RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAN (Homo sapiens)

Ensembl gene IDs: ENSG00000157766

Ensembl transcript IDs: ENST00000352105.11, ENST00000439576.7, ENST00000558207.5, ENST00000558604.1, ENST00000558704.1, ENST00000559004.5, ENST00000560601.4, ENST00000561243.7

Found 1682 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGACCCTTGGAGGGAACCCAACTCCCAGGCAGCGGAGGTCCCTCTaGTGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: GTLGGNPTPRQRRSL*WLSPAGLPSAGGRN
Trigger: GTTCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCCTGGGAGTTGGGTTCCCTCCAAGGGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGCGTCCTGGGTGCGTCCTGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: KRQEEDTVWVGCTSA*QAPGLSVLGASWKL
Trigger: GAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR CCA 90 bp CAGGAAGTGCCCCCAGCAGCCCTGCCGAGTTGCCACCTGTTAGGGTaGCAGACCCAGGTGAGAGAGAGGACACTGAAAGAGGGACCCTTG +
Preference number: 1 (lower is better)
Translates to: QEVPPAALPSCHLLG*QTQVRERTLKEGPL
Trigger: CAAGGGTCCCTCTTTCAGTGTCCTCTCTCTCACCTGGGTCTGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGCTGGGGGCACTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGGGTGCG +
Preference number: 1 (lower is better)
Translates to: LYDKKRQEEDTVWVG*TSAWQAPGLSVLGA
Trigger: CGCACCCAGGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR CCA 90 bp TCCGAGTTCTTCCTGCTCTCAGGCCTCTGCTCCTTCCAGCTCCTTTaGAGCCCTCCTCCCTCCTCCCTAGCTCTCCCTGGAGGTGAAATA +
Preference number: 1 (lower is better)
Translates to: SEFFLLSGLCSFQLL*SPPPSSLALPGGEI
Trigger: TATTTCACCTCCAGGGAGAGCTAGGGAGGAGGGAGGAGGGCTCCAAAGGAGCTGGAAGGAGCAGAGGCCTGAGAGCAGGAAGAACTCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR GCA 90 bp TGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGAACTGTaGAGGATAATACACAAGGCTGAGTTCACGGAGGGTCAGGGGTGG +
Preference number: 1 (lower is better)
Translates to: WGKPAVGLVSKEAEL*RIIHKAEFTEGQGW
Trigger: CCACCCCTGACCCTCCGTGAACTCAGCCTTGTGTATTATCCTGCACAGTTCAGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 90 bp ATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGG +
Preference number: 1 (lower is better)
Translates to: IPYMTKSDKKRTPSG*DARQPGRLLGSASW
Trigger: CCAGGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
3UTR CCA 90 bp TGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTC +
Preference number: 1 (lower is better)
Translates to: WDSLYDKKRQEEDTV*VGCTSAWQAPGLSV
Trigger: GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
3UTR CCA 90 bp AAGCGTGAAGGCAGGATTCATGGGCTGGGGGTAACTGTACTGGTGTaGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGAACTG +
Preference number: 1 (lower is better)
Translates to: KREGRIHGLGVTVLV*GKPAVGLVSKEAEL
Trigger: CAGTTCAGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCCCAGCCCATGAATCCTGCCTTCACGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR GCA 90 bp GCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTaGTTCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCA +
Preference number: 1 (lower is better)
Translates to: AAWLGNFWEVNWLGF*FPEQGRGTGTRASS
Trigger: TGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGAAGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR TCA 90 bp AGGATGGTACTCAATTCCATGAAACCATCTCGGCATTTGAAAGCGTaGAGGCAGGATTCATGGGCTGGGGGTAACTGTACTGGTGTGGGG +
Preference number: 1 (lower is better)
Translates to: RMVLNSMKPSRHLKA*RQDSWAGGNCTGVG
Trigger: CCCCACACCAGTACAGTTACCCCCAGCCCATGAATCCTGCCTTCACGCTTTCAAATGCCGAGATGGTTTCATGGAATTGAGTACCATCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR GCA 90 bp GGAACTCATCCAGAGCCCAGCAATTCCGTGGCTATGCCCTGGCCATaGTTACTATATTGCTTGATGACATCACTCTCAGAAGTCCAGTGG +
Preference number: 1 (lower is better)
Translates to: GTHPEPSNSVAMPWP*LLYCLMTSLSEVQW
Trigger: CCACTGGACTTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCTCTGGATGAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 90 bp TCTGCAGGAACTCATCCAGAGCCCAGCAATTCCGTGGCTATGCCCTaGCCATGCTTACTATATTGCTTGATGACATCACTCTCAGAAGTC +
Preference number: 1 (lower is better)
Translates to: SAGTHPEPSNSVAMP*PCLLYCLMTSLSEV
Trigger: GACTTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCTCTGGATGAGTTCCTGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR GCA 90 bp ATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATaGACCCAGACCCTCCATGGACTCTGCAGGAACTCATCCAGAGCC +
Preference number: 1 (lower is better)
Translates to: IKHGTGCYYNLHSGP*TQTLHGLCRNSSRA
Trigger: GGCTCTGGATGAGTTCCTGCAGAGTCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR TCA 90 bp TCCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTaGAGAAATGTCTCTAAACTCAGTCCAAGGGTTATAATAAGTTTG +
Preference number: 1 (lower is better)
Translates to: SPCPCTGPWKGTMGN*RNVSKLSPRVIISL
Trigger: CAAACTTATTATAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
3UTR CCA 90 bp GTAAACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTaGTCCATGCACCCAGACCCTCCATGGACTCTGCAGGAACTCATC +
Preference number: 1 (lower is better)
Translates to: VNYKTWHRLLLQSTF*SMHPDPPWTLQELI
Trigger: GATGAGTTCCTGCAGAGTCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR TCA 90 bp TGCCAAGGGCACCACGTGCACTTAATTAATTCTTGCAGCTCTCTCTaGAGTAGGAACCATTATATCTCCATTTTCACACAGCTATTAAGT +
Preference number: 1 (lower is better)
Translates to: CQGHHVHLINSCSSL*SRNHYISIFTQLLS
Trigger: ACTTAATAGCTGTGTGAAAATGGAGATATAATGGTTCCTACTTCAGAGAGAGCTGCAAGAATTAATTAAGTGCACGTGGTGCCCTTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 90 bp CAGGAAGTTGCAAAGACACTCAGTTTTGATGTAAACTATAAAACATaGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCCA +
Preference number: 1 (lower is better)
Translates to: QEVAKTLSFDVNYKT*HRLLLQSTFWSMHP
Trigger: TGGGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGTTTACATCAAAACTGAGTGTCTTTGCAACTTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR GCA 90 bp TTCACACAGCTATTAAGTAGCAGAGCCATAACTCAAATTCAGGTCTaGTTCATTTCTAGTAGACATAAATACCAGCTCAAGTTCTTATTT +
Preference number: 1 (lower is better)
Translates to: FTQLLSSRAITQIQV*FISSRHKYQLKFLF
Trigger: AAATAAGAACTTGAGCTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCTGCTACTTAATAGCTGTGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 90 bp GGGTGGCAGACCCAGGTGAGAGAGAGGACACTGAAAGAGGGACCCTaGGAGGGAACCCAACTCCCAGGCAGCGGAGGTCCCTCTGATGGC +
Preference number: 2 (lower is better)
Translates to: GWQTQVRERTLKEGP*EGTQLPGSGGPSDG
Trigger: GCCATCAGAGGGACCTCCGCTGCCTGGGAGTTGGGTTCCCTCCAAGGGTCCCTCTTTCAGTGTCCTCTCTCTCACCTGGGTCTGCCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR CCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCCCTGCACTGGTCCCTaGAAAGGCACGATGGGAAAT +
Preference number: 2 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRPCTGP*KGTMGN
Trigger: ATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGG...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 2 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR-3UTR CCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 2 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR TCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGGGCACGATGGGAAATTaGAGAAATGTCTCTAAACTC +
Preference number: 2 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRGTMGN*RNVSKL
Trigger: GAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCC...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR GCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGGCGGACAAATTAGATaGGGTTTTGCTGATTTGGAG +
Preference number: 2 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGGGQIR*GFADLE
Trigger: CTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR GCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGATAATAAGTTTGCTTTaGTTTGGCATTCGGCGGACA +
Preference number: 2 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEIISLL*FGIRRT
Trigger: TGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTAT...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR GCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAACCCTCCATGGACTCTaGAGGAACTCATCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: RAGKGHWDKSLIKASGRETLHGL*RNSSRA
Trigger: GGCTCTGGATGAGTTCCTGCAGAGTCCATGGAGGGT...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTAGCCCAGCAATTCCGTaGCTATGCCCTGGCCATGCT +
Preference number: 2 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEASPAIP*LCPGHA
Trigger: AGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCT...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGCCTCCCTAGTAGCTaGGATTACAGGTACACACCA +
Preference number: 2 (lower is better)
Translates to: SQSREGALGQEPHQSLWESLPSS*DYRYTP
Trigger: TGGTGTGTACCTGTAATCCCAGCTACTAGGGAGGCT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 90 bp GGGCTGGGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTaGGTCAGCAAGGAAGCTGAACTGTGCAGGATAATACACAAGGCT +
Preference number: 2 (lower is better)
Translates to: GLGVTVLVWGKPAVG*VSKEAELCRIIHKA
Trigger: AGCCTTGTGTATTATCCTGCACAGTTCAGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCCCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR GCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCGTTCCGAGTTCTTCCTaGTCTCAGGCCTCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGVPSSS*SQASAP
Trigger: AGGAGCAGAGGCCTGAGAGCAGGAAGAACTCGGAAC...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR GCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGCTACATTCTGGTCCATaGACCCAGACCCTCCATGGA +
Preference number: 2 (lower is better)
Translates to: AGKGHWDKSLIKASGRELLHSGP*TQTLHG
Trigger: TCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAG...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGAGGATGACCTTGCCTTaGGGTCAAAGCCTGCGTTGT +
Preference number: 2 (lower is better)
Translates to: AGKGHWDKSLIKASGRELRMTLP*GQSLRC
Trigger: ACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCT...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAGTGACCCTGGATGTCTaGGAAACTTGGGGACACTCA +
Preference number: 2 (lower is better)
Translates to: RAGKGHWDKSLIKASGREVTLDV*ETWGHS
Trigger: TGAGTGTCCCCAAGTTTCCCAGACATCCAGGGTCAC...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAGGGGGAAACCAGCAGTaGGCTTGGTCAGCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGGGNQQ*AWSARK
Trigger: CTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCC...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCACCCAGACCCTCCATaGACTCTGCAGGAACTCATC +
Preference number: 2 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAHPDPP*TLQELI
Trigger: GATGAGTTCCTGCAGAGTCCATGGAGGGTCTGGGTG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR GCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGGGAGGGGTGAGTGGGTaGATACACAAATGTGGGATT +
Preference number: 2 (lower is better)
Translates to: PPVPALVPGKARWEIEEMGGVSG*IHKCGI
Trigger: AATCCCACATTTGTGTATGCACCCACTCACCCCTCC...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
3UTR-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAATTCTGGGAGGTTAACTaGCTTGGTTTCTGCTTCCCA +
Preference number: 2 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEFWEVN*LGFCFP
Trigger: TGGGAAGCAGAAACCAAGCCAGTTAACCTCCCAGAA...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 90 bp AGAGCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATaGCTTGATGACATCACTCTCAGAAGTCCAGTGGGGAGTGATGGT +
Preference number: 2 (lower is better)
Translates to: RAQQFRGYALAMLTI*LDDITLRSPVGSDG
Trigger: ACCATCACTCCCCACTGGACTTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR TCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGACTTGACTTATTaGGGCTGGCTGAACTTTGAA +
Preference number: 2 (lower is better)
Translates to: RAGKGHWDKSLIKASGRELDLTY*GWLNFE
Trigger: TTCAAAGTTCAGCCAGCCTCAATAAGTCAAGTCCAA...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 90 bp CCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTaGATGACATCACTCTCAGAAGTCCAGTGGGGAGTGATGGTTGAA +
Preference number: 2 (lower is better)
Translates to: PSNSVAMPWPCLLYC*MTSLSEVQWGVMVE
Trigger: TTCAACCATCACTCCCCACTGGACTTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR TCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAGTGGGGAGTGATGGTTaGAATGGTAGCATATCCATA +
Preference number: 2 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGVGSDG*NGSISI
Trigger: TATGGATATGCTACCATTTCAACCATCACTCCCCAC...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR TCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGCGGCATTTGAAAGCGTaGAGGCAGGATTCATGGGCT +
Preference number: 2 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWRHLKA*RQDSWA
Trigger: AGCCCATGAATCCTGCCTTCACGCTTTCAAATGCCG...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR TCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATCTTGCAGCTCTCTCTaGAGTAGGAACCATTATATC +
Preference number: 2 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGSCSSL*SRNHYI
Trigger: GATATAATGGTTCCTACTTCAGAGAGAGCTGCAAGA...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR GCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAACCATGCTTACTATATTaGTTGATGACATCACTCTCA +
Preference number: 2 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEPCLLY*LMTSLS
Trigger: TGAGAGTGATGTCATCAAGCAATATAGTAAGCATGG...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR GCA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGAGCTATGCCCTGGCCATaGTTACTATATTGCTTGATG +
Preference number: 2 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGAMPWP*LLYCLM
Trigger: CATCAAGCAATATAGTAAGCATGGCCAGGGCATAGC...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR GCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCATAATAAGTTTGCTTTaGTTTGGCATTCGGCGGACA +
Preference number: 2 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCIISLL*FGIRRT
Trigger: TGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTAT...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR CCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGAAGTTTGCTTTGCTTTaGCATTCGGCGGACAAATTA +
Preference number: 2 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLKFALL*HSADKL
Trigger: TAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR-3UTR CCA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGTTACAATCTACATTCTaGTCCATGCACCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVLQSTF*SMHPDP
Trigger: AGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAA...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAGTGGGTGCATACACAAATGTGGGAT +
Preference number: 2 (lower is better)
Translates to: KFALLWHSADKLDAV*LIWRGEWVHTQMWD
Trigger: ATCCCACATTTGTGTATGCACCCACTCACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
3UTR-3UTR GCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTAACTTGAACCACCAGTaGTTAGTGAAGAATAATAGA +
Preference number: 2 (lower is better)
Translates to: WGQHGWEISGRLTGLVSANLNHQ*LVKNNR
Trigger: TCTATTATTCTTCACTAAGCACTGGTGGTTCAAGTT...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTTGGGGGCAGCATGGCTaGGAAATTTCTGGGAGGTTA +
Preference number: 2 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFWGQHG*EISGRL
Trigger: TAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 72 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGCGTCCTGGGTGCGTCC +
Preference number: 3 (lower is better)
Translates to: EEDTVWVGCTSA*QAPGLSVLGAS
Trigger: GGACGCACCCAGGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
3UTR TCA 72 bp GGAGGGAACCCAACTCCCAGGCAGCGGAGGTCCCTCTaGTGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGA +
Preference number: 3 (lower is better)
Translates to: GGNPTPRQRRSL*WLSPAGLPSAG
Trigger: TCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCCTGGGAGTTGGGTTCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR CCA 72 bp CCCCCAGCAGCCCTGCCGAGTTGCCACCTGTTAGGGTaGCAGACCCAGGTGAGAGAGAGGACACTGAAAGAG +
Preference number: 3 (lower is better)
Translates to: PPAALPSCHLLG*QTQVRERTLKE
Trigger: CTCTTTCAGTGTCCTCTCTCTCACCTGGGTCTGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGCTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR GCA 72 bp AAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTC +
Preference number: 3 (lower is better)
Translates to: KKRQEEDTVWVG*TSAWQAPGLSV
Trigger: GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR-3UTR CAA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCAGCAGCCCTGCCGAGTaGCCACCTGTTAGGGTGGCA +
Preference number: 3 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGSSPAE*PPVRVA
Trigger: TGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGCT...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR CCA 72 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCA +
Preference number: 3 (lower is better)
Translates to: MTKSDKKRTPSG*DARQPGRLLGS
Trigger: TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR CCA 72 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGG +
Preference number: 3 (lower is better)
Translates to: LYDKKRQEEDTV*VGCTSAWQAPG
Trigger: CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
3UTR GCA 72 bp CTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTaGTTCCCAGAGCAGGGAAGGGGCACTGGGACAAGA +
Preference number: 3 (lower is better)
Translates to: LGNFWEVNWLGF*FPEQGRGTGTR
Trigger: TCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGAAGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTTTTAGAAGGATGACCTaGCCTTGGGGTCAAAGCCTG +
Preference number: 3 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAFRRMT*PWGQSL
Trigger: CAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAA...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGCAAGCAGGAGAGAATTaGACAAGAGTGTACAAATTA +
Preference number: 3 (lower is better)
Translates to: SQSREGALGQEPHQSLWEQAGEN*TRVYKL
Trigger: TAATTTGTACACTCTTGTCAAATTCTCTCCTGCTTG...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGCCATGCTTACTATATaGCTTGATGACATCACTCTC +
Preference number: 3 (lower is better)
Translates to: AGKGHWDKSLIKASGRELAMLTI*LDDITL
Trigger: GAGAGTGATGTCATCAAGCAATATAGTAAGCATGGC...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCCACTGCTCCTGGCCTaGAATTGGGTTTTAAAAGGT +
Preference number: 3 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAPLLLA*NWVLKG
Trigger: ACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR GCA 72 bp GGCACAGGCTGTTATTACAATCTACATTCTGGTCCATaGACCCAGACCCTCCATGGACTCTGCAGGAACTCA +
Preference number: 3 (lower is better)
Translates to: GTGCYYNLHSGP*TQTLHGLCRNS
Trigger: TGAGTTCCTGCAGAGTCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 72 bp GTACCAGACTCCACGCTCTCAACTACTGAACAACCTTaGGGGACAGGGATTATGTTCCAAGTGTGTCACGAC +
Preference number: 3 (lower is better)
Translates to: VPDSTLSTTEQP*GTGIMFQVCHD
Trigger: GTCGTGACACACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCKLDAV*LIWRGE
Trigger: CTCACCCCTCCAAATCAGCAAAACCGCATCTAATTT...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
3UTR GCA 72 bp CCAGAGCCCAGCAATTCCGTGGCTATGCCCTGGCCATaGTTACTATATTGCTTGATGACATCACTCTCAGAA +
Preference number: 3 (lower is better)
Translates to: PEPSNSVAMPWP*LLYCLMTSLSE
Trigger: TTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 72 bp ACTCATCCAGAGCCCAGCAATTCCGTGGCTATGCCCTaGCCATGCTTACTATATTGCTTGATGACATCACTC +
Preference number: 3 (lower is better)
Translates to: THPEPSNSVAMP*PCLLYCLMTSL
Trigger: GAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCTCTGGATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR TCA 72 bp CTCAATTCCATGAAACCATCTCGGCATTTGAAAGCGTaGAGGCAGGATTCATGGGCTGGGGGTAACTGTACT +
Preference number: 3 (lower is better)
Translates to: LNSMKPSRHLKA*RQDSWAGGNCT
Trigger: AGTACAGTTACCCCCAGCCCATGAATCCTGCCTTCACGCTTTCAAATGCCGAGATGGTTTCATGGAATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CCA 72 bp CATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTaGAGGGGTGAGTGGGTGCATACACAAATGTGGGAT +
Preference number: 3 (lower is better)
Translates to: HSADKLDAVLLI*RGEWVHTQMWD
Trigger: ATCCCACATTTGTGTATGCACCCACTCACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
3UTR CCA 72 bp AAAACATGGCACAGGCTGTTATTACAATCTACATTCTaGTCCATGCACCCAGACCCTCCATGGACTCTGCAG +
Preference number: 3 (lower is better)
Translates to: KTWHRLLLQSTF*SMHPDPPWTLQ
Trigger: CTGCAGAGTCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTAGGTCAACGAAAAACTaGAACCACCAGTGCTTAGTG +
Preference number: 3 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFRSTKN*NHQCLV
Trigger: CACTAAGCACTGGTGGTTCAAGTTTTTCGTTGACCT...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR TCA 72 bp CACCACGTGCACTTAATTAATTCTTGCAGCTCTCTCTaGAGTAGGAACCATTATATCTCCATTTTCACACAG +
Preference number: 3 (lower is better)
Translates to: HHVHLINSCSSL*SRNHYISIFTQ
Trigger: CTGTGTGAAAATGGAGATATAATGGTTCCTACTTCAGAGAGAGCTGCAAGAATTAATTAAGTGCACGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR-3UTR CAA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCTTATTTATCTCTACTaGTCTCTGGGGAACTTTAGA +
Preference number: 3 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFLIYLY*SLGNFR
Trigger: TCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRAHPSS*RRPVRR
Trigger: CCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSAHPSS*RRPVRR
Trigger: CCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASAHPSS*RRPVRR
Trigger: CCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRRAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSRAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCGCGTCCTCAGCTCTaGGAGCCCCCTCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSARPQL*EPPLER
Trigger: CCGCTCCAGAGGGGGCTCGCAGAGCTGAGGACGCGC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGGTCCCCTCGGGCTGTaGCCGCAGCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAGPLGL*PQRQLL
Trigger: CAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGGCCCGGGTCTCGCTaGGTAGCGAGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVRPGSR*VARETL
Trigger: GAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWARAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSRAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGGTCCCCTCGGGCTGTaGCCGCAGCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGGPLGL*PQRQLL
Trigger: CAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSRGSG*RQAWCL
Trigger: GAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVSRGSG*RQAWCL
Trigger: GAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGAGAGAGAGAGACCTTaGGCAGCGCTGCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAERERP*AALRAS
Trigger: GGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLLRCD*CSRHRR
Trigger: GCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGCGCGTCCTCAGCTCTaGGAGCCCCCTCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGARPQL*EPPLER
Trigger: CCGCTCCAGAGGGGGCTCGCAGAGCTGAGGACGCGC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVDRSHA*LVPTAG
Trigger: GCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPGQWV*EARLVR
Trigger: CCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRGRWVC*VHSDSG
Trigger: CCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGPPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEPDRHC*PARALQ
Trigger: CTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRLHTRG*CGCATL
Trigger: GAGGGTGGCACACCCACATCACCCTCTGGTGTGGAG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGAGAGAGAGAGACCTTaGGCAGCGCTGCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGERERP*AALRAS
Trigger: GGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSSRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGCGCAGGCAGGCCTaGTGTGCCTCCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSVRRQA*CASSKV
Trigger: GACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCAC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCTGGCAGCGGGGATGTaGCCACTGGGGTATAGGCTG +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQELAAGM*PLGYRL
Trigger: CAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCTGGCAGCGGGGATGTaGCCACTGGGGTATAGGCTG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSALAAGM*PLGYRL
Trigger: CAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLRCDC*SRHRRS
Trigger: TGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLLRCD*CSRHRR
Trigger: GCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGCGCGTCCTCAGCTCTaGGAGCCCCCTCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLARPQL*EPPLER
Trigger: CCGCTCCAGAGGGGGCTCGCAGAGCTGAGGACGCGC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGACCTTGAGCAGCGCTaGGCGCGTCCTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLDLEQR*ARPQLC
Trigger: GCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAPKVLA*STTGGS
Trigger: AGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTGCACGGAACCCTGGTaGCTGCACGGTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWCTEPW*LHGPGG
Trigger: GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCAGCGGGGACGGTTaGGGGATGCTGACACTCAGC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLSGDG*GMLTLS
Trigger: GCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGCTCAGCGGGGACGGTTaGGGGATGCTGACACTCAGC +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQLSGDG*GMLTLS
Trigger: GCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAG...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEDSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCGGGTTCCAGGGGACTaGGGGAGACCTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQERVPGD*GRPRRW
Trigger: CCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACCCG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLSASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQPGQWV*EARLVR
Trigger: CCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTGGTGGCTCTCCGCTaGGCTCTATCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRLVALR*ALSART
Trigger: AGTCCGGGCTGATAGAGCCCAGCGGAGAGCCACCAG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGGRWVC*VHSDSG
Trigger: CCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTCTGCCCGAAGGTCCTaGCATGCTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSARRS*HAPPQG
Trigger: CCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQCPLG*HRMVGM
Trigger: CATGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVTHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTACTTGCCCTGTCCCCTaGCAGCTGCCCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRTCPVP*QLPTEV
Trigger: GACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGT...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGGTCAGGGACTCCTaGTGTTGCCCCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRQVRDS*CCPTEP
Trigger: GGGTTCAGTGGGGCAACATCAGGAGTCCCTGACCTG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCGGAAGGGAGGCCACTaGGTTCCACAGACCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQERKGGH*VPQTLS
Trigger: GCTTAGGGTCTGTGGAACTCAGTGGCCTCCCTTCCG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSRGSG*RQAWCL
Trigger: GAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGPSCEV*PDRSPL
Trigger: CAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPSCEV*PDRSPL
Trigger: CAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGATGCTGCTCAGGTGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLDAAQV*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCTGCTCCTCGGGGGTaGCGATGCTGCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPAPRG*RCCSGV
Trigger: CACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCATGGGGTGTCCATCTaGCCAGCGGAAGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAHGVSI*PAEVPF
Trigger: GAAGGGGACTTCCGCTGGTCAGATGGACACCCCATG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSGRRGC*ERETLS
Trigger: GCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCAGCGGAGGTCCCTCTaGTGGCTCTCTCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLQRRSL*WLSPAG
Trigger: GCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLGTAVT*TTRSSL
Trigger: CAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQGTAVT*TTRSSL
Trigger: CAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGTGCGCAGGCAGGCCTaGTGTGCCTCCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQVRRQA*CASSKV
Trigger: GACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCAC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGAAGCAGAAGGCATGGTaGCGGGACAGTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRKQKAW*RDSGSG
Trigger: CCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTT...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALRGGR*PEPSFR
Trigger: CCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLRGGR*PEPSFR
Trigger: CCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACCCAGAATCTTCTCTaGTGGCCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASTQNLL*WPQGRQ
Trigger: CTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQAGRWV*WVHSDS
Trigger: AGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGATGGACACTGAAAGGTaGCCGGAGACCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAMDTER*PETLAP
Trigger: GGGTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCAT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGACAAACCCCTCTGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGQTPL*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGGACAAACCCCTCTGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQGQTPL*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCC...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCAGCCCTGCCGAGTTaGCACCTGTTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQAALPS*HLLGWQ
Trigger: CTGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACTCAGCGGGGACGGTTaGGGGATGCTGACACTCAGC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGLSGDG*GMLTLS
Trigger: GCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQDSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCGGGTTCCAGGGGACTaGGGGAGACCTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLRVPGD*GRPRRW
Trigger: CCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACCCG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQSPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGAAAGCCCCAGGGCCTaGTGGCCTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRESPRA*WPLQSH
Trigger: ATGAGACTGGAGAGGCCACCAGGCCCTGGGGCTTTC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGDRSHA*LVPTAG
Trigger: GCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSDRSHA*LVPTAG
Trigger: GCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRGCAH*GIGWFP
Trigger: TGGGAACCAGCCTATACCCCAGTGGGCACATCCCCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGTAGGAAGGATCCCTaGCAGCGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSSRKDP*QRGCAH
Trigger: GTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGAAGCCGTGGGAGTaGCTGAAGGCAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVQKPWE*LKASLV
Trigger: CACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGTGGGTTGCGGAGTCCTaGCTGGCTGAGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEWVAES*LAEGMD
Trigger: GTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCA...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGCAGCGGCAACTGCTaGGTTGCGGAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRSGNC*VAESWL
Trigger: CAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGGGTCCCCTCGGGCTGTaGCCGCAGCGGCAACTGCTG +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWEGPLGL*PQRQLL
Trigger: CAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACC...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCAGTCCCACACACCTaGCGAGGCAGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSVPHT*RGSWGL
Trigger: GAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTCTGCCCGAAGGTCCTaGCATGCTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQSARRS*HAPPQG
Trigger: CCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGATGGTGGGCATGTaGCGCTGGACAAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRMVGM*RWTNPS
Trigger: AGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGCTGGCACCGGATGGTaGGCATGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLAGTGW*ACGAGQ
Trigger: TTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSWAGTG*WACGAG
Trigger: TCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAWAGTG*WACGAG
Trigger: TCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGWAGTG*WACGAG
Trigger: TCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWQCPLG*HRMVGM
Trigger: CATGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAPPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGPDRHC*PARALQ
Trigger: CTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSPDRHC*PARALQ
Trigger: CTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSARVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCAGGTCAGGGACTCCTaGTGTTGCCCCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLQVRDS*CCPTEP
Trigger: GGGTTCAGTGGGGCAACATCAGGAGTCCCTGACCTG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGAAGGGAGGCCACTaGGTTCCACAGACCCTAAGC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQRKGGH*VPQTLS
Trigger: GCTTAGGGTCTGTGGAACTCAGTGGCCTCCCTTCCG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLPSCEV*PDRSPL
Trigger: CAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGATGCTGCTCAGGTGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGDAAQV*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCCTGCTCCTCGGGGGTaGCGATGCTGCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWPAPRG*RCCSGV
