RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACADSB (Homo sapiens)

Ensembl gene IDs: ENSG00000196177

Ensembl transcript IDs: ENST00000358776.7, ENST00000368869.8, ENST00000411816.2, ENST00000541070.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCTCAGAATTCCCATGTGTTGTGGGAGGGACCCGGGGGAGGTAATTaGATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTA +
Preference number: 1 (lower is better)
Translates to: SQNSHVLWEGPGGGN*IMGASLSCAILVIV
Trigger: TACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAATTACCTCCCCCGGGTCCCTCCCACAACACATGGGAATTCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CCA 90 bp GGGCCCTGTTACCCTTTTGTGTTGGCCAATTTCTCCCATTTGGAATaGCTGTATTTACCCAATACCTGTACCCCCATTGTATCTAGGAAG +
Preference number: 1 (lower is better)
Translates to: GPCYPFVLANFSHLE*LYLPNTCTPIVSRK
Trigger: CTTCCTAGATACAATGGGGGTACAGGTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTAACAGGGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CCA 90 bp TGCATGGGCCCTGTTACCCTTTTGTGTTGGCCAATTTCTCCCATTTaGAATGGCTGTATTTACCCAATACCTGTACCCCCATTGTATCTA +
Preference number: 1 (lower is better)
Translates to: CMGPVTLLCWPISPI*NGCIYPIPVPPLYL
Trigger: TAGATACAATGGGGGTACAGGTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTAACAGGGCCCATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CCA 90 bp TTAGCAAAGAGACTGGCAGCATCTTTCCCTTGCCTTAGAGATTTGTaGAACTTCGAACTTGAGAGAGATGATTGTGAGACGTGGAGTCAA +
Preference number: 1 (lower is better)
Translates to: LAKRLAASFPCLRDL*NFELERDDCETWSQ
Trigger: TTGACTCCACGTCTCACAATCATCTCTCTCAAGTTCGAAGTTCCACAAATCTCTAAGGCAAGGGAAAGATGCTGCCAGTCTCTTTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR GCA 90 bp ATTCTATGGGAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTaGTCCATTATCTGTAAAGTCCACCTCTTTCACATAATCGCAGAA +
Preference number: 1 (lower is better)
Translates to: ILWEEVGIPFTNVGF*SIICKVHLFHIIAE
Trigger: TTCTGCGATTATGTGAAAGAGGTGGACTTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTCCCATAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 90 bp GACTGCCCTGCTGAATTTTGGACTTGCATGGGCCCTGTTACCCTTTaGTGTTGGCCAATTTCTCCCATTTGGAATGGCTGTATTTACCCA +
Preference number: 2 (lower is better)
Translates to: DCPAEFWTCMGPVTL*CWPISPIWNGCIYP
Trigger: TGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTAACAGGGCCCATGCAAGTCCAAAATTCAGCAGGGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 90 bp TTGCATGGGCCCTGTTACCCTTTTGTGTTGGCCAATTTCTCCCATTaGGAATGGCTGTATTTACCCAATACCTGTACCCCCATTGTATCT +
Preference number: 2 (lower is better)
Translates to: LHGPCYPFVLANFSH*EWLYLPNTCTPIVS
Trigger: AGATACAATGGGGGTACAGGTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTAACAGGGCCCATGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 90 bp GTTTTAGCAAAGAGACTGGCAGCATCTTTCCCTTGCCTTAGAGATTaGTGGAACTTCGAACTTGAGAGAGATGATTGTGAGACGTGGAGT +
Preference number: 2 (lower is better)
Translates to: VLAKRLAASFPCLRD*WNFELERDDCETWS
Trigger: ACTCCACGTCTCACAATCATCTCTCTCAAGTTCGAAGTTCCACAAATCTCTAAGGCAAGGGAAAGATGCTGCCAGTCTCTTTGCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 90 bp GCCAAAAATATGAAAGCAAGTTTGGAACTGGGTAACAGGCAGAGGTaGGAACAGTTTGAAGGGCTCAGAAGAAGACAGGAAAATGTGGGA +
Preference number: 2 (lower is better)
Translates to: AKNMKASLELGNRQR*EQFEGLRRRQENVG
Trigger: TCCCACATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAACTTGCTTTCATATTTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTATGCCCTGCTGAATTTTaGACTTGCATGGGCCCTGTT +
Preference number: 2 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLCPAEF*TCMGPV
Trigger: AACAGGGCCCATGCAAGTCCAAAATTCAGCAGGGCA...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR TCA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACCTGAAAAATAGTGCATaGCAGAATATCCAACACTGT +
Preference number: 2 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHLKNSA*QNIQHC
Trigger: ACAGTGTTGGATATTCTGTCATGCACTATTTTTCAG...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR TCA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGGTGCCAGGGGTAGAATaGTATGGTTTGGCTGTGTCC +
Preference number: 2 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQVPGVE*YGLAVS
Trigger: GGACACAGCCAAACCATATCATTCTACCCCTGGCAC...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR GCA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAACCGCCATGTAAGAAGTaGTTTTTGCCTCCCACCATG +
Preference number: 2 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKPPCKK*FLPPTM
Trigger: CATGGTGGGAGGCAAAAAGCACTTCTTACATGGCGG...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR TCA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAAGGGGTCTCTTCTGACTaGGAATCCCTAATACTGAAG +
Preference number: 2 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKGVSSD*ESLILK
Trigger: CTTCAGTATTAGGGATTCTCAGTCAGAAGAGACCCC...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR GCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATGCAGCATCTTTCCCTTaGCTTAGAGATTTGTGGAAC +
Preference number: 2 (lower is better)
Translates to: WVFIISPFESQVSFISSDAASFP*LRDLWN
Trigger: GTTCCACAAATCTCTAAGGCAAGGGAAAGATGCTGC...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 90 bp GAAGAAGACAGGAAAATGTGGGAAAGTTTGGAACTTCCTAGATACTaGCTGAATGGCTTTGCCCAAAATGCTGATAGCAATATTGACAAT +
