RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114331

Ensembl transcript IDs: ENST00000326793.11, ENST00000423531.3, ENST00000439758.3, ENST00000447662.1, ENST00000450200.1, ENST00000466876.2, ENST00000471593.1, ENST00000472860.1, ENST00000475905.5, ENST00000480906.5, ENST00000481463.5, ENST00000484296.1, ENST00000490224.1, ENST00000618471.4, ENST00000635383.1

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATTCATGTTGAAACTTGATCTCCATTGTCACAGTATGAAGAGGTaGGGCCTTTGGGGAAGTGATGAAGACATGAGGGCTCCGCCTTCA +
Preference number: 1 (lower is better)
Translates to: KFMLKLDLHCHSMKR*GLWGSDEDMRAPPS
Trigger: TGAAGGCGGAGCCCTCATGTCTTCATCACTTCCCCAAAGGCCCCACCTCTTCATACTGTGACAATGGAGATCAAGTTTCAACATGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR TCA 90 bp GAACCACCAAAAAGCCTCAGGGAAGCTAAAGAAAACACATATTCTTaGGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGACATGCTT +
Preference number: 1 (lower is better)
Translates to: EPPKSLREAKENTYS*GRQDSWLPLDEDML
Trigger: AAGCATGTCTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTTTAGCTTCCCTGAGGCTTTTTGGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR TCA 90 bp AACTTGGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTaGGCCAGGTCTCGAATCCCATTCATGAACTGTTTATTTGCAACA +
Preference number: 1 (lower is better)
Translates to: NLVKLVSTTASLLEY*ARSRIPFMNCLFAT
Trigger: TGTTGCAAATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR TCA 90 bp CTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATaGACAAACGGGGAAAACACATTCTCTAGTTCTAATAAATCATAT +
Preference number: 1 (lower is better)
Translates to: LDNNLSPKKYNRPHL*TNGENTFSSSNKSY
Trigger: ATATGATTTATTAGAACTAGAGAATGTGTTTTCCCCGTTTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR CCA 90 bp TATGGTCTACCTGTACAGCCATTATACATACATACATTAAAGTACTaGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTAT +
Preference number: 1 (lower is better)
Translates to: YGLPVQPLYIHTLKY*TITCHLRSITDRIY
Trigger: ATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTACTTTAATGTATGTATGTATAATGGCTGTACAGGTAGACCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR-3UTR CCA 90 bp CTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATCACAGTATGAAGAGGTaGGGCCTTTGGGGAAGTGAT +
Preference number: 2 (lower is better)
Translates to: LNDSIITRILSQVSNPIHHSMKR*GLWGSD
Trigger: ATCACTTCCCCAAAGGCCCCACCTCTTCATACTGTG...ATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR-3UTR TCA 90 bp ATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATGAACTGTTTATTTCCATTGTCACAGTATaGAGAGGTGGGGCCTTTGGG +
Preference number: 2 (lower is better)
Translates to: IITRILSQVSNPIHELFISIVTV*RGGAFG
Trigger: CCCAAAGGCCCCACCTCTTCATACTGTGACAATGGA...AATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR-3UTR TCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGGCCTAAATCTAGACTaGACTTCTGTCTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKGLNLD*TSVYRN
Trigger: ATTTCTGTAGACAGAAGTTCAGTCTAGATTTAGGCC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR-3UTR TCA 90 bp AAACTTGGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGTGCCCTGCTATGGTTTaGATGTTTGTGTCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: KLGQTCLNDSIITRILSQCPAMV*MFVSLQ
Trigger: TTGGAGAGACACAAACATTCAAACCATAGCAGGGCA...CTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR-3UTR TCA 90 bp TTTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAAGTCAGCAGCCAGAGTaGAATAGAGCAAGTCAATGT +
Preference number: 2 (lower is better)
Translates to: FTIPFISLECIWKTSVQQSQQPE*NRASQC
Trigger: ACATTGACTTGCTCTATTTCACTCTGGCTGCTGACT...TTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
3UTR-3UTR TCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGGCCTAAATCTAGACTaGACTTCTGTCTACAGAAAT +
Preference number: 2 (lower is better)
Translates to: YWTITCHLRSITDRIYEQGLNLD*TSVYRN
Trigger: ATTTCTGTAGACAGAAGTTCAGTCTAGATTTAGGCC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAATGCCACCACCCATTaGCAAAAGAATCACTTTTGT +
Preference number: 2 (lower is better)
Translates to: YWTITCHLRSITDRIYEQNATTH*QKNHFC
Trigger: ACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR-3UTR TCA 90 bp ATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATGAACTGTTTATTCTCCAAAATTCATGTTaGAACTTGATCTCCATTGTC +
Preference number: 2 (lower is better)
Translates to: IITRILSQVSNPIHELFILQNSC*NLISIV
Trigger: GACAATGGAGATCAAGTTTCAACATGAATTTTGGAG...AATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR-3UTR CCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCTACATGCATGCAGTTTaGCCAAATTATGGAACCTTT +
Preference number: 2 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIYMHAV*PNYGTF
Trigger: AAAGGTTCCATAATTTGGCCAAACTGCATGCATGTA...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
3UTR-3UTR CAA 90 bp GGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGCTAATGGTCCCTTTTTaGCCCTTCCACCTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: GQTCLNDSIITRILSQVSLMVPF*PFHLLP
Trigger: TGGCAGAAGGTGGAAGGGCAAAAAAGGGACCATTAG...CGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR-3UTR CAA 90 bp CTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATCAACAAGGTGCCATCTaGAAAGCAGAGATAGCTGGC +
Preference number: 3 (lower is better)
Translates to: LNDSIITRILSQVSNPIHQQGAI*KAEIAG
Trigger: GCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTG...ATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR CCA 72 bp TTGAAACTTGATCTCCATTGTCACAGTATGAAGAGGTaGGGCCTTTGGGGAAGTGATGAAGACATGAGGGCT +
Preference number: 3 (lower is better)
Translates to: LKLDLHCHSMKR*GLWGSDEDMRA
Trigger: AGCCCTCATGTCTTCATCACTTCCCCAAAGGCCCCACCTCTTCATACTGTGACAATGGAGATCAAGTTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR TCA 72 bp ATTTCAAATCATTTCATGATACAAATAAAGTGCCTCTaGCTGGTGGTCAGTCAGACCTGGGTAATGGTGCCA +
Preference number: 3 (lower is better)
Translates to: ISNHFMIQIKCL*LVVSQTWVMVP
Trigger: TGGCACCATTACCCAGGTCTGACTGACCACCAGTCAGAGGCACTTTATTTGTATCATGAAATGATTTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326793.11
3UTR-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCAATGCCACCACCCATaGGCAAAAGAATCACTTTTG +
Preference number: 3 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIQCHHP*AKESLL
Trigger: CAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATTG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326793.11
3UTR TCA 72 bp AAACTTGTCTCAACGACAGCATCATTACTAGAATACTaGGCCAGGTCTCGAATCCCATTCATGAACTGTTTA +
Preference number: 3 (lower is better)
Translates to: KLVSTTASLLEY*ARSRIPFMNCL
Trigger: TAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
3UTR TCA 72 bp AACCTGTCACCTAAGAAGTATAACCGACCGCATTTATaGACAAACGGGGAAAACACATTCTCTAGTTCTAAT +
Preference number: 3 (lower is better)
Translates to: NLSPKKYNRPHL*TNGENTFSSSN
Trigger: ATTAGAACTAGAGAATGTGTTTTCCCCGTTTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGCAAAAGAATCACTTTaGTCTAACCTCCTATCATCT +
Preference number: 3 (lower is better)
Translates to: YWTITCHLRSITDRIYEQAKESL*SNLLSS
Trigger: AGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR CCA 72 bp CATACTTTTATTCCATCGATACATCTGTCAAGGTTTTaGGGAATCAACCCAACAATGAAGAACTACACATTT +
Preference number: 3 (lower is better)
Translates to: HTFIPSIHLSRF*GINPTMKNYTF
Trigger: AAATGTGTAGTTCTTCATTGTTGGGTTGATTCCCCAAAACCTTGACAGATGTATCGATGGAATAAAAGTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAGCGTTGCGCGGAGCTaGGAAGGGCGCCTCGCCCGC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQSVARS*EGRLAR
Trigger: GCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGATGCTGGCCCACCGTaGATCTGCCAGGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKDAGPP*ICQATV
Trigger: GACTGTGGCCTGGCAGATCCACGGTGGGCCAGCATC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GAGGACACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTGGCCCTCACCACACAGTATGAAGAGGTaGGGCCTTTGGGGAAGTGAT +
Preference number: 4 (lower is better)
Translates to: EDTSTRCHLESRDSWPSPHSMKR*GLWGSD
Trigger: ATCACTTCCCCAAAGGCCCCACCTCTTCATACTGTG...TGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACTTCCAAAGCTGCCCTaGAGCGGGGCGAGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVLPKLP*SGASPS
Trigger: TGAAGGACTCGCCCCGCTTCAGGGCAGCTTTGGAAG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAGGAGGAGGCTGCAGTaGGCTGAGATCGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVRRRLQ*AEIVPL
Trigger: CAGTGGCACGATCTCAGCTCACTGCAGCCTCCTCCT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR GCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGGCCCACCGTGGATCTaGCAGGCCACAGTCACAACA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVGPPWI*QATVTT
Trigger: TGTTGTGACTGTGGCCTGGCAGATCCACGGTGGGCC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCATACCTGCCCTGTGTaGCCTAAGACGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKHTCPV*PKTVAW
Trigger: CCATGCCACCGTCTTAGGGCACACAGGGCAGGTATG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACCTAAGACGGTGGCATaGTGCAATGGTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVPKTVA*CNGPRP
Trigger: AGGGCGGGGACCATTGCACCATGCCACCGTCTTAGG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTGTGCCCTAAGACGGTaGCATGGTGCAATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKCALRR*HGAMVP
Trigger: GGGGACCATTGCACCATGCCACCGTCTTAGGGCACA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR CAA 72 bp CTTCTGCCATTGAGGACACATCAACAAGGTGCCATCTaGAAAGCAGAGATAGCTGGCCCTCACCAGACACTA +
Preference number: 4 (lower is better)
Translates to: LLPLRTHQQGAI*KAEIAGPHQTL
Trigger: TAGTGTCTGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTCAATGGCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp GGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGTCCATTGTCACAGTATaGAGAGGTGGGGCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GQTCLNDSIITRILSQVSSIVTV*RGGAFG
Trigger: CCCAAAGGCCCCACCTCTTCATACTGTGACAATGGA...CGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCACAACAGCTGGCATTaGCAGGGATACACTGGACCC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKHNSWH*QGYTGP
Trigger: GGGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGGCCCACCGTGGATCTaGCAGGCCACAGTCACAACA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLGPPWI*QATVTT
Trigger: TGTTGTGACTGTGGCCTGGCAGATCCACGGTGGGCC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTAAGACGGTGGCATGGTaGAATGGTCCCCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLKTVAW*NGPRPW