Trigger: CACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACATGGGGTGTCCATCTaGCCAGCGGAAGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGHGVSI*PAEVPF
Trigger: GAAGGGGACTTCCGCTGGTCAGATGGACACCCCATG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGAGAGAGAGAGACCTTaGGCAGCGCTGCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLERERP*AALRAS
Trigger: GGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCTGTGCAGGTGATCTaGGGCTCCTCCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSVQVI*GSSQCP
Trigger: CGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCTGTGCAGGTGATCTaGGGCTCCTCCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASVQVI*GSSQCP
Trigger: CGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTGCGCAGGCAGGCCTaGTGTGCCTCCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSVRRQA*CASSKV
Trigger: GACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCAC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGCAGCGGGGATGTaGCCACTGGGGTATAGGCTG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLAAGM*PLGYRL
Trigger: CAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLRGGR*PEPSFR
Trigger: CCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCCAGAATCTTCTCTaGTGGCCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLTQNLL*WPQGRQ
Trigger: CTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGAGRWV*WVHSDS
Trigger: AGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGG +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELAHPSS*RRPVRR
Trigger: CCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGC...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGPKVLA*STTGGS
Trigger: AGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASYRSFF*PKVLAC
Trigger: GCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGACAAACCCCTCTGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQGQTPL*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGCTGCTCTCAGGCCTCTaGTCCTTCCAGCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQLLSGL*SFQLLW
Trigger: CCAAAGGAGCTGGAAGGAGCAGAGGCCTGAGAGCAG...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCAGCGGGGACGGTTaGGGGATGCTGACACTCAGC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALSGDG*GMLTLS
Trigger: GCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSDSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGGGTTCCAGGGGACTaGGGGAGACCTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRVPGD*GRPRRW
Trigger: CCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACCCG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLLVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCACTGCTCAAGGCGTGTaGCGAAGAACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSTAQGV*RRTPPP
Trigger: AGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGRGCAH*GIGWFP
Trigger: TGGGAACCAGCCTATACCCCAGTGGGCACATCCCCG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATTCCTCCCCAGAGCTaGGCAGCTCAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLIPPQS*AAQSSW
Trigger: CCAGCTGGACTGAGCTGCCCAGCTCTGGGGAGGAAT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTGGTGGCTCTCCGCTaGGCTCTATCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLVALR*ALSART
Trigger: AGTCCGGGCTGATAGAGCCCAGCGGAGAGCCACCAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGTGGCTCTCCGCTaGGCTCTATCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLVALR*ALSART
Trigger: AGTCCGGGCTGATAGAGCCCAGCGGAGAGCCACCAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCAGAATCTTCTCTGCTaGCCTCAGGGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASQNLLC*PQGRQM
Trigger: CATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTTCTCCACTCACTTCTaGGGCAGCGGACGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGFSTHF*GSGRLA
Trigger: GGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGTCTCCAGAAGCCGTaGGAGTGGCTGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSACLQKP*EWLKAS
Trigger: GCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGRWVC*VHSDSG
Trigger: CCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGVSAGR*VCWVHS
Trigger: TGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGAC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSVSAGR*VCWVHS
Trigger: TGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGAC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGAGAAGCTGGGATaGAAGCATCTGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVPEKLG*KHLLGR
Trigger: CCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCGGAGAAGCTGGGATaGAAGCATCTGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPEKLG*KHLLGR
Trigger: CCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCGCAGCGGCAACTGCTaGGTTGCGGAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWRSGNC*VAESWL
Trigger: CAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTCAGTCCCACACACCTaGCGAGGCAGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWSVPHT*RGSWGL
Trigger: GAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGTGGGCATGTGGCGCTaGACAAACCCCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGVGMWR*TNPSVH
Trigger: GTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGGCATCCACGCAGGTaGCTCCATTCAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAWHPRR*LHSDKG
Trigger: GCCCTTGTCTGAATGGAGCCACCTGCGTGGATGCCA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSTVGGC*HSASCH
Trigger: ATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSTHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGGCAGTAGTCTCCCCTaGGGGTACAGCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGGSSLP*GYSSCL
Trigger: GAGACAACTGCTGTACCCTCAGGGGAGACTACTGCC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTACTTGCCCTGTCCCCTaGCAGCTGCCCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWATCPVP*QLPTEV
Trigger: GACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAACTTGCCCTGTCCCCTaGCAGCTGCCCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSTCPVP*QLPTEV
Trigger: GACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGAAGGAAGCCCACTaGGGTCAGTCCCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRQKEAH*GQSLLQ
Trigger: CTGAAGTAGGGACTGACCTCAGTGGGCTTCCTTCTG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVFLLHH*CQWFPS
Trigger: GGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAA...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGTTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEFLLHH*CQWFPS
Trigger: GGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAA...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSFLLHH*CQWFPS
Trigger: GGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAA...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTGAAGGCTGCCCACTaGGATCAGGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLKAAH*DQGPQM
Trigger: CATCTGGGGTCCCTGATCTCAGTGGGCAGCCTTCAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTGATGTTGCCCCACTaGACCCTGGTAACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLMLPH*TLVTLK
Trigger: CTTCAGGGTTACCAGGGTTCAGTGGGGCAACATCAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGATGTTGCCCCACTaGACCCTGGTAACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLMLPH*TLVTLK
Trigger: CTTCAGGGTTACCAGGGTTCAGTGGGGCAACATCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCGGAAGGGAGGCCACTaGGTTCCACAGACCCTAAGC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGRKGGH*VPQTLS
Trigger: GCTTAGGGTCTGTGGAACTCAGTGGCCTCCCTTCCG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGGAAGGGAGGCCACTaGGTTCCACAGACCCTAAGC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRKGGH*VPQTLS
Trigger: GCTTAGGGTCTGTGGAACTCAGTGGCCTCCCTTCCG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAHPRFA*QICLSG
Trigger: TCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRHPRFA*QICLSG
Trigger: TCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACTTGGTAGGCCACTaGATTCCGGAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVHLVGH*IPESGM
Trigger: CATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAAACTTCTGGAAGTCCTaGGGCCTCTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGNFWKS*GLSTGA
Trigger: GGCACCAGTGGAGAGGCCTCAGGACTTCCAGAAGTT...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSADASPS*NVKVLP
Trigger: CGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACATGGGGTGTCCATCTaGCCAGCGGAAGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSHGVSI*PAEVPF
Trigger: GAAGGGGACTTCCGCTGGTCAGATGGACACCCCATG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAGRRGC*ERETLS
Trigger: GCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGGGCACAGGCATATaGCGTGTCCCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSGGTGI*RVPLSP
Trigger: AGGAGACAGAGGGACACGTCATATGCCTGTGCCCCC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTCTGTGCAGGTGATCTaGGGCTCCTCCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLSVQVI*GSSQCP
Trigger: CGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGA...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSRWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRRWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWGTAVT*TTRSSL
Trigger: CAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGTAVT*TTRSSL
Trigger: CAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQTLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTAAGCAGAAGGCATGGTaGCGGGACAGTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAKQKAW*RDSGSG
Trigger: CCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSRVMWV*HPLLLL
Trigger: CAGGAGAAGAAGAGGGTGGCACACCCACATCACCCT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGACTTTCCTCTGTTGCTaGGCCAGTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSATFLCC*ASGRPS
Trigger: ACTTGGCCTCCCACTGGCGCAGCAACAGAGGAAAGT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGTACTTTCCTCTGTTaGTGCGCCAGTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSCTFLC*CASGRP
Trigger: TGGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACA...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLSPDS*PLKSRC
Trigger: ACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQELSPDS*PLKSRC
Trigger: ACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRLSPDS*PLKSRC
Trigger: ACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTTCCAGTTCACTTaGAGTGGAGGCTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPFQFT*SGGCDH
Trigger: GTGGTCACAGCCTCCACTGCAAGTGAACTGGAAGGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCCTTCCAGTTCACTTaGAGTGGAGGCTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPFQFT*SGGCDH
Trigger: GTGGTCACAGCCTCCACTGCAAGTGAACTGGAAGGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSTAII*SRGQAA
Trigger: AGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRSTAII*SRGQAA
Trigger: AGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGA...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASTAII*SRGQAA
Trigger: AGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTATCAGCCCGGACTaGAGCCCACTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASISPD*SPLRSR
Trigger: TCTGGACCTAAGTGGGCTGCAGTCCGGGCTGATAGA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTCTATCAGCCCGGACTaGAGCCCACTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSISPD*SPLRSR
Trigger: TCTGGACCTAAGTGGGCTGCAGTCCGGGCTGATAGA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGGCCTCTCCACTGGTaGCCATGGCTACAGAGGATT +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVRPLHW*PWLQRI
Trigger: AATCCTCTGTAGCCATGGGCACCAGTGGAGAGGCCT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGACCCAGAATCTTCTCTaGTGGCCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGTQNLL*WPQGRQ
Trigger: CTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLAGRWV*WVHSDS
Trigger: AGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQALLRCD*CSRHRR
Trigger: GCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLLRCD*CSRHRR
Trigger: GCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCACTCGCCCTTCTCGTaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAHSPFS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCACGAGAAGGGCGAGTG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGACCTTGAGCAGCGCTaGGCGCGTCCTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRDLEQR*ARPQLC
Trigger: GCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTC...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGACAAACCCCTCTGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGQTPL*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGGTTCCGAGTTCTTCCTaGTCTCAGGCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAEVPLMALSCRLTLGRRVPSSS*SQASAP
Trigger: AGGAGCAGAGGCCTGAGAGCAGGAAGAACTCGGAAC...CCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCTGCACGGAACCCTGGTaGCTGCACGGTCCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGCTEPW*LHGPGG
Trigger: GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCA...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGGTAGAGCTGGCCCGTaGTGGCCAGCCGGGCACCCA +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEGRAGP*WPAGHP
Trigger: TGGGTGCCCGGCTGGCCACCACGGGCCAGCTCTACC...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGGCCAGGTCACTGTCTaGACGGTGATGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQGQVTV*TVMSSS
Trigger: TGAGGAGGACATCACCGTCCAGACAGTGACCTGGCC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGAAAGCCCCAGGGCCTaGTGGCCTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSESPRA*WPLQSH
Trigger: ATGAGACTGGAGAGGCCACCAGGCCCTGGGGCTTTC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGTCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWESASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACTGCTCAAGGCGTGTaGCGAAGAACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQTAQGV*RRTPPP
Trigger: AGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRDRSHA*LVPTAG
Trigger: GCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTC...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASHQRVM*VCHPLL
Trigger: AAGAAGAGGGTGGCACACCCACATCACCCTCTGGTG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCACACCAGGAACCACTTaGGTCACGATCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSTPGTT*VTIHSS
Trigger: GGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGTAGGAAGGATCCCTaGCAGCGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGSRKDP*QRGCAH
Trigger: GTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTAGTAGGAAGGATCCCTaGCAGCGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASRKDP*QRGCAH
Trigger: GTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAATTCCTCCCCAGAGCTaGGCAGCTCAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSIPPQS*AAQSSW
Trigger: CCAGCTGGACTGAGCTGCCCAGCTCTGGGGAGGAAT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTGAGGCCTCTCCACTaGTGCCCATGGCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLRPLH*CPWLQR
Trigger: CCTCTGTAGCCATGGGCACCAGTGGAGAGGCCTCAG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGAGGCCTCTCCACTaGTGCCCATGGCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLRPLH*CPWLQR
Trigger: CCTCTGTAGCCATGGGCACCAGTGGAGAGGCCTCAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTGAGGCCTCTCCACTaGTGCCCATGGCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALRPLH*CPWLQR
Trigger: CCTCTGTAGCCATGGGCACCAGTGGAGAGGCCTCAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGACCCAGGGAGCACTaGGGTAGCTCCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVRPREH*GSSTNV
Trigger: GACATTAGTGGAGCTACCCCAGTGCTCCCTGGGTCT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTTCTCCACTCACTTCTaGGGCAGCGGACGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLFSTHF*GSGRLA
Trigger: GGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTTCTCCACTCACTTCTaGGGCAGCGGACGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPFSTHF*GSGRLA
Trigger: GGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRLSPHH*WWWILH
Trigger: GTGGAGAATCCACCACCACCAGTGATGTGGGGACAG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCAGAAGCCGTGGGAGTaGCTGAAGGCAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSQKPWE*LKASLV
Trigger: CACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTGTCTCCAGAAGCCGTaGGAGTGGCTGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLCLQKP*EWLKAS
Trigger: GCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACA...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGPLRL*DAGADD
Trigger: GTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASGPLRL*DAGADD
Trigger: GTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWVSAGR*VCWVHS
Trigger: TGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGAC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGGCTGGCTGAGGGAATaGACACTGAAAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGGWLRE*TLKGAR
Trigger: CCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGTGGGCATGTGGCGCTaGACAAACCCCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAVGMWR*TNPSVH
Trigger: GTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGGATGGTGGGCATGTaGCGCTGGACAAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWARMVGM*RWTNPS
Trigger: AGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGGCACCGGATGGTaGGCATGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLAGTGW*ACGAGQ
Trigger: TTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLTVGGC*HSASCH
Trigger: ATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPTHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLHTRG*CGCATL
Trigger: GAGGGTGGCACACCCACATCACCCTCTGGTGTGGAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGGCAGTAGTCTCCCCTaGGGGTACAGCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGGSSLP*GYSSCL
Trigger: GAGACAACTGCTGTACCCTCAGGGGAGACTACTGCC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGCAGTAGTCTCCCCTaGGGGTACAGCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGSSLP*GYSSCL
Trigger: GAGACAACTGCTGTACCCTCAGGGGAGACTACTGCC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLTAAH*SQGVLK
Trigger: TTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSALTAAH*SQGVLK
Trigger: TTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGAAGGCAACCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGQKATH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGGTTGCCTTCTG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQFLLHH*CQWFPS
Trigger: GGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGCTGATGGCTGTCCACTaGCACCAAAGAGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQLMAVH*HQRVQV
Trigger: TACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAG...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTGATGGCTGTCCACTaGCACCAAAGAGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLMAVH*HQRVQV
Trigger: TACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQSVRKP*WLSTDT
Trigger: GGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAAGGCTGCCCACTaGGATCAGGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLLKAAH*DQGPQM
Trigger: CATCTGGGGTCCCTGATCTCAGTGGGCAGCCTTCAG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCAACTTCTGGAAGTCCTaGGGCCTCTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSNFWKS*GLSTGA
Trigger: GGCACCAGTGGAGAGGCCTCAGGACTTCCAGAAGTT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGACAGGTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQQTGLR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTTGGGCATTGTTGTTaGCAAACTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLGHCC*QTPAPR
Trigger: CCGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSATAPGN*SHTGPS
Trigger: AGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRTAPGN*SHTGPS
Trigger: AGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGT...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGRESRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTAAGCAGAAGGCATGGTaGCGGGACAGTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPKQKAW*RDSGSG
Trigger: CCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTT...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAACTTTCCTCTGTTGCTaGGCCAGTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGTFLCC*ASGRPS
Trigger: ACTTGGCCTCCCACTGGCGCAGCAACAGAGGAAAGT...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGGTAACCCTGAAGGCTaGCCACTGAGATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSGNPEG*PLRSGT
Trigger: GGTCCCTGATCTCAGTGGGCAGCCTTCAGGGTTACC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACCATCCCAGATTTaGCTGACAGATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPPSQI*LTDLPL
Trigger: GAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCAGACATGTCTGGTaGTCCAGAATGAGCACCACT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPRHVW*SRMSTT
Trigger: AGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVEMSKC*RSLLGQ
Trigger: CTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASDSISR*VSAGRW
Trigger: CCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTTGTTGACAAACTCCTaGTCCTCGGGGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRLLTNS*SSGVTM
Trigger: CATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGGRSGN*WVAESW
Trigger: CCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSYRSFF*PKVLAC
Trigger: GCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASASVV*VCRWWG
Trigger: ACCCCACCACCTACAAACGCAGACTACAGAAGCGGA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQADSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWEPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLRPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLRAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCCAGGTCACTGTCTaGACGGTGATGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSGQVTV*TVMSSS
Trigger: TGAGGAGGACATCACCGTCCAGACAGTGACCTGGCC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGCCAGGTCACTGTCTaGACGGTGATGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGQVTV*TVMSSS
Trigger: TGAGGAGGACATCACCGTCCAGACAGTGACCTGGCC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTACTGCTCAAGGCGTGTaGCGAAGAACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWATAQGV*RRTPPP
Trigger: AGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWRKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLRGCAH*GIGWFP
Trigger: TGGGAACCAGCCTATACCCCAGTGGGCACATCCCCG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPRGCAH*GIGWFP
Trigger: TGGGAACCAGCCTATACCCCAGTGGGCACATCCCCG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTGGTGGCTCTCCGCTaGGCTCTATCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQALVALR*ALSART
Trigger: AGTCCGGGCTGATAGAGCCCAGCGGAGAGCCACCAG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGATATGGAGTACCTGGTaGCTCTCCGCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQIWSTW*LSAGLY
Trigger: ATAGAGCCCAGCGGAGAGCCACCAGGTACTCCATAT...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGATATGGAGTACCTGGTaGCTCTCCGCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAIWSTW*LSAGLY
Trigger: ATAGAGCCCAGCGGAGAGCCACCAGGTACTCCATAT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAAAATATGGAGTACCTaGTGGCTCTCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVKIWST*WLSAGL
Trigger: GAGCCCAGCGGAGAGCCACCAGGTACTCCATATTTT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTGAGGCCTCTCCACTaGTGCCCATGGCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLRPLH*CPWLQR
Trigger: CCTCTGTAGCCATGGGCACCAGTGGAGAGGCCTCAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGGACTCAAAAAGCTaGGGTGTGTGTGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLDSKS*GVCVTG
Trigger: CCCTGTGACACACACACCCCAGCTTTTTGAGTCCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGAATCTTCTCTGCTaGCCTCAGGGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQNLLC*PQGRQM
Trigger: CATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAATCTTCTCTGCTaGCCTCAGGGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAQNLLC*PQGRQM
Trigger: CATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCAGAATCTTCTCTGCTaGCCTCAGGGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSQNLLC*PQGRQM
Trigger: CATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCGTGGAATGCAGAGGTaGTTTCACTCAGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSRGMQR*FHSDQG
Trigger: CCCCTGATCTGAGTGAAACCACCTCTGCATTCCACG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSPHHW*WWILHS
Trigger: TGAGTGGAGAATCCACCACCACCAGTGATGTGGGGA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLSPHH*WWWILH
Trigger: GTGGAGAATCCACCACCACCAGTGATGTGGGGACAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGTCTCCAGAAGCCGTaGGAGTGGCTGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWACLQKP*EWLKAS
Trigger: GCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRHLLGR*LFRLCE
Trigger: CTCACACAGTCGAAACAGCCACCTCCCCAACAGATG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCCATTCCGGAGAAGCTaGGATGGAAGCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASPFRRS*DGSICW
Trigger: CCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGCTGGCTGAGGGAATaGACACTGAAAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWGWLRE*TLKGAR
Trigger: CCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGCAGCGGCAACTGCTaGGTTGCGGAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRRSGNC*VAESWL
Trigger: CAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGCCTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMPPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGG...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSTVGGC*HSASCH
Trigger: ATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWETHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLRVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGAAGGAAGCCCACTaGGGTCAGTCCCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQKEAH*GQSLLQ
Trigger: CTGAAGTAGGGACTGACCTCAGTGGGCTTCCTTCTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASTEFSS*RESTSS
Trigger: AGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGATGGCTGTCCACTaGCACCAAAGAGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLMAVH*HQRVQV
Trigger: TACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGSVRKP*WLSTDT
Trigger: GGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTGAAGGCTGCCCACTaGGATCAGGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLKAAH*DQGPQM
Trigger: CATCTGGGGTCCCTGATCTCAGTGGGCAGCCTTCAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTGATGTTGCCCCACTaGACCCTGGTAACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLMLPH*TLVTLK
Trigger: CTTCAGGGTTACCAGGGTTCAGTGGGGCAACATCAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCGGAAGGGAGGCCACTaGGTTCCACAGACCCTAAGC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGRKGGH*VPQTLS
Trigger: GCTTAGGGTCTGTGGAACTCAGTGGCCTCCCTTCCG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACACTTGGTAGGCCACTaGATTCCGGAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSHLVGH*IPESGM
Trigger: CATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAACTTCTGGAAGTCCTaGGGCCTCTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLNFWKS*GLSTGA
Trigger: GGCACCAGTGGAGAGGCCTCAGGACTTCCAGAAGTT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSDASPS*NVKVLP
Trigger: CGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWADASPS*NVKVLP
Trigger: CGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACAGACAGGTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSQTGLR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGATGCTGCTCAGGTGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRDAAQV*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCCTGCTCCTCGGGGGTaGCGATGCTGCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGPAPRG*RCCSGV
Trigger: CACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACTTGGGCATTGTTGTTaGCAAACTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGLGHCC*QTPAPR
Trigger: CCGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEGRRGC*ERETLS
Trigger: GCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCC...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGCTGATTTGGAGGGGTaGGTGGGTGCATACACAAAT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRADLEG*VGAYTN
Trigger: ATTTGTGTATGCACCCACTCACCCCTCCAAATCAGC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGGTGGCAGGATCCGGTaGACCCAGTGGGGTCCTCTC +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEGGRIR*TQWGPL
Trigger: GAGAGGACCCCACTGGGTTCACCGGATCCTGCCACC...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLTLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGSWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAAGGAACCGCTGAAATaGCTCGGAAGCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASKEPLK*LGSRRH
Trigger: ATGCCTTCTGCTTCCGAGGCATTTCAGCGGTTCCTT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSRVMWV*HPLLLL
Trigger: CAGGAGAAGAAGAGGGTGGCACACCCACATCACCCT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGACTTTCCTCTGTTGCTaGGCCAGTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGTFLCC*ASGRPS
Trigger: ACTTGGCCTCCCACTGGCGCAGCAACAGAGGAAAGT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGTACTTTCCTCTGTTaGTGCGCCAGTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWACTFLC*CASGRP
Trigger: TGGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLSPDS*PLKSRC
Trigger: ACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTTCCAGAAGGCAGTTTaGCCAAGTCCAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRFQKAV*PSPSLQ
Trigger: CTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAA...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTTCCAGAAGGCAGTTTaGCCAAGTCCAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASFQKAV*PSPSLQ
Trigger: CTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACCACCATCCCAGATTTaGCTGACAGATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGPPSQI*LTDLPL
Trigger: GAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASTAII*SRGQAA
Trigger: AGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAGAAGGCCCTTCTCCTaGCTCTTGGGCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLRRPFS*LLGCWS
Trigger: GCTCCAACAGCCCAAGAGGCAGGAGAAGGGCCTTCT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGAAGGCCCTTCTCCTaGCTCTTGGGCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLRRPFS*LLGCWS
Trigger: GCTCCAACAGCCCAAGAGGCAGGAGAAGGGCCTTCT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCAGGCCTCTCCACTGGTaGCCATGGCTACAGAGGATT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSRPLHW*PWLQRI
Trigger: AATCCTCTGTAGCCATGGGCACCAGTGGAGAGGCCT...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGEMSKC*RSLLGQ
Trigger: CTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQEMSKC*RSLLGQ
Trigger: CTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLDSISR*VSAGRW
Trigger: CCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACACTCGCCCTTCTCGTaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSHSPFS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCACGAGAAGGGCGAGTG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGACCTTGAGCAGCGCTaGGCGCGTCCTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLADLEQR*ARPQLC
Trigger: GCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTTCTCCCCCTGTCCCTaGACTGGTCCCTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAFSPCP*TGPWKG
Trigger: GCCTTTCCAGGGACCAGTGCAGGGACAGGGGGAGAA...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGSWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWELVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGAACTCCAGTGCTTCCTaGAAGGTGAACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQENSSAS*KVNCSR
Trigger: CCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTT...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAPGQWV*EARLVR
Trigger: CCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQARKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAHQRVM*VCHPLL
Trigger: AAGAAGAGGGTGGCACACCCACATCACCCTCTGGTG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTTCTCCACTAATACCTaGTTGTCCAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVFSTNT*LSRGQP
Trigger: GGGCTGTCCTCTGGACAACCAGGTATTAGTGGAGAA...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTTCTCCACTAATACCTaGTTGTCCAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASFSTNT*LSRGQP
Trigger: GGGCTGTCCTCTGGACAACCAGGTATTAGTGGAGAA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTGCCTCTTGGGCTGTTaGAGCCTGGGTTACAGATTC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQCLLGC*SLGYRF
Trigger: GAATCTGTAACCCAGGCTCCAACAGCCCAAGAGGCA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTCCCCAGACATGTCTaGTGCTCCAGAATGAGCACC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLPRHV*CSRMST
Trigger: GGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATATGGAGTACCTGGTaGCTCTCCGCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLIWSTW*LSAGLY
Trigger: ATAGAGCCCAGCGGAGAGCCACCAGGTACTCCATAT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTGAGGCCTCTCCACTaGTGCCCATGGCTACAGAGG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLRPLH*CPWLQR
Trigger: CCTCTGTAGCCATGGGCACCAGTGGAGAGGCCTCAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGGACTCAAAAAGCTaGGGTGTGTGTGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLDSKS*GVCVTG
Trigger: CCCTGTGACACACACACCCCAGCTTTTTGAGTCCAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGACCCAGGGAGCACTaGGGTAGCTCCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRPREH*GSSTNV