Preference number: 2 (lower is better)
Translates to: EEDRKMWESLELPRY*LNGFAQNADSNIDN
Trigger: ATTGTCAATATTGCTATCAGCATTTTGGGCAAAGCCATTCAGCAAGTATCTAGGAAGTTCCAAACTTTCCCACATTTTCCTGTCTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR TCA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCCTCCCTCATTCCTTATaGGATTTTGATACACTTCTT +
Preference number: 2 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSLPHSL*DFDTLL
Trigger: AAGAAGTGTATCAAAATCTCATAAGGAATGAGGGAG...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAAATATTCGAATGCTGTaGAAGTTTATTCCCACGCAA +
Preference number: 2 (lower is better)
Translates to: PKFKSGSPVPKLNSLKRENIRML*KFIPTQ
Trigger: TTGCGTGGGAATAAACTTCCACAGCATTCGAATATT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
3UTR-3UTR TCA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAAACGTGGAGTCAAAGGTaGTCATTTTGGAGGTTTAAA +
Preference number: 2 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKTWSQR*SFWRFK
Trigger: TTTAAACCTCCAAAATGATCACCTTTGACTCCACGT...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CCA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAAGAAGACAGGAAAATGTaGGAAAGTTTGGAACTTCCT +
Preference number: 2 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKEDRKM*ESLELP
Trigger: AGGAAGTTCCAAACTTTCCCACATTTTCCTGTCTTC...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATAAATGTGGGAAAGTTTaGAACTTCCTAGATACTTGC +
Preference number: 2 (lower is better)
Translates to: WVFIISPFESQVSFISSDKCGKV*NFLDTC
Trigger: GCAAGTATCTAGGAAGTTCCAAACTTTCCCACATTT...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CCA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGAATATTCGAATGCTGTaGAAGTTTATTCCCACGCAA +
Preference number: 2 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQNIRML*KFIPTQ
Trigger: TTGCGTGGGAATAAACTTCCACAGCATTCGAATATT...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR TCA 72 bp TCCCATGTGTTGTGGGAGGGACCCGGGGGAGGTAATTaGATCATGGGGGCCAGTCTTTCCTGTGCTATTCTC +
Preference number: 3 (lower is better)
Translates to: SHVLWEGPGGGN*IMGASLSCAIL
Trigger: GAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAATTACCTCCCCCGGGTCCCTCCCACAACACATGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR TCA 72 bp GAGGGGACTCAGGCCACACAGGGGGTCTCTTCTGACTaGGAATCCCTAATACTGAAGAAGTGGCATCACCAG +
Preference number: 3 (lower is better)
Translates to: EGTQATQGVSSD*ESLILKKWHHQ
Trigger: CTGGTGATGCCACTTCTTCAGTATTAGGGATTCTCAGTCAGAAGAGACCCCCTGTGTGGCCTGAGTCCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR GCA 72 bp CTTCTTCATTTTCTCTTGCCACCACCATGTACGAAGTaGTTTTCACCTCCCGCCATGATTCTGAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LLHFLLPPPCTK*FSPPAMILRPP
Trigger: GGGAGGCCTCAGAATCATGGCGGGAGGTGAAAAGCACTTCGTACATGGTGGTGGCAAGAGAAAATGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CCA 72 bp CAACTTGAATTTATCTTCTGGAATTCCCACATGTTGTaGGAGGGACCCAGGGGGAGGTCATCGAATCAGGGG +
Preference number: 3 (lower is better)
Translates to: QLEFIFWNSHML*EGPRGRSSNQG
Trigger: CCCCTGATTCGATGACCTCCCCCTGGGTCCCTCCCACAACATGTGGGAATTCCAGAAGATAAATTCAAGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CCA 72 bp TACCCTTTTGTGTTGGCCAATTTCTCCCATTTGGAATaGCTGTATTTACCCAATACCTGTACCCCCATTGTA +
Preference number: 3 (lower is better)
Translates to: YPFVLANFSHLE*LYLPNTCTPIV
Trigger: TACAATGGGGGTACAGGTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CAA 90 bp CCACTGAAATTGCAACTTGAATTTATCTTCTGGAATTCCCACATGTTGTGGGAGTGTAAGAAGTGCTTTTaGCCTCCCACCATGATTCTG +
Preference number: 3 (lower is better)
Translates to: PLKLQLEFIFWNSHMLWECKKCF*PPTMIL
Trigger: CAGAATCATGGTGGGAGGCAAAAAGCACTTCTTACA...CTCCCACAACATGTGGGAATTCCAGAAGATAAATTCAAGTTGCAATTTCAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CAA 90 bp CCACTGAAATTGCAACTTGAATTTATCTTCTGGAATTCCCACATGTTGTGGGAGGAGATGAAAAACTTTTaGGGAACTGGAGTAAAGGTG +
Preference number: 3 (lower is better)
Translates to: PLKLQLEFIFWNSHMLWEEMKNF*GTGVKV
Trigger: CACCTTTACTCCAGTTCCCAAAAAGTTTTTCATCTC...CTCCCACAACATGTGGGAATTCCAGAAGATAAATTCAAGTTGCAATTTCAGTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR TCA 72 bp CTGTGCTATTCTCATGATAGTAAGTCTCATGAGATCTaGTGGGTTTATCAGGGGTTTCCACTTTTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: LCYSHDSKSHEI*WVYQGFPLLLL
Trigger: AAGAAGCAAAAGTGGAAACCCCTGATAAACCCATCAGATCTCATGAGACTTACTATCATGAGAATAGCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CAA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAATGTTACCCTTTTGTGTaGGCCAATTTCTCCCATTTG +
Preference number: 3 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKCYPFV*ANFSHL
Trigger: CAAATGGGAGAAATTGGCCAACACAAAAGGGTAACA...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR-3UTR CAA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAAAATATGAAAGCAAGTTaGGAACTGGGTAACAGGCAG +
Preference number: 3 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKNMKAS*ELGNRQ
Trigger: CTGCCTGTTACCCAGTTCCAAACTTGCTTTCATATT...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR GCA 72 bp GTTTCTCATATAACAGTAATGATTATTCTAAGCAACTaGATGAGCCTTGGAAGATTCTTCATCTCTAACACA +
Preference number: 3 (lower is better)
Translates to: VSHITVMIILSN*MSLGRFFISNT