Trigger: CCAAGGGCGGGGACCATTGCACCATGCCACCGTCTT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATCATACCTGCCCTGTGTaGCCTAAGACGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDHTCPV*PKTVAW
Trigger: CCATGCCACCGTCTTAGGGCACACAGGGCAGGTATG...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACCAAGAGGAGGAGGCTaGAGTGAGCTGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVPRGGG*SELRSC
Trigger: GCACGATCTCAGCTCACTGCAGCCTCCTCCTCTTGG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGATGCTGGCCCACCGTaGATCTGCCAGGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQDAGPP*ICQATV
Trigger: GACTGTGGCCTGGCAGATCCACGGTGGGCCAGCATC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGGTGGCATGGTGCAATaGTCCCCGCCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLGGMVQ*SPPLDI
Trigger: GATGTCCAAGGGCGGGGACCATTGCACCATGCCACC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCCTAAGACGGTGGCATaGTGCAATGGTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLPKTVA*CNGPRP
Trigger: AGGGCGGGGACCATTGCACCATGCCACCGTCTTAGG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATTGTGCCCTAAGACGGTaGCATGGTGCAATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDCALRR*HGAMVP
Trigger: GGGGACCATTGCACCATGCCACCGTCTTAGGGCACA...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCACCCCAAGGCTCCGGTaGATTCCGGAGCACTCGATA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTTPRLR*IPEHSI
Trigger: TATCGAGTGCTCCGGAATTCACCGGAGCCTTGGGGT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTTTGGGCAGATGCTCTaGCTTGGTCCCCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTFGQML*LGPLAQ
Trigger: TTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATACTTCTTCCAAAGCTaGCCTGAAGCGGGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVYFFQS*PEAGRV
Trigger: GACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGGCCCAGTTCACGTCTaGACCATGAGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLGPVHV*TMSQSL
Trigger: GAGGCTTTGGCTCATGGTGCAGACGTGAACTGGGCC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp GAGGACACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTGGCCCTCACCAGACACATCAACAAGGTaGCATCTTGAAAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: EDTSTRCHLESRDSWPSPDTSTR*HLESRD
Trigger: ATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTC...TGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGGTGGCATGGTGCAATaGTCCCCGCCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQGGMVQ*SPPLDI
Trigger: GATGTCCAAGGGCGGGGACCATTGCACCATGCCACC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTGTGCCCTAAGACGGTaGCATGGTGCAATGGTCCCC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLCALRR*HGAMVP
Trigger: GGGGACCATTGCACCATGCCACCGTCTTAGGGCACA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAATTAGCTCGGAATGGTaGCGGGTGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVISSEW*RVPVVP
Trigger: TGGGACTACAGGCACCCGCCACCATTCCGAGCTAAT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp GAGGACACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTGGCCCTCACCAAAAGCTGCCCTGCTATaGTTTGAATGTTTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: EDTSTRCHLESRDSWPSPKAALL*FECLCL
Trigger: GAGACACAAACATTCAAACCATAGCAGGGCAGCTTT...TGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAATACACTGGACCCGCTaGAGCGCACTTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVIHWTR*SALSPF
Trigger: GAAAGGAGAAAGTGCGCTTCAGCGGGTCCAGTGTAT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp GAGCAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGCCCCCTAATACAGCCTaGATAAGTGGTGTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: EQVNVYCHRKSYECLKARPPNTA*ISGVAL
Trigger: CAAAGCGACACCACTTATTCAGGCTGTATTAGGGGG...CCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTACTTCTTCCAAAGCTaGCCTGAAGCGGGGCGAGTC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLYFFQS*PEAGRV
Trigger: GACTCGCCCCGCTTCAGGGCAGCTTTGGAAGAAGTA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCACAACAGCTGGCATTaGCAGGGATACACTGGACCC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLHNSWH*QGYTGP
Trigger: GGGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGGCCCAGTTCACGTCTaGACCATGAGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQGPVHV*TMSQSL
Trigger: GAGGCTTTGGCTCATGGTGCAGACGTGAACTGGGCC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TTTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAAAGACGGTGGCATGGTaGAATGGTCCCCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: FTIPFISLECIWKTSVQQKTVAW*NGPRPW
Trigger: CCAAGGGCGGGGACCATTGCACCATGCCACCGTCTT...TTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACATACCTGCCCTGTGTaGCCTAAGACGGTGGCATGG +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQHTCPV*PKTVAW
Trigger: CCATGCCACCGTCTTAGGGCACACAGGGCAGGTATG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGCCTTAATCCATGCCTaGCGCAGCTTTTCGGAATCT +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKALIHA*RSFSES
Trigger: AGATTCCGAAAAGCTGCGCCAGGCATGGATTAAGGC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TTTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAGGTGGCATGGTGCAATaGTCCCCGCCCTTGGACATC +
Preference number: 4 (lower is better)
Translates to: FTIPFISLECIWKTSVQQGGMVQ*SPPLDI
Trigger: GATGTCCAAGGGCGGGGACCATTGCACCATGCCACC...TTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp TTTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAACCTAAGACGGTGGCATaGTGCAATGGTCCCCGCCCT +
Preference number: 4 (lower is better)
Translates to: FTIPFISLECIWKTSVQQPKTVA*CNGPRP
Trigger: AGGGCGGGGACCATTGCACCATGCCACCGTCTTAGG...TTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
3UTR CAA 72 bp AAAGAGGCTGAAGAAAGGGTCCTAATGGTCCCTTTTTaGCCCTTCCACCTTCTGCCATTGAGGACACATCAA +
Preference number: 4 (lower is better)
Translates to: KEAEERVLMVPF*PFHLLPLRTHQ
Trigger: TTGATGTGTCCTCAATGGCAGAAGGTGGAAGGGCAAAAAAGGGACCATTAGGACCCTTTCTTCAGCCTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGTAGCAATACTGGTCTaGACAGCCTTAATCCATGCC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKVAILV*TALIHA
Trigger: GGCATGGATTAAGGCTGTTCAGACCAGTATTGCTAC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTATACACTGGACCCGCTaGAGCGCACTTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLIHWTR*SALSPF
Trigger: GAAAGGAGAAAGTGCGCTTCAGCGGGTCCAGTGTAT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCTTTGGGCAGATGCTCTaGCTTGGTCCCCTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIFGQML*LGPLAQ
Trigger: TTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAA...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTTCACGTCTGCACCATaGGCCAAAGCCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTFTSAP*AKASAI
Trigger: AATGGCTGAGGCTTTGGCTCATGGTGCAGACGTGAA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTTCACGTCTGCACCATaGGCCAAAGCCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLFTSAP*AKASAI
Trigger: AATGGCTGAGGCTTTGGCTCATGGTGCAGACGTGAA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACGCTTTGTTTTCCTCTaGATTGGCCCAGTTCACGTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVRFVFL*IGPVHV
Trigger: GACGTGAACTGGGCCAATTCAGAGGAAAACAAAGCG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATCGCTTTGTTTTCCTCTaGATTGGCCCAGTTCACGTC +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDRFVFL*IGPVHV
Trigger: GACGTGAACTGGGCCAATTCAGAGGAAAACAAAGCG...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCAGCAGGCTGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYISRLIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCAGCCTGCT...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp GGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGTGCCCTGCTATGGTTTaGATGTTTGTGTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GQTCLNDSIITRILSQVSCPAMV*MFVSLQ
Trigger: TTGGAGAGACACAAACATTCAAACCATAGCAGGGCA...CGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAAGGCCCAGTTCACGTCTaGACCATGAGCCAAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKGPVHV*TMSQSL
Trigger: GAGGCTTTGGCTCATGGTGCAGACGTGAACTGGGCC...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGCCTTAATCCATGCCTaGCGCAGCTTTTCGGAATCT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVALIHA*RSFSES
Trigger: AGATTCCGAAAAGCTGCGCCAGGCATGGATTAAGGC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACACAGTCACAACAGCTaGCATTGCCAGGGATACACT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVHSHNS*HCQGYT
Trigger: AGTGTATCCCTGGCAATGCCAGCTGTTGTGACTGTG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATAATGGTCCCCGCCCTTaGACATCTCTTTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDNGPRP*TSLWLT
Trigger: TGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATT...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTCCCTTCTTCATCAGTaGCATGTTGATTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKSLLHQ*HVDWHL
Trigger: GAGGTGCCAATCAACATGCCACTGATGAAGAAGGGA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTCCTGTGGATGGAGATaGTTTCTTATCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKSCGWR*FLIQLL
Trigger: GAGAAGCTGGATAAGAAATCATCTCCATCCACAGGA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAATAAAGAAGTCAGCTTCACGTCTGCACCATaGGCCAAAGCCTCAGCCATT +
Preference number: 4 (lower is better)
Translates to: HFTGMYMEDIRTANKEVSFTSAP*AKASAI
Trigger: AATGGCTGAGGCTTTGGCTCATGGTGCAGACGTGAA...GCTGACTTCTTTATTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCCCCCTAATACAGCCTaGATAAGTGGTGTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTPPNTA*ISGVAL
Trigger: CAAAGCGACACCACTTATTCAGGCTGTATTAGGGGG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCACATGCTTGACTGAGTaGTCCTGGGCAAGATGCATG +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTTCLTE*SWARCM
Trigger: CATGCATCTTGCCCAGGATCACTCAGTCAAGCATGT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGAAGACATGCTTGACTaGGTGATCCTGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLEDMLD*VILGKM
Trigger: CATCTTGCCCAGGATCACTCAGTCAAGCATGTCTTC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCGAAGACATGCTTGACTaGGTGATCCTGGGCAAGATG +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTEDMLD*VILGKM
Trigger: CATCTTGCCCAGGATCACTCAGTCAAGCATGTCTTC...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGACACACACCTATTTCTaGACCACCAAAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKTHTYF*TTKKPQ