Trigger: GACATTAGTGGAGCTACCCCAGTGCTCCCTGGGTCT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCATCACTGGTGGTGGTaGATTCTCCACTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASHHWWW*ILHSLL
Trigger: CAGAAGTGAGTGGAGAATCCACCACCACCAGTGATG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGCCACATCACTGGTGGTaGTGGATTCTCCACTCACTT +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEPHHWW*WILHSL
Trigger: AAGTGAGTGGAGAATCCACCACCACCAGTGATGTGG...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCCACATCACTGGTGGTaGTGGATTCTCCACTCACTT +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSPHHWW*WILHSL
Trigger: AAGTGAGTGGAGAATCCACCACCACCAGTGATGTGG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQSPHHW*WWILHS
Trigger: TGAGTGGAGAATCCACCACCACCAGTGATGTGGGGA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGAAGCCGTGGGAGTaGCTGAAGGCAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAQKPWE*LKASLV
Trigger: CACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGGRWVC*VHSDSG
Trigger: CCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGHLLGR*LFRLCE
Trigger: CTCACACAGTCGAAACAGCCACCTCCCCAACAGATG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGAC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLDGSIC*GGGCFD
Trigger: GTCGAAACAGCCACCTCCCCAACAGATGCTTCCATC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCGGAGAAGCTGGGATaGAAGCATCTGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLPEKLG*KHLLGR
Trigger: CCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCCATTCCGGAGAAGCTaGGATGGAAGCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLPFRRS*DGSICW
Trigger: CCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAAAAAGTTGTCAGGCTaGTTGGGGCGCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSKKLSG*LGRQFS
Trigger: TGAGAACTGGCGCCCCAACCAGCCTGACAACTTTTT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAACGCAGCGGCAACTGCTaGGTTGCGGAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGRERSGNC*VAESWL
Trigger: CAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCG...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAATCAGTCCCACACACCTaGCGAGGCAGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKESVPHT*RGSWGL
Trigger: GAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGA...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSNPSVH*YRTREL
Trigger: CAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCCTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCPPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGGTCATAGTTCACCTTaGAGAGTTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRGHSSP*RVGLPS
Trigger: AGAAGGGAGTCCAACTCTTCAAGGTGAACTATGACC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGACGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRRVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGAGAAGGAACCGCTaGAATGCCTCGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGWRRNR*NASEAE
Trigger: TTCTGCTTCCGAGGCATTTCAGCGGTTCCTTCTCCA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTGGAGAAGGAACCGCTaGAATGCCTCGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGWRRNR*NASEAE
Trigger: TTCTGCTTCCGAGGCATTTCAGCGGTTCCTTCTCCA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGGAGAAGGAACCGCTaGAATGCCTCGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAWRRNR*NASEAE
Trigger: TTCTGCTTCCGAGGCATTTCAGCGGTTCCTTCTCCA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALHTRG*CGCATL
Trigger: GAGGGTGGCACACCCACATCACCCTCTGGTGTGGAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLTAAH*SQGVLK
Trigger: TTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGCTGAAGGAAGTTCACTaGCATCCTCTATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQLKEVH*HPLFQR
Trigger: CCTCTGGAATAGAGGATGTCAGTGAACTTCCTTCAG...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCAGAAGGAAGCCCACTaGGGTCAGTCCCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPQKEAH*GQSLLQ
Trigger: CTGAAGTAGGGACTGACCTCAGTGGGCTTCCTTCTG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGAAGGCAACCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAQKATH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGGTTGCCTTCTG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGATGGCTGTCCACTaGCACCAAAGAGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGLMAVH*HQRVQV
Trigger: TACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLSVRKP*WLSTDT
Trigger: GGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGAAGGCTGCCCACTaGGATCAGGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRLKAAH*DQGPQM
Trigger: CATCTGGGGTCCCTGATCTCAGTGGGCAGCCTTCAG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCAACTTCTGGAAGTCCTaGGGCCTCTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGNFWKS*GLSTGA
Trigger: GGCACCAGTGGAGAGGCCTCAGGACTTCCAGAAGTT...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLDASPS*NVKVLP
Trigger: CGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCAGACAGGTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPQTGLR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLAVSTV*VSSPEY
Trigger: GTACTCAGGAGAAGAGACTCACACAGTCGAAACAGC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCAGCGGAGGTCCCTCTaGTGGCTCTCTCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLQRRSL*WLSPAG
Trigger: GCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTG...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWRWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPSRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSASRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWSWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGTTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGGAACCGCTGAAATaGCTCGGAAGCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLKEPLK*LGSRRH
Trigger: ATGCCTTCTGCTTCCGAGGCATTTCAGCGGTTCCTT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCTGGCAGCGGGGATGTaGCCACTGGGGTATAGGCTG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGLAAGM*PLGYRL
Trigger: CAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAGGGCACTTCAGTTaGAGAAGGGCCTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLRGHFS*RRAFCT
Trigger: AGTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCAGAAGATTCACCGCTaGCACTCGTGGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLQKIHR*HSWYQK
Trigger: TTTCTGGTACCACGAGTGGCAGCGGTGAATCTTCTG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCACCATCCCAGATTTaGCTGACAGATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPPSQI*LTDLPL
Trigger: GAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCAGAAGGCCCTTCTCCTaGCTCTTGGGCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGRRPFS*LLGCWS
Trigger: GCTCCAACAGCCCAAGAGGCAGGAGAAGGGCCTTCT...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCCAGACATGTCTGGTaGTCCAGAATGAGCACCACT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPRHVW*SRMSTT
Trigger: AGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTAGGCCTCTCCACTGGTaGCCATGGCTACAGAGGATT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPRPLHW*PWLQRI
Trigger: AATCCTCTGTAGCCATGGGCACCAGTGGAGAGGCCT...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAGGCCTCTCCACTGGTaGCCATGGCTACAGAGGATT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLRPLHW*PWLQRI
Trigger: AATCCTCTGTAGCCATGGGCACCAGTGGAGAGGCCT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTTAGCTTCGTGGAATaGAGAGGTGGTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSVSFVE*RGGFTQ
Trigger: CTGAGTGAAACCACCTCTGCATTCCACGAAGCTAAC...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGLEMSK*CRSLLG
Trigger: GCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCT +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGAGRWV*WVHSDS
Trigger: AGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGDSISR*VSAGRW
Trigger: CCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSDSISR*VSAGRW
Trigger: CCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGDSISR*VSAGRW
Trigger: CCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGTTGACAAACTCCTaGTCCTCGGGGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLLTNS*SSGVTM
Trigger: CATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSASVV*VCRWWL
Trigger: CAGCCACCACCTACAAACGCAGACTACAGAAGCGGA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352105.11
CDS-3UTR GCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGCTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCGRSGN*WVAESW
Trigger: CCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGGRSGN*WVAESW
Trigger: CCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCC...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTAGGCCCGGGTCTCGCTaGGTAGCGAGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPRPGSR*VARETL
Trigger: GAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCCAATACATTCAGCTaGGGTTCCGAGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSNTFS*GSEFFL
Trigger: CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGCTCAGCGGGGACGGTTaGGGGATGCTGACACTCAGC +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELLSGDG*GMLTLS
Trigger: GCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAG...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCATGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGTTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWELERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLRPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCGGGTTCCAGGGGACTaGGGGAGACCTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGRVPGD*GRPRRW
Trigger: CCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACCCG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAACGGGTTCCAGGGGACTaGGGGAGACCTCGAAGATGG +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKERVPGD*GRPRRW
Trigger: CCATCTTCGAGGTCTCCCCCAGTCCCCTGGAACCCG...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCTCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGSASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAAACTCCAGTGCTTCCTaGAAGGTGAACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGNSSAS*KVNCSR
Trigger: CCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTT...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWHQRVM*VCHPLL
Trigger: AAGAAGAGGGTGGCACACCCACATCACCCTCTGGTG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAGTAGGAAGGATCCCTaGCAGCGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSRKDP*QRGCAH
Trigger: GTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLNSGV*DVNPLE
Trigger: TTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASLNSGV*DVNPLE
Trigger: TTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGATGGGCTGTTGGAGCCTaGGTTACAGATTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGWAVGA*VTDSTK
Trigger: TTTGGTGGAATCTGTAACCCAGGCTCCAACAGCCCA...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTGGGCTGTTGGAGCCTaGGTTACAGATTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQWAVGA*VTDSTK
Trigger: TTTGGTGGAATCTGTAACCCAGGCTCCAACAGCCCA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCCTCTTGGGCTGTTaGAGCCTGGGTTACAGATTC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSCLLGC*SLGYRF
Trigger: GAATCTGTAACCCAGGCTCCAACAGCCCAAGAGGCA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGCCTCTTGGGCTGTTaGAGCCTGGGTTACAGATTC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWACLLGC*SLGYRF
Trigger: GAATCTGTAACCCAGGCTCCAACAGCCCAAGAGGCA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTCCCCAGACATGTCTaGTGCTCCAGAATGAGCACC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLPRHV*CSRMST
Trigger: GGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAATATGGAGTACCTGGTaGCTCTCCGCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSIWSTW*LSAGLY
Trigger: ATAGAGCCCAGCGGAGAGCCACCAGGTACTCCATAT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCATCCCCACTAAAATATaGAGTACCTGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSIPTKI*STWWLS
Trigger: GGAGAGCCACCAGGTACTCCATATTTTAGTGGGGAT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTCCACTTACATTGGTaGTGCTGGCAAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLHLHW*CWQNPH
Trigger: GTGGGGATTTTGCCAGCACCACCAATGTAAGTGGAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGTGGAATGCAGAGGTaGTTTCACTCAGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGRGMQR*FHSDQG
Trigger: CCCCTGATCTGAGTGAAACCACCTCTGCATTCCACG...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACGTGGAATGCAGAGGTaGTTTCACTCAGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRGMQR*FHSDQG
Trigger: CCCCTGATCTGAGTGAAACCACCTCTGCATTCCACG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMGRWVC*VHSDSG
Trigger: CCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCC...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAVSAGR*VCWVHS
Trigger: TGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGAC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAHLLGR*LFRLCE
Trigger: CTCACACAGTCGAAACAGCCACCTCCCCAACAGATG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGAC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWADGSIC*GGGCFD
Trigger: GTCGAAACAGCCACCTCCCCAACAGATGCTTCCATC...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGAGTTCTCAAATTGCATaGGGTGTCCATCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASSQIA*GVHLTS
Trigger: GCTGGTCAGATGGACACCCCATGCAATTTGAGAACT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTTGCGGAGTCCTGGCTaGCTGAGGGAATGGACACTG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQALRSPG*LREWTL
Trigger: CAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAA...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGTGGGTTGCGGAGTCCTaGCTGGCTGAGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRWVAES*LAEGMD
Trigger: GTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCA...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGTGGGCATGTGGCGCTaGACAAACCCCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRVGMWR*TNPSVH
Trigger: GTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCQCPLG*HRMVGM
Trigger: CATGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTTCCCTCATACAGATaGTGTAGCCCTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAFPSYR*CSPPGS
Trigger: GGAGCCAGGAGGGCTACACCATCTGTATGAGGGAAA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGGTCATAGTTCACCTTaGAGAGTTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLGHSSP*RVGLPS
Trigger: AGAAGGGAGTCCAACTCTTCAAGGTGAACTATGACC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWETVGGC*HSASCH
Trigger: ATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGAAGTCAAGGTGTCCTaGAACATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGEVKVS*NISTAC
Trigger: ACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGAAGGAAGTTCACTaGCATCCTCTATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLKEVH*HPLFQR
Trigger: CCTCTGGAATAGAGGATGTCAGTGAACTTCCTTCAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCAGAAGGAAGCCCACTaGGGTCAGTCCCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGQKEAH*GQSLLQ
Trigger: CTGAAGTAGGGACTGACCTCAGTGGGCTTCCTTCTG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCAAGTCTCCAGAAGCTaGCCCCACCAAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSQVSRS*PHQVFF
Trigger: AAAGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAAGTCTCCAGAAGCTaGCCCCACCAAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQVSRS*PHQVFF
Trigger: AAAGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGTEFSS*RESTSS
Trigger: AGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGAAAACTGTCCACTaGCATCCACCATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQQKTVH*HPPSQI
Trigger: AATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRQNEHH*VLKCQK
Trigger: CTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTCTGGTGCTCCAGAATaGGCACCACTGAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQSGAPE*APLSSK
Trigger: TTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGA...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQADASPS*NVKVLP
Trigger: CGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSASRGSG*RQAWCL
Trigger: GAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTG +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPPSCEV*PDRSPL
Trigger: CAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSAVSTV*VSSPEY
Trigger: GTACTCAGGAGAAGAGACTCACACAGTCGAAACAGC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCCTGCTCCTCGGGGGTaGCGATGCTGCTCAGGTGTG +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPPAPRG*RCCSGV
Trigger: CACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGCPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTGAGAGAGAGAGACCTTaGGCAGCGCTGCGCGCGTCC +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAERERP*AALRAS
Trigger: GGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTC...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAACAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGAAGGAACCGCTGAAATaGCTCGGAAGCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGKEPLK*LGSRRH
Trigger: ATGCCTTCTGCTTCCGAGGCATTTCAGCGGTTCCTT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGAGGGCACTTCAGTTaGAGAAGGGCCTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGRGHFS*RRAFCT
Trigger: AGTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTCCAGAAGGCAGTTTaGCCAAGTCCAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAFQKAV*PSPSLQ
Trigger: CTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLLVSGA*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGATCAGGAGACCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGIRRPR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGAT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGAAGATTCACCGCTaGCACTCGTGGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQKIHR*HSWYQK
Trigger: TTTCTGGTACCACGAGTGGCAGCGGTGAATCTTCTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCCACCATCCCAGATTTaGCTGACAGATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWPPSQI*LTDLPL
Trigger: GAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCCCAGACATGTCTGGTaGTCCAGAATGAGCACCACT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWPRHVW*SRMSTT
Trigger: AGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCCAGACATGTCTGGTaGTCCAGAATGAGCACCACT +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLPRHVW*SRMSTT
Trigger: AGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTATCAGCCCGGACTaGAGCCCACTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGSISPD*SPLRSR
Trigger: TCTGGACCTAAGTGGGCTGCAGTCCGGGCTGATAGA...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGTTAGCTTCGTGGAATaGAGAGGTGGTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLVSFVE*RGGFTQ
Trigger: CTGAGTGAAACCACCTCTGCATTCCACGAAGCTAAC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPEMSKC*RSLLGQ
Trigger: CTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLEMSK*CRSLLG
Trigger: GCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALEMSK*CRSLLG
Trigger: GCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTTGTTGACAAACTCCTaGTCCTCGGGGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLLLTNS*SSGVTM
Trigger: CATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAA...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCGGCTCCTCCGAGGGTaGCGTGAGCTCCGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCRLLRG*RELRFC
Trigger: ACAGAAGCGGAGCTCACGGCACCCTCGGAGGAGCCG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGGAGGGGTGAGTGGGTaGATACACAAATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSGGVSG*IHKCGI
Trigger: AATCCCACATTTGTGTATGCACCCACTCACCCCTCC...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGACCTTGAGCAGCGCTaGGCGCGTCCTCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCDLEQR*ARPQLC
Trigger: GCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAATGGACACTGAAAGGTaGCCGGAGACCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEMDTER*PETLAP
Trigger: GGGTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCAT...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCATTCTCCCCCTGTCCCTaGACTGGTCCCTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAFSPCP*TGPWKG
Trigger: GCCTTTCCAGGGACCAGTGCAGGGACAGGGGGAGAA...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGWRHWG*PGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCA...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWERPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGATCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGSLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLASPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGACTGCTCAAGGCGTGTaGCGAAGAACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRTAQGV*RRTPPP
Trigger: AGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAACTCCAGTGCTTCCTaGAAGGTGAACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGNSSAS*KVNCSR
Trigger: CCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCDRSHA*LVPTAG
Trigger: GCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCACACCAGGAACCACTTaGGTCACGATCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGTPGTT*VTIHSS
Trigger: GGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGT...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGAGTTGGGAATCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASWESR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGATTCCCAACT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAGTTGGGAATCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSSWESR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGATTCCCAACT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTGGGCTGTTGGAGCCTaGGTTACAGATTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAWAVGA*VTDSTK
Trigger: TTTGGTGGAATCTGTAACCCAGGCTCCAACAGCCCA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTGCCTCTTGGGCTGTTaGAGCCTGGGTTACAGATTC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLCLLGC*SLGYRF
Trigger: GAATCTGTAACCCAGGCTCCAACAGCCCAAGAGGCA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTCCCCAGACATGTCTaGTGCTCCAGAATGAGCACC +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLPRHV*CSRMST
Trigger: GGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGAAAATATGGAGTACCTaGTGGCTCTCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLKIWST*WLSAGL
Trigger: GAGCCCAGCGGAGAGCCACCAGGTACTCCATATTTT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGATCCCCACTAAAATATaGAGTACCTGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQIPTKI*STWWLS
Trigger: GGAGAGCCACCAGGTACTCCATATTTTAGTGGGGAT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTCCACTTACATTGGTaGTGCTGGCAAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLHLHW*CWQNPH
Trigger: GTGGGGATTTTGCCAGCACCACCAATGTAAGTGGAG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGATTCTCCACTTACATTaGTGGTGCTGGCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAILHLH*WCWQNP
Trigger: GGGATTTTGCCAGCACCACCAATGTAAGTGGAGAAT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTAGACCCAGGGAGCACTaGGGTAGCTCCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQARPREH*GSSTNV
Trigger: GACATTAGTGGAGCTACCCCAGTGCTCCCTGGGTCT...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSPHHW*WWILHS
Trigger: TGAGTGGAGAATCCACCACCACCAGTGATGTGGGGA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCCATTCCGGAGAAGCTaGGATGGAAGCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPPFRRS*DGSICW
Trigger: CCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGTCTGCGTTTGTAGGTaGTGGCTGTGCCCTTTTTAC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGVCVCR*WLCPFY
Trigger: GTAAAAAGGGCACAGCCACCACCTACAAACGCAGAC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352105.11
CDS-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGGCTGGCTGAGGGAATaGACACTGAAAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEGWLRE*TLKGAR
Trigger: CCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCC...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGTGGGCATGTGGCGCTaGACAAACCCCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGVGMWR*TNPSVH
Trigger: GTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCWAGTG*WACGAG
Trigger: TCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCA...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCAGTGCCCGCTGGGCTaGCACCGGATGGTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSQCPLG*HRMVGM
Trigger: CATGCCCACCATCCGGTGCCAGCCCAGCGGGCACTG...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCCCAGTGCCCGCTaGGCTGGCACCGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQPPSAR*AGTGWW
Trigger: CCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLARVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCAGTAGTCTCCCCTaGGGGTACAGCAGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAGSSLP*GYSSCL
Trigger: GAGACAACTGCTGTACCCTCAGGGGAGACTACTGCC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGAAGTCAAGGTGTCCTaGAACATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLEVKVS*NISTAC
Trigger: ACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGAAGTCAAGGTGTCCTaGAACATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWEVKVS*NISTAC
Trigger: ACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGLTAAH*SQGVLK
Trigger: TTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCACTTGCCCTGTCCCCTaGCAGCTGCCCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGTCPVP*QLPTEV
Trigger: GACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGT...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTGAAGGAAGTTCACTaGCATCCTCTATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALKEVH*HPLFQR
Trigger: CCTCTGGAATAGAGGATGTCAGTGAACTTCCTTCAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRHPRFA*QICLSG
Trigger: TCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPAVSTV*VSSPEY
Trigger: GTACTCAGGAGAAGAGACTCACACAGTCGAAACAGC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLAVSTV*VSSPEY
Trigger: GTACTCAGGAGAAGAGACTCACACAGTCGAAACAGC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCGATGCTGCTCAGGTGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSADAAQV*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATC...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWCPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGATTTGGAGGGGTaGGTGGGTGCATACACAAAT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLADLEG*VGAYTN
Trigger: ATTTGTGTATGCACCCACTCACCCCTCCAAATCAGC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGGCACGATGGGAAATTaGAGAAATGTCTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVGTMGN*RNVSKL
Trigger: GAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGATGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLLLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARSRPGG*HRSWAG
Trigger: CCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGA...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLATLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTAGAGGGCACTTCAGTTaGAGAAGGGCCTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPRGHFS*RRAFCT
Trigger: AGTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCT...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTTCCAGAAGGCAGTTTaGCCAAGTCCAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLFQKAV*PSPSLQ
Trigger: CTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLVSGA*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGATCAGGAGACCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLIRRPR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGAT...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGTAACCCTGAAGGCTaGCCACTGAGATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAGNPEG*PLRSGT
Trigger: GGTCCCTGATCTCAGTGGGCAGCCTTCAGGGTTACC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSTAII*SRGQAA
Trigger: AGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGA...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCCAGAAATCCAGAATaGTCCCCAGACATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASRNPE*SPDMSG
Trigger: ACCAGACATGTCTGGGGAGCATTCTGGATTTCTGGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGEMSKC*RSLLGQ
Trigger: CTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTC...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLEMSK*CRSLLG
Trigger: GCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPLRCDC*SRHRRS
Trigger: TGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGAGGGGTGAGTGGGTaGATACACAAATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWGGVSG*IHKCGI
Trigger: AATCCCACATTTGTGTATGCACCCACTCACCCCTCC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGAGGCCCGGGTCTCGCTaGGTAGCGAGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQRPGSR*VARETL
Trigger: GAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLPKVLA*STTGGS
Trigger: AGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGG...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQASASVV*VCRWWG
Trigger: ACCCCACCACCTACAAACGCAGACTACAGAAGCGGA...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCAACCAACGATTGCACTaGTCTTGGATAAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSNQRLH*SWIKSG
Trigger: TCCTGACTTTATCCAAGAGCAGTGCAATCGTTGGTT...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCTGATGGCTCTCTCCTaGCGGCTTACCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCLMALS*RLTLGR
Trigger: CCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAACCTTCCCGGGGAGTGTaGATGGGGTATCTGACAGTC +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREPSRGV*MGYLTV
Trigger: GACTGTCAGATACCCCATCCACACTCCCCGGGAAGG...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGGCCAGGTCACTGTCTaGACGGTGATGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELGQVTV*TVMSSS
Trigger: TGAGGAGGACATCACCGTCCAGACAGTGACCTGGCC...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGACTGCTCAAGGCGTGTaGCGAAGAACACCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELTAQGV*RRTPPP
Trigger: AGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGT...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRHQRVM*VCHPLL
Trigger: AAGAAGAGGGTGGCACACCCACATCACCCTCTGGTG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASGETR*SSTAII
Trigger: TATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSGETR*SSTAII
Trigger: TATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSGETR*SSTAII
Trigger: TATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTAAAATATGGAGTACCTaGTGGCTCTCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAKIWST*WLSAGL
Trigger: GAGCCCAGCGGAGAGCCACCAGGTACTCCATATTTT...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCATTCTCCACTTACATTaGTGGTGCTGGCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLILHLH*WCWQNP
Trigger: GGGATTTTGCCAGCACCACCAATGTAAGTGGAGAAT...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAGACCCAGGGAGCACTaGGGTAGCTCCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRRPREH*GSSTNV
Trigger: GACATTAGTGGAGCTACCCCAGTGCTCCCTGGGTCT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCATCACTGGTGGTGGTaGATTCTCCACTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLHHWWW*ILHSLL
Trigger: CAGAAGTGAGTGGAGAATCCACCACCACCAGTGATG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCCAGAAGCCGTGGGAGTaGCTGAAGGCAAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSQKPWE*LKASLV
Trigger: CACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTG...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCA +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPVSAGR*VCWVHS
Trigger: TGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGAC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGHLLGR*LFRLCE
Trigger: CTCACACAGTCGAAACAGCCACCTCCCCAACAGATG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGTTCTCAAATTGCATaGGGTGTCCATCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGSSQIA*GVHLTS
Trigger: GCTGGTCAGATGGACACCCCATGCAATTTGAGAACT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGAGTTCTCAAATTGCATaGGGTGTCCATCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGSSQIA*GVHLTS
Trigger: GCTGGTCAGATGGACACCCCATGCAATTTGAGAACT...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCCTCTGCACAGGACCTaGCGGGGGCTGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSPLHRT*RGLQQL
Trigger: CAACTGCTGCAGCCCCCGCCAGGTCCTGTGCAGAGG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTTTCCCTCATACAGATaGTGTAGCCCTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAFPSYR*CSPPGS
Trigger: GGAGCCAGGAGGGCTACACCATCTGTATGAGGGAAA...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCATGGCATCCACGCAGGTaGCTCCATTCAGACAAGGGC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAWHPRR*LHSDKG
Trigger: GCCCTTGTCTGAATGGAGCCACCTGCGTGGATGCCA...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGTGGGATACTGGGTGGTaGCAGGATCCGGTGAACCCA +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELWDTGW*QDPVNP
Trigger: TGGGTTCACCGGATCCTGCCACCACCCAGTATCCCA...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAGGATGGGATACTGGGTaGTGGCAGGATCCGGTGAAC +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREGWDTG*WQDPVN
Trigger: GTTCACCGGATCCTGCCACCACCCAGTATCCCATCC...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACTCAGGGGTGGGAGGCTaGGGGCAGCATGGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDSGVGG*GQHGWE
