTaGGGAAAGCCTGGCACATTTGTATACCTGGAAGGCATGATCGTT +
Preference number: 5 (lower is better)
Translates to: TALWGSMNTTNCGCA*GKPGTFVYLEGMIV
Trigger: AACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTCATTGATCCCCACAACGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCATCTCCTTGGCCTGGGTaGGCCTCTGGATATCAGGCT +
Preference number: 5 (lower is better)
Translates to: RALQRMHVMNPQVVCKESSPWPG*ASGYQA
Trigger: AGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGA...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CCTAGAGCTCTAGGGACACTGGCTTGTTGGGTCTCTCCCCTGCTGTTCTGCTTAAACAGGAACTTGAGCTaGTTCACTCAAAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: PRALGTLACWVSPLLFCLNRNLS*FTQNLS
Trigger: AGACAGATTTTGAGTGAACAAGCTCAAGTTCCTGTT...TAAGCAGAACAGCAGGGGAGAGACCCAACAAGCCAGTGTCCCTAGAGCTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCAAACAGGAACTTGAGCTaGTTCACTCAAAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRANRNLS*FTQNLS
Trigger: AGACAGATTTTGAGTGAACAAGCTCAAGTTCCTGTT...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTACACCTGAATCAGGCCTaGCAGGTGCGCGGCAGCCTT +
Preference number: 5 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVHLNQA*QVRGSL
Trigger: AAGGCTGCCGCGCACCTGCAAGGCCTGATTCAGGTG...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CAA 90 bp TTGGGTACATTCAATCTGATGAGACTTCTGTGCAGCTGGGCTGGCAGGGGAGGGTTCGATTTGATGGCTTaGGTTATATGGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: LGTFNLMRLLCSWAGRGGFDLMA*VIWSML
Trigger: CAACATTGACCATATAACCAAAGCCATCAAATCGAA...CCCTCCCCTGCCAGCCCAGCTGCACAGAAGTCTCATCAGATTGAATGTACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATGTCCTGGCTGCACAGCTGCTTCATTCCTCTAGTGCCTCCCAAGATCAGGGCATTCGATTTGATGGCTTaGGTTATATGGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: MSWLHSCFIPLVPPKIRAFDLMA*VIWSML
Trigger: CAACATTGACCATATAACCAAAGCCATCAAATCGAA...TGCCCTGATCTTGGGAGGCACTAGAGGAATGAAGCAGCTGTGCAGCCAGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTTATCAGGCTGCCATATaGGTGTGTCTGACCCATGCT +
Preference number: 5 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLYQAAI*VCLTHA
Trigger: AGCATGGGTCAGACACACCAATATGGCAGCCTGATA...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGATCACTTTTCAGTGGCTaGGGAAGGCCCGTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGSLFSG*GRPVVQ
Trigger: CTGCACCACGGGCCTTCCCAAGCCACTGAAAAGTGA...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGTCTCTGTACCTGACTTaGAATGGAACAAACCAGACT +
Preference number: 5 (lower is better)
Translates to: SGATLNMTSTWLFTFTALSLYLT*NGTNQT
Trigger: AGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGA...CAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AACCTGTTTTGGTTTTTAAGTGTCCCATCTATATCATTGACTCTGATGGCAAGATCAGGGCAGGCCGTGTaGCCCTCTGGACTTCCAAGG +
Preference number: 5 (lower is better)
Translates to: NLFWFLSVPSISLTLMARSGQAV*PSGLPR
Trigger: CCTTGGAAGTCCAGAGGGCAACACGGCCTGCCCTGA...TCTTGCCATCAGAGTCAATGATATAGATGGGACACTTAAAAACCAAAACAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCTGGCTGCTCAGTGCTTaGGTAGCACAAGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: GKSISSGLLKSTPNICPSWLLSA*VAQGDC
Trigger: ACAGTCACCTTGTGCTACCAAAGCACTGAGCAGCCA...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 90 bp CTACCATCAGGAAGCTCTCCATGTGCAAACTGGAATTTAGCCAGCTaGAATTTATTCCTGTCCCTCTGGGAAGCTGTGTTTGCTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LPSGSSPCANWNLAS*NLFLSLWEAVFASS
Trigger: AGAAGAAGCAAACACAGCTTCCCAGAGGGACAGGAATAAATTCCAGCTGGCTAAATTCCAGTTTGCACATGGAGAGCTTCCTGATGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGCTTGTGTGGCAGGTTaGGTTTCAGAACAGAAGGGC +
Preference number: 5 (lower is better)
Translates to: RALQRMHVMNPQVVCKESACVAG*VSEQKG