Trigger: CTGAGGCTTTTTGGTGGTTCAGAAATAGGTGTGTGT...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AAACTTGGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGTCCACCTTCTGCCATTaGGGACACATCAACAAGGTG +
Preference number: 4 (lower is better)
Translates to: KLGQTCLNDSIITRILSQSTFCH*GHINKV
Trigger: CACCTTGTTGATGTGTCCTCAATGGCAGAAGGTGGA...CTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp GAGGACACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTGGCCCTCACCACATGAACTGTTTATTTaGAACACAAAAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: EDTSTRCHLESRDSWPSPHELFI*NTKGFS
Trigger: GGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG...TGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTCTTTTCTCCTTTGCTaGATCCACAACCAGTCGATC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKSFLLC*IHNQSI
Trigger: GATCGACTGGTTGTGGATGCAGCAAAGGAGAAAAGA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTAACAGCCTTAATCCATaGCTGGCGCAGCTTTTCGGA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLNSLNP*LAQLFG
Trigger: TCCGAAAAGCTGCGCCAGGCATGGATTAAGGCTGTT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATCTGCTTCCACAGCTATaGTCAAAGGGTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDLLPQL*SKGLSL
Trigger: AAGGGAAAGACCCTTTGAGCATAGCTGTGGAAGCAG...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp GGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGCACCAGACACTAATCTaGTGGCATCTTTATCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQTCLNDSIITRILSQVSHQTLI*WHLYLG
Trigger: TCCAAGATAAAGATGCCAGCAGATTAGTGTCTGGTG...CGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCACAGTCACAACAGCTaGCATTGCCAGGGATACACT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLHSHNS*HCQGYT
Trigger: AGTGTATCCCTGGCAATGCCAGCTGTTGTGACTGTG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLADALT*SPGPNL
Trigger: TAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTATTGGCTGACACCGTaGAGGGTAAAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKYWLTP*RVKILF
Trigger: GAAGAGAATCTTTACCCTCCACGGTGTCAGCCAATA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGCTCATATAAACTATTaGCTGACACCGTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKAHINY*LTPWRV
Trigger: TACCCTCCACGGTGTCAGCCAATAGTTTATATGAGC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAATGGTCCCCGCCCTTaGACATCTCTTTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTNGPRP*TSLWLT
Trigger: TGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATTCCCTTCTTCATCAGTaGCATGTTGATTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDSLLHQ*HVDWHL
Trigger: GAGGTGCCAATCAACATGCCACTGATGAAGAAGGGA...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp CTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATCTGGCATCTTTATCTTaGACTTCCCAGCTCCAGAAT +
Preference number: 4 (lower is better)
Translates to: LNDSIITRILSQVSNPIHLASLS*TSQLQN
Trigger: ATTCTGGAGCTGGGAAGTCCAAGATAAAGATGCCAG...ATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACGCTTTGTTTTCCTCTaGATTGGCCCAGTTCACGTC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQRFVFL*IGPVHV
Trigger: GACGTGAACTGGGCCAATTCAGAGGAAAACAAAGCG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAACCGACCGCATTTATaGACAAACGGGGAAAACACA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVNRPHL*TNGENT
Trigger: TGTGTTTTCCCCGTTTGTTCATAAATGCGGTCGGTT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACAGCTTTTCGGAATCTaGCTGGAGCATGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVQLFGI*LEHATF
Trigger: AAAAGTTGCATGCTCCAGGCAGATTCCGAAAAGCTG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCTGCTTCCACAGCTATaGTCAAAGGGTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTLLPQL*SKGLSL
Trigger: AAGGGAAAGACCCTTTGAGCATAGCTGTGGAAGCAG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGGACTGTCAGAAAACTTaGTCAAACTTGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: GQTCLNDSIITRILSQVSDCQKT*SNLSQR
Trigger: TCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTC...CGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACATGCAACTTTTTGTTaGCGAGACCACCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVHATFC*RDHLKA
Trigger: TGCTTTGAGGTGGTCTCGCCAACAAAAAGTTGCATG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCTTCTGACTGAACTTTaGGCAGATGCTCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLLLTEL*ADALTW
Trigger: CCAAGTCAGAGCATCTGCCCAAAGTTCAGTCAGAAG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATATTGGCTGACACCGTaGAGGGTAAAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVYWLTP*RVKILF
Trigger: GAAGAGAATCTTTACCCTCCACGGTGTCAGCCAATA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATGCTCATATAAACTATTaGCTGACACCGTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDAHINY*LTPWRV
Trigger: TACCCTCCACGGTGTCAGCCAATAGTTTATATGAGC...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp GAGCAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGTACAGCCTGAATAAGTaGTGTCGCTTTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: EQVNVYCHRKSYECLKARYSLNK*CRFVFL
Trigger: GAGGAAAACAAAGCGACACCACTTATTCAGGCTGTA...CCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAATGGTCCCCGCCCTTaGACATCTCTTTGGTTGACA +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQNGPRP*TSLWLT
Trigger: TGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTCCCTTCTTCATCAGTaGCATGTTGATTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTSLLHQ*HVDWHL
Trigger: GAGGTGCCAATCAACATGCCACTGATGAAGAAGGGA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAACTTGGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGTTCCCAGCTCCAGAATaGATGTCACGCACTGTACTA +
Preference number: 4 (lower is better)
Translates to: KLGQTCLNDSIITRILSQFPAPE*MSRTVL
Trigger: TAGTACAGTGCGTGACATCCATTCTGGAGCTGGGAA...CTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVSSELC*IPLSLL
Trigger: AAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCCCCCTAATACAGCCTaGATAAGTGGTGTCGCTTTG +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIPPNTA*ISGVAL
Trigger: CAAAGCGACACCACTTATTCAGGCTGTATTAGGGGG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATCTAAACGTAACAAGGTaGCTATATCAGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDLNVTR*LYQHWL
Trigger: CAGCCAATGCTGATATAGTCACCTTGTTACGTTTAG...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATCCATAAAGTCCTTCTaGTTCCCGCATCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVSIKSF*FPHLFI
Trigger: AATGAAGAGATGCGGGAATCAGAAGGACTTTATGGA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAACCGACCGCATTTATaGACAAACGGGGAAAACACA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTNRPHL*TNGENT
Trigger: TGTGTTTTCCCCGTTTGTTCATAAATGCGGTCGGTT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTATTCCAGAGGTGATCTaGATGAAACACGCACCAATG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLIPEVI*MKHAPM
Trigger: CATTGGTGCGTGTTTCATTCAGATCACCTCTGGAAT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR GCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGAAACATTTTCTTGTTaGTGTCAGAATGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKETFSC*CQNVGG
Trigger: GCCACCAACATTCTGACAGCAACAAGAAAATGTTTC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCAGCTTTTCGGAATCTaGCTGGAGCATGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTQLFGI*LEHATF
Trigger: AAAAGTTGCATGCTCCAGGCAGATTCCGAAAAGCTG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTGCTTCCACAGCTATaGTCAAAGGGTCTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLLPQL*SKGLSL
Trigger: AAGGGAAAGACCCTTTGAGCATAGCTGTGGAAGCAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATATATCAGCATTGGCTaGTTCCACAGCTATGCTCAA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVYISIG*FHSYAQ
Trigger: TTGAGCATAGCTGTGGAAGCAGCCAATGCTGATATA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGACTGTCAGAAAACTTaGTCAAACTTGTCTCAACGA +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKDCQKT*SNLSQR
Trigger: TCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCATGCAACTTTTTGTTaGCGAGACCACCTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLHATFC*RDHLKA
Trigger: TGCTTTGAGGTGGTCTCGCCAACAAAAAGTTGCATG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTCTGACTTGGTCCCCTaGCCCAAATTTAGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLSDLVP*PKFRNA
Trigger: AGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTA +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIADALT*SPGPNL
Trigger: TAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGC...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTTCTGACTGAACTTTaGGCAGATGCTCTGACTTGG +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLLTEL*ADALTW
Trigger: CCAAGTCAGAGCATCTGCCCAAAGTTCAGTCAGAAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGCTCATATAAACTATTaGCTGACACCGTGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLAHINY*LTPWRV
Trigger: TACCCTCCACGGTGTCAGCCAATAGTTTATATGAGC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATACAGCCTGAATAAGTaGTGTCGCTTTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVYSLNK*CRFVFL
Trigger: GAGGAAAACAAAGCGACACCACTTATTCAGGCTGTA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACCTTGGACATCTCTTTaGTTGACATTAGCACCATTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVPWTSL*LTLAPF
Trigger: GAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACAGTGGCATGTTGATTaGCACCTCGTTTTAGGAATA +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVQWHVD*HLVLGI
Trigger: TATTCCTAAAACGAGGTGCCAATCAACATGCCACTG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCTGATTATTCTGTATTaGAAACCAGCGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLLIILY*KPAPVP
Trigger: TGGAACAGGCGCTGGTTTTCAATACAGAATAATCAG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCGTAGCAATACTGGTCTaGACAGCCTTAATCCATGCC +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIVAILV*TALIHA
Trigger: GGCATGGATTAAGGCTGTTCAGACCAGTATTGCTAC...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCCACATATTTTGCTCTaGTATATGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLPHILL*YMPPSP
Trigger: AGGAGAAGGAGGCATATATCAGAGCAAAATATGTGG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCTAAACGTAACAAGGTaGCTATATCAGCATTGGCTG +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTLNVTR*LYQHWL
Trigger: CAGCCAATGCTGATATAGTCACCTTGTTACGTTTAG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAACACACACCTATTTCTaGACCACCAAAAAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQTHTYF*TTKKPQ