Trigger: TTCCCAGCCATGCTGCCCCCAGCCTCCCACCCCTGA...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAACCAGCAGTGGGCTTaGTCAGCAAGGAAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWENQQWA*SARKLN
Trigger: GTTCAGCTTCCTTGCTGACCAAGCCCACTGCTGGTT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGGGGGGAAACCAGCAGTaGGCTTGGTCAGCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELGGNQQ*AWSARK
Trigger: CTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCC...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSATHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGCTCAGGCGTGGCAATaGTGGCACTGTTCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCAQAWQ*WHCSAG
Trigger: GCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTAGCTCCGGCGAGGCAATaGCCGCCCCCGTGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLAPARQ*PPPCAG
Trigger: GCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAGC...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCACTTGCCCTGTCCCCTaGCAGCTGCCCACTGAAGTC +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSATCPVP*QLPTEV
Trigger: GACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTGAAGGAAGTTCACTaGCATCCTCTATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLKEVH*HPLFQR
Trigger: CCTCTGGAATAGAGGATGTCAGTGAACTTCCTTCAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTGATGTTGCCCCACTaGACCCTGGTAACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALMLPH*TLVTLK
Trigger: CTTCAGGGTTACCAGGGTTCAGTGGGGCAACATCAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGHPRFA*QICLSG
Trigger: TCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCAGAAAACTGTCCACTaGCATCCACCATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWQKTVH*HPPSQI
Trigger: AATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTCTGGTGCTCCAGAATaGGCACCACTGAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLSGAPE*APLSSK
Trigger: TTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCAGACAGGTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGQTGLR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQACPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTGRRGC*ERETLS
Trigger: GCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTCTGTGCAGGTGATCTaGGGCTCCTCCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLSVQVI*GSSQCP
Trigger: CGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGA...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGAAGGCATAAGCATGTaGAAGAGTCGATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWEGISM*KSRWHP
Trigger: TGGATGCCATCGACTCTTTCACATGCTTATGCCTTC...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTTCTACAGTGACAGCTaGAGTGATGACCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPFYSDS*SDDPQS
Trigger: ACTCTGAGGGTCATCACTGCAGCTGTCACTGTAGAA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGAGTGCGCAGGCAGGCCTaGTGTGCCTCCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGVRRQA*CASSKV
Trigger: GACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCAC...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGSWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGA...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLARVMWV*HPLLLL
Trigger: CAGGAGAAGAAGAGGGTGGCACACCCACATCACCCT...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGT +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGLSPDS*PLKSRC
Trigger: ACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCCAGATATTTCTCCTaGACCACTGATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSSRYFS*TTDANG
Trigger: ACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCATCAGGAGACCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGIRRPR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGAT...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCATCTATCAGCCCGGACTaGAGCCCACTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLASISPD*SPLRSR
Trigger: TCTGGACCTAAGTGGGCTGCAGTCCGGGCTGATAGA...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARLRGGR*PEPSFR
Trigger: CCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARLLRCD*CSRHRR
Trigger: GCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSGRSGN*WVAESW
Trigger: CCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGGACAAACCCCTCTGTaGACTGGTACCGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCGQTPL*TGTAPG
Trigger: CCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTTTCTCCCCCTGTCCCTaGACTGGTCCCTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCFSPCP*TGPWKG
Trigger: GCCTTTCCAGGGACCAGTGCAGGGACAGGGGGAGAA...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAACCCTCCATGGACTCTaGAGGAACTCATCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKETLHGL*RNSSRA
Trigger: GGCTCTGGATGAGTTCCTGCAGAGTCCATGGAGGGT...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTTCACCTTGAAGAGTTaGACTCCCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAFTLKS*TPFSKN
Trigger: GTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLDSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGACATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: TPSGWDARQPGRLLGSASEGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQREGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWSLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGTAGCCCGTCTGGTTaGCATGCACGTAGACGGTCC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPGSPSG*HARRRS
Trigger: GGACCGTCTACGTGCATGCCAACCAGACGGGCTACC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGTCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQESKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCRKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAHQRVM*VCHPLL
Trigger: AAGAAGAGGGTGGCACACCCACATCACCCTCTGGTG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCATTCCTCCCCAGAGCTaGGCAGCTCAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAIPPQS*AAQSSW
Trigger: CCAGCTGGACTGAGCTGCCCAGCTCTGGGGAGGAAT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWLNSGV*DVNPLE
Trigger: TTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTCCCCAGACATGTCTaGTGCTCCAGAATGAGCACC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALPRHV*CSRMST
Trigger: GGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTGGTGGCTCTCCGCTaGGCTCTATCAGCCCGGACT +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSLVALR*ALSART
Trigger: AGTCCGGGCTGATAGAGCCCAGCGGAGAGCCACCAG...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCACATCACTGGTGGTaGTGGATTCTCCACTCACTT +
Preference number: 4 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAPHHWW*WILHSL
Trigger: AAGTGAGTGGAGAATCCACCACCACCAGTGATGTGG...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATGGGTTGCGGAGTCCTaGCTGGCTGAGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGWVAES*LAEGMD
Trigger: GTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCA...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTCCTCACATACCTCCTaGTCTATGTTACAGTGCTCG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLSSHTS*SMLQCS
Trigger: CGAGCACTGTAACATAGACCAGGAGGTATGTGAGGA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439576.7
CDS-3UTR CCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTTCTGCCCGAAGGTCCTaGCATGCTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSSARRS*HAPPQG
Trigger: CCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGA...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGAAGTTTGCTTTGCTTTaGCATTCGGCGGACAAATTA +
Preference number: 4 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEKFALL*HSADKL
Trigger: TAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGACAAAAGGGGCTGTTaGAGCCGAAGTGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEDKRGC*SRSEAA
Trigger: TGCAGCCTCACTTCGGCTCCAACAGCCCCTTTTGTC...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGCAACCTCCGCCTCCTaGGTTGAGGTGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAATSAS*VEVILL
Trigger: CAGGAGAATCACCTCAACCCAGGAGGCGGAGGTTGC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGGTCATAGTTCACCTTaGAGAGTTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGGHSSP*RVGLPS
Trigger: AGAAGGGAGTCCAACTCTTCAAGGTGAACTATGACC...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARLHTRG*CGCATL
Trigger: GAGGGTGGCACACCCACATCACCCTCTGGTGTGGAG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCAGAAGGCAACCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAQKATH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGGTTGCCTTCTG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCAGGTCAGGGACTCCTaGTGTTGCCCCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLQVRDS*CCPTEP
Trigger: GGGTTCAGTGGGGCAACATCAGGAGTCCCTGACCTG...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGCACTTGGTAGGCCACTaGATTCCGGAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMHLVGH*IPESGM
Trigger: CATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTG...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPQNEHH*VLKCQK
Trigger: CTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTTTGGCCTAGTTCCTaGGAAATAGTTGGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALWPSS*EIVGSV
Trigger: TACTGAACCAACTATTTCTCAGGAACTAGGCCAAAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSSRGSG*RQAWCL
Trigger: GAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCT...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTGATGCTGCTCAGGTGTaGCTGCTGCTCCCGACACCG +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARDAAQV*LLLPTP
Trigger: CGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATC...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGCGAGATGGCCGGGGTaGTGCTCACGGTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGARWPG*CSRSVQ
Trigger: CTGCACAGACCGTGAGCATCACCCCGGCCATCTCGC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR TCA 90 bp TCCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAACCATCTCGGCATTTaGAAGCGTGAAGGCAGGATT +
Preference number: 4 (lower is better)
Translates to: SQSREGALGQEPHQSLWENHLGI*KREGRI
Trigger: AATCCTGCCTTCACGCTTTCAAATGCCGAGATGGTT...CTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDPRCPR*HASPRS
Trigger: GCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGG...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATTGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGCGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGCCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAG +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEASWKVN*SRRVAK
Trigger: CTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGA...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTCCAGATATTTCTCCTaGACCACTGATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLSRYFS*TTDANG
Trigger: ACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGATAAAGAACTCCAGATaGTTCTCCACTAATACCTGG +
Preference number: 4 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQIKNSR*FSTNTW
Trigger: CCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTAT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCGGTAACCCTGAAGGCTaGCCACTGAGATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCGNPEG*PLRSGT
Trigger: GGTCCCTGATCTCAGTGGGCAGCCTTCAGGGTTACC...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGTTAGCTTCGTGGAATaGAGAGGTGGTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGVSFVE*RGGFTQ
Trigger: CTGAGTGAAACCACCTCTGCATTCCACGAAGCTAAC...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQLRCDC*SRHRRS
Trigger: TGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCTGCTCTCAGGCCTCTaGTCCTTCCAGCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSALLSGL*SFQLLW
Trigger: CCAAAGGAGCTGGAAGGAGCAGAGGCCTGAGAGCAG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGCAGCCCTGCCGAGTTaGCACCTGTTAGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQAALPS*HLLGWQ
Trigger: CTGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAAAAATATAAATAGGTaGACGGAACCCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGKNINR*TEPWCL
Trigger: CAGGCACCAGGGTTCCGTGCACCTATTTATATTTTT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACGTAGGTGGTGGCCTGTaGTCAGCGAGATGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNVGGGL*SARWPG
Trigger: CCCCGGCCATCTCGCTGAGCACAGGCCACCACCTAC...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR GCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGCTTGGGGTCAAAGCCTaGGTTGTGCTGGTTTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELLGVKA*VVLVSE
Trigger: CTCTGAAACCAGCACAACGCAGGCTTTGACCCCAAG...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCTTCACCTTGAAGAGTTaGACTCCCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLFTLKS*TPFSKN
Trigger: GTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAA...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSRPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDSWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGTTGCCACCGCAGTTaGGCCGGGCCTTGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSGCHRS*AGPWRW
Trigger: CCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLSKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATTCAGCGAGTAGCGGGTaGGTCCCGGGCGGTAGTGGA +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDSASSG*VPGGSG
Trigger: TCCACTACCGCCCGGGACCCACCCGCTACTCGCTGA...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAACTCCAGTGCTTCCTaGAAGGTGAACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRNSSAS*KVNCSR
Trigger: CCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDPGQWV*EARLVR
Trigger: CCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSRKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTAGTTGGGAATCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSWESR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGATTCCCAACT...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSGETR*SSTAII
Trigger: TATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCATGCCTCTTGGGCTGTTaGAGCCTGGGTTACAGATTC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLACLLGC*SLGYRF
Trigger: GAATCTGTAACCCAGGCTCCAACAGCCCAAGAGGCA...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCACTTACATTGGTaGTGCTGGCAAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRLHLHW*CWQNPH
Trigger: GTGGGGATTTTGCCAGCACCACCAATGTAAGTGGAG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCATTCTCCACTTACATTaGTGGTGCTGGCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLILHLH*WCWQNP
Trigger: GGGATTTTGCCAGCACCACCAATGTAAGTGGAGAAT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCCTGAGAAATAGTTaGTTCAGTAACACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGFLRNS*FSNTLH
Trigger: GTGGAGGGTGTTACTGAACCAACTATTTCTCAGGAA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTTCCTGAGAAATAGTTaGTTCAGTAACACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGFLRNS*FSNTLH
Trigger: GTGGAGGGTGTTACTGAACCAACTATTTCTCAGGAA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGAC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLADGSIC*GGGCFD
Trigger: GTCGAAACAGCCACCTCCCCAACAGATGCTTCCATC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGAC +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGDGSIC*GGGCFD
Trigger: GTCGAAACAGCCACCTCCCCAACAGATGCTTCCATC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCCATTCCGGAGAAGCTaGGATGGAAGCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGPFRRS*DGSICW
Trigger: CCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTGCCCGAAGGTCCTaGCATGCTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTSARRS*HAPPQG
Trigger: CCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGA...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGCTGGCACCGGATGGTaGGCATGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTAGTGW*ACGAGQ
Trigger: TTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTTGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGWAGTG*WACGAG
Trigger: TCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCA...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCGATTGCACTGCTCTTaGATAAAGTCAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLRLHCS*IKSGNK
Trigger: TTTGTTTCCTGACTTTATCCAAGAGCAGTGCAATCG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTGGCGTCGTAGCGGGATaGGGGGTCGGGGTAGCCCGT +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIGVVAG*GVGVAR
Trigger: ACGGGCTACCCCGACCCCTCATCCCGCTACGACGCC...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSLHTRG*CGCATL
Trigger: GAGGGTGGCACACCCACATCACCCTCTGGTGTGGAG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCAAGTCTCCAGAAGCTaGCCCCACCAAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGQVSRS*PHQVFF
Trigger: AAAGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACC +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSASVRKP*WLSTDT
Trigger: GGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCTGATGTTGCCCCACTaGACCCTGGTAACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSALMLPH*TLVTLK
Trigger: CTTCAGGGTTACCAGGGTTCAGTGGGGCAACATCAG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCAGGTCAGGGACTCCTaGTGTTGCCCCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQQVRDS*CCPTEP
Trigger: GGGTTCAGTGGGGCAACATCAGGAGTCCCTGACCTG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCCTTGGGCATTGTTGTTaGCAAACTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGLGHCC*QTPAPR
Trigger: CCGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAG...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSARWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSARWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGA +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTQAGLL*LLKGQR
Trigger: TCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCTGGCAGCGGGGATGTaGCCACTGGGGTATAGGCTG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDLAAGM*PLGYRL
Trigger: CAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTACTTTCCTCTGTTGCTaGGCCAGTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPTFLCC*ASGRPS
Trigger: ACTTGGCCTCCCACTGGCGCAGCAACAGAGGAAAGT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGACTTTCCTCTGTTGCTaGGCCAGTGGGAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLTFLCC*ASGRPS
Trigger: ACTTGGCCTCCCACTGGCGCAGCAACAGAGGAAAGT...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAAGAGGGCACTTCAGTTaGAGAAGGGCCTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLARGHFS*RRAFCT
Trigger: AGTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCT...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRLVSGA*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCCCTTCCAGTTCACTTaGAGTGGAGGCTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPPFQFT*SGGCDH
Trigger: GTGGTCACAGCCTCCACTGCAAGTGAACTGGAAGGG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTATAAAGAACTCCAGATaGTTCTCCACTAATACCTGG +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAIKNSR*FSTNTW
Trigger: CCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTAT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGTCCAGAAATCCAGAATaGTCCCCAGACATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSRNPE*SPDMSG
Trigger: ACCAGACATGTCTGGGGAGCATTCTGGATTTCTGGA...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTCTATCAGCCCGGACTaGAGCCCACTTAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPSISPD*SPLRSR
Trigger: TCTGGACCTAAGTGGGCTGCAGTCCGGGCTGATAGA...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWLRGGR*PEPSFR
Trigger: CCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGTTAGCTTCGTGGAATaGAGAGGTGGTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRVSFVE*RGGFTQ
Trigger: CTGAGTGAAACCACCTCTGCATTCCACGAAGCTAAC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCLRCDC*SRHRRS
Trigger: TGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAG...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTTGTTGACAAACTCCTaGTCCTCGGGGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSLLTNS*SSGVTM
Trigger: CATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAA...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCACTCGCCCTTCTCGTaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCHSPFS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCACGAGAAGGGCGAGTG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTGTCCCTCTGTCTCCTTaGAGGTCCCAGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARVPLSP*RSQLHR
Trigger: CCTGTGGAGCTGGGACCTGCAAGGAGACAGAGGGAC...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLYRSFF*PKVLAC
Trigger: GCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTA...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWDSWGQ*GGRRGG
Trigger: ACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSPRWRH*GWPGSW
Trigger: CCAACTACCCGGCCATCCCCAGTGACGCCACCTTGG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSARPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGEGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCAGAGCTGGCCCGTGGTaGCCAGCCGGGCACCCAGCC +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTRAGPW*PAGHPA
Trigger: GGCTGGGTGCCCGGCTGGCCACCACGGGCCAGCTCT...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGTCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGSKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGSKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGAAAGCCCCAGGGCCTaGTGGCCTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQESPRA*WPLQSH
Trigger: ATGAGACTGGAGAGGCCACCAGGCCCTGGGGCTTTC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGGAAAGCCCCAGGGCCTaGTGGCCTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVESPRA*WPLQSH
Trigger: ATGAGACTGGAGAGGCCACCAGGCCCTGGGGCTTTC...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCCACATCACTGGTGGTaGTGGATTCTCCACTCACTT +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGPHHWW*WILHSL
Trigger: AAGTGAGTGGAGAATCCACCACCACCAGTGATGTGG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPGPLRL*DAGADD
Trigger: GTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACTCAGTGGGCTGTGCTaGGGCGGCTCCTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQLSGLC*GGSSEG
Trigger: ACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGGCTGGCTGAGGGAATaGACACTGAAAGGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQGWLRE*TLKGAR
Trigger: CCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCGGATGGTGGGCATGTaGCGCTGGACAAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQRMVGM*RWTNPS
Trigger: AGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCTGGCACCGGATGGTaGGCATGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDAGTGW*ACGAGQ
Trigger: TTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGC...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCCCTGCACTGGTCCCTaGAAAGGCACGATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCPCTGP*KGTMGN
Trigger: ATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGATTGCACTGCTCTTaGATAAAGTCAGGAAACAAA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWARLHCS*IKSGNK
Trigger: TTTGTTTCCTGACTTTATCCAAGAGCAGTGCAATCG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCGTCTGCGTTTGTAGGTaGTGGCCTGTGCTCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLVCVCR*WPVLSE
Trigger: CTCGCTGAGCACAGGCCACCACCTACAAACGCAGAC...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR CCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATCCGTGGCTATGCCCTaGCCATGCTTACTATATTGC +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGRESVAMP*PCLLYC
Trigger: GCAATATAGTAAGCATGGCCAGGGCATAGCCACGGA...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGTGACCCTGGATGTCTaGGAAACTTGGGGACACTCA +
Preference number: 4 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAVTLDV*ETWGHS
Trigger: TGAGTGTCCCCAAGTTTCCCAGACATCCAGGGTCAC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGAGCCTCCCTAGTAGCTaGGATTACAGGTACACACCA +
Preference number: 4 (lower is better)
Translates to: AGKGHWDKSLIKASGRELSLPSS*DYRYTP
Trigger: TGGTGTGTACCTGTAATCCCAGCTACTAGGGAGGCT...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTTTCAGGGGCAAACGTaGAGGGCTCCTCGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQFQGQT*RAPRVP
Trigger: TGGAACCCGAGGAGCCCTTCACGTTTGCCCCTGAAA...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACC +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSSVRKP*WLSTDT
Trigger: GGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACT...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACAGGTCAGGGACTCCTaGTGTTGCCCCACTGAACCC +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSQVRDS*CCPTEP
Trigger: GGGTTCAGTGGGGCAACATCAGGAGTCCCTGACCTG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTCATGGGGTGTCCATCTaGCCAGCGGAAGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGHGVSI*PAEVPF
Trigger: GAAGGGGACTTCCGCTGGTCAGATGGACACCCCATG...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTATGGGATTCCTTATATaGCAAAAAGCGACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAMGFLI*QKATRR
Trigger: TCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCAT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCTAPGN*SHTGPS
Trigger: AGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGT...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACCACGGTCTGTGCAGGTaGTCTGAGGCTCCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNHGLCR*SEAPPS
Trigger: ACTGGGAGGAGCCTCAGATCACCTGCACAGACCGTG...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR TCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGATTGGACTTGACTTATTaGGGCTGGCTGAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRLDLTY*GWLNFE
Trigger: TTCAAAGTTCAGCCAGCCTCAATAAGTCAAGTCCAA...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAGATAATACACAAGGCTaGGTTCACGGAGGGTCAGGG +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGDNTQG*VHGGSG
Trigger: CCCTGACCCTCCGTGAACTCAGCCTTGTGTATTATC...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCGGCATTTGAAAGCGTaGAGGCAGGATTCATGGGCT +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSARHLKA*RQDSWA
Trigger: AGCCCATGAATCCTGCCTTCACGCTTTCAAATGCCG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAATGCAGGCAGGCCCGCTaGGCCCTGTCAAAGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQCRQAR*ALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCA...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCGCTGCACATGTCCATaGCAGCCTGCCAGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWRCTCP*QPARPG
Trigger: ACCTGGCCTGGCAGGCTGGCATGGACATGTGCAGCG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCTTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLRVMWV*HPLLLL
Trigger: CAGGAGAAGAAGAGGGTGGCACACCCACATCACCCT...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCATAAAGAACTCCAGATaGTTCTCCACTAATACCTGG +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLIKNSR*FSTNTW
Trigger: CCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTAT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATACCCAGAATCTTCTCTaGTGGCCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDTQNLL*WPQGRQ
Trigger: CTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGT...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTTAGCTTCGTGGAATaGAGAGGTGGTTTCACTCAG +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAVSFVE*RGGFTQ
Trigger: CTGAGTGAAACCACCTCTGCATTCCACGAAGCTAAC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTGTTGACAAACTCCTaGTCCTCGGGGGTGACGATG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSALLTNS*SSGVTM
Trigger: CATCGTCACCCCCGAGGAGCAGGAGTTTGTCAACAA...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTATGGACACTGAAAGGTaGCCGGAGACCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGMDTER*PETLAP
Trigger: GGGTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCAT...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTCCCTCTGTCTCCTTaGAGGTCCCAGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSVPLSP*RSQLHR
Trigger: CCTGTGGAGCTGGGACCTGCAAGGAGACAGAGGGAC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCCATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGATAGGTCCTGACCCCTaGGCTGCTGTCCTTGTCACC +
Preference number: 4 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVIGPDP*AAVLVT
Trigger: GGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTAT...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTTCTCCACTAATACCTaGTTGTCCAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSFSTNT*LSRGQP
Trigger: GGGCTGTCCTCTGGACAACCAGGTATTAGTGGAGAA...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGLNSGV*DVNPLE
Trigger: TTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTAAAATATGGAGTACCTaGTGGCTCTCCGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPKIWST*WLSAGL
Trigger: GAGCCCAGCGGAGAGCCACCAGGTACTCCATATTTT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCTGGACTCAAAAAGCTaGGGTGTGTGTGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSALDSKS*GVCVTG
Trigger: CCCTGTGACACACACACCCCAGCTTTTTGAGTCCAG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCGTGGAATGCAGAGGTaGTTTCACTCAGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSARGMQR*FHSDQG
Trigger: CCCCTGATCTGAGTGAAACCACCTCTGCATTCCACG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGCCACATCACTGGTGGTaGTGGATTCTCCACTCACTT +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMPHHWW*WILHSL
Trigger: AAGTGAGTGGAGAATCCACCACCACCAGTGATGTGG...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTGTCTCCAGAAGCCGTaGGAGTGGCTGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQCLQKP*EWLKAS
Trigger: GCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACA...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCGGAGAAGCTGGGATaGAAGCATCTGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQPEKLG*KHLLGR
Trigger: CCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCCATTCCGGAGAAGCTaGGATGGAAGCATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCPFRRS*DGSICW
Trigger: CCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGTTGCGGAGTCCTGGCTaGCTGAGGGAATGGACACTG +
Preference number: 4 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVLRSPG*LREWTL
Trigger: CAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAA...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTTGGGTTGCGGAGTCCTaGCTGGCTGAGGGAATGGAC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGWVAES*LAEGMD
Trigger: GTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCA...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACCTCTGCACAGGACCTaGCGGGGGCTGCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQPLHRT*RGLQQL
Trigger: CAACTGCTGCAGCCCCCGCCAGGTCCTGTGCAGAGG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGTGGGCATGTGGCGCTaGACAAACCCCTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGVGMWR*TNPSVH
Trigger: GTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTCGGATGGTGGGCATGTaGCGCTGGACAAACCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGRMVGM*RWTNPS
Trigger: AGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCG...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCAAGTTTGCTTTGCTTTaGCATTCGGCGGACAAATTA +
Preference number: 4 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLKFALL*HSADKL
Trigger: TAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACGCAGGGAAGGGGCACTaGGACAAGAGCCTCATCAAA +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDAGKGH*DKSLIK
Trigger: TTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATGGGGGCAGCATGGCTaGGAAATTTCTGGGAGGTTA +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGWGQHG*EISGRL
Trigger: TAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQPDRHC*PARALQ
Trigger: CTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGGGCTTCACCCTCAGTaGTGTTTCGAGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCGLHPQ*CFEAVA
Trigger: TGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGT +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQIVGLC*WAHAIG
Trigger: ACCTATGGCGTGCGCCCATCAACAGAGACCTACGAT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGTGCTTCCTGGAAGGTaGACTGCTCAAGGCGTGTGG +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCVLPGR*TAQGVW
Trigger: CCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCAC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGAGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCAGAAGGAAGCCCACTaGGGTCAGTCCCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTQKEAH*GQSLLQ
Trigger: CTGAAGTAGGGACTGACCTCAGTGGGCTTCCTTCTG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTTTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARFLLHH*CQWFPS
Trigger: GGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAA...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPTEFSS*RESTSS
Trigger: AGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCTGATGGCTGTCCACTaGCACCAAAGAGTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSLMAVH*HQRVQV
Trigger: TACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCACTTGGTAGGCCACTaGATTCCGGAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTHLVGH*IPESGM
Trigger: CATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGQNEHH*VLKCQK
Trigger: CTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTG...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCAACTTCTGGAAGTCCTaGGGCCTCTCCACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCNFWKS*GLSTGA
Trigger: GGCACCAGTGGAGAGGCCTCAGGACTTCCAGAAGTT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTAGCTCTCCCTGGAGGTaGAATAACCAACGATTGCAC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPSSPWR*NNQRLH