Trigger: GCCCTTCTGTTCTGAAACCAAACCTGCCACACAAGC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AACACTGCTCTCACCAGAACTGAGACTCCTAAGGTAGAGGCCTCACAGCCCTTGACATGTTGGCTACTATaGTTTCTAAGAGAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: NTALTRTETPKVEASQPLTCWLL*FLREGF
Trigger: AAAACCCTCTCTTAGAAACAATAGTAGCCAACATGT...CAAGGGCTGTGAGGCCTCTACCTTAGGAGTCTCAGTTCTGGTGAGAGCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGTGCTTCCGAACACACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACACATGTTGGCTACTATaGTTTCTAAGAGAGGGTTTT +
Preference number: 5 (lower is better)
Translates to: CASEHTHAPLSVPDFEWNTCWLL*FLREGF
Trigger: AAAACCCTCTCTTAGAAACAATAGTAGCCAACATGT...GTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGTGTGTTCGGAAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TGGGGCGACTTTGAACATGACTTCAACCTGGCTGTTCACCTTCACAGCTCTGGCGCCTTCTTCAATTGCTaGTATCATTTATTCCACAAG +
Preference number: 5 (lower is better)
Translates to: WGDFEHDFNLAVHLHSSGAFFNC*YHLFHK
Trigger: CTTGTGGAATAAATGATACAAGCAATTGAAGAAGGC...GCCAGAGCTGTGAAGGTGAACAGCCAGGTTGAAGTCATGTTCAAAGTCGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS TCA 90 bp GAATCCTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTaGGTTCTCAAATGTGGAAGGTCTTCTGCGGAGGGGGAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: ESSGCLQRIITVLRY*VLKCGRSSAEGERE
Trigger: TTCCCTTTCCCCCTCCGCAGAAGACCTTCCACATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 90 bp TTTAGCCAGCTGGAATTTATTCCTGTCCCTCTGGGAAGCTGTGTTTaGTTCTTCTGGCCTCCCATTCTCTTAAATGAGATCAGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: FSQLEFIPVPLGSCV*FFWPPILLNEISRV
Trigger: TACTCTGCTGATCTCATTTAAGAGAATGGGAGGCCAGAAGAAGCAAACACAGCTTCCCAGAGGGACAGGAATAAATTCCAGCTGGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTCTGTCCTCCTTGGATaGGGTGTAAGGCCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLSVLLG*GVRPAW
Trigger: CCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAACATTTGTCCATCCCGATATATTCCTGCATaGCTTGGCTGGGGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: GKSISSGLLKSTPNICPSRYIPA*LGWGLN
Trigger: ATTCAAGCCCCAGCCAAGCAATGCAGGAATATATCG...GGATGGACAAATGTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTTGTTTTTCTCCTTGGCCTGGGTTGGCCTCTGGATATCAGGCTGCCATATTGGTTTAATGAAATGATCTaGCCATTCCATCCCATTCTC +
Preference number: 5 (lower is better)
Translates to: LVFLLGLGWPLDIRLPYWFNEMI*PFHPIL
Trigger: GAGAATGGGATGGAATGGCAAGATCATTTCATTAAA...CCAATATGGCAGCCTGATATCCAGAGGCCAACCCAGGCCAAGGAGAAAAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGGAAAAGGAAGGCATTTaGGAGGTTCCCCTTTGTCTT +
Preference number: 5 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWEKEGI*EVPLCL
Trigger: AAGACAAAGGGGAACCTCCAAAATGCCTTCCTTTTC...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTTGCATAATTCAAAGTaGCATCAGACACTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNLHNSK*HQTLPC
Trigger: ACACGGGAGTGTCTGATGCAACTTTGAATTATGCAA...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGCTGTTTGGCCTTCATaGTCCCTTCAGGGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLAVWPS*SLQGSG
Trigger: CCCACTGCCCTGAAGGGACAATGAAGGCCAAACAGC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645415.1
CDS-3UTR CAA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTTGCTTGGCTGGGGCTaGAATCACCAAGTGCTTTCC +
Preference number: 5 (lower is better)
Translates to: STELILLANTYQRRVEKKLLGWG*NHQVLS
Trigger: GGAAAGCACTTGGTGATTCAAGCCCCAGCCAAGCAA...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CAA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTAATTAAGCCTTGCCAGTaGTGTGCCGCTGCAGCACCA +
Preference number: 5 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVIKPCQ*CAAAAP