Trigger: CTGAGGCTTTTTGGTGGTTCAGAAATAGGTGTGTGT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCACCTGGCCAAAATGGTaGAACCCGTCTTTACTAAAA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTTWPKW*NPSLLK
Trigger: TTTTAGTAAAGACGGGTTTCACCATTTTGGCCAGGT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTAAAGGCCAATCACATTaGCTAATGAAGCCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLKGQSH*LMKPKS
Trigger: GCTTTTGGGCTTCATTAGTCAATGTGATTGGCCTTT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATCCAGCTCATGTCCATaGTCCAAAGTGATATTATAC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVSSSCP*SKVILY
Trigger: GTATAATATCACTTTGGATCATGGACATGAGCTGGA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCACCATGAGAATCCAGTaGGATAAAGCAATGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTTMRIQ*DKAMPS
Trigger: ACTTGGCATTGCTTTATCTCACTGGATTCTCATGGT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATCAGAAATCCTACCATaGGAATCCAGTGAGATAAAG +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVSEILP*ESSEIK
Trigger: CTTTATCTCACTGGATTCTCATGGTAGGATTTCTGA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp CTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATCTCCAAAATTCATGTTaGAACTTGATCTCCATTGTC +
Preference number: 4 (lower is better)
Translates to: LNDSIITRILSQVSNPIHLQNSC*NLISIV
Trigger: GACAATGGAGATCAAGTTTCAACATGAATTTTGGAG...ATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACAGTCGATCCAACTGTaGACCAAGATCCTTCATGTA +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQQSIQL*TKILHV
Trigger: TACATGAAGGATCTTGGTGCACAGTTGGATCGACTG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAATCTTTTCTCCTTTGCTaGATCCACAACCAGTCGATC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQSFLLC*IHNQSI
Trigger: GATCGACTGGTTGTGGATGCAGCAAAGGAGAAAAGA...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACCTTCCACCGTATCATaGGGTTCTAAAGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQPSTVS*GSKVIL
Trigger: CAGAATGACTTTAGAACCGCATGATACGGTGGAAGG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATTGCTGTCAGAATGTTaGTGGCTTCTTCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVLLSEC*WLLQLH
Trigger: ATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTATTTTCGGAATCTGCCTaGAGCATGCAACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVFSESA*SMQLFV
Trigger: AACAAAAAGTTGCATGCTCCAGGCAGATTCCGAAAA...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAATAAAGAAGTCAGCTATTGGCTGACACCGTaGAGGGTAAAGATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: HFTGMYMEDIRTANKEVSYWLTP*RVKILF
Trigger: GAAGAGAATCTTTACCCTCCACGGTGTCAGCCAATA...GCTGACTTCTTTATTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGATAAAGCTGAAGTCCTaGATTAAGATGTTTCGAGTC +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKIKLKS*IKMFRV
Trigger: GACTCGAAACATCTTAATCCAGGACTTCAGCTTTAT...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCCTTGGACATCTCTTTaGTTGACATTAGCACCATTC +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTPWTSL*LTLAPF
Trigger: GAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAATAAGTTTCATCACCTaGCTGTCCATAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVISFIT*LSIKSF
Trigger: GAAGGACTTTATGGACAGCCAGGTGATGAAACTTAT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAATGCCACCACCCATTaGCAAAAGAATCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVNATTH*QKNHFC
Trigger: ACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATTCACTGGAATGTATATaGAAGACATCCGTACAGCAA +
Preference number: 4 (lower is better)
Translates to: QVNVYCHRKSYECLKARDSLECI*KTSVQQ
Trigger: TTGCTGTACGGATGTCTTCCATATACATTCCAGTGA...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp AAACTTGGTCAAACTTGTCTCAACGACAGCATCATTACTAGAATACTGAGCCAGCTCGAATCCCATTCATaGACTGTTTATTTGCAACAC +
Preference number: 4 (lower is better)
Translates to: KLGQTCLNDSIITRILSQLESHS*TVYLQH
Trigger: GTGTTGCAAATAAACAGTTCATGAATGGGATTCGAG...CTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCTCGAATCCCATTCATaGACTGTTTATTTGCAACAC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLLESHS*TVYLQH
Trigger: GTGTTGCAAATAAACAGTTCATGAATGGGATTCGAG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCTCATTACTAGAATACTaGGCCAGGTCTCGAATCCCA +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYISLLEY*ARSRIP
Trigger: TGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGA...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGCCTTAATTGATCTCTaGGTTTGGTCAAACAGGATT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLALIDL*VWSNRI
Trigger: AATCCTGTTTGACCAAACTCAGAGATCAATTAAGGC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGAGAAATCCTTTTGTTaGATGGTGGAATGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVEKSFC*MVECFC
Trigger: GCAAAAACATTCCACCATTCAACAAAAGGATTTCTC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTGATTATTCTGTATTaGAAACCAGCGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLIILY*KPAPVP
Trigger: TGGAACAGGCGCTGGTTTTCAATACAGAATAATCAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACCACATATTTTGCTCTaGTATATGCCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQPHILL*YMPPSP
Trigger: AGGAGAAGGAGGCATATATCAGAGCAAAATATGTGG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp CATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAATAAAGAAGTCAGCTCCATAAAGTCCTTCTaGTTCCCGCATCTCTTCATT +
Preference number: 4 (lower is better)
Translates to: HFTGMYMEDIRTANKEVSSIKSF*FPHLFI
Trigger: AATGAAGAGATGCGGGAATCAGAAGGACTTTATGGA...GCTGACTTCTTTATTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCGGCCTAAATCTAGACTaGACTTCTGTCTACAGAAAT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTGLNLD*TSVYRN
Trigger: ATTTCTGTAGACAGAAGTTCAGTCTAGATTTAGGCC...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCAGTCGATCCAACTGTaGACCAAGATCCTTCATGTA +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIQSIQL*TKILHV
Trigger: TACATGAAGGATCTTGGTGCACAGTTGGATCGACTG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTTTTGCTCTGATATATaGCTCCTTCTCCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLFCSDI*LLLLSL
Trigger: CAAAGACAGGAGAAGGAGGCATATATCAGAGCAAAA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTTTTGCTCTGATATATaGCTCCTTCTCCTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTFCSDI*LLLLSL
Trigger: CAAAGACAGGAGAAGGAGGCATATATCAGAGCAAAA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCCTCTCCACATATTTTaGTCTGATATATGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLPLHIF*SDICLL
Trigger: AAGGAGGCATATATCAGAGCAAAATATGTGGAGAGG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAACATAGAAGAATCTTaGCTTTCTCCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTNIEES*LSPSGS
Trigger: TGAGCCTGAAGGAGAAAGGCAAGATTCTTCTATGTT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTAACATAGAAGAATCTTaGCTTTCTCCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLNIEES*LSPSGS
Trigger: TGAGCCTGAAGGAGAAAGGCAAGATTCTTCTATGTT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp CATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAATAAAGAAGTCAGCTATATCAGCATTGGCTaGTTCCACAGCTATGCTCAA +
Preference number: 4 (lower is better)
Translates to: HFTGMYMEDIRTANKEVSYISIG*FHSYAQ
Trigger: TTGAGCATAGCTGTGGAAGCAGCCAATGCTGATATA...GCTGACTTCTTTATTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCTCTGGATTATTGGATaGCATTTGGGAAAAATCACG +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLLWIIG*HLGKIT
Trigger: CGTGATTTTTCCCAAATGGCATCCAATAATCCAGAG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTTTTCGGAATCTGCCTaGAGCATGCAACTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLFSESA*SMQLFV
Trigger: AACAAAAAGTTGCATGCTCCAGGCAGATTCCGAAAA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAATCTAGGCTTCCTGTaGATGGAGATGATTTCTTAT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVNLGFL*MEMISY
Trigger: ATAAGAAATCATCTCCATCCACAGGAAGCCTAGATT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAATACAGCCTGAATAAGTaGTGTCGCTTTGTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQYSLNK*CRFVFL
Trigger: GAGGAAAACAAAGCGACACCACTTATTCAGGCTGTA...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACAGTGGCATGTTGATTaGCACCTCGTTTTAGGAATA +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQQWHVD*HLVLGI
Trigger: TATTCCTAAAACGAGGTGCCAATCAACATGCCACTG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTATAAGTTTCATCACCTaGCTGTCCATAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLISFIT*LSIKSF
Trigger: GAAGGACTTTATGGACAGCCAGGTGATGAAACTTAT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTTCTGTGAATCTTGCTaGAAACGATTTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKFCESC*KRFSFS
Trigger: AGAGAAACTAAATCGTTTCCAGCAAGATTCACAGAA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACATCTGTCAAGGTTTTaGGGAATCAACCCAACAATG +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQHLSRF*GINPTM
Trigger: CATTGTTGGGTTGATTCCCCAAAACCTTGACAGATG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
3UTR CAA 72 bp AATCAATGCCACCACCCATTGGCAAAAGAATCACTTTaGTCTAACCTCCTATCATCTTGTAACCTAGAGATG +
Preference number: 4 (lower is better)
Translates to: NQCHHPLAKESL*SNLLSSCNLEM
Trigger: CATCTCTAGGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCGAGAAATCCTTTTGTTaGATGGTGGAATGTTTTTGC +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTEKSFC*MVECFC
Trigger: GCAAAAACATTCCACCATTCAACAAAAGGATTTCTC...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR TCA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTT +
Preference number: 4 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKSSELC*IPLSLL
Trigger: AAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGA...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGAAACATTTTCTTGTTaGTGTCAGAATGTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQETFSC*CQNVGG
Trigger: GCCACCAACATTCTGACAGCAACAAGAAAATGTTTC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAGTCTCATAAGGAATTaGCTTCACAACCACAGAGAT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQSLIRN*LHNHRD
Trigger: ATCTCTGTGGTTGTGAAGGCAATTCCTTATGAGACT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTGTCAGAATGTTGGTaGCTTCTTCAACTTCATGTT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLSECW*LLQLHV
Trigger: AACATGAAGTTGAAGAAGCCACCAACATTCTGACAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAATCTAGGCTTCCTGTaGATGGAGATGATTTCTTAT +