Trigger: GTGCAATCGTTGGTTATTTCACCTCCAGGGAGAGCT...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACCTGGCAAATGCGGCTaGCCAGGGACAGCGGTCACC +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLPGKCG*PGTAVT
Trigger: GGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGTGCGCAGGCAGGCCTaGTGTGCCTCCTCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQVRRQA*CASSKV
Trigger: GACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCAC...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTRVMWV*HPLLLL
Trigger: CAGGAGAAGAAGAGGGTGGCACACCCACATCACCCT...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCCCTTCCAGTTCACTTaGAGTGGAGGCTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARPFQFT*SGGCDH
Trigger: GTGGTCACAGCCTCCACTGCAAGTGAACTGGAAGGG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCTCCAGATATTTCTCCTaGACCACTGATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGSRYFS*TTDANG
Trigger: ACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGA...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCATCAGGAGACCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCIRRPR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGAT...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGGTAACCCTGAAGGCTaGCCACTGAGATCAGGGACC +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDGNPEG*PLRSGT
Trigger: GGTCCCTGATCTCAGTGGGCAGCCTTCAGGGTTACC...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCTCCAGAAATCCAGAATaGTCCCCAGACATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGSRNPE*SPDMSG
Trigger: ACCAGACATGTCTGGGGAGCATTCTGGATTTCTGGA...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLLRCDC*SRHRRS
Trigger: TGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAG...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCACTCGCCCTTCTCGTaGCAGATCATCACCACACAG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQHSPFS*QIITTQ
Trigger: CTGTGTGGTGATGATCTGGCACGAGAAGGGCGAGTG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACTTCTCAGTGGGCTGTaGTGGGGCGGCTCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLLLSGL*WGGSSE
Trigger: CTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCAGGCCCGGGTCTCGCTaGGTAGCGAGGGAGACGCTC +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTRPGSR*VARETL
Trigger: GAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCT...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWPKVLA*STTGGS
Trigger: AGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGG...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGC +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSYRSFF*PKVLAC
Trigger: GCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTA...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCTGATGGCTCTCTCCTaGCGGCTTACCCTCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLLMALS*RLTLGR
Trigger: CCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAG...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACTCAAAGCCTGCGTTGTaGTGGTTTCAGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDSKPAL*WFQSWL
Trigger: GAGCCAGCTCTGAAACCAGCACAACGCAGGCTTTGA...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGCACCTGTGTAGCAGATaGCGTCGTAGCGGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWHLCSR*RRSGMR
Trigger: CCTCATCCCGCTACGACGCCATCTGCTACACAGGTG...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGATCCAAAGAAGTTTTCTaGGATGTCCACAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRSKEVF*DVHKVF
Trigger: GAAGACTTTGTGGACATCCCAGAAAACTTCTTTGGA...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGGCCAGGTCACTGTCTaGACGGTGATGTCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDGQVTV*TVMSSS
Trigger: TGAGGAGGACATCACCGTCCAGACAGTGACCTGGCC...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACCCTCAGCGAAGGCAGTaGCCCCTATTTCAGGGGCAA +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNPQRRQ*PLFQGQ
Trigger: TTGCCCCTGAAATAGGGGCCACTGCCTTCGCTGAGG...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCGGGTATCTGACGGTCTaGTCCCGCAGCCAGCCGGCG +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTGYLTV*SRSQPA
Trigger: CGCCGGCTGGCTGCGGGACCAGACCGTCAGATACCC...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTAACTCCAGTGCTTCCTaGAAGGTGAACTGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: WGQHGWEISGRLTGLVSANSSAS*KVNCSR
Trigger: CCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTT...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGACACCAGGAACCACTTaGGTCACGATCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQTPGTT*VTIHSS
Trigger: GGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSGDPDA*PLSSVP
Trigger: AGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCC...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGGCTGTTGGAGCCTaGGTTACAGATTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAWAVGA*VTDSTK
Trigger: TTTGGTGGAATCTGTAACCCAGGCTCCAACAGCCCA...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTATATGGAGTACCTGGTaGCTCTCCGCTGGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSIWSTW*LSAGLY
Trigger: ATAGAGCCCAGCGGAGAGCCACCAGGTACTCCATAT...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCATCCCCACTAAAATATaGAGTACCTGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGIPTKI*STWWLS
Trigger: GGAGAGCCACCAGGTACTCCATATTTTAGTGGGGAT...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCAGAATCTTCTCTGCTaGCCTCAGGGGCGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDQNLLC*PQGRQM
Trigger: CATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTLSPHH*WWWILH
Trigger: GTGGAGAATCCACCACCACCAGTGATGTGGGGACAG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQLSPHH*WWWILH
Trigger: GTGGAGAATCCACCACCACCAGTGATGTGGGGACAG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCTGTCTCCAGAAGCCGTaGGAGTGGCTGAAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCCLQKP*EWLKAS
Trigger: GCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACA...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCAAAAAGTTGTCAGGCTaGTTGGGGCGCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAKKLSG*LGRQFS
Trigger: TGAGAACTGGCGCCCCAACCAGCCTGACAACTTTTT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLGSSSQ*AVLGRL
Trigger: GAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCC...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGTCTGCCCGAAGGTCCTaGCATGCTCCACCACAGGGG +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWSARRS*HAPPQG
Trigger: CCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGA...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGGCTGGCACCGGATGGTaGGCATGTGGCGCTGGACAA +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWAGTGW*ACGAGQ
Trigger: TTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGC...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCAAGTCTCCAGAAGCTaGCCCCACCAAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLQVSRS*PHQVFF
Trigger: AAAGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTG...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLTEFSS*RESTSS
Trigger: AGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGT...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDHPRFA*QICLSG
Trigger: TCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCACTTGGTAGGCCACTaGATTCCGGAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDHLVGH*IPESGM
Trigger: CATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTTCTGGTGCTCCAGAATaGGCACCACTGAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCSGAPE*APLSSK
Trigger: TTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGA...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACTTTGGCCTAGTTCCTaGGAAATAGTTGGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: QKATRRGHRLGGMHVSLALWPSS*EIVGSV
Trigger: TACTGAACCAACTATTTCTCAGGAACTAGGCCAAAG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCTTGGGCATTGTTGTTaGCAAACTCCTGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQLGHCC*QTPAPR
Trigger: CCGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGGGCACAGGCATATaGCGTGTCCCTCTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQGGTGI*RVPLSP
Trigger: AGGAGACAGAGGGACACGTCATATGCCTGTGCCCCC...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCGCTGATTTGGAGGGGTaGGTGGGTGCATACACAAAT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLADLEG*VGAYTN
Trigger: ATTTGTGTATGCACCCACTCACCCCTCCAAATCAGC...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp CCCAGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGACTCACAACAGCTTTATaGGAGAGATATGATTATCTC +
Preference number: 4 (lower is better)
Translates to: PRAGKGHWDKSLIKASGRLTTAL*ERYDYL
Trigger: GAGATAATCATATCTCTCTCATAAAGCTGTTGTGAG...TCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTTCTACAGTGACAGCTaGAGTGATGACCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPFYSDS*SDDPQS
Trigger: ACTCTGAGGGTCATCACTGCAGCTGTCACTGTAGAA...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCCTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSLLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWTLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCAGAGGGCACTTCAGTTaGAGAAGGGCCTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLRGHFS*RRAFCT
Trigger: AGTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCT...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTATCAGGAGACCCAGATaGTTGGCCACTGAGTTCAGT +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSIRRPR*LATEFS
Trigger: ACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGAT...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGAGAAGGCCCTTCTCCTaGCTCTTGGGCTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWRRPFS*LLGCWS
Trigger: GCTCCAACAGCCCAAGAGGCAGGAGAAGGGCCTTCT...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATAGGCCTCTCCACTGGTaGCCATGGCTACAGAGGATT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDRPLHW*PWLQRI
Trigger: AATCCTCTGTAGCCATGGGCACCAGTGGAGAGGCCT...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGATGGACACTGAAAGGTaGCCGGAGACCCTGGCACCC +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWMDTER*PETLAP
Trigger: GGGTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCAT...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGTCCAATACATTCAGCTaGGGTTCCGAGTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLSNTFS*GSEFFL
Trigger: CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGA...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGCTCCACTTGATTCTTaGGGCCAGTGGGGCGGTAGA +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWAPLDS*GQWGGR
Trigger: TCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGC...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTGCCGGGCCTTGGAGATaGGGTAGCGCACGCTGCGGT +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFAGPWR*GSARCG
Trigger: ACCGCAGCGTGCGCTACCCCATCTCCAAGGCCCGGC...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCAGTTGGGCCGGGCCTTaGAGATGGGGTAGCGCACGC +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTSWAGP*RWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACT...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWSPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGGGCCCAGGCCAGGTGTaGGAAAGCCCCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQGPGQV*ESPRAW
Trigger: CCAGGCCCTGGGGCTTTCCCACACCTGGCCTGGGCC...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGCTTGTCACCCACGCATaGGGTCCGGGGGCTCACAAT +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWLVTHA*GPGAHN
Trigger: ATTGTGAGCCCCCGGACCCCATGCGTGGGTGACAAG...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGATTCCTCCCCAGAGCTaGGCAGCTCAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWIPPQS*AAQSSW
Trigger: CCAGCTGGACTGAGCTGCCCAGCTCTGGGGAGGAAT...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAATTCCTCCCCAGAGCTaGGCAGCTCAGTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQIPPQS*AAQSSW
Trigger: CCAGCTGGACTGAGCTGCCCAGCTCTGGGGAGGAAT...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGAGTTGGGAATCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMSWESR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGATTCCCAACT...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATA +
Preference number: 4 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGSGETR*SSTAII
Trigger: TATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACTCCCCAGACATGTCTaGTGCTCCAGAATGAGCACC +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSLPRHV*CSRMST
Trigger: GGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTGGACTCAAAAAGCTaGGGTGTGTGTGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARLDSKS*GVCVTG
Trigger: CCCTGTGACACACACACCCCAGCTTTTTGAGTCCAG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCGTGGAATGCAGAGGTaGTTTCACTCAGATCAGGGG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTRGMQR*FHSDQG
Trigger: CCCCTGATCTGAGTGAAACCACCTCTGCATTCCACG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQSPHHW*WWILHS
Trigger: TGAGTGGAGAATCCACCACCACCAGTGATGTGGGGA...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNGPLRL*DAGADD
Trigger: GTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACC...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGAC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARDGSIC*GGGCFD
Trigger: GTCGAAACAGCCACCTCCCCAACAGATGCTTCCATC...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGTCCTGGGTGCGTCCTaGAAGCTCTTCTCAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQVLGAS*KLFSVG
Trigger: GCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGAC...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACTGGGCTCAGCGTCCTaGGTGCGTCCTGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLLGSAS*VRPGSS
Trigger: AGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGGGATGCACGTCAGCCTaGCAGGCTCCTGGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPGCTSA*QAPGLS
Trigger: GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCC...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGNPSVH*YRTREL
Trigger: CAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTT...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCNPSVH*YRTREL
Trigger: CAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSNPSVH*YRTREL
Trigger: CAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTT...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTGCGTTTGTAGGTGGTaGCCTGTGCTCAGCGAGATG +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNCVCRW*PVLSEM
Trigger: CATCTCGCTGAGCACAGGCCACCACCTACAAACGCA...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGCACCCAGACCCTCCATaGACTCTGCAGGAACTCATC +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWHPDPP*TLQELI
Trigger: GATGAGTTCCTGCAGAGTCCATGGAGGGTCTGGGTG...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATGGCTGGGAAATTTCTaGGAGGTTAACTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGWLGNF*EVNWLG
Trigger: ACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCA...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCGGTCATAGTTCACCTTaGAGAGTTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLGHSSP*RVGLPS
Trigger: AGAAGGGAGTCCAACTCTTCAAGGTGAACTATGACC...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGC +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLRVVGQ*DLVLIG
Trigger: GCCTATCAGGACAAGGTCTCACTGCCCAACTACCCG...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGCCAGCGTAGCATTGTaGGATTCACAGAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTASVAL*DSQNSS
Trigger: ACTGGAGTTCTGTGAATCTCACAATGCTACGCTGGC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATGGAGAAGGAACCGCTaGAATGCCTCGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSWRRNR*NASEAE
Trigger: TTCTGCTTCCGAGGCATTTCAGCGGTTCCTTCTCCA...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGAAGTCAAGGTGTCCTaGAACATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTEVKVS*NISTAC
Trigger: ACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACAGAAGGCAACCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQQKATH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGGTTGCCTTCTG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTAC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQAVSTV*VSSPEY
Trigger: GTACTCAGGAGAAGAGACTCACACAGTCGAAACAGC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARCPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDTAPGN*SHTGPS
Trigger: AGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGT...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPMMALF*RQARCA
Trigger: GGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCAT...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPLLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCCAGCCAGCCGGCGCTaGACATGTCCATGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFPASRR*TCPCQP
Trigger: AGGCTGGCATGGACATGTGCAGCGCCGGCTGGCTGG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTAAGCAGAAGGCATGGTaGCGGGACAGTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIKQKAW*RDSGSG
Trigger: CCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTT...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGTGTACTTTCCTCTGTTaGTGCGCCAGTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWCTFLC*CASGRP
Trigger: TGGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACA...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLLVSGA*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTCCAGATATTTCTCCTaGACCACTGATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPSRYFS*TTDANG
Trigger: ACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGA...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCAGAAGATTCACCGCTaGCACTCGTGGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQQKIHR*HSWYQK
Trigger: TTTCTGGTACCACGAGTGGCAGCGGTGAATCTTCTG...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNSASVV*VCRWWG
Trigger: ACCCCACCACCTACAAACGCAGACTACAGAAGCGGA...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGGGCGGACAAATTAGATaGGGTTTTGCTGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLGGQIR*GFADLE
Trigger: CTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCC...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGAACTGGCTTGGTTTCTaGTTCCCAGAGCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWNWLGF*FPEQGR
Trigger: CCTTCCCTGCTCTGGGAAGCAGAAACCAAGCCAGTT...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGTTCACCTTGAAGAGTTaGACTCCCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PPGSFSSNTFSCGSEFFLFTLKS*TPFSKN
Trigger: GTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAA...CAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGGCACGCGCCCTTCAGTaGCCACCAGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPARALQ*PPAALP
Trigger: AGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGC...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTATCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWDVSRQ*QLHVRP
Trigger: TGGCCTGACATGGAGCTGCCACTGCCTCGAAACATC...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTACCGCAGGCAGGCCTTaGGGTGACGATGGGGTAGCG +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFTAGRP*GDDGVA
Trigger: CGCTACCCCATCGTCACCCCAAGGCCTGCCTGCGGT...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFPGQWV*EARLVR
Trigger: CCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTAGTAGGAAGGATCCCTaGCAGCGGGGATGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLISRKDP*QRGCAH
Trigger: GTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTTCTCCACTAATACCTaGTTGTCCAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQFSTNT*LSRGQP
Trigger: GGGCTGTCCTCTGGACAACCAGGTATTAGTGGAGAA...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCCTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLLNSGV*DVNPLE
Trigger: TTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAG...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGAGACCCAGGGAGCACTaGGGTAGCTCCACTAATGTC +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWRPREH*GSSTNV
Trigger: GACATTAGTGGAGCTACCCCAGTGCTCCCTGGGTCT...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATCCCCACATCACTGGTaGTGGTGGATTCTCCACTCA +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSSPHHW*WWILHS
Trigger: TGAGTGGAGAATCCACCACCACCAGTGATGTGGGGA...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTGAAGAGGACACCGTCTaGGTGGGATGCACGTCAGCC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIEEDTV*VGCTSA
Trigger: GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGTCAGTCCCACACACCTaGCGAGGCAGCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLSVPHT*RGSWGL
Trigger: GAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGA...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACCCTCATCAAAGCCTCTaGGAGAGAATTGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDPHQSL*ERIGLD
Trigger: GTCAAGTCCAATTCTCTCCCAGAGGCTTTGATGAGG...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 72 bp CAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATaGCTTGATGACATCACTCTCAGAAGTCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QFRGYALAMLTI*LDDITLRSPVG
Trigger: CCCCACTGGACTTCTGAGAGTGATGTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGACACACGGCTCCACTTaGTTCTTGGGGCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPTHGST*FLGPVG
Trigger: CCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGT...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGCTGAAGGAAGTTCACTaGCATCCTCTATTCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTLKEVH*HPLFQR
Trigger: CCTCTGGAATAGAGGATGTCAGTGAACTTCCTTCAG...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTCAGAAGGCAACCCACTaGGGTCCTCAGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIQKATH*GPQLQK
Trigger: CTTCTGGAGCTGAGGACCTCAGTGGGTTGCCTTCTG...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCCAAGTCTCCAGAAGCTaGCCCCACCAAGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCQVSRS*PHQVFF
Trigger: AAAGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTG...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSQNEHH*VLKCQK
Trigger: CTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTTCTGGTGCTCCAGAATaGGCACCACTGAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARSGAPE*APLSSK
Trigger: TTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGA...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNCPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGTCTGTGCAGGTGATCTaGGGCTCCTCCCAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLSVQVI*GSSQCP
Trigger: CGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGA...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSLLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFGTAVT*TTRSSL
Trigger: CAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCC...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCAAGGAACCGCTGAAATaGCTCGGAAGCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCKEPLK*LGSRRH
Trigger: ATGCCTTCTGCTTCCGAGGCATTTCAGCGGTTCCTT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGTGTACTTTCCTCTGTTaGTGCGCCAGTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLCTFLC*CASGRP
Trigger: TGGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACA...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATTCCAGAAGGCAGTTTaGCCAAGTCCAAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSFQKAV*PSPSLQ
Trigger: CTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAA...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACCCTTCCAGTTCACTTaGAGTGGAGGCTGTGACCAC +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQPFQFT*SGGCDH
Trigger: GTGGTCACAGCCTCCACTGCAAGTGAACTGGAAGGG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGATAAAGAACTCCAGATaGTTCTCCACTAATACCTGG +
Preference number: 4 (lower is better)
Translates to: PPVPALVPGKARWEIEEMIKNSR*FSTNTW
Trigger: CCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTAT...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCAGAAGATTCACCGCTaGCACTCGTGGTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDQKIHR*HSWYQK
Trigger: TTTCTGGTACCACGAGTGGCAGCGGTGAATCTTCTG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCCACCATCCCAGATTTaGCTGACAGATCTGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWPPSQI*LTDLPL
Trigger: GAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCCAGAAATCCAGAATaGTCCCCAGACATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTSRNPE*SPDMSG
Trigger: ACCAGACATGTCTGGGGAGCATTCTGGATTTCTGGA...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGACCCAGAATCTTCTCTaGTGGCCTCAGGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPTQNLL*WPQGRQ
Trigger: CTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGT...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGACCGTCTGGGTGGGATaGACGTCAGCCTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLTVWVG*TSAWQA
Trigger: AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGT...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTAAAAATATAAATAGGTaGACGGAACCCTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCKNINR*TEPWCL
Trigger: CAGGCACCAGGGTTCCGTGCACCTATTTATATTTTT...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAACCATGCTTACTATATTaGTTGATGACATCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RAGKGHWDKSLIKASGREPCLLY*LMTSLS
Trigger: TGAGAGTGATGTCATCAAGCAATATAGTAAGCATGG...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGCAATTCCGTGGCTATaGCCTGGCCATGCTTACTAT +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWAIPWL*PGHAYY
Trigger: ATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGATTCACCTTGAAGAGTTaGACTCCCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGFTLKS*TPFSKN
Trigger: GTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAA...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLPRLPG*PRCPRC
Trigger: GCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGG...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCACATCATAGGTCTCGTTaGTGTCTCGGATGCCATACG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSHHRSR*CLGCHT
Trigger: CGTATGGCATCCGAGACACCAACGAGACCTATGATG...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTSLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCCGGAAGCAGAAGGCATaGTGCCGGGACAGTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTRKQKA*CRDSGS
Trigger: AGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCG...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAACACCAGGAACCACTTaGGTCACGATCCACTCCTCC +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQTPGTT*VTIHSS
Trigger: GGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGT...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPRGCAH*GIGWFP
Trigger: TGGGAACCAGCCTATACCCCAGTGGGCACATCCCCG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGATCCCCACTAAAATATaGAGTACCTGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTIPTKI*STWWLS
Trigger: GGAGAGCCACCAGGTACTCCATATTTTAGTGGGGAT...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTCCTGAGAAATAGTTaGTTCAGTAACACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAFLRNS*FSNTLH
Trigger: GTGGAGGGTGTTACTGAACCAACTATTTCTCAGGAA...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATCATCACTGGTGGTGGTaGATTCTCCACTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDHHWWW*ILHSLL
Trigger: CAGAAGTGAGTGGAGAATCCACCACCACCAGTGATG...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLLSPHH*WWWILH
Trigger: GTGGAGAATCCACCACCACCAGTGATGTGGGGACAG...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWHLLGR*LFRLCE
Trigger: CTCACACAGTCGAAACAGCCACCTCCCCAACAGATG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCTGCGTTTGTAGGTGGTaGCTGTGCCCTTTTTACACG +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCCVCRW*LCPFYT
Trigger: CGTGTAAAAAGGGCACAGCCACCACCTACAAACGCA...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000352105.11
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGAGGACACCGTCTGGGTaGGATGCACGTCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLRTPSG*DARQPG
Trigger: GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTTGCGGAGTCCTGGCTaGCTGAGGGAATGGACACTG +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLILRSPG*LREWTL
Trigger: CAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAA...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GCCCAGCAATTCCGTGGCTATGCCCTGGCCATGCTTACTATATTGCTTGATGACTTACAATCTACATTCTaGTCCATGCACCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: AQQFRGYALAMLTILLDDLQSTF*SMHPDP
Trigger: AGGGTCTGGGTGCATGGACCAGAATGTAGATTGTAA...GTCATCAAGCAATATAGTAAGCATGGCCAGGGCATAGCCACGGAATTGCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
3UTR CAA 72 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAGTGGGTGCATACACAA +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAV*LIWRGEWVHTQ
Trigger: TTGTGTATGCACCCACTCACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGGTCATAGTTCACCTTaGAGAGTTGGACTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWGHSSP*RVGLPS
Trigger: AGAAGGGAGTCCAACTCTTCAAGGTGAACTATGACC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQPDRHC*PARALQ
Trigger: CTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGG...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGAAGGCTGCCCACTaGGATCAGGGACCCCAGATG +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLLKAAH*DQGPQM
Trigger: CATCTGGGGTCCCTGATCTCAGTGGGCAGCCTTCAG...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTTCTGGTGCTCCAGAATaGGCACCACTGAGTTCTAAA +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGSGAPE*APLSSK
Trigger: TTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGA...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTCAGACAGGTCTCCGCTaGTTTCAGTCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIQTGLR*FQSCLQ
Trigger: CTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTG...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGAAGGCATAAGCATGTaGAAGAGTCGATGGCATCCA +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCEGISM*KSRWHP
Trigger: TGGATGCCATCGACTCTTTCACATGCTTATGCCTTC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560601.4
CDS-3UTR GCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCTTCTACAGTGACAGCTaGAGTGATGACCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCFYSDS*SDDPQS
Trigger: ACTCTGAGGGTCATCACTGCAGCTGTCACTGTAGAA...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACGTTGGTGTCTCGGATaGCATACGTCCTCACACCAG +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLRWCLG*HTSSHQ
Trigger: CTGGTGTGAGGACGTATGGCATCCGAGACACCAACG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTTLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCATTCACAGAACTCCAGTaGTTCCTGGAAGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSFTELQ*FLEGEL
Trigger: CAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAA...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR GCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTATGTACTTTCCTCTGTTaGTGCGCCAGTGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLCTFLC*CASGRP
Trigger: TGGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACA...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGGCTCAGCGTCCTGGGTaGGTCCTGGAAGCTCTTCTC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLAQRPG*VLEALL
Trigger: GAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGC...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGGCGGACAAATTAGATaGGGTTTTGCTGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQGGQIR*GFADLE
Trigger: CTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWSASVV*VCRWWP
Trigger: AGGCCACCACCTACAAACGCAGACTACAGAAGCGGA...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTTGGAGCGCAGGCTCTaGACTTCCAAGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPLERRL*TSKVAS
Trigger: TGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAA...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGGAAAGCCCCAGGGCCTaGTGGCCTCTCCAGTCTCAT +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLESPRA*WPLQSH
Trigger: ATGAGACTGGAGAGGCCACCAGGCCCTGGGGCTTTC...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACATCCCCACTAAAATATaGAGTACCTGGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNIPTKI*STWWLS
Trigger: GGAGAGCCACCAGGTACTCCATATTTTAGTGGGGAT...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIGPLRL*DAGADD
Trigger: GTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACC...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCCGGAGAAGCTGGGATaGAAGCATCTGTTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPPEKLG*KHLLGR
Trigger: CCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACAGTTCTCAAATTGCATaGGGTGTCCATCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNSSQIA*GVHLTS
Trigger: GCTGGTCAGATGGACACCCCATGCAATTTGAGAACT...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCAGTTCTCAAATTGCATaGGGTGTCCATCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCSSQIA*GVHLTS
Trigger: GCTGGTCAGATGGACACCCCATGCAATTTGAGAACT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGAAAAAGTTGTCAGGCTaGTTGGGGCGCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWKKLSG*LGRQFS
Trigger: TGAGAACTGGCGCCCCAACCAGCCTGACAACTTTTT...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCAGGCTGGGGGCAGCATaGCTGGGAAATTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTRLGAA*LGNFWE
Trigger: CTCCCAGAAATTTCCCAGCCATGCTGCCCCCAGCCT...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPTVGGC*HSASCH