Trigger: TGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAATAATCATTACTGTTATATGAGAAAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CACTTTGGGAGGCCAAGGTGGGCGATATCCAGAAGCCAGAAGACCAGCCTGGGCTGGGAGGATGAGGCATaGGAATCACTGGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: HFGRPRWAISRSQKTSLGWEDEA*ESLEPR
Trigger: CCTGGGTTCCAGTGATTCTCATGCCTCATCCTCCCA...GCCCAGGCTGGTCTTCTGGCTTCTGGATATCGCCCACCTTGGCCTCCCAAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CACTTTGGGAGGCCAAGGTGGGCGATATCCAGAAGCCAGAAGACCAGCCTGGGCACCTGCTCCAGCCTCTaGAAGGCAGAAACTTCCTAC +
Preference number: 4 (lower is better)
Translates to: HFGRPRWAISRSQKTSLGTCSSL*KAETSY
Trigger: GTAGGAAGTTTCTGCCTTTCAGAGGCTGGAGCAGGT...GCCCAGGCTGGTCTTCTGGCTTCTGGATATCGCCCACCTTGGCCTCCCAAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTGCGCAGCAACCGCACTaGCAGGCCCTCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVAQQPH*QALHPR
Trigger: GCGAGGATGGAGGGCCTGGCAGTGCGGTTGCTGCGC...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACGCGCAGCAACCGCACTaGCAGGCCCTCCATCCTCGC +
Preference number: 4 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHAQQPH*QALHPR
Trigger: GCGAGGATGGAGGGCCTGGCAGTGCGGTTGCTGCGC...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTCAGCTTCCAGCTGGGTaGCCACGTGAGCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVQLPAG*PREPLG
Trigger: ACCAAGTGGCTCACGTGGCCACCCAGCTGGAAGCTG...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGTTCTTAGCAGCCTGCTaGCGCGCAGCAACCGCACTG +
Preference number: 4 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRFLAAC*RAATAL
Trigger: CAGTGCGGTTGCTGCGCGGCAGCAGGCTGCTAAGAA...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTCACCAGAAAGAGCCCTaGGTGCTCAGCACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRHQKEP*VLSTAD
Trigger: ATCAGCAGTGCTGAGCACGCAGGGCTCTTTCTGGTG...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACAGCTTCCAGCTGGGTaGCCACGTGAGCCACTTGGT +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQQLPAG*PREPLG
Trigger: ACCAAGTGGCTCACGTGGCCACCCAGCTGGAAGCTG...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTACCTGCTCCAGCCTCTaGAAGGCAGAAACTTCCTAC +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRTCSSL*KAETSY
Trigger: GTAGGAAGTTTCTGCCTTTCAGAGGCTGGAGCAGGT...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAAGCTGGGTGGCCACGTaGGCCACTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFESWVAT*ATWCWR
Trigger: CCTCCAACACCAAGTGGCTCACGTGGCCACCCAGCT...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTCACCAGAAAGAGCCCTaGGTGCTCAGCACTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVHQKEP*VLSTAD
Trigger: ATCAGCAGTGCTGAGCACGCAGGGCTCTTTCTGGTG...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTAACTTGGCAGTTGGGTaGAATCCAGTGCCACCCACA +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRNLAVG*NPVPPT
Trigger: TGTGGGTGGCACTGGATTCCACCCAACTGCCAAGTT...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTAAGCTGGGTGGCCACGTaGGCCACTTGGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLSWVAT*ATWCWR
Trigger: CCTCCAACACCAAGTGGCTCACGTGGCCACCCAGCT...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp AAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTCTGAGATCGCGCCACTaGACTCTAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: KANTRTLTKGFIKIFECCLRSRH*TLAWVT
Trigger: TGTCACCCAGGCTAGAGTGCAGTGGCGCGATCTCAG...ACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACACCAGGAGGTCAAGGCTaGAGTGAGCTGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTPGGQG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAGCCTTGACCTCCTGG...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAATTTCTTCTTAGCTGCTaGCGCGCAGCAACCGCACTG +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQFLLSC*RAATAL
Trigger: CAGTGCGGTTGCTGCGCGGCAGCAGCTAAGAAGAAA...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368869.8
CDS-3UTR TCA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACGTGCCAGGGGTAGAATaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDVPGVE*YGLAVS
Trigger: GGACACAGCCAAACCATATCATTCTACCCCTGGCAC...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTCAGTCCCAGCATCTGTaGAGCAATTCCTATTCTACC +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRQSQHL*SNSYST
Trigger: GGTAGAATAGGAATTGCTGCACAGATGCTGGGACTG...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAACTGAGATCGCGCCACTaGACTCTAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFELRSRH*TLAWVT
Trigger: TGTCACCCAGGCTAGAGTGCAGTGGCGCGATCTCAG...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCCCGCCATGTAAGAAGTaGTTTTTGCCTCCCACCATG +
Preference number: 4 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTPPCKK*FLPPTM
Trigger: CATGGTGGGAGGCAAAAAGCACTTCTTACATGGCGG...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACCGTGCTCAGCACTGCTaGTCCACATCTTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDRAQHC*STSLIH
Trigger: ATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACG...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAATCAGGTTTCCCTATATaGAGGCCCGGAGTATCACGA +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQSGFPI*RPGVSR
Trigger: TCGTGATACTCCGGGCCTTCATATAGGGAAACCTGA...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTAGGTGGAAGAAGCTCTaGGCCCCAATTTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVRWKKL*APICFQ