Preference number: 4 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTNLGFL*MEMISY
Trigger: ATAAGAAATCATCTCCATCCACAGGAAGCCTAGATT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAATGTCTTTGTCCTGGTTaGGGTTTCTTTATTCCCATT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQCLCPG*GFFIPI
Trigger: AATGGGAATAAAGAAACCCCAACCAGGACAAAGACA...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTATAAAGCTGAAGTCCTaGATTAAGATGTTTCGAGTC +
Preference number: 4 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLIKLKS*IKMFRV
Trigger: GACTCGAAACATCTTAATCCAGGACTTCAGCTTTAT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAACCTTGGACATCTCTTTaGTTGACATTAGCACCATTC +
Preference number: 4 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKPWTSL*LTLAPF
Trigger: GAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGG...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp TTTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAACAGTGGCATGTTGATTaGCACCTCGTTTTAGGAATA +
Preference number: 4 (lower is better)
Translates to: FTIPFISLECIWKTSVQQQWHVD*HLVLGI
Trigger: TATTCCTAAAACGAGGTGCCAATCAACATGCCACTG...TTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGTTTCTCTGGATTATTaGATGCCATTTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVVSLDY*MPFGKN
Trigger: ATTTTTCCCAAATGGCATCCAATAATCCAGAGAAAC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAGTTTGGCCAAATTATaGAACCTTTTCTGTAATGTG +
Preference number: 4 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVSLAKL*NLFCNV
Trigger: CACATTACAGAAAAGGTTCCATAATTTGGCCAAACT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR TCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCTCGAATCCCATTCATaGACTGTTTATTTGCAACAC +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYILESHS*TVYLQH
Trigger: GTGTTGCAAATAAACAGTTCATGAATGGGATTCGAG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR GCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCCTCTCCACATATTTTaGTCTGATATATGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIPLHIF*SDICLL
Trigger: AAGGAGGCATATATCAGAGCAAAATATGTGGAGAGG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR GCA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAAAACATAGAAGAATCTTaGCTTTCTCCTTCAGGCTCA +
Preference number: 4 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKNIEES*LSPSGS
Trigger: TGAGCCTGAAGGAGAAAGGCAAGATTCTTCTATGTT...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR GCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCTCTGGATTATTGGATaGCATTTGGGAAAAATCACG +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYILWIIG*HLGKIT
Trigger: CGTGATTTTTCCCAAATGGCATCCAATAATCCAGAG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCTGTCAGAATGTTGGTaGCTTCTTCAACTTCATGTT +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYILSECW*LLQLHV
Trigger: AACATGAAGTTGAAGAAGCCACCAACATTCTGACAG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCTGTCTTTGTCCTGGTTaGGGTTTCTTTATTCCCATT +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYICLCPG*GFFIPI
Trigger: AATGGGAATAAAGAAACCCCAACCAGGACAAAGACA...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CCA 90 bp ATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATGAACTGTTTATTCAGACACTAATCTGCTaGCATCTTTATCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: IITRILSQVSNPIHELFIQTLIC*HLYLGL
Trigger: AAGTCCAAGATAAAGATGCCAGCAGATTAGTGTCTG...AATAAACAGTTCATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACATGAACTGTTTATTTaGAACACAAAAGGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQHELFI*NTKGFS
Trigger: GGAAAAGCCTTTTGTGTTGCAAATAAACAGTTCATG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTGACTTTTTCGAATTaGTTCTTGGCATCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLTFSN*FLASLN
Trigger: ATTCAAAGATGCCAAGAAGCAATTCGAAAAAGTCAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CCA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAAATAAAGCTGAAGTCCTaGATTAAGATGTTTCGAGTC +
Preference number: 4 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKIKLKS*IKMFRV
Trigger: GACTCGAAACATCTTAATCCAGGACTTCAGCTTTAT...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CCA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAATTCTGTGAATCTTGCTaGAAACGATTTAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: YWTITCHLRSITDRIYEQFCESC*KRFSFS
Trigger: AGAGAAACTAAATCGTTTCCAGCAAGATTCACAGAA...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR GCA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCTGACTTTTTCGAATTaGTTCTTGGCATCTTTGAAT +
Preference number: 4 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYILTFSN*FLASLN
Trigger: ATTCAAAGATGCCAAGAAGCAATTCGAAAAAGTCAG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326793.11
3UTR CAA 72 bp ACATACTTTTATTCCATCGATACATCTGTCAAGGTTTaGGGGAATCAACCCAACAATGAAGAACTACACATT +
Preference number: 4 (lower is better)
Translates to: TYFYSIDTSVKV*GNQPNNEELHI
Trigger: AATGTGTAGTTCTTCATTGTTGGGTTGATTCCCCAAAACCTTGACAGATGTATCGATGGAATAAAAGTATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS CCA 90 bp TGGGAGCATCCGACTGTGATCCGGGCCCTCCTGGGCAGAGGCTGCTaGAAGAGGAACACACAGGCAATCTTCACGGCCCTCCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: WEHPTVIRALLGRGC*KRNTQAIFTALLLP
Trigger: CGGAAGTAGGAGGGCCGTGAAGATTGCCTGTGTGTTCCTCTTCCAGCAGCCTCTGCCCAGGAGGGCCCGGATCACAGTCGGATGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490224.1
CDS TCA 90 bp AGAAGGGCAACCCATGTGAATCGGAGTGCCCCCATGTCAACTCTGTaGCAGATCCACTGGGAGCATCCGACTGTGATCCGGGCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RRATHVNRSAPMSTL*QIHWEHPTVIRALL
Trigger: CAGGAGGGCCCGGATCACAGTCGGATGCTCCCAGTGGATCTGTCACAGAGTTGACATGGGGGCACTCCGATTCACATGGGTTGCCCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490224.1
CDS GCA 90 bp GACCGCCTCTCACATAGAAAGAAGGGCAACCCATGTGAATCGGAGTaGCCCCATGTCAACTCTGTGACAGATCCACTGGGAGCATCCGAC +
Preference number: 5 (lower is better)
Translates to: DRLSHRKKGNPCESE*PHVNSVTDPLGASD
Trigger: GTCGGATGCTCCCAGTGGATCTGTCACAGAGTTGACATGGGGGCACTCCGATTCACATGGGTTGCCCTTCTTTCTATGTGAGAGGCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490224.1
CDS CCA 90 bp CCTGTGTGCCCTAAGACGGTGGCATGGTGCAATGGTCCCCGCCCTTaGACATCTCTTTGGTTGACATTAGCACCATTCTGTAGGAGGAAC +
Preference number: 5 (lower is better)
Translates to: PVCPKTVAWCNGPRP*TSLWLTLAPFCRRN
Trigger: GTTCCTCCTACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS GCA 90 bp AGGAATAAACATACCTGCCCTGTGTGCCCTAAGACGGTGGCATGGTaGAATGGTCCCCGCCCTTGGACATCTCTTTGGTTGACATTAGCA +
Preference number: 5 (lower is better)
Translates to: RNKHTCPVCPKTVAW*NGPRPWTSLWLTLA
Trigger: TGCTAATGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGGGCAGGTATGTTTATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCCGGCCGCGACTAGCGTaGCGCGGAGCTGCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIRPRLA*RGAAKG
Trigger: GCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCG...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp GAGGACACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTGGCCCTCACCACTAATGGTCCCTTTTTaGCCCTTCCACCTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: EDTSTRCHLESRDSWPSPLMVPF*PFHLLP
Trigger: TGGCAGAAGGTGGAAGGGCAAAAAAGGGACCATTAG...TGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGTGTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS CCA 90 bp TTTAGGAATAAACATACCTGCCCTGTGTGCCCTAAGACGGTGGCATaGTGCAATGGTCCCCGCCCTTGGACATCTCTTTGGTTGACATTA +
Preference number: 5 (lower is better)
Translates to: FRNKHTCPVCPKTVA*CNGPRPWTSLWLTL
Trigger: TAATGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGGGCAGGTATGTTTATTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS GCA 90 bp CTCTCTATAAGCAGTAGCAATACTGGTCTGAACAGCCTTAATCCATaGCTGGCGCAGCTTTTCGGAATCTGCCTGGAGCATGCAACTTCT +
Preference number: 5 (lower is better)
Translates to: LSISSSNTGLNSLNP*LAQLFGICLEHATS
Trigger: AGAAGTTGCATGCTCCAGGCAGATTCCGAAAAGCTGCGCCAGGCATGGATTAAGGCTGTTCAGACCAGTATTGCTACTGCTTATAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484296.1
CDS CCA 90 bp AGAAGAGTGAATCTAGCTCATCAGGACAAAACAGAGACTCCCGCCTaGCCTCGTCGCTATTTACAGCAATCACTGAACTTTGGGCAGATG +
Preference number: 5 (lower is better)
Translates to: RRVNLAHQDKTETPA*PRRYLQQSLNFGQM
Trigger: CATCTGCCCAAAGTTCAGTGATTGCTGTAAATAGCGACGAGGCCAGGCGGGAGTCTCTGTTTTGTCCTGATGAGCTAGATTCACTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGTCACAACAGCTGGCATaGCCAGGGATACACTGGACC +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKSQQLA*PGIHWT
Trigger: GGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTGA...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAAGGTGATGCCCAGGTaGATGCTGGCCCACCGTGGA +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTKVMPR*MLAHRG
Trigger: TCCACGGTGGGCCAGCATCAACCTGGGCATCACCTT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCAATGGTCCCCGCCCTaGGACATCTCTTTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKQWSPP*DISLVD
Trigger: GTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GAGCAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGCAATGGTCCCCGCCCTaGGACATCTCTTTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: EQVNVYCHRKSYECLKARQWSPP*DISLVD
Trigger: GTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTG...CCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS TCA 90 bp CCACAGTCACAACAGCTGGCATTGCCAGGGATACACTGGACCCGCTaGAGCGCACTTTCTCCTTTCAATAATTTCTCTTTGGACTCATTT +
Preference number: 5 (lower is better)
Translates to: PQSQQLALPGIHWTR*SALSPFNNFSLDSF
Trigger: AAATGAGTCCAAAGAGAAATTATTGAAAGGAGAAAGTGCGCTTCAGCGGGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTGACTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS GCA 90 bp CTCTCTATAAGCAGTAGCAATACTGGTCTGAACAGCCTTAATCCATaGCTGGCGCAGCTTTTCGGAATCTGCCTGGAGCATGCAACTTTT +
Preference number: 5 (lower is better)
Translates to: LSISSSNTGLNSLNP*LAQLFGICLEHATF
Trigger: AAAAGTTGCATGCTCCAGGCAGATTCCGAAAAGCTGCGCCAGGCATGGATTAAGGCTGTTCAGACCAGTATTGCTACTGCTTATAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000618471.4
ENST00000635383.1
CDS GCA 90 bp GCAAGTGAAGTTTTAGCATCTCGTGACAGAGAGGAAAGGCTGCCTTaGAGTGACTGCAGTTGGAAAGTCTGTAAGACCAAACACGCATGT +
Preference number: 5 (lower is better)
Translates to: ASEVLASRDREERLP*SDCSWKVCKTKHAC
Trigger: ACATGCGTGTTTGGTCTTACAGACTTTCCAACTGCAGTCACTGCAAGGCAGCCTTTCCTCTCTGTCACGAGATGCTAAAACTTCACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471593.1