Trigger: TGGTGCTGCAGCGGCACACAACTGGCAAGGCTTAAT...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CAA 90 bp AGAGCTCTGCAGAGGATGCATGTTATGAATCCTCAGGTTGTTTGCAAAGAATCAGTCAACACCAAACATTaGTCCATCCTTCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: RALQRMHVMNPQVVCKESVNTKH*SILLGP
Trigger: AGGTCCCAGAAGGATGGACAAATGTTTGGTGTTGAC...TGATTCTTTGCAAACAACCTGAGGATTCATAACATGCATCCTCTGCAGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATTCAAAGTTGCATCAGACACTCCCGTGTAGACTATAAATATGCACAGAAGGGAAGCAGTGGTTTTTCCTaGCAGATGACTCAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: IQSCIRHSRVDYKYAQKGSSGFS*QMTQRL
Trigger: CAGCCTCTGAGTCATCTGCAAGGAAAAACCACTGCT...TCCCTTCTGTGCATATTTATAGTCTACACGGGAGTGTCTGATGCAACTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTGTTCACTGACCACACTAGGGCATaGTTTCCCTGGGGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: TLNGTNQTLTNRNLSLFTDHTRA*FPWGSS
Trigger: ACTGCTTCCCCAGGGAAACAATGCCCTAGTGTGGTC...AGTGAACAAGCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGCATCTGGGGCGACTTaGAACATGACTTCAACCTGG +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLASGAT*NMTSTW
Trigger: CCAGGTTGAAGTCATGTTCAAAGTCGCCCCAGATGC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGTCCCATCTATATCATaGACTCTGATGGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSVPSIS*TLMARG
Trigger: ACCTCTTGCCATCAGAGTCAATGATATAGATGGGAC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ACGCACGCGCCTCTCTCTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACGAATATGAACCTGTTTaGGTTTTTAAGTGTCCCATC +
Preference number: 5 (lower is better)
Translates to: THAPLSVPDFEWNKPDFNEYEPV*VFKCPI
Trigger: GATGGGACACTTAAAAACCAAAACAGGTTCATATTC...GTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAGAGAGAGGCGCGTGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp GGAAGGTCTTCTTTTAGGCTTCTTGGCAGGATTGGGAAAGTCAATCTCATCTGGACTTTGATGGCCAGTTaGATATTAAAAACATGCCCC +
Preference number: 5 (lower is better)
Translates to: GRSSFRLLGRIGKVNLIWTLMAS*ILKTCP
Trigger: GGGGCATGTTTTTAATATCAAACTGGCCATCAAAGT...CCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGAAGACCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCCACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGCGATATATTCCTGCATaGCTTGGCTGGGGCTTGAAT +
Preference number: 5 (lower is better)
Translates to: STELILLANTYQRRVEKKRYIPA*LGWGLN
Trigger: ATTCAAGCCCCAGCCAAGCAATGCAGGAATATATCG...CTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGGTATGTCCCTTGTGCTaGTGTGGCAGGTTTGGTTTC +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLVCPLC*CGRFGF
Trigger: GAAACCAAACCTGCCACACAAGCACAAGGGACATAC...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp ATGAGCAAAATCAGGAGAACAAATGGAAGCTCCGCAGTCGGTGTTCCATTGCTTGCCTTCTTCAATTGCTaGTATCATTTATTCCACAAG +
Preference number: 5 (lower is better)
Translates to: MSKIRRTNGSSAVGVPLLAFFNC*YHLFHK
Trigger: CTTGTGGAATAAATGATACAAGCAATTGAAGAAGGC...AAGCAATGGAACACCGACTGCGGAGCTTCCATTTGTTCTCCTGATTTTGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp AAAATCTGTCTAGGACTTTGTGTTGATCAGTCAGTGTGTTGCCCAGAACATTCCGAGGCCTCACAGCCCTaGAGTAAAATAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: KICLGLCVDQSVCCPEHSEASQP*SKIKVI
Trigger: AATCACTTTTATTTTACTCAAGGGCTGTGAGGCCTC...GGAATGTTCTGGGCAACACACTGACTGATCAACACAAAGTCCTAGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGCCAACTTTGACCTGTTaGTACCTGGCATACAGGTAC +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLPTLTC*YLAYRY
Trigger: GTACCTGTATGCCAGGTACAAACAGGTCAAAGTTGG...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTTACAATTTCCAACTTaGACCTGTTTGTACCTGGCA +
Preference number: 5 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSLQFPT*TCLYLA