Trigger: ATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGT...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGAAGTCAAGGTGTCCTaGAACATCTCCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQEVKVS*NISTAC
Trigger: ACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTC...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCAGAAAACTGTCCACTaGCATCCACCATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWQKTVH*HPPSQI
Trigger: AATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCTTTGGCCTAGTTCCTaGGAAATAGTTGGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARLWPSS*EIVGSV
Trigger: TACTGAACCAACTATTTCTCAGGAACTAGGCCAAAG...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCTGTTGGAGCCGAAGTaGGGCTGCATACCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFLLEPK*GCIPRK
Trigger: CTTCCGAGGTATGCAGCCTCACTTCGGCTCCAACAG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGACACTGCTCATAGCCTaGTTCGTAGGCGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLTLLIA*FVGGLE
Trigger: CTCCAGGCCGCCTACGAAGCAGGCTATGAGCAGTGT...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGAAGCAGAAGGCATGGTaGCGGGACAGTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQKQKAW*RDSGSG
Trigger: CCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTT...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAAGGAACCGCTGAAATaGCTCGGAAGCAGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWKEPLK*LGSRRH
Trigger: ATGCCTTCTGCTTCCGAGGCATTTCAGCGGTTCCTT...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLISASVV*VCRWWG
Trigger: ACCCCACCACCTACAAACGCAGACTACAGAAGCGGA...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTGGCGGACAAATTAGATaGGGTTTTGCTGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGGGQIR*GFADLE
Trigger: CTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCC...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNLSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTGGATGGCCGGGTAGTTaGGCAGTGAGACCTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFGWPGS*AVRPCP
Trigger: AGGACAAGGTCTCACTGCCCAACTACCCGGCCATCC...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTT +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPRPQSH*SAGSGL
Trigger: AAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCT...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGAGCCCCAGGGCCTGGTaGCCTCTCCAGTCTCATTCT +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQSPRAW*PLQSHS
Trigger: AGAATGAGACTGGAGAGGCCACCAGGCCCTGGGGCT...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTTCCTGAGAAATAGTTaGTTCAGTAACACCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTFLRNS*FSNTLH
Trigger: GTGGAGGGTGTTACTGAACCAACTATTTCTCAGGAA...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGCATCACTGGTGGTGGTaGATTCTCCACTCACTTCTG +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWHHWWW*ILHSLL
Trigger: CAGAAGTGAGTGGAGAATCCACCACCACCAGTGATG...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTAAGTTTGCTTTGCTTTaGCATTCGGCGGACAAATTA +
Preference number: 4 (lower is better)
Translates to: PVPALVPGKARWEIEEMSKFALL*HSADKL
Trigger: TAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAACGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPLTAAH*SQGVLK
Trigger: TTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCAGATGCTTGGCCACTaGGTTCAGTTCCTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPQMLGH*VQFLKG
Trigger: TCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCCCTTTTTACACGTaGAGGGGAGGTGGTAATTGC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLICPFYT*RGGGNC
Trigger: GCAATTACCACCTCCCCTTCACGTGTAAAAAGGGCA...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTPALIG*FLEGEL
Trigger: AAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGG...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGCTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FALLWHSADKLDAVLLIWLVSGA*PLPRVP
Trigger: TGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCCCAGACATGTCTGGTaGTCCAGAATGAGCACCACT +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPPRHVW*SRMSTT
Trigger: AGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTCTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLILEMSK*CRSLLG
Trigger: GCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAG...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACATCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTSGLPR*RHWGWP
Trigger: CGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGA...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQEGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTAAAAAGTTGTCAGGCTaGTTGGGGCGCCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIKKLSG*LGRQFS
Trigger: TGAGAACTGGCGCCCCAACCAGCCTGACAACTTTTT...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCCCTGCACTGGTCCCTaGAAAGGCACGATGGGAAAT +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLPCTGP*KGTMGN
Trigger: ATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGG...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGAGCCCAGCAATTCCGTaGCTATGCCCTGGCCATGCT +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQSPAIP*LCPGHA
Trigger: AGCATGGCCAGGGCATAGCCACGGAATTGCTGGGCT...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCCTGCTTCCTGGAAGGTaGACTTCTCTGGAGATGTTG +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTLLPGR*TSLEML
Trigger: CAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAG...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGATGGGATTCCTTATATaGCAAAAAGCGACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTMGFLI*QKATRR
Trigger: TCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCAT...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGATGGGATTCCTTATATaGCAAAAAGCGACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQMGFLI*QKATRR
Trigger: TCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCAT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAATCCAGATATTTCTCCTaGACCACTGATGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQSRYFS*TTDANG
Trigger: ACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGA...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACATAAAGAACTCCAGATaGTTCTCCACTAATACCTGG +
Preference number: 4 (lower is better)
Translates to: PALVPGKARWEIEEMSLNIKNSR*FSTNTW
Trigger: CCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTAT...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCTACATTCTGGTCCATaGACCCAGACCCTCCATGGA +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFLHSGP*TQTLHG
Trigger: TCCATGGAGGGTCTGGGTGCATGGACCAGAATGTAG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLLSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWEGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCTCCACTTACATTGGTaGTGCTGGCAAAATCCCCAC +
Preference number: 4 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPLHLHW*CWQNPH
Trigger: GTGGGGATTTTGCCAGCACCACCAATGTAAGTGGAG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTAGGATGACCTTGCCTTaGGGTCAAAGCCTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFRMTLP*GQSLRC
Trigger: ACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCT...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGTTTGCCCAGAGTCAATaGCTTACAAATGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWFAQSQ*LTNVRS
Trigger: AGATCTGACATTTGTAAGCCATTGACTCTGGGCAAA...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCCGAGTTGTCATGGTCTaGAGTTTCTACAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTRVVMV*SFYSDS
Trigger: GCTGTCACTGTAGAAACTTCAGACCATGACAACTCG...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCT +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLTEFSS*RESTSS
Trigger: AGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGT...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTATGGGATTCCTTATATaGCAAAAAGCGACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGMGFLI*QKATRR
Trigger: TCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCAT...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGCTGCCCCAGAGGGACTaGCATTTTCTTGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQLPQRD*HFLALM
Trigger: CATCAGAGCAAGAAAATGTCAGTCCCTCTGGGGCAG...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGGGAGGGGTGAGTGGGTaGATACACAAATGTGGGATT +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLGGVSG*IHKCGI
Trigger: AATCCCACATTTGTGTATGCACCCACTCACCCCTCC...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAAACCAACGATTGCACTaGTCTTGGATAAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQNQRLH*SWIKSG
Trigger: TCCTGACTTTATCCAAGAGCAGTGCAATCGTTGGTT...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAGTTCCGAGTTCTTCCTaGTCTCAGGCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTVPSSS*SQASAP
Trigger: AGGAGCAGAGGCCTGAGAGCAGGAAGAACTCGGAAC...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGTCTTGCTCTGATGGATaGGATACTGGGTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQSCSDG*DTGWWQ
Trigger: CTGCCACCACCCAGTATCCCATCCATCAGAGCAAGA...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCTTCTGGGAGGTTAACTaGCTTGGTTTCTGCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTFWEVN*LGFCFP
Trigger: TGGGAAGCAGAAACCAAGCCAGTTAACCTCCCAGAA...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACATGGAGAAGGAACCGCTaGAATGCCTCGGAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTWRRNR*NASEAE
Trigger: TTCTGCTTCCGAGGCATTTCAGCGGTTCCTTCTCCA...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTCTTTGGCCTAGTTCCTaGGAAATAGTTGGTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLILWPSS*EIVGSV
Trigger: TACTGAACCAACTATTTCTCAGGAACTAGGCCAAAG...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTAGGCACGATGGGAAATTaGAGAAATGTCTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLGTMGN*RNVSKL
Trigger: GAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCC...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTTTCTACAGTGACAGCTaGAGTGATGACCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFFYSDS*SDDPQS
Trigger: ACTCTGAGGGTCATCACTGCAGCTGTCACTGTAGAA...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGATAATAAGTTTGCTTTaGTTTGGCATTCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: VCFALAFGGQIRCGFADLIISLL*FGIRRT
Trigger: TGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTAT...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAATAATAAGTTTGCTTTaGTTTGGCATTCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: VPGKARWEIEEMSLNSVQIISLL*FGIRRT
Trigger: TGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTAT...TTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGAACTTGAACCACCAGTaGTTAGTGAAGAATAATAGA +
Preference number: 4 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWNLNHQ*LVKNNR
Trigger: TCTATTATTCTTCACTAAGCACTGGTGGTTCAAGTT...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCCTCAGCGAGTTGTCATaGTCTGAAGTTTCTACAGTG +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTLSELS*SEVSTV
Trigger: CACTGTAGAAACTTCAGACCATGACAACTCGCTGAG...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACTGGACTCAAAAAGCTaGGGTGTGTGTGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTLDSKS*GVCVTG
Trigger: CCCTGTGACACACACACCCCAGCTTTTTGAGTCCAG...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTGTGGGGAGTGATGGTTaGAATGGTAGCATATCCATA +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFVGSDG*NGSISI
Trigger: TATGGATATGCTACCATTTCAACCATCACTCCCCAC...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGGGTCAGCAAGGAAGCTaGACTGTGCAGGATAATACA +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQGQQGS*TVQDNT
Trigger: TGTATTATCCTGCACAGTTCAGCTTCCTTGCTGACC...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTATAATAAGTTTGCTTTaGTTTGGCATTCGGCGGACA +
Preference number: 4 (lower is better)
Translates to: KFALLWHSADKLDAVLLIIISLL*FGIRRT
Trigger: TGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTAT...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR GCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTGCTATGCCCTGGCCATaGTTACTATATTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFAMPWP*LLYCLM
Trigger: CATCAAGCAATATAGTAAGCATGGCCAGGGCATAGC...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCCAGAGTTACATGATTTaGCCAGAGTCAATGGCTTAC +
Preference number: 4 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTQSYMI*PESMAY
Trigger: GTAAGCCATTGACTCTGGGCAAATCATGTAACTCTG...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGTCATTGGCTGCTTCCTaGAAGGTGAACTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQSLAAS*KVNFSG
Trigger: TCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGA...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGAGTTGGGAATCCAGATaGAAGTCCACTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLSWESR*KSTKVR
Trigger: CCTGACTTTAGTGGACTTCCATCTGGATTCCCAACT...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACAGAAAACTGTCCACTaGCATCCACCATCCCAGATT +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTQKTVH*HPPSQI
Trigger: AATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTG...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR TCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGGGCACGATGGGAAATTaGAGAAATGTCTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLGTMGN*RNVSKL
Trigger: GAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCC...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR TCA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTTCTTGCAGCTCTCTCTaGAGTAGGAACCATTATATC +
Preference number: 4 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFSCSSL*SRNHYI
Trigger: GATATAATGGTTCCTACTTCAGAGAGAGCTGCAAGA...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR GCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACATTCTACAGTGACAGCTaGAGTGATGACCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTFYSDS*SDDPQS
Trigger: ACTCTGAGGGTCATCACTGCAGCTGTCACTGTAGAA...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR GCA 90 bp AGAGCCATAACTCAAATTCAGGTCTGCTTCATTTCTAGTAGACATAAATACCAGCTTCTCTGGAGATGTTaGATAAAAGACCTCACCCTC +
Preference number: 4 (lower is better)
Translates to: RAITQIQVCFISSRHKYQLLWRC*IKDLTL
Trigger: GAGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAG...CTGGTATTTATGTCTACTAGAAATGAAGCAGACCTGAATTTGAGTTATGGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR TCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTQNEHH*VLKCQK
Trigger: CTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTG...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACATTCACCTTGAAGAGTTaGACTCCCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTFTLKS*TPFSKN
Trigger: GTTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAA...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGGAAGGTGAACTTCTCTaGAGATGTTGCATAAAAGAC +
Preference number: 4 (lower is better)
Translates to: YNKFALLWHSADKLDAVLEGELL*RCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTC...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CCA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAATTCTCCACTTACATTaGTGGTGCTGGCAAAATCCC +
Preference number: 4 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTILHLH*WCWQNP
Trigger: GGGATTTTGCCAGCACCACCAATGTAAGTGGAGAAT...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS GCA 90 bp GGGGCCGGGAGGCCCGGGTCTCGCTGCGTAGCGAGGGAGACGCTCTaGGCGGGCGCTGCGCACCCCTCCTCCTGCCGGCGTCCTGTCCGC +
Preference number: 5 (lower is better)
Translates to: GAGRPGSRCVARETL*AGAAHPSSCRRPVR
Trigger: GCGGACAGGACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCTCCCGGCCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp GTAGCGAGGGAGACGCTCTGCGCGGGCGCTGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGGTCCCCTCGGGCTGTGGCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: VARETLCAGAAHPSS*RRPVRRSPRAVAAA
Trigger: CGCTGCGGCCACAGCCCGAGGGGACCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTAC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp GCCCGGGTCTCGCTGCGTAGCGAGGGAGACGCTCTGCGCGGGCGCTaGGCACCCCTCCTCCTGCCGGCGTCCTGTCCGCAGGTCCCCTCG +
Preference number: 5 (lower is better)
Translates to: ARVSLRSEGDALRGR*APLLLPASCPQVPS
Trigger: CGAGGGGACCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp CCGGAGACCCTGGCACCCGCGTCAGACGCCGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGCAGCGCTGCGCGCGTCCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: PETLAPASDAGRRGC*ERETLSSAARVLSS
Trigger: AGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCCGGCGTCTGACGCGGGTGCCAGGGTCTCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CTCCGGCGAGGCAATGACCGCCCCCGTGCGCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGAGTAGCGGGTGGGTCCCGGGCGGTA +
Preference number: 5 (lower is better)
Translates to: LRRGNDRPRAQAGLL*LLKGQRVAGGSRAV
Trigger: TACCGCCCGGGACCCACCCGCTACTCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCACGGGGGCGGTCATTGCCTCGCCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CTCCTGGGCTCAGCGTCCTGGGTGCGTCCTGGAAGCTCTTCTCAGTaGGCTGTGCTGGGGCGGCTCCTCCGAGGGTGCCGTGAGCTCCGC +
Preference number: 5 (lower is better)
Translates to: LLGSASWVRPGSSSQ*AVLGRLLRGCRELR
Trigger: GCGGAGCTCACGGCACCCTCGGAGGAGCCGCCCCAGCACAGCCCACTGAGAAGAGCTTCCAGGACGCACCCAGGACGCTGAGCCCAGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CAAGAACTTCAGTCCCACACACCTGGCGAGGCAGCTGGGGGCTCCTaGGGCCGGGAGGCCCGGGTCTCGCTGCGTAGCGAGGGAGACGCT +
Preference number: 5 (lower is better)
Translates to: QELQSHTPGEAAGGS*GREARVSLRSEGDA
Trigger: AGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCTCCCGGCCCCAGGAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGAAGTTCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CCGTCTGGTTGGCATGCACGTAGACGGTCCTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGGCCTTGGAGATGGGGTAGCGCACGC +
Preference number: 5 (lower is better)
Translates to: PSGWHARRRSSRPGG*HRSWAGPWRWGSAR
Trigger: GCGTGCGCTACCCCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAGGACCGTCTACGTGCATGCCAACCAGACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp GCGTCCTGTCCGCAGGTCCCCTCGGGCTGTGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGGCTGGCTGAGGGAATGGACACTGAA +
Preference number: 5 (lower is better)
Translates to: ASCPQVPSGCGRSGN*WVAESWLAEGMDTE
Trigger: TTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACCTGCGGACAGGACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CGGGCTGTGGCCGCAGCGGCAACTGCTGGGTTGCGGAGTCCTGGCTaGCTGAGGGAATGGACACTGAAAGGTGCCCGGAGACCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RAVAAAATAGLRSPG*LREWTLKGARRPWH
Trigger: GTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGCGGCAACTGCTGGGTaGCGGAGTCCTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLAATAG*RSPGWL
Trigger: CAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp TGTGCTCAGCGAGATGGCCGGGGTGATGCTCACGGTCTGTGCAGGTaGTCTGAGGCTCCTCCCAGTGCCCGCTGGGCTGGCACCGGATGG +
Preference number: 5 (lower is better)
Translates to: CAQRDGRGDAHGLCR*SEAPPSARWAGTGW
Trigger: CCATCCGGTGCCAGCCCAGCGGGCACTGGGAGGAGCCTCAGATCACCTGCACAGACCGTGAGCATCACCCCGGCCATCTCGCTGAGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS GCA 90 bp AACTCCTGCTCCTCGGGGGTGACGATGCTGCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCAGCATCCACCCAGGTCTCGCGGTCC +
Preference number: 5 (lower is better)
Translates to: NSCSSGVTMLLRCDC*SRHRRSASTQVSRS
Trigger: GGACCGCGAGACCTGGGTGGATGCTGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGGAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSRRHS*AASWKV
Trigger: CACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCT...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRSRRHS*AASWKV
Trigger: CACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCT...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCAGAGGGCAGTCCACTaGCCCTGTCCCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVQRAVH*PCPLTA
Trigger: AGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCCCTTCTCCTGCCTCTaGGGCTGTTGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAPFSCL*GCWSLG
Trigger: ACCCAGGCTCCAACAGCCCAAGAGGCAGGAGAAGGG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCTTCTCCTGCCTCTaGGGCTGTTGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRPFSCL*GCWSLG
Trigger: ACCCAGGCTCCAACAGCCCAAGAGGCAGGAGAAGGG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCCTTCTCCTGCCTCTaGGGCTGTTGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVPFSCL*GCWSLG
Trigger: ACCCAGGCTCCAACAGCCCAAGAGGCAGGAGAAGGG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp ACAAACTCCTGCTCCTCGGGGGTGACGATGCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGCTCAGCATCCACCCAGGTCTCGCGG +
Preference number: 5 (lower is better)
Translates to: TNSCSSGVTMLLRCD*CSRHRRSASTQVSR
Trigger: CCGCGAGACCTGGGTGGATGCTGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGAGCAGGAGTTTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGACAGAGGGCAGTCCACTaGCCCTGTCCCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGQRAVH*PCPLTA
Trigger: AGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTG...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGAGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GGPSDGSLLPAYPRQEAGDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...TCCTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGSRRHS*AASWKV
Trigger: CACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: KRQEEDTVWVGCTSAWQAVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...AGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCCACACCAGGAACCACTaGGGTCACGATCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: EDTVWVGCTSAWQAPGLSHTRNH*GHDPLL
Trigger: GAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTG...GCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGTGGCCCTGGTACTaGTTCCAGCCCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRQWPWY*FQPSSH
Trigger: ATGTGAGGAGGGCTGGAACAAGTACCAGGGCCACTG...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCAGTGGCCCTGGTACTaGTTCCAGCCCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASQWPWY*FQPSSH
Trigger: ATGTGAGGAGGGCTGGAACAAGTACCAGGGCCACTG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCGCGGCAACTGCTGGGTaGCGGAGTCCTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGAATAG*RSPGWL
Trigger: CAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGC...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GAGTGGCTGAAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCACTTCTGGGGCAGCGGACGCCTCGC +
Preference number: 5 (lower is better)
Translates to: EWLKASLVPLSPHHW*WWILHSLLGQRTPR
Trigger: GCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp ATGCGTCTCTGCAGGGCGCTGGGTCTGCTGGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGACAACGCCCAGCTGCGAGGTGTGACC +
Preference number: 5 (lower is better)
Translates to: MRLCRALGLLGPLRL*DAGADDNAQLRGVT
Trigger: GGTCACACCTCGCAGCTGGGCGTTGTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCTGTACTTTCCTCTGTaGCTGCGCCAGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSLYFPL*LRQWEA
Trigger: GGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACAG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTGTACTTTCCTCTGTaGCTGCGCCAGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLYFPL*LRQWEA
Trigger: GGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCAGAGGGCACTTCAGTaGCAGAAGGGCCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASQRALQ*QKGLLY
Trigger: GTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCTG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGCAGAGGGCACTTCAGTaGCAGAAGGGCCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAQRALQ*QKGLLY
Trigger: GTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCTG...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCAGAGGGCAGTCCACTaGCCCTGTCCCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLQRAVH*PCPLTA
Trigger: AGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCACTAATACCTGGTaGTCCAGAGGACAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSASTNTW*SRGQPA
Trigger: AGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGA...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCCCTTCTCCTGCCTCTaGGGCTGTTGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLPFSCL*GCWSLG
Trigger: ACCCAGGCTCCAACAGCCCAAGAGGCAGGAGAAGGG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCGGACGCCTCGCCTTCTaGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASGRLAF*KCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCC...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEGWKHL*GRWLFR
Trigger: TCGAAACAGCCACCTCCCCAACAGATGCTTCCATCC...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSAGWKHL*GRWLFR
Trigger: TCGAAACAGCCACCTCCCCAACAGATGCTTCCATCC...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCCGGGGGCTGCAGCAGTaGATTCTGATTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASRGLQQ*ILIHVS
Trigger: GGAAACGTGAATCAGAATCAACTGCTGCAGCCCCCG...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS TCA 90 bp TGGCCGGGTAGTTGGGCAGTGAGACCTTGTCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAGTGGCCACCAGCAGCACTACCTCCT +
Preference number: 5 (lower is better)
Translates to: WPGSWAVRPCPDRHC*PARALQWPPAALPP
Trigger: AGGAGGTAGTGCTGCTGGTGGCCACTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp GACTTCCAAGGTGGCGTCACTGGGGATGGCCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGCACTGTTGACCCGCACGCGCCCTTC +
Preference number: 5 (lower is better)
Translates to: DFQGGVTGDGRVVGQ*DLVLIGTVDPHAPF
Trigger: GAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp AGTAGACATCGTAGGTCTCTGTTGATGGGCGCACGCCATAGGTCCTaGCCCCTGGGCTGCTGTCCTTGTCACCCACGCATGGGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: SRHRRSLLMGARHRS*PLGCCPCHPRMGSG
Trigger: CCCGGACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGGGGTCAGGACCTATGGCGTGCGCCCATCAACAGAGACCTACGATGTCTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CCTCGATGCCATGCATCACCTCGCAGCGGTAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTTCCAAGGTGGCGTCACTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: PRCHASPRSGRPQSH*SAGSGLPRWRHWGW
Trigger: CCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCTACCGCTGCGAGGTGATGCATGGCATCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp TGGCTGAAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTGGTaGTGGATTCTCCACTCACTTCTGGGGCAGCGGACGCCTCGCCTT +
Preference number: 5 (lower is better)
Translates to: WLKASLVPLSPHHWW*WILHSLLGQRTPRL
Trigger: AAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp TGGGAGTGGCTGAAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCACTCACTTCTGGGGCAGCGGACGCCT +
Preference number: 5 (lower is better)
Translates to: WEWLKASLVPLSPHH*WWWILHSLLGQRTP
Trigger: AGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAGCCACTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCATCGTAGGTCTCTGTaGATGGGCGCACGCCATAGG +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSHRRSL*MGARHR
Trigger: CCTATGGCGTGCGCCCATCAACAGAGACCTACGATG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGTACTTTCCTCTGTaGCTGCGCCAGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWLYFPL*LRQWEA
Trigger: GGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACAG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCTGTACTTTCCTCTGTaGCTGCGCCAGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLLYFPL*LRQWEA
Trigger: GGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACAG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAGGAGACCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQRRPRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCCACCATCCCAGATTaGCCTGACAGATCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSTIPD*PDRSAS
Trigger: AGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGGACGCCTCGCCTTCTaGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLGRLAF*KCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGTGGCCCTGGTACTaGTTCCAGCCCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAQWPWY*FQPSSH
Trigger: ATGTGAGGAGGGCTGGAACAAGTACCAGGGCCACTG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CGATGCCTTTCACCACGACTTCCAGGGTGGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGCGGTAGACCCCAGAGTCATTGGAGC +
Preference number: 5 (lower is better)
Translates to: RCLSPRLPGWPRCPR*HASPRSGRPQSHWS
Trigger: GCTCCAATGACTCTGGGGTCTACCGCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGGTGAAAGGCATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp GCCCGTGGTGGCCAGCCGGGCACCCAGCCGCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTTCTCTGGAGATGTTGCATAAAAGAC +
Preference number: 5 (lower is better)
Translates to: ARGGQPGTQPPALIG*FLEGELLWRCCIKD
Trigger: GTCTTTTATGCAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCTGGGTGCCCGGCTGGCCACCACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp ATCAGGGGACCCAGAATCTTCTCTGCTGGCCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGGATAGGCGGACGTCTCACTGCTAGA +
Preference number: 5 (lower is better)
Translates to: IRGPRIFSAGLRGGR*PEPSFRIGGRLTAR
Trigger: TCTAGCAGTGAGACGTCCGCCTATCCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGGTCCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CACTGGTACCGCACCAGGGAATTGATCTCATACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGCTCCACCACAGGGGGCTCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: HWYRTRELISYRSFF*PKVLACSTTGGSPQ
Trigger: CTGCGGAGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GGTAGACCCCAGAGTCATTGGAGCGCAGGCTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCGGGTAGTTGGGCAGTGAGACCTTGT +
Preference number: 5 (lower is better)
Translates to: GRPQSHWSAGSGLPR*RHWGWPGSWAVRPC
Trigger: ACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CTGAAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTGGTGGTaGATTCTCCACTCACTTCTGGGGCAGCGGACGCCTCGCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LKASLVPLSPHHWWW*ILHSLLGQRTPRLL
Trigger: AAGAAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAACCTCAGCGGGGACGGTaGGGGGATGCTGACACTCAG +
Preference number: 5 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKEPQRGR*GDADTQ
Trigger: CTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGG...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCACACCAGGAACCACTaGGGTCACGATCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWHTRNH*GHDPLL
Trigger: GAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGCACACCAGGAACCACTaGGGTCACGATCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLHTRNH*GHDPLL
Trigger: GAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTG...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCTGAGGGTACAGCAGTaGTCTCCTCTTCTACGGGGA +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWALRVQQ*SPLLRG
Trigger: TCCCCGTAGAAGAGGAGACAACTGCTGTACCCTCAG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCTGAGGGTACAGCAGTaGTCTCCTCTTCTACGGGGA +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGLRVQQ*SPLLRG
Trigger: TCCCCGTAGAAGAGGAGACAACTGCTGTACCCTCAG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACTGAGGGTACAGCAGTaGTCTCCTCTTCTACGGGGA +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSLRVQQ*SPLLRG
Trigger: TCCCCGTAGAAGAGGAGACAACTGCTGTACCCTCAG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGAGGGCACTTCAGTaGCAGAAGGGCCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWAQRALQ*QKGLLY
Trigger: GTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCTG...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCAGAGGGCAGTCCACTaGCCCTGTCCCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRQRAVH*PCPLTA
Trigger: AGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACAGAGGGAAGACCACTaGTTTCTGGAGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSQREDH*FLELAH
Trigger: GTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCAGAGGGAAGACCACTaGTTTCTGGAGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGQREDH*FLELAH
Trigger: GTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGGAGACCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSRRPRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTAGGAGACCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWARRPRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCAGGAGACCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGRRPRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGGGACGCCTCGCCTTCTaGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: QEEDTVWVGCTSAWQAPGGRLAF*KCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCC...CCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTCTTGGGCATTGTTGTaGACAAACTCCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: TPSGWDARQPGRLLGSASSWALL*TNSCSS
Trigger: CGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAGA...GGACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCTCTTGGGCATTGTTGTaGACAAACTCCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVSWALL*TNSCSS
Trigger: CGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAGA...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGCGGCAACTGCTGGGTaGCGGAGTCCTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAAATAG*RSPGWL
Trigger: CAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 90 bp GTCTCCGCTGATTTCAGTCCTGTCTCCAGAAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: VSADFSPVSRSRGSG*RQAWCLCPHITGGG