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCGCCTGTTCCAAGTTTaGAAGGCATTGCTGGCTCGT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKRLFQV*KALLAR
Trigger: ACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGCG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS TCA 90 bp GACACCGTGGAGGGTAAAGATTCTCTTCCATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTTCTGACTGAACTTTGGGCAGATGCT +
Preference number: 5 (lower is better)
Translates to: DTVEGKDSLPSSELC*IPLSLLLTELWADA
Trigger: AGCATCTGCCCAAAGTTCAGTCAGAAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS TCA 90 bp ACAGCTATGCTCAAAGGGTCTTTCCCTTCTTCATCAGTGGCATGTTaGTTGGCACCTCGTTTTAGGAATAAACATACCTGCCCTGTGTGC +
Preference number: 5 (lower is better)
Translates to: TAMLKGSFPSSSVAC*LAPRFRNKHTCPVC
Trigger: GCACACAGGGCAGGTATGTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTTTGAGCATAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 90 bp CCACTGTCATTACTTCTGACTGAACTTTGGGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTAGAAATGCTCAGCCTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: PLSLLLTELWADALT*SPGPNLEMLSLFSS
Trigger: TGAAGAAAAGAGGCTGAGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGTCAGAAGTAATGACAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS CCA 90 bp CTATGCTCAAAGGGTCTTTCCCTTCTTCATCAGTGGCATGTTGATTaGCACCTCGTTTTAGGAATAAACATACCTGCCCTGTGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: LCSKGLSLLHQWHVD*HLVLGINIPALCAL
Trigger: TAGGGCACACAGGGCAGGTATGTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTTTGAGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 90 bp CTGCTTCCACAGCTATGCTCAAAGGGTCTTTCCCTTCTTCATCAGTaGCATGTTGATTGGCACCTCGTTTTAGGAATAAACATACCTGCC +
Preference number: 5 (lower is better)
Translates to: LLPQLCSKGLSLLHQ*HVDWHLVLGINIPA
Trigger: GGCAGGTATGTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTTTGAGCATAGCTGTGGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTCACAACAGCTGGCATaGCCAGGGATACACTGGACC +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLSQQLA*PGIHWT
Trigger: GGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTGA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCTCCTTCTCCTGTCTTaGTCCTGGTTGGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKLLLLS*SWLGFL
Trigger: AAGAAACCCCAACCAGGACAAAGACAGGAGAAGGAG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCGGCAGATGCTCTGACTaGGTCCCCTGGCCCAAATTT +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTGRCSD*VPWPKF
Trigger: AAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCC...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCAATGGTCCCCGCCCTaGGACATCTCTTTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLQWSPP*DISLVD
Trigger: GTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS CCA 90 bp CTTGCCTTTCTCCTTCAGGCTCATATAAACTATTGGCTGACACCGTaGAGGGTAAAGATTCTCTTCCATCATCAGAGCTCTGCTGAATTC +
Preference number: 5 (lower is better)
Translates to: LAFLLQAHINYWLTP*RVKILFHHQSSAEF
Trigger: GAATTCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGGTGTCAGCCAATAGTTTATATGAGCCTGAAGGAGAAAGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000450200.1
ENST00000466876.2
ENST00000618471.4
CDS CCA 90 bp TCGCTATTTACAGCAATCACTGAACTTTGGGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTAGAAATGCTCAGCCTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLFTAITELWADALT*SPGPNLEMLSLFSS
Trigger: TGAAGAAAAGAGGCTGAGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGTGATTGCTGTAAATAGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS CCA 90 bp GTAAGAAAGTTTGCCATACCTGAACTTTGGGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTAGAAATGCTCAGCCTCTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: VRKFAIPELWADALT*SPGPNLEMLSLFSS
Trigger: TGAAGAAAAGAGGCTGAGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGGTATGGCAAACTTTCTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475905.5
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCGCCTGTTCCAAGTTTaGAAGGCATTGCTGGCTCGT +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLRLFQV*KALLAR
Trigger: ACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGCG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGCATGCAACTTTTTGTaGGCGAGACCACCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVACNFL*ARPPQS
Trigger: GCTTTGAGGTGGTCTCGCCAACAAAAAGTTGCATGC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGGCAGATGCTCTGACTaGGTCCCCTGGCCCAAATTT +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQGRCSD*VPWPKF
Trigger: AAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGGCTCATATAAACTATaGGCTGACACCGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVGSYKL*ADTVEG
Trigger: ACCCTCCACGGTGTCAGCCAATAGTTTATATGAGCC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATGGCTCATATAAACTATaGGCTGACACCGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: QVNVYCHRKSYECLKARDGSYKL*ADTVEG
Trigger: ACCCTCCACGGTGTCAGCCAATAGTTTATATGAGCC...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS CCA 90 bp ACTGGACCCGCTGAAGCGCACTTTCTCCTTTCAATAATTTCTCTTTaGACTCATTTCCAGAATCTAGGCTTCCTGTGGATGGAGATGATT +
Preference number: 5 (lower is better)
Translates to: TGPAEAHFLLSIISL*THFQNLGFLWMEMI
Trigger: AATCATCTCCATCCACAGGAAGCCTAGATTCTGGAAATGAGTCCAAAGAGAAATTATTGAAAGGAGAAAGTGCGCTTCAGCGGGTCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATA +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKALLAR*NRYPSI
Trigger: TATGGAAGGATATCTGTTCAAACGAGCCAGCAATGC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGCATGCAACTTTTTGTaGGCGAGACCACCTCAAAGC +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLACNFL*ARPPQS
Trigger: GCTTTGAGGTGGTCTCGCCAACAAAAAGTTGCATGC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGGAGCATGCAACTTTTaGTTGGCGAGACCACCTCAA +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLGACNF*LARPPQ
Trigger: TTGAGGTGGTCTCGCCAACAAAAAGTTGCATGCTCC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCCTCCTTCTCCTGTCTTaGTCCTGGTTGGGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTLLLLS*SWLGFL
Trigger: AAGAAACCCCAACCAGGACAAAGACAGGAGAAGGAG...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCGGCTCATATAAACTATaGGCTGACACCGTGGAGGGT +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTGSYKL*ADTVEG
Trigger: ACCCTCCACGGTGTCAGCCAATAGTTTATATGAGCC...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCCCTTGGACATCTCTTaGGTTGACATTAGCACCATT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKPLDIS*VDISTI
Trigger: AATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGTGACTATATCAGCATaGGCTGCTTCCACAGCTATG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVVTISA*AASTAM
Trigger: CATAGCTGTGGAAGCAGCCAATGCTGATATAGTCAC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATGTGACTATATCAGCATaGGCTGCTTCCACAGCTATG +
Preference number: 5 (lower is better)
Translates to: QVNVYCHRKSYECLKARDVTISA*AASTAM
Trigger: CATAGCTGTGGAAGCAGCCAATGCTGATATAGTCAC...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGCAATGCCACCACCCATaGGCAAAAGAATCACTTTTG +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKQCHHP*AKESLL
Trigger: CAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATTG...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp CTTGAAGACTGTCAGAAAACTTGGTCAAACTTGTCTCAACGACAGCATCATTACCAACAAGGTGCCATCTaGAAAGCAGAGATAGCTGGC +
Preference number: 5 (lower is better)
Translates to: LEDCQKTWSNLSQRQHHYQQGAI*KAEIAG
Trigger: GCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTG...GTAATGATGCTGTCGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS TCA 90 bp GACACCGTGGAGGGTAAAGATTCTCTTCCATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTTCTGATACTACGCAGTTTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: DTVEGKDSLPSSELC*IPLSLLLILRSFEE
Trigger: TTCTTCAAAACTGCGTAGTATCAGAAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS-3UTR CAA 90 bp CTCAACGACAGCATCATTACTAGAATACTGAGCCAGGTCTCGAATCCCATTCATAGACTGTCAGAAAACTaGGTCAAACTTGTCTCAACG +
Preference number: 5 (lower is better)
Translates to: LNDSIITRILSQVSNPIHRLSEN*VKLVST
Trigger: CGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCT...ATGAATGGGATTCGAGACCTGGCTCAGTATTCTAGTAATGATGCTGTCGTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATA +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVALLAR*NRYPSI
Trigger: TATGGAAGGATATCTGTTCAAACGAGCCAGCAATGC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACTGTCTTTGTCCTGGTaGGGGTTTCTTTATTCCCAT +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVLSLSW*GFLYSH
Trigger: ATGGGAATAAAGAAACCCCAACCAGGACAAAGACAG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GAGCAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGTGGACATCTCTTTGGTaGACATTAGCACCATTCTGT +
Preference number: 5 (lower is better)
Translates to: EQVNVYCHRKSYECLKARWTSLW*TLAPFC
Trigger: ACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCA...CCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTACAATGCCACCACCCATaGGCAAAAGAATCACTTTTG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVQCHHP*AKESLL
Trigger: CAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATTG...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAGAAAACACATATTCTaGAGGCAGGCAGGACAGTTG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVRKHIF*RQAGQL
Trigger: CAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGACATCTGTCAAGGTTTaGGGGAATCAACCCAACAAT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKTSVKV*GNQPNN
Trigger: ATTGTTGGGTTGATTCCCCAAAACCTTGACAGATGT...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGAGTCTCATAAGGAATaGCCTTCACAACCACAGAGA +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVESHKE*PSQPQR
Trigger: TCTCTGTGGTTGTGAAGGCAATTCCTTATGAGACTC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS CCA 90 bp CGAGGGCTATGTGTCGGAAACATTTTCTTGTTGCTGTCAGAATGTTaGTGGCTTCTTCAACTTCATGTTGTTTGTTTCTTTGTACTTGGG +
Preference number: 5 (lower is better)
Translates to: RGLCVGNIFLLLSEC*WLLQLHVVCFFVLG
Trigger: CCCAAGTACAAAGAAACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CCA 90 bp AAAATAGCTATAGACACAGTAAGAAAGTTTGCCATACCTGAACTTTaGGCAGATGCTCTGACTTGGTCCCCTGGCCCAAATTTAGAAATG +
Preference number: 5 (lower is better)
Translates to: KIAIDTVRKFAIPEL*ADALTWSPGPNLEM