Trigger: CTGAAAACAAATTGGGGCTCAGAGCTTCTTCCACCT...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTACCCGGGGGAGGTAATTaGATCATGGGGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLPGGGN*IMGASL
Trigger: AAGACTGGCCCCCATGATTCAATTACCTCCCCCGGG...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCTTCTTCTTAGCAGCCTaGTGCCGCGCAGCAACCGCA +
Preference number: 4 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSFFLAA*CRAATA
Trigger: TGCGGTTGCTGCGCGGCAGCAGGCTGCTAAGAAGAA...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACGGTAGGGTCTACATTTaGCATCACCAGAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNGRVYI*HHQKEP
Trigger: GGGCTCTTTCTGGTGATGGCAAATGTAGACCCTACC...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTGCTGAGGCAAATAGGTaGCCTTTTGTTCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRAEANR*PFVLLF
Trigger: GAACAGAAGAACAAAAGGCCACCTATTTGCCTCAGC...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACTGCCCTGCTGAATTTTaGACTTGCATGGGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDCPAEF*TCMGPV
Trigger: AACAGGGCCCATGCAAGTCCAAAATTCAGCAGGGCA...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTGGCTTCTGGAACCTTaGCATTTTCGAATGTTAACG +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRWLLEP*HFRMLT
Trigger: CGTTAACATTCGAAAATGTCAAGGTTCCAGAAGCCA...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp GAAGAAGTTGGGATTCCTTTTACTAATGTTGGCTTCTGCTCCATTATCTGTAAACAGGCTTCAGGAGGCTaGTGGCTAGTTCTCCGCCAG +
Preference number: 4 (lower is better)
Translates to: EEVGIPFTNVGFCSIICKQASGG*WLVLRQ
Trigger: CTGGCGGAGAACTAGCCATCAGCCTCCTGAAGCCTG...TTTACAGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAATCCCAACTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAGAGGTAATTGAATCATaGGGGCCAGTCTTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQEVIES*GPVFPV
Trigger: CACAGGAAAGACTGGCCCCCATGATTCAATTACCTC...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACGTAACAGGCAGAGGTTaGAACAGTTTGAAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNVTGRG*NSLKGS
Trigger: TGAGCCCTTCAAACTGTTCCAACCTCTGCCTGTTAC...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACGCATCACCAGTGATATaGTTTGGCTATGTCCCCACT +
Preference number: 4 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHASPVI*FGYVPT
Trigger: AGTGGGGACATAGCCAAACCATATCACTGGTGATGC...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp CCCTGTTACCCTTTTGTGTTGGCCAATTTCTCCCATTaGGAATGGCTGTATTTACCCAATACCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PCYPFVLANFSH*EWLYLPNTCTP
Trigger: GGGGGTACAGGTATTGGGTAAATACAGCCATTCCAAATGGGAGAAATTGGCCAACACAAAAGGGTAACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp GTTTGGAACTGGGTAACAGGCAGAGGTTGGAACAGTTaGAAGGGCTCAGAAGAAGACAGGAAAATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: VWNWVTGRGWNS*KGSEEDRKMWE
Trigger: TTCCCACATTTTCCTGTCTTCTTCTGAGCCCTTCAAACTGTTCCAACCTCTGCCTGTTACCCAGTTCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTGGTGTTGGAGGCCCTaGAAATCAAATAGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVWCWRP*KSNSLL
Trigger: CAAAAGACTATTTGATTTTCAGGGCCTCCAACACCA...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTGCATCGATATGCTTTaGAATGGTGTTCAACTGGAT +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRCIDML*NGVQLD
Trigger: ATCCAGTTGAACACCATTGCAAAGCATATCGATGCA...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp TGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTGGCCAGTCTTTCCTGTaGTATTCTCGTGATAGTAAG +
Preference number: 4 (lower is better)
Translates to: CGSLFPRKALTPNKTQPFGQSFL*YSRDSK
Trigger: CTTACTATCACGAGAATAGCACAGGAAAGACTGGCC...AAACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTGTGCCTCCATATTCTaGGTCAACTTCAATACCCAT +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVCASIF*VNFNTH
Trigger: ATGGGTATTGAAGTTGACCCAGAATATGGAGGCACA...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAGCAATGGTGTTCAACTaGATGTTGGAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQAMVFN*MLEAPS
Trigger: TGAAGGAGCTTCCAACATCCAGTTGAACACCATTGC...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTGAAGACAGGAAAATGTaGGAAAGTTTGGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNREDRKM*ESLELP
Trigger: AGGAAGTTCCAAACTTTCCCACATTTTCCTGTCTTC...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTGAAAGAGTGAATGAGTaGGTTTTCATCATCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRERVNE*VFIISP
Trigger: TGGAGAGATGATGAAAACCCACTCATTCACTCTTTC...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGTCAGGTTTCCCTATATaGAGGCCCGGAGTATCACGA +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLSGFPI*RPGVSR
Trigger: TCGTGATACTCCGGGCCTTCATATAGGGAAACCTGA...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACCTATTCTACCTTCATTaGGACTCCCTATGGCATACT +
Preference number: 4 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHLFYLH*DSLWHT
Trigger: AGTATGCCATAGGGAGTCTCAATGAAGGTAGAATAG...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCTTCACTTTTAAAATaGGAGAGTTGGTTGGCTGGT +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQPSLLK*ESWLAG