Trigger: ACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACAGGACTGAAATCAGCGGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp GAAGGTCCTGGCATGCTCCACCACAGGGGGCTCTCCGCAGGCCACTaGGGGGCAAACACCCTTTATAAAGGGTCTCATAGGGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: EGPGMLHHRGLSAGH*GANTLYKGSHRVSW
Trigger: CCAGGAGACCCTATGAGACCCTTTATAAAGGGTGTTTGCCCCTCAGTGGCCTGCGGAGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558604.1
CDS GCA 90 bp GAATTGATCTCATACCGGTCCTTCTTCTGCCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCTCCGCAGGCCACTGAGGGGCAAACA +
Preference number: 5 (lower is better)
Translates to: ELISYRSFFCPKVLA*STTGGSPQATEGQT
Trigger: TGTTTGCCCCTCAGTGGCCTGCGGAGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558604.1
CDS CCA 90 bp CATTGGAGCGCAGGCTCTGGACTTCCAAGGTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTGAGACCTTGTCCTGATAGGCACTGT +
Preference number: 5 (lower is better)
Translates to: HWSAGSGLPRWRHWG*PGSWAVRPCPDRHC
Trigger: ACAGTGCCTATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CAGAGTCATTGGAGCGCAGGCTCTGGACTTCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGGGCAGTGAGACCTTGTCCTGATAGG +
Preference number: 5 (lower is better)
Translates to: QSHWSAGSGLPRWRH*GWPGSWAVRPCPDR
Trigger: CCTATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATGACTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GATCACGCTGCCTCGGGCTTCACCCTCAGTGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCAGGTCACTGTCTGGACGGTGATGTC +
Preference number: 5 (lower is better)
Translates to: DHAASGFTLSDVSRQ*QLHVRPGHCLDGDV
Trigger: GACATCACCGTCCAGACAGTGACCTGGCCTGACATGGAGCTGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCCGAGGCAGCGTGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCCACACCAGGAACCACTaGGGTCACGATCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: KATRRGHRLGGMHVSLAGHTRNH*GHDPLL
Trigger: GAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTG...GCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCTGAGGGTACAGCAGTaGTCTCCTCTTCTACGGGGA +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPLRVQQ*SPLLRG
Trigger: TCCCCGTAGAAGAGGAGACAACTGCTGTACCCTCAG...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCCCACTAGGGAAACAGTaGGGAATCCAGATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLPLGKQ*GIQMEV
Trigger: GACTTCCATCTGGATTCCCAACTGTTTCCCTAGTGG...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGTCCACTAATACCTGGTaGTCCAGAGGACAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLSTNTW*SRGQPA
Trigger: AGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGA...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTCCACTAATACCTGGTaGTCCAGAGGACAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSTNTW*SRGQPA
Trigger: AGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTCCACCATCCCAGATTaGCCTGACAGATCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSSTIPD*PDRSAS
Trigger: AGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGA...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCCACCATCCCAGATTaGCCTGACAGATCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASTIPD*PDRSAS
Trigger: AGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGGCAGGATTCTCCACTTACATaGGTGGTGCTGGCAAAATCC +
Preference number: 5 (lower is better)
Translates to: AEVPLMALSCRLTLGRRQDSPLT*VVLAKS
Trigger: GGATTTTGCCAGCACCACCAATGTAAGTGGAGAATC...CTGCCTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTGATTCTCCACTTACATaGGTGGTGCTGGCAAAATCC +
Preference number: 5 (lower is better)
Translates to: GHRLGGMHVSLAGSWAQRDSPLT*VVLAKS
Trigger: GGATTTTGCCAGCACCACCAATGTAAGTGGAGAATC...ACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPGWKHL*GRWLFR
Trigger: TCGAAACAGCCACCTCCCCAACAGATGCTTCCATCC...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGGGGGCTGCAGCAGTaGATTCTGATTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLRGLQQ*ILIHVS
Trigger: GGAAACGTGAATCAGAATCAACTGCTGCAGCCCCCG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS TCA 90 bp ACCAGGAACCACTTGGGTCACGATCCACTCCTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTCTTCTTCTCCTGGAGAAGGAACCGC +
Preference number: 5 (lower is better)
Translates to: TRNHLGHDPLLHTRG*CGCATLFFSWRRNR
Trigger: GCGGTTCCTTCTCCAGGAGAAGAAGAGGGTGGCACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp GACTCTGGGATGCTGGTGCTGATGACAACGCCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTGATTTCAGTCCTGTCTCCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: DSGMLVLMTTPSCEV*PDRSPLISVLSPEA
Trigger: GGCTTCTGGAGACAGGACTGAAATCAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGGCGTTGTCATCAGCACCAGCATCCCAGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp GGCGCTGGACAAACCCCTCTGTGCACTGGTACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCTTCTGCCCGAAGGTCCTGGCATGCT +
Preference number: 5 (lower is better)
Translates to: GAGQTPLCTGTAPGN*SHTGPSSARRSWHA
Trigger: AGCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCCAGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp TCCAGGTCTCCAGAGGGCAGTCCACTTGCCCTGTCCCCTGACAGCTaGCCACTGAAGTCAAGGTGTCCTGAAACATCTCCACTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: SRSPEGSPLALSPDS*PLKSRCPETSPLPV
Trigger: CACAGGCAGTGGAGATGTTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTGGAGACCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GTTGTCTCCTCTTCTACGGGGACAGCAGCCACACCAGGAACCACTTaGGTCACGATCCACTCCTCCACACCAGAGGGTGATGTGGGTGTG +
Preference number: 5 (lower is better)
Translates to: VVSSSTGTAATPGTT*VTIHSSTPEGDVGV
Trigger: CACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTGGCTGCTGTCCCCGTAGAAGAGGAGACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GAGGACTCAATTTCTAGATGCGTCTCTGCAGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGGATGCTGGTGCTGATGACAACGCCC +
Preference number: 5 (lower is better)
Translates to: EDSISRCVSAGRWVC*VHSDSGMLVLMTTP
Trigger: GGGCGTTGTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CACCGGATGGTGGGCATGTGGCGCTGGACAAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTGATCTCATACCGGTCCTTCTTCTGC +
Preference number: 5 (lower is better)
Translates to: HRMVGMWRWTNPSVH*YRTRELISYRSFFC
Trigger: GCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSATSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGCTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVLTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCATCGTAGGTCTCTGTaGATGGGCGCACGCCATAGG +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRHRRSL*MGARHR
Trigger: CCTATGGCGTGCGCCCATCAACAGAGACCTACGATG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGAGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DKKRTPSGWDARQPGRLLVPEGS*PKSKSP
Trigger: TGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAAC...CAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCACCACTAGGGAAACAGTaGGGAATCCAGATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSPLGKQ*GIQMEV
Trigger: GACTTCCATCTGGATTCCCAACTGTTTCCCTAGTGG...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTCCACCATCCCAGATTaGCCTGACAGATCTGCCTCT +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSTIPD*PDRSAS
Trigger: AGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCGATTCTCCACTTACATaGGTGGTGCTGGCAAAATCC +
Preference number: 5 (lower is better)
Translates to: EEDTVWVGCTSAWQAPGLDSPLT*VVLAKS
Trigger: GGATTTTGCCAGCACCACCAATGTAAGTGGAGAATC...GAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVLSTGG*RTQFLD
Trigger: ATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAG...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCCCTGGTCTGCAGCAGTaGATTCTGATTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: KKRTPSGWDARQPGRLLGPGLQQ*ILIHVS
Trigger: GGAAACGTGAATCAGAATCAACTGCTGCAGACCAGG...GCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000352105.11
ENST00000559004.5
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTTCTTGGGCATTGTTGTaGACAAACTCCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWASWALL*TNSCSS
Trigger: CGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAGA...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCGATCCACTGGTAGTCTaGGGCATTGTTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVDPLVV*GIVVDK
Trigger: TTTGTCAACAACAATGCCCAAGACTACCAGTGGATC...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GGCAGCGGAGGTCCCTCTGATGGCTCTCTCCTGCCGGCTTACCCTCGGCAGGAGAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GSGGPSDGSLLPAYPRQEKLDAV*LIWRGE
Trigger: CTCACCCCTCCAAATCAGCAAAACCGCATCTAATTT...CTCCTGCCGAGGGTAAGCCGGCAGGAGAGAGCCATCAGAGGGACCTCCGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS TCA 90 bp GTGGATTCTCCACTCACTTCTGGGGCAGCGGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCGCTCACTCCTAGGCCAGAGGATCTC +
Preference number: 5 (lower is better)
Translates to: VDSPLTSGAADASPS*NVKVLPLTPRPEDL
Trigger: GAGATCCTCTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CTTGGGTCACGATCCACTCCTCCACACCAGAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTGGAGAAGGAACCGCTGAAATGCCTC +
Preference number: 5 (lower is better)
Translates to: LGSRSTPPHQRVMWV*HPLLLLEKEPLKCL
Trigger: GAGGCATTTCAGCGGTTCCTTCTCCAGGAGAAGAAGAGGGTGGCACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CTCTGTCCCCACATCACTGGTGGTGGTGGATTCTCCACTCACTTCTaGGGCAGCGGACGCCTCGCCTTCTTGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LCPHITGGGGFSTHF*GSGRLAFLKCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp AGGAGGCTTGAGGACTCAATTTCTAGATGCGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCAGACTCTGGGATGCTGGTGCTGATG +
Preference number: 5 (lower is better)
Translates to: RRLEDSISRCVSAGR*VCWVHSDSGMLVLM
Trigger: CATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTCAAGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCGTTCACCTTGAAGAGTaGGACTCCCTTCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSVHLEE*DSLLQE
Trigger: TTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAAC...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCCACTAGGGAAACAGTaGGGAATCCAGATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWPLGKQ*GIQMEV
Trigger: GACTTCCATCTGGATTCCCAACTGTTTCCCTAGTGG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCACTAGGGAAACAGTaGGGAATCCAGATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLPLGKQ*GIQMEV
Trigger: GACTTCCATCTGGATTCCCAACTGTTTCCCTAGTGG...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGTCAGTTATGCCAAAGGGTaGACTAGTGCCATAAAGAAC +
Preference number: 5 (lower is better)
Translates to: DTVWVGCTSAWQAPGLSVSYAKG*TSAIKN
Trigger: GTTCTTTATGGCACTAGTCAACCCTTTGGCATAACT...GACGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: RGHRLGGMHVSLAGSWAQLSTGG*RTQFLD
Trigger: ATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAG...CTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTTCTTGGGCATTGTTGTaGACAAACTCCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: RQEEDTVWVGCTSAWQAPSWALL*TNSCSS
Trigger: CGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAGA...AGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAGCGACGATTGCACTGCTCTaGGATAAAGTCAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: RTPSGWDARQPGRLLGSATIALL*DKVRKQ
Trigger: TTGTTTCCTGACTTTATCCAAGAGCAGTGCAATCGT...CGCTGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCCATTCAGACAAGGGCTaGAGAGGCACTCATCAATGT +
Preference number: 5 (lower is better)
Translates to: ATRRGHRLGGMHVSLAGSHSDKG*RGTHQC
Trigger: ACATTGATGAGTGCCTCTCAAGCCCTTGTCTGAATG...GGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAGCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAAGGGTCAAAGCCTGCGTaGTGCTGGTTTCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RAGKGHWDKSLIKASGREGSKPA*CWFQSW
Trigger: CCAGCTCTGAAACCAGCACAACGCAGGCTTTGACCC...TTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 90 bp CCCCTCAAGTCTGTCTACAAAGCAGTAGACATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGTCCTGACCCCTGGGCTGCTGTCCTT +
Preference number: 5 (lower is better)
Translates to: PLKSVYKAVDIVGLC*WAHAIGPDPWAAVL
Trigger: AAGGACAGCAGCCCAGGGGTCAGGACCTATGGCGTGCGCCCATCAACAGAGACCTACGATGTCTACTGCTTTGTAGACAGACTTGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CTTGAGGACTCAATTTCTAGATGCGTCTCTGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCTGGGATGCTGGTGCTGATGACAACG +
Preference number: 5 (lower is better)
Translates to: LEDSISRCVSAGRWV*WVHSDSGMLVLMTT
Trigger: CGTTGTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GAACCACTTGGGTCACGATCCACTCCTCCACACCAGAGGGTGATGTaGGTGTGCCACCCTCTTCTTCTCCTGGAGAAGGAACCGCTGAAA +
Preference number: 5 (lower is better)
Translates to: EPLGSRSTPPHQRVM*VCHPLLLLEKEPLK
Trigger: TTTCAGCGGTTCCTTCTCCAGGAGAAGAAGAGGGTGGCACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAGTGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: RRGHRLGGMHVSLAGSWATSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...AGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: SLYDKKRQEEDTVWVGCTRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...CGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGATTATGTTCCAAGTGCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: STLSTTEQPWGTGIMFQVPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...CACTTGGAACATAATCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTTCTCACGCCTGGCTaGTCCCCACCGCAGGCAGGC +
Preference number: 5 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSVLTPG*SPPQAG
Trigger: GCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAAC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRVPEGS*PKSKSP
Trigger: TGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAAC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: TKSDKKRTPSGWDARQPGGWKHL*GRWLFR
Trigger: TCGAAACAGCCACCTCCCCAACAGATGCTTCCATCC...GCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCAGCAGCCCTGCCGAGTaGCCACCTGTTAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: LSLHWSLERHDGKLKKCLSSPAE*PPVRVA
Trigger: TGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGCT...GAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCATTCAGACAAGGGCTaGAGAGGCACTCATCAATGT +
Preference number: 5 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWHSDKG*RGTHQC
Trigger: ACATTGATGAGTGCCTCTCAAGCCCTTGTCTGAATG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp TGTCCAGCTCACTGGAGGGCAGTCCAGATATTTCTCCTGCACCACTaGTGCCAATGGTTCCCCTCCCTTCCAGTTCACTTGCAGTGGAGG +
Preference number: 5 (lower is better)
Translates to: CPAHWRAVQIFLLHH*CQWFPSLPVHLQWR
Trigger: CCTCCACTGCAAGTGAACTGGAAGGGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGACTGCCCTCCAGTGAGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp GTCTCTTCTCCTGAGTACAGGAGGCTTGAGGACTCAATTTCTAGATaGGTCTCTGCAGGGCGCTGGGTCTGCTGGGTCCACTCAGACTCT +
Preference number: 5 (lower is better)
Translates to: VSSPEYRRLEDSISR*VSAGRWVCWVHSDS
Trigger: AGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAGGAGAAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CCAGAGGGACTGACATTTTCTTGCTCTGATGGATGGGATACTGGGTaGTGGCAGGATCCGGTGAACCCAGTGGGGTCCTCTCCAGACAAA +
Preference number: 5 (lower is better)
Translates to: PEGLTFSCSDGWDTG*WQDPVNPVGSSPDK
Trigger: TTTGTCTGGAGAGGACCCCACTGGGTTCACCGGATCCTGCCACCACCCAGTATCCCATCCATCAGAGCAAGAAAATGTCAGTCCCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCATCGTAGGTCTCTGTaGATGGGCGCACGCCATAGG +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPHRRSL*MGARHR
Trigger: CCTATGGCGTGCGCCCATCAACAGAGACCTACGATG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TGGGGGCAGCATGGCTGGGAAATTTCTGGGAGGTTAACTGGCTTGGTTTCTGCTCATCGTAGGTCTCTGTaGATGGGCGCACGCCATAGG +
Preference number: 5 (lower is better)
Translates to: WGQHGWEISGRLTGLVSAHRRSL*MGARHR
Trigger: CCTATGGCGTGCGCCCATCAACAGAGACCTACGATG...AGCAGAAACCAAGCCAGTTAACCTCCCAGAAATTTCCCAGCCATGCTGCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCACACCAGGAACCACTaGGGTCACGATCCACTCCTC +
Preference number: 5 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCHTRNH*GHDPLL
Trigger: GAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCTGTACTTTCCTCTGTaGCTGCGCCAGTGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSLYFPL*LRQWEA
Trigger: GGCCTCCCACTGGCGCAGCAACAGAGGAAAGTACAG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAVPEGS*PKSKSP
Trigger: TGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAAC...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGGCTCAAGTTATGCCAAAGGGTaGACTAGTGCCATAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KRTPSGWDARQPGRLLGSSYAKG*TSAIKN
Trigger: GTTCTTTATGGCACTAGTCAACCCTTTGGCATAACT...TGAGCCCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCCTGGCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: TRRGHRLGGMHVSLAGSWLSTGG*RTQFLD
Trigger: ATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAG...CCAGGAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCAGTGGCCCTGGTACTaGTTCCAGCCCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPQWPWY*FQPSSH
Trigger: ATGTGAGGAGGGCTGGAACAAGTACCAGGGCCACTG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCAGTGGCCCTGGTACTaGTTCCAGCCCTCCTCACAT +
Preference number: 5 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCQWPWY*FQPSSH
Trigger: ATGTGAGGAGGGCTGGAACAAGTACCAGGGCCACTG...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTCGATCCACTGGTAGTCTaGGGCATTGTTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: SDKKRTPSGWDARQPGRLDPLVV*GIVVDK
Trigger: TTTGTCAACAACAATGCCCAAGACTACCAGTGGATC...GAGCCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp CAGAATGCTCCCCAGACATGTCTGGTGCTCCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAGGCCCTTCTCCTGCCTCTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: QNAPQTCLVLQNEHH*VLKCQKALLLPLGL
Trigger: CAGCCCAAGAGGCAGGAGAAGGGCCTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGGGAGCATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp TATAAAGGGTCTCATAGGGTCTCCTGGGATGACCTATGCTGGTTGTaGCCCGAGGCACTGTGGGGGACACAGCCTCAACATCTGACAGTG +
Preference number: 5 (lower is better)
Translates to: YKGSHRVSWDDLCWL*PEALWGTQPQHLTV
Trigger: CACTGTCAGATGTTGAGGCTGTGTCCCCCACAGTGCCTCGGGTCACAACCAGCATAGGTCATCCCAGGAGACCCTATGAGACCCTTTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558604.1
CDS GCA 90 bp CCCACTAATGTCCAGCTCACTGGAGGGCAGTCCAGATATTTCTCCTaGACCACTGATGCCAATGGTTCCCCTCCCTTCCAGTTCACTTGC +
Preference number: 5 (lower is better)
Translates to: PTNVQLTGGQSRYFS*TTDANGSPPFQFTC
Trigger: GCAAGTGAACTGGAAGGGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGACTGCCCTCCAGTGAGCTGGACATTAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CACCCTCCATCTCCTCGGCGAAGCAGTACACATCATAGGTCTCGTTaGTGTCTCGGATGCCATACGTCCTCACACCAGGAAACTCATCCT +
Preference number: 5 (lower is better)
Translates to: HPPSPRRSSTHHRSR*CLGCHTSSHQETHP
Trigger: AGGATGAGTTTCCTGGTGTGAGGACGTATGGCATCCGAGACACCAACGAGACCTATGATGTGTACTGCTTCGCCGAGGAGATGGAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp TGGGAATCCAGATGGAAGTCCACTAAAGTCAGGCAGGCCAGAGGGTaGGCCACTTCCAAGGTCCACCCCAGAATACTCACCACTAAATCC +
Preference number: 5 (lower is better)
Translates to: WESRWKSTKVRQARG*ATSKVHPRILTTKS
Trigger: GGATTTAGTGGTGAGTATTCTGGGGTGGACCTTGGAAGTGGCCCACCCTCTGGCCTGCCTGACTTTAGTGGACTTCCATCTGGATTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CTGCCGCTCACTCCTAGGCCAGAGGATCTCTCAAGGTTAGCTTCGTaGAATGCAGAGGTGGTTTCACTCAGATCAGGGGACCCAGAATCT +
Preference number: 5 (lower is better)
Translates to: LPLTPRPEDLSRLAS*NAEVVSLRSGDPES
Trigger: AGATTCTGGGTCCCCTGATCTGAGTGAAACCACCTCTGCATTCCACGAAGCTAACCTTGAGAGATCCTCTGGCCTAGGAGTGAGCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp GTTTCCATTCCGGAGAAGCTGGGATGGAAGCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAGTCTCTTCTCCTGAGTACAGGAGGC +
Preference number: 5 (lower is better)
Translates to: VSIPEKLGWKHLLGR*LFRLCESLLLSTGG
Trigger: GCCTCCTGTACTCAGGAGAAGAGACTCACACAGTCGAAACAGCCACCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCSRRHS*AASWKV
Trigger: CACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWSRRHS*AASWKV
Trigger: CACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCT...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACTCACGCCCAGGAGGTaGCCACCGCAGTTGGGCCGG +
Preference number: 5 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLLTPRR*PPQLGR
Trigger: CCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCTCTCATCGTAGGTCTCTGTaGATGGGCGCACGCCATAGG +
Preference number: 5 (lower is better)
Translates to: LAPSHPIHSAAVPSSSCSHRRSL*MGARHR
Trigger: CCTATGGCGTGCGCCCATCAACAGAGACCTACGATG...AGAGCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCAGAGGGCACTTCAGTaGCAGAAGGGCCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPQRALQ*QKGLLY
Trigger: GTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCTG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCAGAGGGCACTTCAGTaGCAGAAGGGCCTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCQRALQ*QKGLLY
Trigger: GTACAGAAGGCCCTTCTGCAACTGAAGTGCCCTCTG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCTGCCAGAGGGAAGACCACTaGTTTCTGGAGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: LLAPSHPIHSAAVPSSSCQREDH*FLELAH
Trigger: GTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTG...GCAGGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCCAGAGGGAAGACCACTaGTTTCTGGAGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSAQREDH*FLELAH
Trigger: GTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTG...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCAGGAGACCCAGATGCTaGGCCACTGAGTTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: YDKKRQEEDTVWVGCTSARRPRC*ATEFSS
Trigger: GGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT...GGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTCCCTTCTCCTGCCTCTaGGGCTGTTGGAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGPFSCL*GCWSLG
Trigger: ACCCAGGCTCCAACAGCCCAAGAGGCAGGAGAAGGG...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGACGCCTCGCCTTCTaGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPGRLAF*KCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCC...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCACCTGGTCTGCAGCAGTaGATTCTGATTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: QKATRRGHRLGGMHVSLAPGLQQ*ILIHVS
Trigger: GGAAACGTGAATCAGAATCAACTGCTGCAGACCAGG...TGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000352105.11
CDS-3UTR CAA 90 bp GTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGCGGCAACTGCTGGGTaGCGGAGTCCTGGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: VCFALAFGGQIRCGFADLAATAG*RSPGWL
Trigger: CAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGC...CAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GCAGGGAAGGGGCACTGGGACAAGAGCCTCATCAAAGCCTCTGGGAGAGAATTGTTTAGAAGGATGACCTaGCCTTGGGGTCAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: AGKGHWDKSLIKASGRELFRRMT*PWGQSL
Trigger: CAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAA...CAATTCTCTCCCAGAGGCTTTGATGAGGCTCTTGTCCCAGTGCCCCTTCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 90 bp ACTGACATCAGGAGACCCAGATGCTTGGCCACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCTCCCACTAATGTCCAGCTCACTGGA +
Preference number: 5 (lower is better)
Translates to: TDIRRPRCLATEFSS*RESTSSPTNVQLTG
Trigger: TCCAGTGAGCTGGACATTAGTGGGAGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGATGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 90 bp TGTTCCAGAAAACTGTCCACTGACATCCACCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGAAGGGAGGCCACTGAGTTCCACAGA +
Preference number: 5 (lower is better)
Translates to: CSRKLSTDIHHPRFA*QICLSGREATEFHR
Trigger: TCTGTGGAACTCAGTGGCCTCCCTTCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp CCTCGGCGAAGCAGTACACATCATAGGTCTCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAGGAAACTCATCCTTGTCTCCATAGC +
Preference number: 5 (lower is better)
Translates to: PRRSSTHHRSRWCLG*HTSSHQETHPCLHS
Trigger: GCTATGGAGACAAGGATGAGTTTCCTGGTGTGAGGACGTATGGCATCCGAGACACCAACGAGACCTATGATGTGTACTGCTTCGCCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 90 bp AAGAGAGACAGTGGGGAAACTAGATGGAGTTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCTCCCAATCTCAGCTCTGGAGGATTC +
Preference number: 5 (lower is better)
Translates to: KRDSGETRWSSTAII*SRGQAAPNLSSGGF
Trigger: GAATCCTCCAGAGCTGAGATTGGGAGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGAACTCCATCTAGTTTCCCCACTGTCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp AAGAGTCCAGGTATTTCCCCACTGACATCAGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCTGAAGGGAGTCCACTAGCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: KSPGISPLTSGDPDA*PLSSVPEGSPLALP
Trigger: TGGGAGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGATGTCAGTGGGGAAATACCTGGACTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTTCCACTAATACCTGGTaGTCCAGAGGACAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: PVPALVPGKARWEIEEMSSTNTW*SRGQPA
Trigger: AGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGA...AGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRLSTGG*RTQFLD
Trigger: ATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAG...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGGATCCACTGGTAGTCTaGGGCATTGTTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRDPLVV*GIVVDK
Trigger: TTTGTCAACAACAATGCCCAAGACTACCAGTGGATC...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGAAAGGATGACCTTGCCTaGGGGTCAAAGCCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGKDDLA*GSKPAL
Trigger: CAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCTT...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp CCACTGCTCCTGGCCTTGAATTGGGTTTTAAAAGGTGACCCTGGATGTCTGGGAGGGAGGTTAACTGGCTaGGTTTCTGCTTCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: PLLLALNWVLKGDPGCLGGRLTG*VSASQS
Trigger: GCTCTGGGAAGCAGAAACCAAGCCAGTTAACCTCCC...TCCCAGACATCCAGGGTCACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 90 bp GCTGGGATGGAAGCATCTGTTGGGGAGGTGGCTGTTTCGACTGTGTaGGTCTCTTCTCCTGAGTACAGGAGGCTTGAGGACTCAATTTCT +
Preference number: 5 (lower is better)
Translates to: AGMEASVGEVAVSTV*VSSPEYRRLEDSIS
Trigger: AGAAATTGAGTCCTCAAGCCTCCTGTACTCAGGAGAAGAGACTCACACAGTCGAAACAGCCACCTCCCCAACAGATGCTTCCATCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp TTCCACCAAAGTTCTGTCTACAAGAGAGACAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATATGCTCCCGAGGGCAGGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: FHQSSVYKRDSGETR*SSTAIICSRGQAAP
Trigger: GGGAGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGAACTCCATCTAGTTTCCCCACTGTCTCTCTTGTAGACAGAACTTTGGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp TATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCTTGCCTTaGGGTCAAAGCCTGCGTTGTGCTGGTTTCAGAGCTGGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: YLYLSLGNFRRMTLP*GQSLRCAGFRAGSA
Trigger: GGCAGAGCCAGCTCTGAAACCAGCACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAGCTGTTCACCTTGAAGAGTaGGACTCCCTTCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: VTVLVWGKPAVGLVSKEAVHLEE*DSLLQE
Trigger: TTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAAC...AGCTTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKETSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp AAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTGGCAGGAGTTATGCCAAAGGGTaGACTAGTGCCATAAAGAAC +
Preference number: 5 (lower is better)
Translates to: KSDKKRTPSGWDARQPGRSYAKG*TSAIKN
Trigger: GTTCTTTATGGCACTAGTCAACCCTTTGGCATAACT...CCTGCCAGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTTCTTGGGCATTGTTGTaGACAAACTCCTGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPSWALL*TNSCSS
Trigger: CGAGGAGCAGGAGTTTGTCAACAACAATGCCCAAGA...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGAGGGGTCTGAAAGAGGGACCCTaGGAGGGAACCCAACTCCCA +
Preference number: 5 (lower is better)
Translates to: LLWHSADKLDAVLLIWRGLKEGP*EGTQLP
Trigger: TGGGAGTTGGGTTCCCTCCAAGGGTCCCTCTTTCAG...ACCCCTCCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGGGTAACTGTACTGGTGTGGGGGAAACCAGCAGTGGGCTTGGTCAGCAAGGAAAGGTCAACGAAAAACTaGAACCACCAGTGCTTAGTG +
Preference number: 5 (lower is better)
Translates to: GVTVLVWGKPAVGLVSKERSTKN*NHQCLV
Trigger: CACTAAGCACTGGTGGTTCAAGTTTTTCGTTGACCT...TTCCTTGCTGACCAAGCCCACTGCTGGTTTCCCCCACACCAGTACAGTTACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 90 bp AAGCTCAGTCACTCCAGATGTTTCCCCACTAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACCAAAGAGTCCAGGTATTTCCCCACT +
Preference number: 5 (lower is better)
Translates to: KLSHSRCFPTSVRKP*WLSTDTKESRYFPT
Trigger: AGTGGGGAAATACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACTAGTGGGGAAACATCTGGAGTGACTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 90 bp CTGACCTCAGCTATGCCACTTGGTAGGCCACTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAATCGACTGTTCCAGAAAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: LTSAMPLGRPLNSGV*DVNPLESTVPENCP
Trigger: TGGACAGTTTTCTGGAACAGTCGATTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTGGCATAGCTGAGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTGTTCACCTTGAAGAGTaGGACTCCCTTCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCVHLEE*DSLLQE
Trigger: TTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAAC...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSTSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGCCTGGGCTGCTGTCCTaGTCACCCACGCATGGGGTC +
Preference number: 5 (lower is better)
Translates to: SFFNGIPYMTKSDKKRTPPGLLS*SPTHGV
Trigger: GACCCCATGCGTGGGTGACAAGGACAGCAGCCCAGG...CGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTACAGAGGGCAGTCCACTaGCCCTGTCCCCTGACAGCT +
Preference number: 5 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLQRAVH*PCPLTA
Trigger: AGCTGTCAGGGGACAGGGCAAGTGGACTGCCCTCTG...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATTCCACTAATACCTGGTaGTCCAGAGGACAGCCCGCT +
Preference number: 5 (lower is better)
Translates to: GIPYMTKSDKKRTPSGWDSTNTW*SRGQPA
Trigger: AGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGA...ATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GCCCTCCTGGCTCCTTCTCATCCAATACATTCAGCTGCGGTTCCGAGTTCTTCCGATCCACTGGTAGTCTaGGGCATTGTTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: ALLAPSHPIHSAAVPSSSDPLVV*GIVVDK
Trigger: TTTGTCAACAACAATGCCCAAGACTACCAGTGGATC...GGAAGAACTCGGAACCGCAGCTGAATGTATTGGATGAGAAGGAGCCAGGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCTGAAAGAGGGACCCTaGGAGGGAACCCAACTCCCA +
Preference number: 5 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWLKEGP*EGTQLP
Trigger: TGGGAGTTGGGTTCCCTCCAAGGGTCCCTCTTTCAG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS GCA 90 bp TACTCACCACTAAATCCAGAGGGAAGACCACTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCAGAAGGCAGTTTGCCCAAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: YSPLNPEGRPLVSGA*PLPRVPEGSLPKSK
Trigger: CTTGGACTTGGGCAAACTGCCTTCTGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTGGATTTAGTGGTGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCVPEGS*PKSKSP
Trigger: TGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAAC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LYDKKRQEEDTVWVGCTSVPEGS*PKSKSP
Trigger: TGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAAC...TGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TTCAAAAATATAAATAGGTGCACGGAACCCTGGTGCCTGCACGGTCCCGGGGGCACGATTGCACTGCTCTaGGATAAAGTCAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: FKNINRCTEPWCLHGPGGTIALL*DKVRKQ
Trigger: TTGTTTCCTGACTTTATCCAAGAGCAGTGCAATCGT...GCCCCCGGGACCGTGCAGGCACCAGGGTTCCGTGCACCTATTTATATTTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGCCTCAATGTCTGCAGCAGTaGATTCTGATTCACGTTTCC +
Preference number: 5 (lower is better)
Translates to: MTKSDKKRTPSGWDARQPQCLQQ*ILIHVS
Trigger: GGAAACGTGAATCAGAATCAACTGCTGCAGACATTG...AGGCTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561243.7
CDS-3UTR CAA 90 bp GCTCAAGTTCTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCGACACACGGCTCCACTaGATTCTTGGGGCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: AQVLIYLYLSLGNFRRMTDTRLH*ILGASG
Trigger: CCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTC...GGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAGAACTTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGGATTCTCCACTTACATaGGTGGTGCTGGCAAAATCC +
Preference number: 5 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQDSPLT*VVLAKS
Trigger: GGATTTTGCCAGCACCACCAATGTAAGTGGAGAATC...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGGGACGCCTCGCCTTCTaGAAATGTCAAAGTGCTGCC +
Preference number: 5 (lower is better)
Translates to: FALLWHSADKLDAVLLIWGRLAF*KCQSAA
Trigger: GGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCC...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTTATAATAAGTTTGCTTaGCTTTGGCATTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCYNKFA*LWHSAD
Trigger: GTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CAA 90 bp CCCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGAGGGTTATAATAAGTTaGCTTTGCTTTGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: PPVPALVPGKARWEIEEMRVIIS*LCFGIR
Trigger: CCGAATGCCAAAGCAAAGCAAACTTATTATAACCCT...CATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CAA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCGTTCACCTTGAAGAGTaGGACTCCCTTCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCVHLEE*DSLLQE
Trigger: TTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAAC...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQTSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS-3UTR CAA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAAGGTTGCCACCGCAGTaGGGCCGGGCCTTGGAGATG +