Trigger: CATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGGTATGGCAAACTTTCTTACTGTGTCTATAGCTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475905.5
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAGACTGTCAGAAAACTaGGTCAAACTTGTCTCAACG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVRLSEN*VKLVST
Trigger: CGTTGAGACAAGTTTGACCAAGTTTTCTGACAGTCT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAGTCGGAAACATTTTCTaGTTGCTGTCAGAATGTTGG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVVGNIF*LLSECW
Trigger: CCAACATTCTGACAGCAACAAGAAAATGTTTCCGAC...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTCCCTTGGACATCTCTTaGGTTGACATTAGCACCATT +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLPLDIS*VDISTI
Trigger: AATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGG...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAGTGACTATATCAGCATaGGCTGCTTCCACAGCTATG +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQVTISA*AASTAM
Trigger: CATAGCTGTGGAAGCAGCCAATGCTGATATAGTCAC...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACATCTGTCAAGGTTTaGGGGAATCAACCCAACAAT +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVTSVKV*GNQPNN
Trigger: ATTGTTGGGTTGATTCCCCAAAACCTTGACAGATGT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS GCA 90 bp CTGAAGCACATAATCGAGGGCTATGTGTCGGAAACATTTTCTTGTTaGTGTCAGAATGTTGGTGGCTTCTTCAACTTCATGTTGTTTGTT +
Preference number: 5 (lower is better)
Translates to: LKHIIEGYVSETFSC*CQNVGGFFNFMLFV
Trigger: AACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCGATTATGTGCTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CCA 90 bp GGGCTATGTGTCGGAAACATTTTCTTGTTGCTGTCAGAATGTTGGTaGCTTCTTCAACTTCATGTTGTTTGTTTCTTTGTACTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: GLCVGNIFLLLSECW*LLQLHVVCFFVLGH
Trigger: ATGCCCAAGTACAAAGAAACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTCGGAAACATTTTCTaGTTGCTGTCAGAATGTTGG +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLVGNIF*LLSECW
Trigger: CCAACATTCTGACAGCAACAAGAAAATGTTTCCGAC...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGACTGGAGAAATCCTTTaGTTGAATGGTGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKTGEIL*LNGGMF
Trigger: AAACATTCCACCATTCAACAAAAGGATTTCTCCAGT...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTACTGATTATTCTGTATaGAAAACCAGCGCCTGTTCC +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLTDYSV*KTSACS
Trigger: GGAACAGGCGCTGGTTTTCAATACAGAATAATCAGT...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTGTCTTTGTCCTGGTaGGGGTTTCTTTATTCCCAT +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLSLSW*GFLYSH
Trigger: ATGGGAATAAAGAAACCCCAACCAGGACAAAGACAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTGGACATCTCTTTGGTaGACATTAGCACCATTCTGT +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTWTSLW*TLAPFC
Trigger: ACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp AAGAAAACACATATTCTTGAGGCAGGCAGGACAGTTGGCTTCCACTTGATGAAGGCAAAAGAATCACTTTaGTCTAACCTCCTATCATCT +
Preference number: 5 (lower is better)
Translates to: KKTHILEAGRTVGFHLMKAKESL*SNLLSS
Trigger: AGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGC...CTTCATCAAGTGGAAGCCAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS CCA 90 bp TCAATAATTTCTCTTTGGACTCATTTCCAGAATCTAGGCTTCCTGTaGATGGAGATGATTTCTTATCCAGCTTCTCTGATTCATCACCCT +
Preference number: 5 (lower is better)
Translates to: SIISLWTHFQNLGFL*MEMISYPASLIHHP
Trigger: AGGGTGATGAATCAGAGAAGCTGGATAAGAAATCATCTCCATCCACAGGAAGCCTAGATTCTGGAAATGAGTCCAAAGAGAAATTATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS-3UTR CAA 90 bp GCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAAAACAGATCATATCCTaGATGAAAGAAGGCCAAATG +
Preference number: 5 (lower is better)
Translates to: ATTHWQKNHFCLTSYHLVKQIIS*MKEGQM
Trigger: CATTTGGCCTTCTTTCATCAAGGATATGATCTGTTT...TACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAATGGACATCTCTTTGGTaGACATTAGCACCATTCTGT +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQWTSLW*TLAPFC
Trigger: ACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCA...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TTACCATTCCATTCATTTCACTGGAATGTATATGGAAGACATCCGTACAGCAAACCCTTGGACATCTCTTaGGTTGACATTAGCACCATT +
Preference number: 5 (lower is better)
Translates to: LPFHSFHWNVYGRHPYSKPLDIS*VDISTI
Trigger: AATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGG...TTTGCTGTACGGATGTCTTCCATATACATTCCAGTGAAATGAATGGAATGGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCAGAAAACACATATTCTaGAGGCAGGCAGGACAGTTG +
Preference number: 5 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIRKHIF*RQAGQL
Trigger: CAACTGTCCTGCCTGCCTCAAGAATATGTGTTTTCT...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp AATGCCACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTTTACATGCATGCAGTTaGGCCAAATTATGGAACCTT +
Preference number: 5 (lower is better)
Translates to: NATTHWQKNHFCLTSYHLLHACS*AKLWNL
Trigger: AAGGTTCCATAATTTGGCCAAACTGCATGCATGTAA...AAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGTGGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCAAATGTGTACTTGTATaGCTAGGCTCCCTGCAATAT +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTKCVLV*LGSLQY
Trigger: ATATTGCAGGGAGCCTAGCAATACAAGTACACATTT...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp CAAGTCAATGTGTACTGTCATAGGAAGAGTTACGAATGTTTAAAGGCCCGGGATGTTATTAGTAGAATATaGACCTGGCTGTCCATAAAG +
Preference number: 5 (lower is better)
Translates to: QVNVYCHRKSYECLKARDVISRI*TWLSIK
Trigger: CTTTATGGACAGCCAGGTCAATATTCTACTAATAAC...ATCCCGGGCCTTTAAACATTCGTAACTCTTCCTATGACAGTACACATTGACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466876.2
CDS-3UTR CAA 90 bp ACCACCCATTGGCAAAAGAATCACTTTTGTCTAACCTCCTATCATCTTGTAACCTTAAAGATCGTACTTTaGAAAAATGAACCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: TTHWQKNHFCLTSYHLVTLKIVL*KNEPQG
Trigger: GCCTTGGGGTTCATTTTTCAAAAGTACGATCTTTAA...GGTTACAAGATGATAGGAGGTTAGACAAAAGTGATTCTTTTGCCAATGGGTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAACTACAAATCAGATTTTaGCCTTTAGTGAAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQLQIRF*PLVKVP
Trigger: AGGCACCTTCACTAAAGGCAAAAATCTGATTTGTAG...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAAAAGGCCAATCACATaGACTAATGAAGCCCAAAAG +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQKRPIT*TNEAQK
Trigger: CTTTTGGGCTTCATTAGTCAATGTGATTGGCCTTTT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp TACTGGACAATAACCTGTCACCTAAGAAGTATAACCGACCGCATTTATGAACAAAAACAGATCATATCCTaGATGAAAGAAGGCCAAATG +
Preference number: 5 (lower is better)
Translates to: YWTITCHLRSITDRIYEQKQIIS*MKEGQM
Trigger: CATTTGGCCTTCTTTCATCAAGGATATGATCTGTTT...TTGTTCATAAATGCGGTCGGTTATACTTCTTAGGTGACAGGTTATTGTCCAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCACTGGAGAAATCCTTTaGTTGAATGGTGGAATGTTT +
Preference number: 5 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYITGEIL*LNGGMF
Trigger: AAACATTCCACCATTCAACAAAAGGATTTCTCCAGT...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCTTAAAGATCGTACTTTaGAAAAATGAACCCCAAGGC +
Preference number: 5 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYILKIVL*KNEPQG
Trigger: GCCTTGGGGTTCATTTTTCAAAAGTACGATCTTTAA...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS-3UTR CAA 90 bp CCGTATCATGCGGTTCTAAAGTCATTCTGGACATACAATCTACAAAAATACATCGGTTCTCCAGAATATTaGGAGTCTTTGTTATCAAAG +
Preference number: 5 (lower is better)
Translates to: PYHAVLKSFWTYNLQKYIGSPEY*ESLLSK
Trigger: CTTTGATAACAAAGACTCCAAATATTCTGGAGAACC...GATGTATTTTTGTAGATTGTATGTCCAGAATGACTTTAGAACCGCATGATACGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000326793.11
CDS CAA 72 bp CAGACGGCTACGGCGGGCGCACGGCCGCGACTAGCGTaGCGCGGAGCTGCGAAGGGCGCCTCGCCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: QTATAGARPRLA*RGAAKGASPAG
Trigger: ACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000480906.5
ENST00000490224.1
CDS CCA 72 bp ACGCATCCACCGCGGGCGCCCTCCGGAGAGTCGCTCTaGCCGGGGGCACCGCGAAGCAGAAGTCGGCGTCCC +
Preference number: 6 (lower is better)
Translates to: THPPRAPSGESL*PGAPRSRSRRP
Trigger: GGGACGCCGACTTCTGCTTCGCGGTGCCCCCGGCCAGAGCGACTCTCCGGAGGGCGCCCGCGGTGGATGCGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481463.5
CDS CAA 90 bp GCTGGGACGCAGACGGCTACGGCGGGCGCACGGCCGCGACTAGCGTaGCGCGGAGCTGCGAAGGGCGCCTCGCCCGCTGGTCATAGCAGC +
Preference number: 6 (lower is better)
Translates to: AGTQTATAGARPRLA*RGAAKGASPAGHSS
Trigger: GCTGCTATGACCAGCGGGCGAGGCGCCCTTCGCAGCTCCGCGCAACGCTAGTCGCGGCCGTGCGCCCGCCGTAGCCGTCTGCGTCCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000480906.5
ENST00000490224.1
CDS GCA 72 bp GTCCTCCGCCCTCAGCCCGGTACCTCTCGACAGCTGTaGCCCCTTCAACGAGCTGAAGCGGGGCGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: VLRPQPGTSRQL*PLQRAEAGRVL
Trigger: AAGGACTCGCCCCGCTTCAGCTCGTTGAAGGGGGCACAGCTGTCGAGAGGTACCGGGCTGAGGGCGGAGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490224.1
CDS GCA 72 bp GTGGATCTGCCAGGCCACAGTCACAACAGCTGGCATTaGCAGGGATACACTGGACCCGCTGAAGCGCACTTT +
Preference number: 6 (lower is better)
Translates to: VDLPGHSHNSWH*QGYTGPAEAHF
Trigger: AAAGTGCGCTTCAGCGGGTCCAGTGTATCCCTGGCAATGCCAGCTGTTGTGACTGTGGCCTGGCAGATCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326793.11
ENST00000475905.5
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS GCA 72 bp CATACCTGCCCTGTGTGCCCTAAGACGGTGGCATGGTaGAATGGTCCCCGCCCTTGGACATCTCTTTGGTTG +
Preference number: 6 (lower is better)
Translates to: HTCPVCPKTVAW*NGPRPWTSLWL
Trigger: CAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGGGCAGGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp AAACATACCTGCCCTGTGTGCCCTAAGACGGTGGCATaGTGCAATGGTCCCCGCCCTTGGACATCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: KHTCPVCPKTVA*CNGPRPWTSLW
Trigger: CCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGGGCAGGTATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp GGAATAAACATACCTGCCCTGTGTGCCCTAAGACGGTaGCATGGTGCAATGGTCCCCGCCCTTGGACATCTC +
Preference number: 6 (lower is better)
Translates to: GINIPALCALRR*HGAMVPALGHL
Trigger: GAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGGGCACACAGGGCAGGTATGTTTATTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp CCTAAGACGGTGGCATGGTGCAATGGTCCCCGCCCTTaGACATCTCTTTGGTTGACATTAGCACCATTCTGT +
Preference number: 6 (lower is better)
Translates to: PKTVAWCNGPRP*TSLWLTLAPFC