Trigger: ACCAGCCAACCAACTCTCTCATTTTAAAAGTGAAGG...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTAGGTAGGGTCTACATTTaGCATCACCAGAAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLGRVYI*HHQKEP
Trigger: GGGCTCTTTCTGGTGATGGCAAATGTAGACCCTACC...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCCAGTCCCAGCATCTGTaGAGCAATTCCTATTCTACC +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECQSQHL*SNSYST
Trigger: GGTAGAATAGGAATTGCTGCACAGATGCTGGGACTG...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTACTAATGTTGGCTTCTaGTCCATTATCTGTAAAGTC +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRTNVGF*SIICKV
Trigger: GACTTTACAGATAATGGAGCAGAAGCCAACATTAGT...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACTCTTCACATTTGACATaGTGGTTACAGCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNSSHLT*WLQLRR
Trigger: TCTCCTCAGCTGTAACCAGCATGTCAAATGTGAAGA...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCCCTCTTTATCAGCTCTaGTCTTCAAAGCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTPLYQL*SSKQMS
Trigger: ACTCATTTGCTTTGAAGACCAGAGCTGATAAAGAGG...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTAATATTCGAATGCTGTaGAAGTTTATTCCCACGCAA +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRNIRML*KFIPTQ
Trigger: TTGCGTGGGAATAAACTTCCACAGCATTCGAATATT...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
3UTR CAA 72 bp CTTTCCCTTGCCTTAGAGATTTGTGGAACTTCGAACTaGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSLALEICGTSN*REMIVRRGVKG
Trigger: ACCTTTGACTCCACGTCTCACAATCATCTCTCTCAAGTTCGAAGTTCCACAAATCTCTAAGGCAAGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp AAGAGACTGGCAGCATCTTTCCCTTGCCTTAGAGATTaGTGGAACTTCGAACTTGAGAGAGATGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: KRLAASFPCLRD*WNFELERDDCE
Trigger: CTCACAATCATCTCTCTCAAGTTCGAAGTTCCACAAATCTCTAAGGCAAGGGAAAGATGCTGCCAGTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp AGGCTGAGGTGGTCTCAGATGGAGATGAAAAACTTTTaGGGAACTGGAGTAAAGGTGACTCTTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: RLRWSQMEMKNF*GTGVKVTLAVF
Trigger: AAACACAGCAAGAGTCACCTTTACTCCAGTTCCCAAAAAGTTTTTCATCTCCATCTGAGACCACCTCAGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTCCCATCAACCCTTGTTaGAATAATCCTTGTATTACT +
Preference number: 4 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVPINPC*NNPCIT
Trigger: AGTAATACAAGGATTATTTCAACAAGGGTTGATGGG...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCGGTCTTCAAAGCAAATaGGTCACTACCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFGLQSK*VTTCSS
Trigger: GCTGGAGCAGGTAGTGACTCATTTGCTTTGAAGACC...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGGGGGTCTCTTCTGACTaGGAATCCCTAATACTGAAG +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLGVSSD*ESLILK
Trigger: CTTCAGTATTAGGGATTCTCAGTCAGAAGAGACCCC...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAACATGCTGGTTACAGCTaGGGAGAGCCAGTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKHAGYS*GEPVSL
Trigger: CAAAGACACTGGCTCTCCTCAGCTGTAACCAGCATG...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAGCAGCATCTTTCCCTTaGCTTAGAGATTTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFEAASFP*LRDLWN
Trigger: GTTCCACAAATCTCTAAGGCAAGGGAAAGATGCTGC...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAATTGGGTGGAATCCAGTaGCACCCACACACATCTGCT +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKLGGIQ*HPHTSA
Trigger: AGCAGATGTGTGTGGGTGGCACTGGATTCCACCCAA...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTAATTAATGTGTTCTaGATCTCACAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRLINVF*ISQKTA
Trigger: GGCTGTCTTTTGTGAGATCCAGAACACATTAATTAA...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAGCTGAGGCAAATAGGTaGCCTTTTGTTCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTAEANR*PFVLLF
Trigger: GAACAGAAGAACAAAAGGCCACCTATTTGCCTCAGC...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGTGTTCAACTGGATGTTaGAAGCTCCTTCATATATCG +
Preference number: 4 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRCSTGC*KLLHIS
Trigger: CGATATATGAAGGAGCTTCCAACATCCAGTTGAACA...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAATGTTCAACTGGATGTTaGAAGCTCCTTCATATATCG +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQCSTGC*KLLHIS
Trigger: CGATATATGAAGGAGCTTCCAACATCCAGTTGAACA...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCTCACATTTGACATGCTaGTTACAGCTGAGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSSHLTC*LQLRRA
Trigger: GGCTCTCCTCAGCTGTAACCAGCATGTCAAATGTGA...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp TTGATTTTACAGGTTCATAAGTGGAAGGGACTTGCCTaGTCTCAGATGAAACTTTGGACTGCGGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LILQVHKWKGLA*SQMKLWTADFW
Trigger: CCAAAAGTCCGCAGTCCAAAGTTTCATCTGAGACAAGGCAAGTCCCTTCCACTTATGAACCTGTAAAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp CTGAATTTGGGGACTAATTCTTGTCCCCAAGTACATTaGGATTCTTGTCTTCGTTCCTGGATGATCTTAGGC +
Preference number: 4 (lower is better)
Translates to: LNLGTNSCPQVH*DSCLRSWMILG
Trigger: GCCTAAGATCATCCAGGAACGAAGACAAGAATCCAAATGTACTTGGGGACAAGAATTAGTCCCCAAATTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAACGTGCTCAGCACTGCTaGTCCACATCTTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKRAQHC*STSLIH