Trigger: TGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTAA...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTCAGGTTGTTTGCAAAGAATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGTTGCATAATTCAAAGTaGCATCAGACACTCCCGTGT +
Preference number: 5 (lower is better)
Translates to: LRLFAKNHNCSQVLSSQMLHNSK*HQTLPC
Trigger: ACACGGGAGTGTCTGATGCAACTTTGAATTATGCAA...CATTTGAGAACTCAGTACCTGAGAACAGTTATGATTCTTTGCAAACAACCTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CTGTACCTGACTTTGAATGGAACAAACCAGACTTTAACTAACAGGAACTTGAGCTCCACATTTTTCGATTaGATGGCTTTGGTTATATGG +
Preference number: 5 (lower is better)
Translates to: LYLTLNGTNQTLTNRNLSSTFFD*MALVIW
Trigger: CCATATAACCAAAGCCATCAAATCGAAAAATGTGGA...GCTCAAGTTCCTGTTAGTTAAAGTCTGGTTTGTTCCATTCAAAGTCAGGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp CACAGAACTGATTTTATTAGCCAATACATACCAAAGACGGGTGGAAAAGAAGTATTACAATTTCCAACTTaGACCTGTTTGTACCTGGCA +
Preference number: 5 (lower is better)
Translates to: HRTDFISQYIPKTGGKEVLQFPT*TCLYLA
Trigger: TGCCAGGTACAAACAGGTCAAAGTTGGAAATTGTAA...TACTTCTTTTCCACCCGTCTTTGGTATGTATTGGCTAATAAAATCAGTTCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367595.4
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTTCGATTTGATGGCTTaGGTTATATGGTCAATGTTG +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLFDLMA*VIWSML
Trigger: CAACATTGACCATATAACCAAAGCCATCAAATCGAA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS-3UTR CAA 90 bp TCTTTCATAATGGAAGCCTTATGCTATTACAGACTGCAGTTTTCCAGTCTTTTGTCCACATTTTTCGATTaGATGGCTTTGGTTATATGG +
Preference number: 5 (lower is better)
Translates to: SFIMEALCYYRLQFSSLLSTFFD*MALVIW
Trigger: CCATATAACCAAAGCCATCAAATCGAAAAATGTGGA...CAAAAGACTGGAAAACTGCAGTCTGTAATAGCATAAGGCTTCCATTATGAAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS TCA 72 bp GCGGGGCGGCGTGCGTGCCAGCGGCGTGCGATTCTGTaGGGCCTGCTCTGCGCCGGCGGGGAAGCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: AGRRACQRRAIL*GLLCAGGEARA
Trigger: CGCCCGCGCTTCCCCGCCGGCGCAGAGCAGGCCTCACAGAATCGCACGCCGCTGGCACGCACGCCGCCCCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 72 bp GGCGTGCGTGCCAGCGGCGTGCGATTCTGTGAGGCCTaGTCTGCGCCGGCGGGGAAGCGCGGGCGACGCTAC +
Preference number: 6 (lower is better)
Translates to: GVRASGVRFCEA*SAPAGKRGRRY
Trigger: GTAGCGTCGCCCGCGCTTCCCCGCCGGCGCAGAGCAGGCCTCACAGAATCGCACGCCGCTGGCACGCACGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 72 bp GGCGTGCAGAGCAGGCTCCTCGACCCTCTGCCGCTCTaGCCAGTCGACCCGGTCTCCTCCGGCTTCCCTCCG +
Preference number: 6 (lower is better)
Translates to: GVQSRLLDPLPL*PVDPVSSGFPP
Trigger: CGGAGGGAAGCCGGAGGAGACCGGGTCGACTGGGCAGAGCGGCAGAGGGTCGAGGAGCCTGCTCTGCACGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 72 bp CTCTGCGCCGGCGGGGAAGCGCGGGCGACGCTACGCTaGACGTCCTTCCCTGCCGGAGGAGAGAAAGTGCCG +
Preference number: 6 (lower is better)
Translates to: LCAGGEARATLR*TSFPAGGEKVP
Trigger: CGGCACTTTCTCTCCTCCGGCAGGGAAGGACGTCCAGCGTAGCGTCGCCCGCGCTTCCCCGCCGGCGCAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS GCA 72 bp CAGTCGCGGCGCGCTCCCTCACGTGACCCTGCTCCCTaGCCACTTCTACTCCCTGGGCGTGCAGAGCAGGCT +
Preference number: 6 (lower is better)
Translates to: QSRRAPSRDPAP*PLLLPGRAEQA
Trigger: AGCCTGCTCTGCACGCCCAGGGAGTAGAAGTGGGCAGGGAGCAGGGTCACGTGAGGGAGCGCGCCGCGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS GCA 72 bp GGAAGCGCGGGCGACGCTACGCTGGACGTCCTTCCCTaGCGGAGGAGAGAAAGTGCCGTCAGCTGTAGGGGC +
Preference number: 6 (lower is better)
Translates to: GSAGDATLDVLP*RRRESAVSCRG
Trigger: GCCCCTACAGCTGACGGCACTTTCTCTCCTCCGGCAGGGAAGGACGTCCAGCGTAGCGTCGCCCGCGCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CCA 72 bp GGTGTAAGGCCGGCTTGGAGGCCTGGCCCACCAGTCTaGGTCGCGAGCCTGAGCTCCAGTCGGACCCAAGCT +