Trigger: ACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGCCACCGTCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS GCA 72 bp AGCAGTAGCAATACTGGTCTGAACAGCCTTAATCCATaGCTGGCGCAGCTTTTCGGAATCTGCCTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: SSSNTGLNSLNP*LAQLFGICLEH
Trigger: ATGCTCCAGGCAGATTCCGAAAAGCTGCGCCAGGCATGGATTAAGGCTGTTCAGACCAGTATTGCTACTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS GCA 72 bp ACACGCATGTTGACACTAAGGTGCATCCACACCCTCTaGCCCACAACACACACACGGACACACACTTTTACA +
Preference number: 6 (lower is better)
Translates to: TRMLTLRCIHTL*PTTHTRTHTFT
Trigger: TGTAAAAGTGTGTGTCCGTGTGTGTGTTGTGGGGCAGAGGGTGTGGATGCACCTTAGTGTCAACATGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471593.1
CDS GCA 72 bp TCACATAGAAAGAAGGGCAACCCATGTGAATCGGAGTaGCCCCATGTCAACTCTGTGACAGATCCACTGGGA +
Preference number: 6 (lower is better)
Translates to: SHRKKGNPCESE*PHVNSVTDPLG
Trigger: TCCCAGTGGATCTGTCACAGAGTTGACATGGGGGCACTCCGATTCACATGGGTTGCCCTTCTTTCTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490224.1
CDS CCA 72 bp TTAATCCATGCCTGGCGCAGCTTTTCGGAATCTGCCTaGAGCATGCAACTTTTTGTTGGCGAGACCACCTCA +
Preference number: 6 (lower is better)
Translates to: LIHAWRSFSESA*SMQLFVGETTS
Trigger: TGAGGTGGTCTCGCCAACAAAAAGTTGCATGCTCCAGGCAGATTCCGAAAAGCTGCGCCAGGCATGGATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000618471.4
ENST00000635383.1
CDS CCA 72 bp GCATGGTGCAATGGTCCCCGCCCTTGGACATCTCTTTaGTTGACATTAGCACCATTCTGTAGGAGGAACTCA +
Preference number: 6 (lower is better)
Translates to: AWCNGPRPWTSL*LTLAPFCRRNS
Trigger: TGAGTTCCTCCTACAGAATGGTGCTAATGTCAACCAAAGAGATGTCCAAGGGCGGGGACCATTGCACCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp CCCTCACCAGACACTAATCTGCTGGCATCTTTATCTTaGACTTCCCAGCTCCAGAATGGATGTCACGCACTG +
Preference number: 6 (lower is better)
Translates to: PSPDTNLLASLS*TSQLQNGCHAL
Trigger: CAGTGCGTGACATCCATTCTGGAGCTGGGAAGTCCAAGATAAAGATGCCAGCAGATTAGTGTCTGGTGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS CCA 72 bp ACAGCAATCACTGAACTTTGGGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTAGAAATGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: TAITELWADALT*SPGPNLEMLSL
Trigger: GAGGCTGAGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGTGATTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS CCA 72 bp TTTGCCATACCTGAACTTTGGGCAGATGCTCTGACTTaGTCCCCTGGCCCAAATTTAGAAATGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: FAIPELWADALT*SPGPNLEMLSL
Trigger: GAGGCTGAGCATTTCTAAATTTGGGCCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGGTATGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475905.5
CDS TCA 72 bp CAACAGCTGGCATTGCCAGGGATACACTGGACCCGCTaGAGCGCACTTTCTCCTTTCAATAATTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: QQLALPGIHWTR*SALSPFNNFSL
Trigger: CAAAGAGAAATTATTGAAAGGAGAAAGTGCGCTTCAGCGGGTCCAGTGTATCCCTGGCAATGCCAGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS TCA 72 bp TACAGCCTGAATAAGTGGTGTCGCTTTGTTTTCCTCTaGATTGGCCCAGTTCACGTCTGCACCATGAGCCAA +
Preference number: 6 (lower is better)
Translates to: YSLNKWCRFVFL*IGPVHVCTMSQ
Trigger: TTGGCTCATGGTGCAGACGTGAACTGGGCCAATTCAGAGGAAAACAAAGCGACACCACTTATTCAGGCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp AATCTAGCTCATCAGGACAAAACAGAGACTCCCGCCTaGCCTCGTCGCTATTTACAGCAATCACTGAACTTT +
Preference number: 6 (lower is better)
Translates to: NLAHQDKTETPA*PRRYLQQSLNF
Trigger: AAAGTTCAGTGATTGCTGTAAATAGCGACGAGGCCAGGCGGGAGTCTCTGTTTTGTCCTGATGAGCTAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS CCA 72 bp ACATCAACAAGGTGCCATCTTGAAAGCAGAGATAGCTaGCCCTCACCAGACACTAATCTGCTGGCATCTTTA +
Preference number: 6 (lower is better)
Translates to: TSTRCHLESRDS*PSPDTNLLASL
Trigger: TAAAGATGCCAGCAGATTAGTGTCTGGTGAGGGCCAGCTATCTCTGCTTTCAAGATGGCACCTTGTTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447662.1
CDS CAA 90 bp GAAAACCAGCGCCTGTTCCAAGTTTTGAAGGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATAACTATGCCATTTGCAGCATCTACG +
Preference number: 6 (lower is better)
Translates to: ENQRLFQVLKALLAR*NRYPSITMPFAAST
Trigger: CGTAGATGCTGCAAATGGCATAGTTATGGAAGGATATCTGTTCAAACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGCGCTGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000618471.4
CDS TCA 72 bp AACTCACACGTCACCAAAGAGCCCCCTAATACAGCCTaGATAAGTGGTGTCGCTTTGTTTTCCTCTGAATTG +
Preference number: 6 (lower is better)
Translates to: NSHVTKEPPNTA*ISGVALFSSEL
Trigger: CAATTCAGAGGAAAACAAAGCGACACCACTTATTCAGGCTGTATTAGGGGGCTCTTTGGTGACGTGTGAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS TCA 72 bp AATAGCTATAGACACAGTAAGAAAGTTTGCCATACCTaGACTTTGGGCAGATGCTCTGACTTGGTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: NSYRHSKKVCHT*TLGRCSDLVPW
Trigger: CCAGGGGACCAAGTCAGAGCATCTGCCCAAAGTTCAGGTATGGCAAACTTTCTTACTGTGTCTATAGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475905.5
CDS CCA 72 bp CTCCTTCAGGCTCATATAAACTATTGGCTGACACCGTaGAGGGTAAAGATTCTCTTCCATCATCAGAGCTCT +
Preference number: 6 (lower is better)
Translates to: LLQAHINYWLTP*RVKILFHHQSS
Trigger: AGAGCTCTGATGATGGAAGAGAATCTTTACCCTCCACGGTGTCAGCCAATAGTTTATATGAGCCTGAAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000450200.1
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp AAGGGTCTTTCCCTTCTTCATCAGTGGCATGTTGATTaGCACCTCGTTTTAGGAATAAACATACCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: KGLSLLHQWHVD*HLVLGINIPAL
Trigger: CAGGGCAGGTATGTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CAA 90 bp TCGGGCTTTTTCCTGTTCCAAGTTTTGAAGGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATAACTATGCCATTTGCAGCATCTACG +
Preference number: 6 (lower is better)
Translates to: SGFFLFQVLKALLAR*NRYPSITMPFAAST
Trigger: CGTAGATGCTGCAAATGGCATAGTTATGGAAGGATATCTGTTCAAACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGAAAAAGCCCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635383.1
CDS TCA 72 bp CTCAAAGGGTCTTTCCCTTCTTCATCAGTGGCATGTTaGTTGGCACCTCGTTTTAGGAATAAACATACCTGC +
Preference number: 6 (lower is better)
Translates to: LKGSFPSSSVAC*LAPRFRNKHTC
Trigger: GCAGGTATGTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp CAGCTATGCTCAAAGGGTCTTTCCCTTCTTCATCAGTaGCATGTTGATTGGCACCTCGTTTTAGGAATAAAC +
Preference number: 6 (lower is better)
Translates to: QLCSKGLSLLHQ*HVDWHLVLGIN
Trigger: GTTTATTCCTAAAACGAGGTGCCAATCAACATGCCACTGATGAAGAAGGGAAAGACCCTTTGAGCATAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CAA 72 bp CGCCTGTTCCAAGTTTTGAAGGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATAACTATGCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: RLFQVLKALLAR*NRYPSITMPFA
Trigger: TGCAAATGGCATAGTTATGGAAGGATATCTGTTCAAACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000618471.4
CDS TCA 72 bp GAGGGTAAAGATTCTCTTCCATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTTCTGACTGAACTTTGG +
Preference number: 6 (lower is better)
Translates to: EGKDSLPSSELC*IPLSLLLTELW
Trigger: CCAAAGTTCAGTCAGAAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326793.11
ENST00000618471.4
CDS TCA 72 bp GAGGGTAAAGATTCTCTTCCATCATCAGAGCTCTGCTaGATTCCACTGTCATTACTTCTGATACTACGCAGT +
Preference number: 6 (lower is better)
Translates to: EGKDSLPSSELC*IPLSLLLILRS
Trigger: ACTGCGTAGTATCAGAAGTAATGACAGTGGAATTCAGCAGAGCTCTGATGATGGAAGAGAATCTTTACCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450200.1
CDS CAA 72 bp GCACATAATCGAGGGCTATGTGTCGGAAACATTTTCTaGTTGCTGTCAGAATGTTGGTGGCTTCTTCAACTT +
Preference number: 6 (lower is better)
Translates to: AHNRGLCVGNIF*LLSECWWLLQL
Trigger: AAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCGATTATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CAA 72 bp ATTGAAAACCAGCGCCTGTTCCAAGTTTTGAAGGCATaGCTGGCTCGTTTGAACAGATATCCTTCCATAACT +
Preference number: 6 (lower is better)
Translates to: IENQRLFQVLKA*LARLNRYPSIT
Trigger: AGTTATGGAAGGATATCTGTTCAAACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGCGCTGGTTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000439758.3
ENST00000618471.4
CDS CAA 72 bp ATTCTTGCTAAACGTAACAAGGTGACTATATCAGCATaGGCTGCTTCCACAGCTATGCTCAAAGGGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ILAKRNKVTISA*AASTAMLKGSF
Trigger: GAAAGACCCTTTGAGCATAGCTGTGGAAGCAGCCAATGCTGATATAGTCACCTTGTTACGTTTAGCAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000466876.2
ENST00000618471.4
CDS CCA 72 bp TCTCTTTGGACTCATTTCCAGAATCTAGGCTTCCTGTaGATGGAGATGATTTCTTATCCAGCTTCTCTGATT +
Preference number: 6 (lower is better)
Translates to: SLWTHFQNLGFL*MEMISYPASLI
Trigger: AATCAGAGAAGCTGGATAAGAAATCATCTCCATCCACAGGAAGCCTAGATTCTGGAAATGAGTCCAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326793.11
ENST00000484296.1
ENST00000618471.4
ENST00000635383.1
CDS CAA 72 bp CATAATCGAGGGCTATGTGTCGGAAACATTTTCTTGTaGCTGTCAGAATGTTGGTGGCTTCTTCAACTTCAT +
Preference number: 6 (lower is better)
Translates to: HNRGLCVGNIFL*LSECWWLLQLH
Trigger: ATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCGATTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CAA 72 bp TTCCTGTTCCAAGTTTTGAAGGCATTGCTGGCTCGTTaGAACAGATATCCTTCCATAACTATGCCATTTGCA +
Preference number: 6 (lower is better)
Translates to: FLFQVLKALLAR*NRYPSITMPFA
Trigger: TGCAAATGGCATAGTTATGGAAGGATATCTGTTCAAACGAGCCAGCAATGCCTTCAAAACTTGGAACAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635383.1
CDS CAA 90 bp TCTGAAGCACATAATCGAGGGCTATGTGTCGGAAACATTTTCTTGTaGCTGTCAGAATGTTGGTGGCTTCTTCAACTTCATGTTGTTTGT +
Preference number: 6 (lower is better)
Translates to: SEAHNRGLCVGNIFL*LSECWWLLQLHVVC
Trigger: ACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACATAGCCCTCGATTATGTGCTTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CCA 72 bp TGTGTCGGAAACATTTTCTTGTTGCTGTCAGAATGTTaGTGGCTTCTTCAACTTCATGTTGTTTGTTTCTTT +
Preference number: 6 (lower is better)
Translates to: CVGNIFLLLSEC*WLLQLHVVCFF
Trigger: AAAGAAACAAACAACATGAAGTTGAAGAAGCCACCAACATTCTGACAGCAACAAGAAAATGTTTCCGACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000326793.11
ENST00000423531.3
ENST00000439758.3
ENST00000480906.5
ENST00000618471.4
ENST00000635383.1
CDS CAA 72 bp GAATCTTGCTGGAAACGATTTAGTTTCTCTGGATTATaGGATGCCATTTGGGAAAAATCACGAAATATGTCC +
Preference number: 6 (lower is better)
Translates to: ESCWKRFSFSGL*DAIWEKSRNMS
Trigger: GGACATATTTCGTGATTTTTCCCAAATGGCATCCAATAATCCAGAGAAACTAAATCGTTTCCAGCAAGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326793.11
ENST00000472860.1
ENST00000618471.4