Trigger: ATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACG...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTAAGGTGGAAGAAGCTCTaGGCCCCAATTTGTTTTCAG +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLRWKKL*APICFQ
Trigger: CTGAAAACAAATTGGGGCTCAGAGCTTCTTCCACCT...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGGCTTCTGGAACCTTaGCATTTTCGAATGTTAACG +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECWLLEP*HFRMLT
Trigger: CGTTAACATTCGAAAATGTCAAGGTTCCAGAAGCCA...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAACTATTCTACCTTCATTaGGACTCCCTATGGCATACT +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFELFYLH*DSLWHT
Trigger: AGTATGCCATAGGGAGTCTCAATGAAGGTAGAATAG...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACATTGTCCTGCAATCTCTaGTGCATAGTATTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTLSCNL*CIVFGH
Trigger: ATGGCCAAATACTATGCATCAGAGATTGCAGGACAA...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTTGTCCTGCAATCTCTaGTGCATAGTATTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECLSCNL*CIVFGH
Trigger: ATGGCCAAATACTATGCATCAGAGATTGCAGGACAA...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCAACACCAGGACCCTaGCTAAGGGCTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFPTPGP*LRASLK
Trigger: TTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGG...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCAAAATGAAGCTCCTGTaGCTCCATATTCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECKMKLL*LHILGQ
Trigger: TTGACCCAGAATATGGAGGCACAGGAGCTTCATTTT...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGTATCGTACCAATCTTTaGATCTCGGAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRYRTNL*ISEVFL
Trigger: GAGAAATACTTCCGAGATGCAAAGATTGGTACGATA...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAAATATTCGAATGCTGTaGAAGTTTATTCCCACGCAA +
Preference number: 4 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQNIRML*KFIPTQ
Trigger: TTGCGTGGGAATAAACTTCCACAGCATTCGAATATT...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACATTACAGGTTCATAAGTaGAAGGGACTTGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTLQVHK*KGLALS
Trigger: AGACAAGGCAAGTCCCTTCCACTTATGAACCTGTAA...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAGTTACCCTTTTGTGTTaGCCAATTTCTCCCATTTGG +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTVTLLC*PISPIW
Trigger: CCAAATGGGAGAAATTGGCCAACACAAAAGGGTAAC...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCAAGCAAGTTTGGAACTaGGTAACAGGCAGAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFKQVWN*VTGRGW
Trigger: CCAACCTCTGCCTGTTACCCAGTTCCAAACTTGCTT...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGAAGCTCCTGAAGTCATaGTTATCAGAAGAAAAGCTA +
Preference number: 4 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRKLLKS*LSEEKL
Trigger: TAGCTTTTCTTCTGATAACCATGACTTCAGGAGCTT...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAGTCCCCAAGTACATTTaGATTCTTGTCTTCGTTCCT +
Preference number: 4 (lower is better)
Translates to: KYSNAVEVYSHARHLLPTVPKYI*ILVFVP
Trigger: AGGAACGAAGACAAGAATCCAAATGTACTTGGGGAC...TGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCGCTGATCCACATCTTTaGTCCATTGAGGACATAATA +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECADPHL*SIEDII
Trigger: TATTATGTCCTCAATGGATCAAAGATGTGGATCAGC...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTATAGTATTTGGCCATTaGCGCTTCTTTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: KANTRTLTKGFIKIFECCIVFGH*RFFYEW
Trigger: CCATTCATAAAAGAAGCGTCAATGGCCAAATACTAT...ACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGAGCTACTTGGGAGGATaGGGCATGAGAATCACTGGA +
Preference number: 4 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQSYLGG*GMRITG
Trigger: TCCAGTGATTCTCATGCCTCATCCTCCCAAGTAGCT...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGGGTCTCAGATGGAGATaGAAAACTTTTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLGLRWR*KTFWEL
Trigger: CAGTTCCCAAAAAGTTTTTCATCTCCATCTGAGACC...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCAGAGTGGGGCATTGCTaGAAAGATAGCCAAAAATAT +
Preference number: 4 (lower is better)
Translates to: KKANTRTLTKGFIKIFECRVGHC*KDSQKY
Trigger: ATATTTTTGGCTATCTTTTCAGCAATGCCCCACTCT...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAAAGTCTCATGAGATCTaGTGGGTTTATCAGGGGTTT +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREKSHEI*WVYQGF
Trigger: AAACCCCTGATAAACCCATCAGATCTCATGAGACTT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTCGATACATACCATTCTaGTTTATGAAAGATCAGCAA +
Preference number: 4 (lower is better)
Translates to: CGSLFPRKALTPNKTQPFRYIPF*FMKDQQ
Trigger: TTGCTGATCTTTCATAAAGCAGAATGGTATGTATCG...AAACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACTTAATTAATGTGTTCTaGATCTCACAAAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNLINVF*ISQKTA
Trigger: GGCTGTCTTTTGTGAGATCCAGAACACATTAATTAA...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTAGCAATGGTGTTCAACTaGATGTTGGAAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLAMVFN*MLEAPS
Trigger: TGAAGGAGCTTCCAACATCCAGTTGAACACCATTGC...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTACGATATGCTTTGCAATaGTGTTCAACTGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLRYALQ*CSTGCW