Preference number: 6 (lower is better)
Translates to: GVRPAWRPGPPV*VASLSSSRTQA
Trigger: AGCTTGGGTCCGACTGGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS TCA 72 bp CGTCCCCTGAGCTCAGCTCTCCACCGCTGTCGCCGGTaGTGGCCCCCGCGGGCAGGAATGATGAAGCCATGT +
Preference number: 6 (lower is better)
Translates to: RPLSSALHRCRR*WPPRAGMMKPC
Trigger: ACATGGCTTCATCATTCCTGCCCGCGGGGGCCATCACCGGCGACAGCGGTGGAGAGCTGAGCTCAGGGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 72 bp CGGTCTGTCCTCCTTGGATTGGGTGTAAGGCCGGCTTaGAGGCCTGGCCCACCAGTCTGGGTCGCGAGCCTG +
Preference number: 6 (lower is better)
Translates to: RSVLLGLGVRPA*RPGPPVWVASL
Trigger: CAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CAA 72 bp CCGGTCTGTCCTCCTTGGATTGGGTGTAAGGCCGGCTaGGAGGCCTGGCCCACCAGTCTGGGTCGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: PVCPPWIGCKAG*EAWPTSLGREP
Trigger: AGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CAA 90 bp CCTCTGTGTCCGGTCTGTCCTCCTTGGATTGGGTGTAAGGCCGGCTaGGAGGCCTGGCCCACCAGTCTGGGTCGCGAGCCTGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PLCPVCPPWIGCKAG*EAWPTSLGREPELQ
Trigger: CTGGAGCTCAGGCTCGCGACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGGACACAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS TCA 72 bp GTAGCGGTGAGAGCGGAGTCGCGGGAAACGCGAGGCTaGGGACTAAGGTTCCGCCTGCCCCAGATTGTGCGC +
Preference number: 6 (lower is better)
Translates to: VAVRAESRETRG*GLRFRLPQIVR
Trigger: GCGCACAATCTGGGGCAGGCGGAACCTTAGTCCTCAGCCTCGCGTTTCCCGCGACTCCGCTCTCACCGCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642319.1
ENST00000645415.1
CDS CAA 90 bp TCCTTGCTCGCTCCGTCCCTCTGTGTCCGGTCTGTCCTCCTTGGATaGGGTGTAAGGCCGGCTTGGAGGCCTGGCCCACCAGTCTGGGTC +
Preference number: 6 (lower is better)
Translates to: SLLAPSLCVRSVLLG*GVRPAWRPGPPVWV
Trigger: GACCCAGACTGGTGGGCCAGGCCTCCAAGCCGGCCTTACACCCAATCCAAGGAGGACAGACCGGACACAGAGGGACGGAGCGAGCAAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 72 bp GCGCGGCAGCCTTCTCAAACAGCTCGGCCAGGCAACTaGTCTCCTCGATCTCAGGGCTATGGGGGAACTCCA +
Preference number: 6 (lower is better)
Translates to: ARQPSQTARPGN*SPRSQGYGGTP
Trigger: TGGAGTTCCCCCATAGCCCTGAGATCGAGGAGACCAGTTGCCTGGCCGAGCTGTTTGAGAAGGCTGCCGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS CCA 72 bp GGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTaGCCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAG +
Preference number: 6 (lower is better)
Translates to: GLQSHGQKARTL*PVVVQGLPVVQ
Trigger: CTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp CTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACGAGTaGCCACTCCTGCGACAGACTGCACTGCTGTGGGAA +
Preference number: 6 (lower is better)
Translates to: LRPEQGQPPLYE*PLLRQTALLWE
Trigger: TTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGGGGGTTGGCCTTGCTCTGGCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp TCACTAAGCCTGAGGCCAGAGCAAGGCCAACCCCCGCTTTACGAGTaGCCACTCCTGCGACAGACTGCACTGCTGTGGGAAACGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SLSLRPEQGQPPLYE*PLLRQTALLWETLS
Trigger: GGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGGGGGTTGGCCTTGCTCTGGCCTCAGGCTTAGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp GTTTGTACCTGGCATACAGGTACAAGAGCTGCTCCCTaGTGGCCACCTGAATCAGGCCTTGCAGGTGCGCGG +
Preference number: 6 (lower is better)
Translates to: VCTWHTGTRAAP*WPPESGLAGAR
Trigger: CCGCGCACCTGCAAGGCCTGATTCAGGTGGCCAGCAGGGAGCAGCTCTTGTACCTGTATGCCAGGTACAAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367595.4
ENST00000642319.1
ENST00000645415.1
CDS GCA 72 bp AGCAAGGCCAACCCCCGCTTTACGAGTTGCCACTCCTaGGACAGACTGCACTGCTGTGGGAAACGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: SKANPRFTSCHS*DRLHCCGKRCP