Preference number: 5 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTRLPPQ*GRALEM
Trigger: CATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCT...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTCAGAGGGAAGACCACTaGTTTCTGGAGCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: KFALLWHSADKLDAVLLIQREDH*FLELAH
Trigger: GTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTG...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGCCACTAGGGAAACAGTaGGGAATCCAGATGGAAGTC +
Preference number: 5 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWPLGKQ*GIQMEV
Trigger: GACTTCCATCTGGATTCCCAACTGTTTCCCTAGTGG...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp GGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACTCAGTCCAAGGGTTAGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGA +
Preference number: 5 (lower is better)
Translates to: GKARWEIEEMSLNSVQGLGWKHL*GRWLFR
Trigger: TCGAAACAGCCACCTCCCCAACAGATGCTTCCATCC...TAACCCTTGGACTGAGTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTGATCCACTGGTAGTCTaGGGCATTGTTGTTGACAAA +
Preference number: 5 (lower is better)
Translates to: PYMTKSDKKRTPSGWDARDPLVV*GIVVDK
Trigger: TTTGTCAACAACAATGCCCAAGACTACCAGTGGATC...ACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CCCCTGTCCCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTAGGGTTATAATAAGTTaGCTTTGCTTTGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: PLSLHWSLERHDGKLKKCRVIIS*LCFGIR
Trigger: CCGAATGCCAAAGCAAAGCAAACTTATTATAACCCT...ACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGGGACAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CAA 90 bp GATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACTTCTCTGGAGATGTaGCATAAAAGACCTCACCCT +
Preference number: 5 (lower is better)
Translates to: DSLYDKKRQEEDTVWVGCTSLEM*HKRPHP
Trigger: AGGGTGAGGTCTTTTATGCAACATCTCCAGAGAAGT...GCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATTCTCCACTTACATaGGTGGTGCTGGCAAAATCC +
Preference number: 5 (lower is better)
Translates to: NGIPYMTKSDKKRTPSGWDSPLT*VVLAKS
Trigger: GGATTTTGCCAGCACCACCAATGTAAGTGGAGAATC...CCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp CCTGCACTGGTCCCTGGAAAGGCACGATGGGAAATTGAAGAAATGTCTCTAAACAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PALVPGKARWEIEEMSLNKLDAV*LIWRGE
Trigger: CTCACCCCTCCAAATCAGCAAAACCGCATCTAATTT...GTTTAGAGACATTTCTTCAATTTCCCATCGTGCCTTTCCAGGGACCAGTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CAA 90 bp TATATGACAAAAAGCGACAAGAAGAGGACACCGTCTGGGTGGGATGCACGTCAGTATAATAAGTTTGCTTaGCTTTGGCATTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: YMTKSDKKRTPSGWDARQYNKFA*LWHSAD
Trigger: GTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA...CTGACGTGCATCCCACCCAGACGGTGTCCTCTTCTTGTCGCTTTTTGTCATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAAGCAGCCCTGCCGAGTaGCCACCTGTTAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTSSPAE*PPVRVA
Trigger: TGCCACCCTAACAGGTGGCAACTCGGCAGGGCTGCT...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ATCTGGTACCAGACTCCACGCTCTCAACTACTGAACAACCTTGGGGGACAGGGACAAGCAGGAGAGAATTaGACAAGAGTGTACAAATTA +
Preference number: 5 (lower is better)
Translates to: IWYQTPRSQLLNNLGGQGQAGEN*TRVYKL
Trigger: TAATTTGTACACTCTTGTCAAATTCTCTCCTGCTTG...TCCCTGTCCCCCAAGGTTGTTCAGTAGTTGAGAGCGTGGAGTCTGGTACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTTGGGTTCACCTTGAAGAGTaGGACTCCCTTCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: FALLWHSADKLDAVLLIWVHLEE*DSLLQE
Trigger: TTCTTGGAGAAGGGAGTCCAACTCTTCAAGGTGAAC...CCAAATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp AAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGATTAAATTAGATGCGGTTTaGCTGATTTGGAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: KFALLWHSADKLDAVLLIKLDAV*LIWRGE
Trigger: CTCACCCCTCCAAATCAGCAAAACCGCATCTAATTT...AATCAGCAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000560601.4
CDS-3UTR CAA 90 bp TTGGGGGACAGGGATTATGTTCCAAGTGTGTCACGACCAAAAATAGGAGGATGGCTTATTTATCTCTACTaGTCTCTGGGGAACTTTAGA +
Preference number: 5 (lower is better)
Translates to: LGDRDYVPSVSRPKIGGWLIYLY*SLGNFR
Trigger: TCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAG...CCATCCTCCTATTTTTGGTCGTGACACACTTGGAACATAATCCCTGTCCCCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp GAGTTACATGATTTGCCCAGAGTCAATGGCTTACAAATGTCAGATCTAGTCTTTCCACTGCTCCTGGCCTaGAATTGGGTTTTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: ELHDLPRVNGLQMSDLVFPLLLA*NWVLKG
Trigger: ACCTTTTAAAACCCAATTCAAGGCCAGGAGCAGTGG...AAAGACTAGATCTGACATTTGTAAGCCATTGACTCTGGGCAAATCATGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TATAATAAGTTTGCTTTGCTTTGGCATTCGGCGGACAAATTAGATGCGGTTTTGCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGAT +
Preference number: 5 (lower is better)
Translates to: YNKFALLWHSADKLDAVLLSTGG*RTQFLD
Trigger: ATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAG...CAAAACCGCATCTAATTTGTCCGCCGAATGCCAAAGCAAAGCAAACTTATTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp ACTATAAAACATGGCACAGGCTGTTATTACAATCTACATTCTGGTCCATGCACCGCCATGCTTACTATATaGCTTGATGACATCACTCTC +
Preference number: 5 (lower is better)
Translates to: TIKHGTGCYYNLHSGPCTAMLTI*LDDITL
Trigger: GAGAGTGATGTCATCAAGCAATATAGTAAGCATGGC...GGTGCATGGACCAGAATGTAGATTGTAATAACAGCCTGTGCCATGTTTTATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS-3UTR CAA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAAGTTATGCCAAAGGGTaGACTAGTGCCATAAAGAAC +
Preference number: 5 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTSYAKG*TSAIKN
Trigger: GTTCTTTATGGCACTAGTCAACCCTTTGGCATAACT...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000560601.4
CDS-3UTR CAA 90 bp TTTTCCTTCTTTAATGGGATTCCTTATATGACAAAAAGCGACAAGAAGAGGACAAGGGTTATAATAAGTTaGCTTTGCTTTGGCATTCGG +
Preference number: 5 (lower is better)
Translates to: FSFFNGIPYMTKSDKKRTRVIIS*LCFGIR
Trigger: CCGAATGCCAAAGCAAAGCAAACTTATTATAACCCT...TGTCCTCTTCTTGTCGCTTTTTGTCATATAAGGAATCCCATTAAAGAAGGAAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000439576.7
ENST00000560601.4
CDS GCA 72 bp CTGGGGGCTCCTGGGGCCGGGAGGCCCGGGTCTCGCTaGGTAGCGAGGGAGACGCTCTGCGCGGGCGCTGCG +
Preference number: 6 (lower is better)
Translates to: LGAPGAGRPGSR*VARETLCAGAA
Trigger: CGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCTCCCGGCCCCAGGAGCCCCCAG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp GAGACGCTCTGCGCGGGCGCTGCGCACCCCTCCTCCTaGCGGCGTCCTGTCCGCAGGTCCCCTCGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: ETLCAGAAHPSS*RRPVRRSPRAV
Trigger: CACAGCCCGAGGGGACCTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp AGGCCCGGGTCTCGCTGCGTAGCGAGGGAGACGCTCTaGGCGGGCGCTGCGCACCCCTCCTCCTGCCGGCGT +
Preference number: 6 (lower is better)
Translates to: RPGSRCVARETL*AGAAHPSSCRR
Trigger: ACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTACGCAGCGAGACCCGGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCGCTGCGTAGCGAGGGAGACGCTCTGCGCGGGCGCTaGGCACCCCTCCTCCTGCCGGCGTCCTGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: SLRSEGDALRGR*APLLLPASCPQ
Trigger: CTGCGGACAGGACGCCGGCAGGAGGAGGGGTGCGCAGCGCCCGCGCAGAGCGTCTCCCTCGCTACGCAGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CCTGCCGGCGTCCTGTCCGCAGGTCCCCTCGGGCTGTaGCCGCAGCGGCAACTGCTGGGTTGCGGAGTCCTG +
Preference number: 6 (lower is better)
Translates to: PAGVLSAGPLGL*PQRQLLGCGVL
Trigger: CAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACCTGCGGACAGGACGCCGGCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CTGGCACCCGCGTCAGACGCCGGCCGGCGAGGGTGCTaGGAGAGAGAGACCTTGAGCAGCGCTGCGCGCGTC +
Preference number: 6 (lower is better)
Translates to: LAPASDAGRRGC*ERETLSSAARV
Trigger: GACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCCGGCGTCTGACGCGGGTGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp ACGCCGGCCGGCGAGGGTGCTGAGAGAGAGAGACCTTaGGCAGCGCTGCGCGCGTCCTCAGCTCTGCGAGCC +
Preference number: 6 (lower is better)
Translates to: TPAGEGAERERP*AALRASSALRA
Trigger: GGCTCGCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTCTCTCTCTCTCAGCACCCTCGCCGGCCGGCGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp AGAGACCTTGAGCAGCGCTGCGCGCGTCCTCAGCTCTaGGAGCCCCCTCTGGAGCGGCGGGGAGGTAGGTGG +
Preference number: 6 (lower is better)
Translates to: RDLEQRCARPQL*EPPLERRGGRW
Trigger: CCACCTACCTCCCCGCCGCTCCAGAGGGGGCTCGCAGAGCTGAGGACGCGCGCAGCGCTGCTCAAGGTCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000439576.7
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CCGCAGGTCCCCTCGGGCTGTGGCCGCAGCGGCAACTaGTGGGTTGCGGAGTCCTGGCTGGCTGAGGGAATG +
Preference number: 6 (lower is better)
Translates to: PQVPSGCGRSGN*WVAESWLAEGM
Trigger: CATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACCTGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CCAAGAACTTCAGTCCCACACACCTGGCGAGGCAGCTaGGGGCTCCTGGGGCCGGGAGGCCCGGGTCTCGCT +
Preference number: 6 (lower is better)
Translates to: PRTSVPHTWRGS*GLLGPGGPGLA
Trigger: AGCGAGACCCGGGCCTCCCGGCCCCAGGAGCCCCCAGCTGCCTCGCCAGGTGTGTGGGACTGAAGTTCTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp GGCAATGACCGCCCCCGTGCGCAGGCAGGCCTGCTGTaGCTCCTCAAAGGTCAGCGAGTAGCGGGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: GNDRPRAQAGLL*LLKGQRVAGGS
Trigger: GGACCCACCCGCTACTCGCTGACCTTTGAGGAGGCACAGCAGGCCTGCCTGCGCACGGGGGCGGTCATTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GAGGCTCCTCCCAGTGCCCGCTGGGCTGGCACCGGATaGTGGGCATGTGGCGCTGGACAAACCCCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: EAPPSARWAGTG*WACGAGQTPLC
Trigger: GCACAGAGGGGTTTGTCCAGCGCCACATGCCCACCATCCGGTGCCAGCCCAGCGGGCACTGGGAGGAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp GTCCGCAGGTCCCCTCGGGCTGTGGCCGCAGCGGCAACTGCTGGGTaGCGGAGTCCTGGCTGGCTGAGGGAATGGACACTGAAAGGTGCC +
Preference number: 6 (lower is better)
Translates to: VRRSPRAVAAAATAG*RSPGWLREWTLKGA
Trigger: GGCACCTTTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACAGCCCGAGGGGACCTGCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TGGCATGCACGTAGACGGTCCTCACGCCCAGGAGGTTaGCACCGCAGTTGGGCCGGGCCTTGGAGATGGGGT +
Preference number: 6 (lower is better)
Translates to: WHARRRSSRPGG*HRSWAGPWRWG
Trigger: ACCCCATCTCCAAGGCCCGGCCCAACTGCGGTGGCAACCTCCTGGGCGTGAGGACCGTCTACGTGCATGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCCTCGGGGGTGACGATGCTGCTCAGGTGTGACTGCTaGTCCCGACACCGGCGCTCAGCATCCACCCAGGTC +
Preference number: 6 (lower is better)
Translates to: SSGVTMLLRCDC*SRHRRSASTQV
Trigger: GACCTGGGTGGATGCTGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TGCTCCTCGGGGGTGACGATGCTGCTCAGGTGTGACTaGTGCTCCCGACACCGGCGCTCAGCATCCACCCAG +
Preference number: 6 (lower is better)
Translates to: CSSGVTMLLRCD*CSRHRRSASTQ
Trigger: CTGGGTGGATGCTGAGCGCCGGTGTCGGGAGCAGCAGTCACACCTGAGCAGCATCGTCACCCCCGAGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CCTGGCAAATGCGGCTGCCCAGGGACAGCGGTCACCTaGACGACGAGGTCCTCACTGGTGAATGCCGTGGCA +
Preference number: 6 (lower is better)
Translates to: PGKCGCPGTAVT*TTRSSLVNAVA
Trigger: TGCCACGGCATTCACCAGTGAGGACCTCGTCGTGCAGGTGACCGCTGTCCCTGGGCAGCCGCATTTGCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp ACTGCTGGGTTGCGGAGTCCTGGCTGGCTGAGGGAATaGACACTGAAAGGTGCCCGGAGACCCTGGCACCCG +
Preference number: 6 (lower is better)
Translates to: TAGLRSPGWLRE*TLKGARRPWHP
Trigger: CGGGTGCCAGGGTCTCCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCCGCAGCGGCAACTGCTGGGTTGCGGAGTCCTGGCTaGCTGAGGGAATGGACACTGAAAGGTGCCCGGAGA +
Preference number: 6 (lower is better)
Translates to: AAAATAGLRSPG*LREWTLKGARR
Trigger: TCTCCGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TGTGGCCGCAGCGGCAACTGCTGGGTTGCGGAGTCCTaGCTGGCTGAGGGAATGGACACTGAAAGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: CGRSGNCWVAES*LAEGMDTERCP
Trigger: CGGGCACCTTTCAGTGTCCATTCCCTCAGCCAGCCAGGACTCCGCAACCCAGCAGTTGCCGCTGCGGCCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000439576.7
ENST00000558207.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TGCAGCTGCTCAGGCGTGGCAATGATGGCACTGTTCTaGAGGCAGGCCCGCTGCGCCCTGTCAAAGTCGAGG +
Preference number: 6 (lower is better)
Translates to: CSCSGVAMMALF*RQARCALSKSR
Trigger: CCTCGACTTTGACAGGGCGCAGCGGGCCTGCCTGCAGAACAGTGCCATCATTGCCACGCCTGAGCAGCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp GGCCAGCCGGGCACCCAGCCGCCGGCACTCATTGGCTaGTTCCTGGAAGGTGAACTTCTCTGGAGATGTTGC +
Preference number: 6 (lower is better)
Translates to: GQPGTQPPALIG*FLEGELLWRCC
Trigger: GCAACATCTCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCTGGGTGCCCGGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CCCAGAATCTTCTCTGCTGGCCTCAGGGGCGGCAGATaGCCCGAACCCAGCTTCAGGATAGGCGGACGTCTC +
Preference number: 6 (lower is better)
Translates to: PRIFSAGLRGGR*PEPSFRIGGRL
Trigger: GAGACGTCCGCCTATCCTGAAGCTGGGTTCGGGGCATCTGCCGCCCCTGAGGCCAGCAGAGAAGATTCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCATACCGGTCCTTCTTCTGCCCGAAGGTCCTGGCATaGTCCACCACAGGGGGCTCTCCGCAGGCCACTGTG +
Preference number: 6 (lower is better)
Translates to: SYRSFFCPKVLA*STTGGSPQATV
Trigger: CACAGTGGCCTGCGGAGAGCCCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000439576.7
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CGTCTGGTTAGGGTAGAGGTAGACCGTTCTCACGCCTaGCTTGTCCCCACCGCAGGCAGGCCTTGGGGTGAC +
Preference number: 6 (lower is better)
Translates to: RLVRVEVDRSHA*LVPTAGRPWGD
Trigger: GTCACCCCAAGGCCTGCCTGCGGTGGGGACAAGCCAGGCGTGAGAACGGTCTACCTCTACCCTAACCAGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TGCAGGGCGCTGGGTCTGCTGGGTCCACTCAGACTCTaGGATGCTGGTGCTGATGACAACGCCCAGCTGCGA +
Preference number: 6 (lower is better)
Translates to: CRALGLLGPLRL*DAGADDNAQLR
Trigger: TCGCAGCTGGGCGTTGTCATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 72 bp GTGGTGGCCAGCCGGGCACCCAGCCGCCGGCACTCATaGGCTGCTTCCTGGAAGGTGAACTTCTCTGGAGAT +
Preference number: 6 (lower is better)
Translates to: VVASRAPSRRHS*AASWKVNFSGD
Trigger: ATCTCCAGAGAAGTTCACCTTCCAGGAAGCAGCCAATGAGTGCCGGCGGCTGGGTGCCCGGCTGGCCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp GGTGGCGTCACTGGGGATGGCCGGGTAGTTGGGCAGTaGGACCTTGTCCTGATAGGCACTGTTGACCCGCAC +
Preference number: 6 (lower is better)
Translates to: GGVTGDGRVVGQ*DLVLIGTVDPH
Trigger: GTGCGGGTCAACAGTGCCTATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCACCACGACTTCCAGGGTGGCCTCGCTGTCCTCGATaGCATGCATCACCTCGCAGCGGTAGACCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: SPRLPGWPRCPR*HASPRSGRPQS
Trigger: ACTCTGGGGTCTACCGCTGCGAGGTGATGCATGGCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CTTGGACACACGGCTCCACTTGATTCTTGGGGCCAGTaGGGCGGTAGAAGGGGCGGTGGTCACAGGGTGCAT +
Preference number: 6 (lower is better)
Translates to: LGHTAPLDSWGQ*GGRRGGGHRVH
Trigger: ATGCACCCTGTGACCACCGCCCCTTCTACCGCCCCACTGGCCCCAAGAATCAAGTGGAGCCGTGTGTCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TGGAGCGCAGGCTCTGGACTTCCAAGGTGGCGTCACTaGGGATGGCCGGGTAGTTGGGCAGTGAGACCTTGT +
Preference number: 6 (lower is better)
Translates to: WSAGSGLPRWRH*GWPGSWAVRPC
Trigger: ACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CAGAGTCATTGGAGCGCAGGCTCTGGACTTCCAAGGTaGCGTCACTGGGGATGGCCGGGTAGTTGGGCAGTG +
Preference number: 6 (lower is better)
Translates to: QSHWSAGSGLPR*RHWGWPGSWAV
Trigger: CACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATGACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TCGGAAGCAGAAGGCATGGTGCCGGGACAGTGGGTCTaGGAGGCCCGTCTGGTTAGGGTAGAGGTAGACCGT +
Preference number: 6 (lower is better)
Translates to: SEAEGMVPGQWV*EARLVRVEVDR
Trigger: ACGGTCTACCTCTACCCTAACCAGACGGGCCTCCCAGACCCACTGTCCCGGCACCATGCCTTCTGCTTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp AGCCTGGTGCCTCTGTCCCCACATCACTGGTGGTGGTaGATTCTCCACTCACTTCTGGGGCAGCGGACGCCT +
Preference number: 6 (lower is better)
Translates to: SLVPLSPHHWWW*ILHSLLGQRTP
Trigger: AGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTGGTaGTGGATTCTCCACTCACTTCTGGGGCAGCGGACG +
Preference number: 6 (lower is better)
Translates to: ASLVPLSPHHWW*WILHSLLGQRT
Trigger: CGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp AGTTGGGCAGTGAGACCTTGTCCTGATAGGCACTGTTaGCCCGCACGCGCCCTTCAGTGGCCACCAGCAGCA +
Preference number: 6 (lower is better)
Translates to: SWAVRPCPDRHC*PARALQWPPAA
Trigger: TGCTGCTGGTGGCCACTGAAGGGCGCGTGCGGGTCAACAGTGCCTATCAGGACAAGGTCTCACTGCCCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CGCACCAGGGAATTGATCTCATACCGGTCCTTCTTCTaGCCGAAGGTCCTGGCATGCTCCACCACAGGGGGC +
Preference number: 6 (lower is better)
Translates to: RTRELISYRSFF*PKVLACSTTGG
Trigger: GCCCCCTGTGGTGGAGCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCCTCCGAGGGTGCCGTGAGCTCCGCTTCTGTAGTCTaGGTTTGTAGGTGGTGGCCTGTGCTCAGCGAGATG +
Preference number: 6 (lower is better)
Translates to: SSEGAVSSASVV*VCRWWPVLSEM
Trigger: CATCTCGCTGAGCACAGGCCACCACCTACAAACGCAGACTACAGAAGCGGAGCTCACGGCACCCTCGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558704.1
CDS CCA 72 bp GCAGGCTCTGGACTTCCAAGGTGGCGTCACTGGGGATaGCCGGGTAGTTGGGCAGTGAGACCTTGTCCTGAT +
Preference number: 6 (lower is better)
Translates to: AGSGLPRWRHWG*PGSWAVRPCPD
Trigger: ATCAGGACAAGGTCTCACTGCCCAACTACCCGGCCATCCCCAGTGACGCCACCTTGGAAGTCCAGAGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CATGCATCACCTCGCAGCGGTAGACCCCAGAGTCATTaGAGCGCAGGCTCTGGACTTCCAAGGTGGCGTCAC +
Preference number: 6 (lower is better)
Translates to: HASPRSGRPQSH*SAGSGLPRWRH
Trigger: GTGACGCCACCTTGGAAGTCCAGAGCCTGCGCTCCAATGACTCTGGGGTCTACCGCTGCGAGGTGATGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCCTCGGGCTTCACCCTCAGTGATGTTTCGAGGCAGTaGCAGCTCCATGTCAGGCCAGGTCACTGTCTGGAC +
Preference number: 6 (lower is better)
Translates to: ASGFTLSDVSRQ*QLHVRPGHCLD
Trigger: GTCCAGACAGTGACCTGGCCTGACATGGAGCTGCCACTGCCTCGAAACATCACTGAGGGTGAAGCCCGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp AAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTGGTaGTGGTGGATTCTCCACTCACTTCTGGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: KASLVPLSPHHW*WWILHSLLGQR
Trigger: CCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CCACTCACTTCTGGGGCAGCGGACGCCTCGCCTTCTTaGAATGTCAAAGTGCTGCCGCTCACTCCTAGGCCA +
Preference number: 6 (lower is better)
Translates to: PLTSGAADASPS*NVKVLPLTPRP
Trigger: TGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp GGCATGCTCCACCACAGGGGGCTCTCCGCAGGCCACTaGGGGGCAAACACCCTTTATAAAGGGTCTCATAGG +
Preference number: 6 (lower is better)
Translates to: GMLHHRGLSAGH*GANTLYKGSHR
Trigger: CCTATGAGACCCTTTATAAAGGGTGTTTGCCCCTCAGTGGCCTGCGGAGAGCCCCCTGTGGTGGAGCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000558604.1
CDS GCA 72 bp CGATCCACTCCTCCACACCAGAGGGTGATGTGGGTGTaGCACCCTCTTCTTCTCCTGGAGAAGGAACCGCTG +
Preference number: 6 (lower is better)
Translates to: RSTPPHQRVMWV*HPLLLLEKEPL
Trigger: CAGCGGTTCCTTCTCCAGGAGAAGAAGAGGGTGGCACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CTGAAGGCAAGCCTGGTGCCTCTGTCCCCACATCACTaGTGGTGGTGGATTCTCCACTCACTTCTGGGGCAG +
Preference number: 6 (lower is better)
Translates to: LKASLVPLSPHH*WWWILHSLLGQ
Trigger: CTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GTGGGCATGTGGCGCTGGACAAACCCCTCTGTGCACTaGTACCGCACCAGGGAATTGATCTCATACCGGTCC +
Preference number: 6 (lower is better)
Translates to: VGMWRWTNPSVH*YRTRELISYRS
Trigger: GGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCCAGCGCCACATGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp TGGCGCTGGACAAACCCCTCTGTGCACTGGTACCGCACCAGGGAATaGATCTCATACCGGTCCTTCTTCTGCCCGAAGGTCCTGGCATGC +
Preference number: 6 (lower is better)
Translates to: WRWTNPSVHWYRTRE*ISYRSFFCPKVLAC
Trigger: GCATGCCAGGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGTCCAGCGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CCAGGAGGACCCTCAGCGGGGACGGTTGGGGGATGCTaGCACTCAGCGAGTTGTCATGGTCTGAAGTTTCTA +
Preference number: 6 (lower is better)
Translates to: PGGPSAGTVGGC*HSASCHGLKFL
Trigger: TAGAAACTTCAGACCATGACAACTCGCTGAGTGTCAGCATCCCCCAACCGTCCCCGCTGAGGGTCCTCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CACTTGGGTCACGATCCACTCCTCCACACCAGAGGGTaGTGTGGGTGTGCCACCCTCTTCTTCTCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: HLGHDPLLHTRG*CGCATLFFSWR
Trigger: TCTCCAGGAGAAGAAGAGGGTGGCACACCCACATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp GCAGTCCACTTGCCCTGTCCCCTGACAGCTGCCCACTaGAGTCAAGGTGTCCTGAAACATCTCCACTGCCTG +
Preference number: 6 (lower is better)
Translates to: AVHLPCPLTAAH*SQGVLKHLHCL
Trigger: CAGGCAGTGGAGATGTTTCAGGACACCTTGACTTCAGTGGGCAGCTGTCAGGGGACAGGGCAAGTGGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp GATTTCAGTCCTGTCTCCAGAAGCCGTGGGAGTGGCTaGAGGCAAGCCTGGTGCCTCTGTCCCCACATCACT +
Preference number: 6 (lower is better)
Translates to: DFSPVSRSRGSG*RQAWCLCPHIT
Trigger: AGTGATGTGGGGACAGAGGCACCAGGCTTGCCTTCAGCCACTCCCACGGCTTCTGGAGACAGGACTGAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp GTCCTCTCCAGACAAAAGGGGCTGTTGGAGCCGAAGTaGGGCTGCATACCTCGGAAGCAGAAGGCATGGTGC +
Preference number: 6 (lower is better)
Translates to: VLSRQKGLLEPK*GCIPRKQKAWC
Trigger: GCACCATGCCTTCTGCTTCCGAGGTATGCAGCCTCACTTCGGCTCCAACAGCCCCTTTTGTCTGGAGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS GCA 72 bp GGGCAGCGGACGCCTCGCCTTCTTGAAATGTCAAAGTaGTGCCGCTCACTCCTAGGCCAGAGGATCTCTCAA +
Preference number: 6 (lower is better)
Translates to: GQRTPRLLEMSK*CRSLLGQRISQ
Trigger: TTGAGAGATCCTCTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCCGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp TCAATTTCTAGATGCGTCTCTGCAGGGCGCTGGGTCTaGTGGGTCCACTCAGACTCTGGGATGCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SISRCVSAGRWV*WVHSDSGMLVL
Trigger: CAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp AATGGAACACGATGCCTTTCACCACGACTTCCAGGGTaGCCTCGCTGTCCTCGATGCCATGCATCACCTCGC +
Preference number: 6 (lower is better)
Translates to: NGTRCLSPRLPG*PRCPRCHASPR
Trigger: GCGAGGTGATGCATGGCATCGAGGACAGCGAGGCCACCCTGGAAGTCGTGGTGAAAGGCATCGTGTTCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TCTTCTACGGGGACAGCAGCCACACCAGGAACCACTTaGGTCACGATCCACTCCTCCACACCAGAGGGTGAT +
Preference number: 6 (lower is better)
Translates to: SSTGTAATPGTT*VTIHSSTPEGD
Trigger: ATCACCCTCTGGTGTGGAGGAGTGGATCGTGACCCAAGTGGTTCCTGGTGTGGCTGCTGTCCCCGTAGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp ATTTCTAGATGCGTCTCTGCAGGGCGCTGGGTCTGCTaGGTCCACTCAGACTCTGGGATGCTGGTGCTGATG +
Preference number: 6 (lower is better)
Translates to: ISRCVSAGRWVC*VHSDSGMLVLM
Trigger: CATCAGCACCAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GAGGACTCAATTTCTAGATGCGTCTCTGCAGGGCGCTaGGTCTGCTGGGTCCACTCAGACTCTGGGATGCTG +
Preference number: 6 (lower is better)
Translates to: EDSISRCVSAGR*VCWVHSDSGML
Trigger: CAGCATCCCAGAGTCTGAGTGGACCCAGCAGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp ATGCTGGTGCTGATGACAACGCCCAGCTGCGAGGTGTaGCCAGACAGGTCTCCGCTGATTTCAGTCCTGTCT +
Preference number: 6 (lower is better)
Translates to: MLVLMTTPSCEV*PDRSPLISVLS
Trigger: AGACAGGACTGAAATCAGCGGAGACCTGTCTGGTCACACCTCGCAGCTGGGCGTTGTCATCAGCACCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CAAACCCCTCTGTGCACTGGTACCGCACCAGGGAATTaGTCTCATACCGGTCCTTCTTCTGCCCGAAGGTCC +
Preference number: 6 (lower is better)
Translates to: QTPLCTGTAPGN*SHTGPSSARRS
Trigger: GGACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp TGGCTCTGCCCCAGAGGGACTGACATTTTCTTGCTCTaGTGGATGGGATACTGGGTGGTGGCAGGATCCGGT +
Preference number: 6 (lower is better)
Translates to: WLCPRGTDIFLL*WMGYWVVAGSG
Trigger: ACCGGATCCTGCCACCACCCAGTATCCCATCCATCAGAGCAAGAAAATGTCAGTCCCTCTGGGGCAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 72 bp TCTCATAGGGTCTCCTGGGATGACCTATGCTGGTTGTaGCCCGAGGCACTGTGGGGGACACAGCCTCAACAT +
Preference number: 6 (lower is better)
Translates to: SHRVSWDDLCWL*PEALWGTQPQH
Trigger: ATGTTGAGGCTGTGTCCCCCACAGTGCCTCGGGTCACAACCAGCATAGGTCATCCCAGGAGACCCTATGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000558604.1
CDS GCA 72 bp GTCCAGCTCACTGGAGGGCAGTCCAGATATTTCTCCTaGACCACTGATGCCAATGGTTCCCCTCCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: VQLTGGQSRYFS*TTDANGSPPFQ
Trigger: CTGGAAGGGAGGGGAACCATTGGCATCAGTGGTGCAGGAGAAATATCTGGACTGCCCTCCAGTGAGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CAGCGGACGCCTCGCCTTCTTGAAATGTCAAAGTGCTaGCGCTCACTCCTAGGCCAGAGGATCTCTCAAGGT +
Preference number: 6 (lower is better)
Translates to: QRTPRLLEMSKC*RSLLGQRISQG
Trigger: ACCTTGAGAGATCCTCTGGCCTAGGAGTGAGCGGCAGCACTTTGACATTTCAAGAAGGCGAGGCGTCCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp AGTAGGAAGGATCCCTGGCAGCGGGGATGTGCCCACTaGGGTATAGGCTGGTTCCCATTCTGTCTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: SRKDPWQRGCAH*GIGWFPFCLVF
Trigger: GAAAACCAGACAGAATGGGAACCAGCCTATACCCCAGTGGGCACATCCCCGCTGCCAGGGATCCTTCCTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCCCCAGAGGGACTGACATTTTCTTGCTCTGATGGATaGGATACTGGGTGGTGGCAGGATCCGGTGAACCCA +
Preference number: 6 (lower is better)
Translates to: APEGLTFSCSDG*DTGWWQDPVNP
Trigger: TGGGTTCACCGGATCCTGCCACCACCCAGTATCCCATCCATCAGAGCAAGAAAATGTCAGTCCCTCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 72 bp TCTGTCTACAAAGCAGTAGACATCGTAGGTCTCTGTTaGTGGGCGCACGCCATAGGTCCTGACCCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SVYKAVDIVGLC*WAHAIGPDPWA
Trigger: AGCCCAGGGGTCAGGACCTATGGCGTGCGCCCATCAACAGAGACCTACGATGTCTACTGCTTTGTAGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp AAACTGTCCACTGACATCCACCATCCCAGATTTGCCTaGCAGATCTGCCTCTCCGGAAGGGAGGCCACTGAG +
Preference number: 6 (lower is better)
Translates to: KLSTDIHHPRFA*QICLSGREATE
Trigger: CTCAGTGGCCTCCCTTCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGATGTCAGTGGACAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp GATTCACAGAACTCCAGTGCTTCCTGGAAGGTGAACTaGTCAAGGCGTGTGGCGAAGAACACCTCCCCCTCA +
Preference number: 6 (lower is better)
Translates to: DSQNSSASWKVN*SRRVAKNTSPS
Trigger: TGAGGGGGAGGTGTTCTTCGCCACACGCCTTGAGCAGTTCACCTTCCAGGAAGCACTGGAGTTCTGTGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CACATCACTGGTGGTGGTGGATTCTCCACTCACTTCTaGGGCAGCGGACGCCTCGCCTTCTTGAAATGTCAA +
Preference number: 6 (lower is better)
Translates to: HITGGGGFSTHF*GSGRLAFLKCQ
Trigger: TTGACATTTCAAGAAGGCGAGGCGTCCGCTGCCCCAGAAGTGAGTGGAGAATCCACCACCACCAGTGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CCGGAGAAGCTGGGATGGAAGCATCTGTTGGGGAGGTaGCTGTTTCGACTGTGTGAGTCTCTTCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: PEKLGWKHLLGR*LFRLCESLLLS
Trigger: ACTCAGGAGAAGAGACTCACACAGTCGAAACAGCCACCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp CTGACATTTTCTTGCTCTGATGGATGGGATACTGGGTaGTGGCAGGATCCGGTGAACCCAGTGGGGTCCTCT +
Preference number: 6 (lower is better)
Translates to: LTFSCSDGWDTG*WQDPVNPVGSS
Trigger: AGAGGACCCCACTGGGTTCACCGGATCCTGCCACCACCCAGTATCCCATCCATCAGAGCAAGAAAATGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS CAA 72 bp CCAGAAAACTGTCCACTGACATCCACCATCCCAGATTaGCCTGACAGATCTGCCTCTCCGGAAGGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: PENCPLTSTIPD*PDRSASPEGRP
Trigger: TGGCCTCCCTTCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 72 bp ACAAACCCCTCTGTGCACTGGTACCGCACCAGGGAATaGATCTCATACCGGTCCTTCTTCTGCCCGAAGGTC +
Preference number: 6 (lower is better)
Translates to: TNPSVHWYRTRE*ISYRSFFCPKV
Trigger: GACCTTCGGGCAGAAGAAGGACCGGTATGAGATCAATTCCCTGGTGCGGTACCAGTGCACAGAGGGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000439576.7
ENST00000558604.1
ENST00000558704.1
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp TCGACTGTTCCAGAAAACTGTCCACTGACATCCACCATCCCAGATTaGCCTGACAGATCTGCCTCTCCGGAAGGGAGGCCACTGAGTTCC +
Preference number: 6 (lower is better)
Translates to: STVPENCPLTSTIPD*PDRSASPEGRPLSS
Trigger: GGAACTCAGTGGCCTCCCTTCCGGAGAGGCAGATCTGTCAGGCAAATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTGGAACAGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp AGGAGACCCAGATGCTTGGCCACTGAGTTCAGTTCCTaGAGGGAGTCCACTAGCTCTCCCACTAATGTCCAG +
Preference number: 6 (lower is better)
Translates to: RRPRCLATEFSS*RESTSSPTNVQ
Trigger: CTGGACATTAGTGGGAGAGCTAGTGGACTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CCCCAGACATGTCTGGTGCTCCAGAATGAGCACCACTaGGTTCTAAAATGCCAGAAGGCCCTTCTCCTGCCT +
Preference number: 6 (lower is better)
Translates to: PQTCLVLQNEHH*VLKCQKALLLP
Trigger: AGGCAGGAGAAGGGCCTTCTGGCATTTTAGAACTCAGTGGTGCTCATTCTGGAGCACCAGACATGTCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp AGTGGGGAAACTAGATGGAGTTCCACTGCCATAATATaGTCCCGAGGGCAGGCTGCTCCCAATCTCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SGETRWSSTAII*SRGQAAPNLSS
Trigger: AGAGCTGAGATTGGGAGCAGCCTGCCCTCGGGAGCATATTATGGCAGTGGAACTCCATCTAGTTTCCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TCTCCTCGGCGAAGCAGTACACATCATAGGTCTCGTTaGTGTCTCGGATGCCATACGTCCTCACACCAGGAA +
Preference number: 6 (lower is better)
Translates to: SPRRSSTHHRSR*CLGCHTSSHQE
Trigger: TTCCTGGTGTGAGGACGTATGGCATCCGAGACACCAACGAGACCTATGATGTGTACTGCTTCGCCGAGGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp TGGCTGTTTCGACTGTGTGAGTCTCTTCTCCTGAGTACAGGAGGCTaGAGGACTCAATTTCTAGATGCGTCTCTGCAGGGCGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: WLFRLCESLLLSTGG*RTQFLDASLQGAGS
Trigger: AGACCCAGCGCCCTGCAGAGACGCATCTAGAAATTGAGTCCTCAAGCCTCCTGTACTCAGGAGAAGAGACTCACACAGTCGAAACAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GGTATTTCCCCACTGACATCAGGAGACCCAGATGCTTaGCCACTGAGTTCAGTTCCTGAAGGGAGTCCACTA +
Preference number: 6 (lower is better)
Translates to: GISPLTSGDPDA*PLSSVPEGSPL
Trigger: TAGTGGACTCCCTTCAGGAACTGAACTCAGTGGCCAAGCATCTGGGTCTCCTGATGTCAGTGGGGAAATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TTTCCATTCCGGAGAAGCTGGGATGGAAGCATCTGTTaGGGAGGTGGCTGTTTCGACTGTGTGAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: FPFRRSWDGSIC*GGGCFDCVSLF
Trigger: GAAGAGACTCACACAGTCGAAACAGCCACCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp CTTGTTTCTGGAGCTTGCCCACTTCCTAGAGTTCCAGAAGGCAGTTaGCCCAAGTCCAAGTCTCCAGAAGCTGACCCCACCAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: LVSGACPLPRVPEGS*PKSKSPEADPTKSS
Trigger: AGAAGACTTGGTGGGGTCAGCTTCTGGAGACTTGGACTTGGGCAAACTGCCTTCTGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp CTGATTCACGTTTCCATTCCGGAGAAGCTGGGATGGAAGCATCTGTaGGGGAGGTGGCTGTTTCGACTGTGTGAGTCTCTTCTCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LIHVSIPEKLGWKHL*GRWLFRLCESLLLS
Trigger: ACTCAGGAGAAGAGACTCACACAGTCGAAACAGCCACCTCCCCAACAGATGCTTCCATCCCAGCTTCTCCGGAATGGAAACGTGAATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS TCA 72 bp CACTCCAGATGTTTCCCCACTAGTGTCAGGAAACCCTaGTGGCTGTCCACTGACACCAAAGAGTCCAGGTAT +
Preference number: 6 (lower is better)
Translates to: HSRCFPTSVRKP*WLSTDTKESRY
Trigger: ATACCTGGACTCTTTGGTGTCAGTGGACAGCCATCAGGGTTTCCTGACACTAGTGGGGAAACATCTGGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp CTAAATCCAGAGGGAAGACCACTTGTTTCTGGAGCTTaGCCACTTCCTAGAGTTCCAGAAGGCAGTTTGCCC +
Preference number: 6 (lower is better)
Translates to: LNPEGRPLVSGA*PLPRVPEGSLP
Trigger: GGGCAAACTGCCTTCTGGAACTCTAGGAAGTGGGCAAGCTCCAGAAACAAGTGGTCTTCCCTCTGGATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCCATAAAGAACTCCAGATGCTTCTCCACTAATACCTaGTTGTCCAGAGGACAGCCCGCTAAGCTCAGTCAC +
Preference number: 6 (lower is better)
Translates to: AIKNSRCFSTNT*LSRGQPAKLSH
Trigger: GTGACTGAGCTTAGCGGGCTGTCCTCTGGACAACCAGGTATTAGTGGAGAAGCATCTGGAGTTCTTTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp GCTATGCCACTTGGTAGGCCACTGAATTCCGGAGTCTaGGATGTAAACCCACTGGAATCGACTGTTCCAGAA +
Preference number: 6 (lower is better)
Translates to: AMPLGRPLNSGV*DVNPLESTVPE
Trigger: TTCTGGAACAGTCGATTCCAGTGGGTTTACATCCCAGACTCCGGAATTCAGTGGCCTACCAAGTGGCATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp TTGTCTCTGGGGAACTTTAGAAGGATGACCTTGCCTTaGGGTCAAAGCCTGCGTTGTGCTGGTTTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: LSLGNFRRMTLP*GQSLRCAGFRA
Trigger: AGCTCTGAAACCAGCACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAAGTTCCCCAGAGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS CAA 72 bp CTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCTaGCCTTGGGGTCAAAGCCTGCGTTGTGCTGGTTTC +
Preference number: 6 (lower is better)
Translates to: LYLSLGNFRRMT*PWGQSLRCAGF
Trigger: GAAACCAGCACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5
CDS TCA 72 bp ACCCACTGGAATCGACTGTTCCAGAAAACTGTCCACTaGCATCCACCATCCCAGATTTGCCTGACAGATCTG +
Preference number: 6 (lower is better)
Translates to: THWNRLFQKTVH*HPPSQICLTDL
Trigger: CAGATCTGTCAGGCAAATCTGGGATGGTGGATGTCAGTGGACAGTTTTCTGGAACAGTCGATTCCAGTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS GCA 72 bp AGCAGTACACATCATAGGTCTCGTTGGTGTCTCGGATaGCATACGTCCTCACACCAGGAAACTCATCCTTGT +
Preference number: 6 (lower is better)
Translates to: SSTHHRSRWCLG*HTSSHQETHPC
Trigger: ACAAGGATGAGTTTCCTGGTGTGAGGACGTATGGCATCCGAGACACCAACGAGACCTATGATGTGTACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000558207.5
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CCA 72 bp AGTTCTGTCTACAAGAGAGACAGTGGGGAAACTAGATaGAGTTCCACTGCCATAATATGCTCCCGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SSVYKRDSGETR*SSTAIICSRGQ
Trigger: CTGCCCTCGGGAGCATATTATGGCAGTGGAACTCCATCTAGTTTCCCCACTGTCTCTCTTGTAGACAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352105.11
ENST00000439576.7
ENST00000559004.5
ENST00000560601.4
ENST00000561243.7
CDS CAA 90 bp CTTATTTATCTCTACTTGTCTCTGGGGAACTTTAGAAGGATGACCTaGCCTTGGGGTCAAAGCCTGCGTTGTGCTGGTTTCAGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: LIYLYLSLGNFRRMT*PWGQSLRCAGFRAG
Trigger: GCCAGCTCTGAAACCAGCACAACGCAGGCTTTGACCCCAAGGCAAGGTCATCCTTCTAAAGTTCCCCAGAGACAAGTAGAGATAAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558207.5