Trigger: CCAACATCCAGTTGAACACCATTGCAAAGCATATCG...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAACCAATTTCTCCCATTTaGAATGGCTGTATTTACCCA +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFEPISPI*NGCIYP
Trigger: TGGGTAAATACAGCCATTCCAAATGGGAGAAATTGG...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCCTAACAATACTAACTTaGCAGTTGGGTGGAATCCAG +
Preference number: 4 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSLTILT*QLGGIQ
Trigger: CTGGATTCCACCCAACTGCCAAGTTAGTATTGTTAG...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAACATCTTTGATCCATTaGGGACATAATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFETSLIH*GHNNLP
Trigger: AGGGAGATTATTATGTCCTCAATGGATCAAAGATGT...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAGCTGATCCACATCTTTaGTCCATTGAGGACATAATA +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREADPHL*SIEDII
Trigger: TATTATGTCCTCAATGGATCAAAGATGTGGATCAGC...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAATTGACGCTTCTTTTATaGATGGCTTTCCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKRELTLLL*MAFQLL
Trigger: TAGAAGCTGGAAAGCCATTCATAAAAGAAGCGTCAA...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGCCAACACCAGGACCCTaGCTAAGGGCTTCATTAAAA +
Preference number: 4 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQPTPGP*LRASLK
Trigger: TTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGG...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAACTGAAAAATAGTGCATaGCAGAATATCCAACACTGT +
Preference number: 4 (lower is better)
Translates to: TKKANTRTLTKGFIKIFELKNSA*QNIQHC
Trigger: ACAGTGTTGGATATTCTGTCATGCACTATTTTTCAG...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAACGTGGAGTCAAAGGTaGTCATTTTGGAGGTTTAAA +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKRETWSQR*SFWRFK
Trigger: TTTAAACCTCCAAAATGATCACCTTTGACTCCACGT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCTTCCTAGATACTTGCTaGATGGCTTTGCCCAAAATG +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFFLDTC*MALPKM
Trigger: CATTTTGGGCAAAGCCATTCAGCAAGTATCTAGGAA...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGTTTCTCATTTTCTCTTaGTGCCGCCATGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLFLIFS*CRHVRS
Trigger: ACTTCTTACATGGCGGCAGCAAGAGAAAATGAGAAA...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCTATCACGAGCACAGTaGATAAAAATGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFLSRAQ*IKMKLL
Trigger: CAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAG...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACGATATGCTTTGCAATaGTGTTCAACTGGATGTTGG +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLRYALQ*CSTGCW
Trigger: CCAACATCCAGTTGAACACCATTGCAAAGCATATCG...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAACTTTGGGGGACTGTTaGGAAGGCATGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKTLGDC*EGMIGF
Trigger: AAAACCAATCATGCCTTCCCAACAGTCCCCCAAAGT...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTATTCTCCCATTTGGAATaGCTGTATTTACCCAATACC +
Preference number: 4 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLFSHLE*LYLPNT
Trigger: GGTATTGGGTAAATACAGCCATTCCAAATGGGAGAA...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTAAGAGAGTTGGTTGGCTaGTTCTCTAAGGTCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLRELVG*FSKVFL
Trigger: TAGAAAGACCTTAGAGAACCAGCCAACCAACTCTCT...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
3UTR CAA 72 bp AGGAAAATGTGGGAAAGTTTGGAACTTCCTAGATACTaGCTGAATGGCTTTGCCCAAAATGCTGATAGCAAT +
Preference number: 4 (lower is better)
Translates to: RKMWESLELPRY*LNGFAQNADSN
Trigger: ATTGCTATCAGCATTTTGGGCAAAGCCATTCAGCAAGTATCTAGGAAGTTCCAAACTTTCCCACATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAATGGTGTTGGAGGCCCTaGAAATCAAATAGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKWCWRP*KSNSLL
Trigger: CAAAAGACTATTTGATTTTCAGGGCCTCCAACACCA...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAATAGTATTTGGCCATTaGCGCTTCTTTTATGAATGG +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREIVFGH*RFFYEW
Trigger: CCATTCATAAAAGAAGCGTCAATGGCCAAATACTAT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR TCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAGTGTCTTTGGCAAGTaGTTCATATACATAAGCGAT +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLSVFGK*FIYISD
Trigger: ATCGCTTATGTATATGAATCACTTGCCAAAGACACT...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAAAATGAAGCTCCTGTaGCTCCATATTCTGGGTCAA +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKKMKLL*LHILGQ
Trigger: TTGACCCAGAATATGGAGGCACAGGAGCTTCATTTT...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTATGCATCGATATGCTTTaGAATGGTGTTCAACTGGAT +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLCIDML*NGVQLD
Trigger: ATCCAGTTGAACACCATTGCAAAGCATATCGATGCA...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAGGTTTAAAATTTGACTaGCCTGCTGAATTTTGGACT +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREGLKFD*PAEFWT
Trigger: AGTCCAAAATTCAGCAGGGCAGTCAAATTTTAAACC...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATTGTGCCTCCATATTCTaGGTCAACTTCAATACCCAT +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDCASIF*VNFNTH
Trigger: ATGGGTATTGAAGTTGACCCAGAATATGGAGGCACA...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATCTATCACGAGCACAGTaGATAAAAATGAAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDLSRAQ*IKMKLL