Trigger: AGGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGGGGGTTGGCCTTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp CTGGATTGCTGGCTGGACACCTGCCATGCCTTGGGCTaGAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: LDCWLDTCHALG*SPMVRKPELSG
Trigger: GCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GCCTTCATTGTCCCTTCAGGGCAGTGGGCTCCCCTCTaGCCCACGACAAGTCCAGAAGGCTATCCAAGGCTT +
Preference number: 6 (lower is better)
Translates to: AFIVPSGQWAPL*PTTSPEGYPRL
Trigger: AAGCCTTGGATAGCCTTCTGGACTTGTCGTGGGCCAGAGGGGAGCCCACTGCCCTGAAGGGACAATGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS CAA 90 bp TTGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTaGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LGCISLDCWLDTCHA*GCSPMVRKPELSGQ
Trigger: CTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS TCA 72 bp GGGGAAAGCCTGGCACATTTGTATACCTGGAAGGCATaGTCGTTCCCACAGGGAGCGTGTGGCTCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: GESLAHLYTWKA*SFPQGACGSRR
Trigger: TCTGCGGGAGCCACACGCTCCCTGTGGGAACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp CGCTTTACGAGTTGCCACTCCTGCGACAGACTGCACTaGTGTGGGAAACGCTGTCCTGAATGGTGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RFTSCHSCDRLH*CGKRCPEWCCS
Trigger: GCTGCAGCACCATTCAGGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp ACCCCCGCTTTACGAGTTGCCACTCCTGCGACAGACTaGACTGCTGTGGGAAACGCTGTCCTGAATGGTGCT +
Preference number: 6 (lower is better)
Translates to: TPALRVATPATD*TAVGNAVLNGA
Trigger: AGCACCATTCAGGACAGCGTTTCCCACAGCAGTGCAGTCTGTCGCAGGAGTGGCAACTCGTAAAGCGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp CTGCATCTCTCTGGATTGCTGGCTGGACACCTGCCATaGCTTGGGCTGCAGTCCCATGGTCAGAAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: LHLSGLLAGHLP*LGLQSHGQKAR
Trigger: TCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp TTGGGCTGCATCTCTCTGGATTGCTGGCTGGACACCTaGCATGCCTTGGGCTGCAGTCCCATGGTCAGAAAG +
Preference number: 6 (lower is better)
Translates to: LGCISLDCWLDT*HALGCSPMVRK
Trigger: CTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp CCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTaGTGCAGGGACTCCCCGTTGTGCAGGTTTGCAGTA +
Preference number: 6 (lower is better)
Translates to: PMVRKPELSGQW*CRDSPLCRFAV
Trigger: TACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp AGTCCCATGGTCAGAAAGCCAGAACTCTCTGGCCAGTaGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: SPMVRKPELSGQ*WCRDSPLCRFA
Trigger: TGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCATGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp CAGGCACCCCAACAGCCCGCTTGGCGTTCTAGCCCATaGTGGCTGAGCTGGTACCTGACAGTTAATGTCAGC +
Preference number: 6 (lower is better)
Translates to: QAPQQPAWRSSP*WLSWYLTVNVS
Trigger: GCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTGTTGGGGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS GCA 72 bp CCAGTGGTGGTGCAGGGACTCCCCGTTGTGCAGGTTTaGAGTAGCAAATCACTAAGCCTGAGGCCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: PVVVQGLPVVQV*SSKSLSLRPEQ
Trigger: TTGCTCTGGCCTCAGGCTTAGTGATTTGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp ATGGTCAGAAAGCCAGAACTCTCTGGCCAGTGGTGGTaGAGGGACTCCCCGTTGTGCAGGTTTGCAGTAGCA +
Preference number: 6 (lower is better)
Translates to: MVRKPELSGQWW*RDSPLCRFAVA
Trigger: TGCTACTGCAAACCTGCACAACGGGGAGTCCCTGCACCACCACTGGCCAGAGAGTTCTGGCTTTCTGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp ACAGAGGATGGAACAAGTTGCCTGCCAGGACAACGATaGCCTGGGAGGACTCTAGTTCAGCCCAGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: TEDGTSCLPGQR*PGRTLVQPRGQ
Trigger: CTGACCTCTGGGCTGAACTAGAGTCCTCCCAGGGCATCGTTGTCCTGGCAGGCAACTTGTTCCATCCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GCACCCCAACAGCCCGCTTGGCGTTCTAGCCCATTGTaGCTGAGCTGGTACCTGACAGTTAATGTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: APQQPAWRSSPL*LSWYLTVNVSS
Trigger: AGAGCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTGTTGGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS CAA 72 bp ATCTCTCTGGATTGCTGGCTGGACACCTGCCATGCCTaGGGCTGCAGTCCCATGGTCAGAAAGCCAGAACTC +
Preference number: 6 (lower is better)
Translates to: ISLDCWLDTCHA*GCSPMVRKPEL
Trigger: GAGTTCTGGCTTTCTGACCATGGGACTGCAGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp CAAAGGGTTCTAAGTGGTTCTTGGGCTGCATCTCTCTaGATTGCTGGCTGGACACCTGCCATGCCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: QRVLSGSWAASL*IAGWTPAMPWA
Trigger: AGCCCAAGGCATGGCAGGTGTCCAGCCAGCAATCCAGAGAGATGCAGCCCAAGAACCACTTAGAACCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp GCATGGAATCAGGCACCCCAACAGCCCGCTTGGCGTTCTAGCCCATaGTGGCTGAGCTGGTACCTGACAGTTAATGTCAGCTCTATGTTG +
Preference number: 6 (lower is better)
Translates to: AWNQAPQQPAWRSSP*WLSWYLTVNVSSML
Trigger: CAACATAGAGCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTGTTGGGGTGCCTGATTCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS CCA 72 bp CAGCCCGCTTGGCGTTCTAGCCCATTGTGGCTGAGCTaGTACCTGACAGTTAATGTCAGCTCTATGTTGCAG +
Preference number: 6 (lower is better)
Translates to: QPAWRSSPLWLS*YLTVNVSSMLQ
Trigger: CTGCAACATAGAGCTGACATTAACTGTCAGGTACCAGCTCAGCCACAATGGGCTAGAACGCCAAGCGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475338.2
ENST00000645415.1
CDS GCA 72 bp GAAAAGGAAGTTTGTGGGACAGAGGATGGAACAAGTTaGCTGCCAGGACAACGATGCCCTGGGAGGACTCTA +
Preference number: 6 (lower is better)
Translates to: EKEVCGTEDGTS*LPGQRCPGRTL
Trigger: TAGAGTCCTCCCAGGGCATCGTTGTCCTGGCAGGCAACTTGTTCCATCCTCTGTCCCACAAACTTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp GGTGGAAATAGAAAAGGAAGTTTGTGGGACAGAGGATGGAACAAGTaGCCTGCCAGGACAACGATGCCCTGGGAGGACTCTAGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: GGNRKGSLWDRGWNK*PARTTMPWEDSSSA
Trigger: GGCTGAACTAGAGTCCTCCCAGGGCATCGTTGTCCTGGCAGGCAACTTGTTCCATCCTCTGTCCCACAAACTTCCTTTTCTATTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS GCA 72 bp TCTCAGGTACTGAGTTCTCAAATGTGGAAGGTCTTCTaGGGAGGGGGAAAGGGAAGAGTACTCAACTGGCGA +
Preference number: 6 (lower is better)
Translates to: SQVLSSQMWKVF*GGGKGRVLNWR
Trigger: TCGCCAGTTGAGTACTCTTCCCTTTCCCCCTCCGCAGAAGACCTTCCACATTTGAGAACTCAGTACCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GGTGGAAATAGAAAAGGAAGTTTGTGGGACAGAGGATaGAACAAGTTGCCTGCCAGGACAACGATGCCCTGG +
Preference number: 6 (lower is better)
Translates to: GGNRKGSLWDRG*NKLPARTTMPW
Trigger: CCAGGGCATCGTTGTCCTGGCAGGCAACTTGTTCCATCCTCTGTCCCACAAACTTCCTTTTCTATTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp CACTGCGTTGTGGGGATCAATGAACACAACCAACTGTGGATGTGCTaGGGGAAAGCCTGGCACATTTGTATACCTGGAAGGCATGATCGT +
Preference number: 6 (lower is better)
Translates to: HCVVGINEHNQLWMC*GKAWHICIPGRHDR
Trigger: ACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTCATTGATCCCCACAACGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GAACACAACCAACTGTGGATGTGCTTGGGGAAAGCCTaGCACATTTGTATACCTGGAAGGCATGATCGTTCC +
Preference number: 6 (lower is better)
Translates to: EHNQLWMCLGKA*HICIPGRHDRS
Trigger: GGAACGATCATGCCTTCCAGGTATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp CACGAGCCACAAGGGACCAACGAGCTCACCAAACATTaGTCCATCCTTCTGGGACCTGGGAATTTAGTCTTT +
Preference number: 6 (lower is better)
Translates to: HEPQGTNELTKH*SILLGPGNLVF
Trigger: AAAGACTAAATTCCCAGGTCCCAGAAGGATGGACAAATGTTTGGTGAGCTCGTTGGTCCCTTGTGGCTCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622400.1
CDS CAA 90 bp GCCTTGGGGACAGCTCATGGGACTAATACTCACCTTTTAGGCTTCTaGGCAGGATTGGGAAAGTCAATCTCATCTGGGCTGTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: ALGTAHGTNTHLLGF*AGLGKSISSGLLKS
Trigger: TGACTTCAACAGCCCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGGTGAGTATTAGTCCCATGAGCTGTCCCCAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp CACTGCGTTGTGGGGATCAATGAACACAACCAACTGTaGATGTGCTTGGGGAAAGCCTGGCACATTTGTATA +
Preference number: 6 (lower is better)
Translates to: HCVVGINEHNQL*MCLGKAWHICI
Trigger: TATACAAATGTGCCAGGCTTTCCCCAAGCACATCCACAGTTGGTTGTGTTCATTGATCCCCACAACGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GGAAAGGGAAGAGTACTCAACTGGCGATCAGAGACCTaGTTTCCAGTGCAGCTCTGTCAAATCGATTCACTT +
Preference number: 6 (lower is better)
Translates to: GKGRVLNWRSET*FPVQLCQIDSL
Trigger: AAGTGAATCGATTTGACAGAGCTGCACTGGAAACCAGGTCTCTGATCGCCAGTTGAGTACTCTTCCCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp GTATTAGTACACGAGCCACAAGGGACCAACGAGCTCACCAAACATTaGTCCATCCTTCTGGGACCTGGGAATTTAGTCTTTGCAGGTGTT +
Preference number: 6 (lower is better)
Translates to: VLVHEPQGTNELTKH*SILLGPGNLVFAGV
Trigger: AACACCTGCAAAGACTAAATTCCCAGGTCCCAGAAGGATGGACAAATGTTTGGTGAGCTCGTTGGTCCCTTGTGGCTCGTGTACTAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622400.1
CDS CCA 72 bp GGAAGCTCTCCATGTGCAAACTGGAATTTAGCCAGCTaGAATTTATTCCTGTCCCTCTGGGAAGCTGTGTTT +
Preference number: 6 (lower is better)
Translates to: GSSPCANWNLAS*NLFLSLWEAVF
Trigger: AAACACAGCTTCCCAGAGGGACAGGAATAAATTCCAGCTGGCTAAATTCCAGTTTGCACATGGAGAGCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp GAGGAATACCATATCTTTGCCCATCTCACTGCGTTGTaGGGATCAATGAACACAACCAACTGTGGATGTGCT +
Preference number: 6 (lower is better)
Translates to: EEYHIFAHLTAL*GSMNTTNCGCA
Trigger: AGCACATCCACAGTTGGTTGTGTTCATTGATCCCCACAACGCAGTGAGATGGGCAAAGATATGGTATTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp ACAGCTCATGGGACTAATACTCACCTTTTAGGCTTCTaGGCAGGATTGGGAAAGTCAATCTCATCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: TAHGTNTHLLGF*AGLGKSISSGL
Trigger: CAGCCCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGGTGAGTATTAGTCCCATGAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 90 bp ACAGCTCATGGGACTAATACTCACCTTTTAGGCTTCTTGGCAGGATaGGGAAAGTCAATCTCATCTGGGCTGTTGAAGTCAACACCAAAC +
Preference number: 6 (lower is better)
Translates to: TAHGTNTHLLGFLAG*GKSISSGLLKSTPN
Trigger: GTTTGGTGTTGACTTCAACAGCCCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGGTGAGTATTAGTCCCATGAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp AATCATAACTGTTCTCAGGTACTGAGTTCTCAAATGTaGAAGGTCTTCTGCGGAGGGGGAAAGGGAAGAGTA +
Preference number: 6 (lower is better)
Translates to: NHNCSQVLSSQM*KVFCGGGKGRV
Trigger: TACTCTTCCCTTTCCCCCTCCGCAGAAGACCTTCCACATTTGAGAACTCAGTACCTGAGAACAGTTATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp GGGACTAATACTCACCTTTTAGGCTTCTTGGCAGGATaGGGAAAGTCAATCTCATCTGGGCTGTTGAAGTCA +
Preference number: 6 (lower is better)
Translates to: GTNTHLLGFLAG*GKSISSGLLKS
Trigger: TGACTTCAACAGCCCAGATGAGATTGACTTTCCCAATCCTGCCAAGAAGCCTAAAAGGTGAGTATTAGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CAA 72 bp TTTCCAGTGCAGCTCTGTCAAATCGATTCACTTCTCTaGAGCCCCAGTATTCCCAAGAGGAATACCATATCT +
Preference number: 6 (lower is better)
Translates to: FPVQLCQIDSLL*SPSIPKRNTIS
Trigger: AGATATGGTATTCCTCTTGGGAATACTGGGGCTCAAGAGAAGTGAATCGATTTGACAGAGCTGCACTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440959.2
CDS CCA 72 bp AATGACAATCAATCAGTGAACATTTGTAGACACATTTaGATTCCAAACCTGCAGTCTGTTCAGCCATATCGG +
Preference number: 6 (lower is better)
Translates to: NDNQSVNICRHI*IPNLQSVQPYR
Trigger: CCGATATGGCTGAACAGACTGCAGGTTTGGAATCCAAATGTGTCTACAAATGTTCACTGATTGATTGTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440959.2