Trigger: CAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAG...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACAGATGCATCAACTTTaGCTAATTCCTCTATCACGA +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLQMHQL*LIPLSR
Trigger: TCGTGATAGAGGAATTAGCCAAAGTTGATGCATCTG...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACCTCTTTATCAGCTCTaGTCTTCAAAGCAAATGAGT +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLPLYQL*SSKQMS
Trigger: ACTCATTTGCTTTGAAGACCAGAGCTGATAAAGAGG...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGACCTCTTTTTCTTCCTaGTCTCAGGTATGTCTTTAT +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLTSFSS*SQVCLY
Trigger: ATAAAGACATACCTGAGACCAGGAAGAAAAAGAGGT...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATTCTCAGATGAAACTTTaGACTGCGGACTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDSQMKL*TADFWV
Trigger: AACCCAAAAGTCCGCAGTCCAAAGTTTCATCTGAGA...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp CCACTGAAATTGCAACTTGAATTTATCTTCTGGAATTCCCACATGTTGTGGGAGAAATGTGGGAAAGTTTaGAACTTCCTAGATACTTGC +
Preference number: 4 (lower is better)
Translates to: PLKLQLEFIFWNSHMLWEKCGKV*NFLDTC
Trigger: GCAAGTATCTAGGAAGTTCCAAACTTTCCCACATTT...CTCCCACAACATGTGGGAATTCCAGAAGATAAATTCAAGTTGCAATTTCAGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATCTGCTAACAGTAGAGTaGGGCATTGCTGAAAAGATA +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDLLTVE*GIAEKI
Trigger: TATCTTTTCAGCAATGCCCCACTCTACTGTTAGCAG...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCCTTGAATTTATCTTCTaGAATTCCCACATGTTGTGG +
Preference number: 4 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSLEFIF*NSHMLW
Trigger: CCACAACATGTGGGAATTCCAGAAGATAAATTCAAG...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTAATTTTCATCCATGGTTaGAACCAAAGGTGCAATTTG +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLIFIHG*NQRCNL
Trigger: CAAATTGCACCTTTGGTTTCAACCATGGATGAAAAT...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTATATCGTACCAATCTTTaGATCTCGGAAGTATTTCTC +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLYRTNL*ISEVFL
Trigger: GAGAAATACTTCCGAGATGCAAAGATTGGTACGATA...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTATATTCTGCATCGATATaGTTTGCAATGGTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLYSASI*FAMVFN
Trigger: GTTGAACACCATTGCAAAGCATATCGATGCAGAATA...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAGTTTTGACTTCGCTTaGAACTTAGAGTTGAATCTA +
Preference number: 4 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLSFDFA*NLELNL
Trigger: TAGATTCAACTCTAAGTTGCAAGCGAAGTCAAAACT...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CCA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTGATGCATAGTATTTaGCCATTGACGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLLMHSI*PLTLLL
Trigger: TAAAAGAAGCGTCAATGGCCAAATACTATGCATCAG...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCTGATGCATAGTATTTaGCCATTGACGCTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFLMHSI*PLTLLL
Trigger: TAAAAGAAGCGTCAATGGCCAAATACTATGCATCAG...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CCA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAATGTTTCTAATTCTATaGGAAGAAGTTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREMFLIL*EEVGIP
Trigger: AGGAATCCCAACTTCTTCCCATAGAATTAGAAACAT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR TCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATACATCTTTGATCCATTaGGGACATAATAATCTCCCT +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDTSLIH*GHNNLP
Trigger: AGGGAGATTATTATGTCCTCAATGGATCAAAGATGT...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR GCA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAATCATCTGTAAATGTTTaGAGGGGAGCAAAGTGTATT +
Preference number: 4 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKSSVNV*RGAKCI
Trigger: AATACACTTTGCTCCCCTGCAAACATTTACAGATGA...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR GCA 90 bp TGGGTTTTCATCATCTCTCCATTTGAAAGTCAAGTAAGCTTTATCTCTTCGGATATTATTCTAAGCAACTaGATGAGCCTTGGAAGATTC +
Preference number: 4 (lower is better)
Translates to: WVFIISPFESQVSFISSDIILSN*MSLGRF
Trigger: GAATCTTCCAAGGCTCATGCAGTTGCTTAGAATAAT...ATCCGAAGAGATAAAGCTTACTTGACTTTCAAATGGAGAGATGATGAAAACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp CACTTTGGGAGGCCAAGGTGGGCGATATCCAGAAGCCAGAAGACCAGCCTGGGCTGTATGTTAGTAATCTaGCAGCTTCCAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: HFGRPRWAISRSQKTSLGCMLVI*QLPAGW
Trigger: CCACCCAGCTGGAAGCTGCAAGATTACTAACATACA...GCCCAGGCTGGTCTTCTGGCTTCTGGATATCGCCCACCTTGGCCTCCCAAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTGGCCACGTGAGCCACTaGGTGTTGGAGGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRGHVSH*VLEALK
Trigger: TTTCAGGGCCTCCAACACCAAGTGGCTCACGTGGCC...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAGGCCACGTGAGCCACTaGGTGTTGGAGGCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQGHVSH*VLEALK
Trigger: TTTCAGGGCCTCCAACACCAAGTGGCTCACGTGGCC...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp CACTTTGGGAGGCCAAGGTGGGCGATATCCAGAAGCCAGAAGACCAGCCTGGGCAGTACATTTGGATTCTaGTCTTCGTTCCTGGATGAT +
Preference number: 5 (lower is better)
Translates to: HFGRPRWAISRSQKTSLGSTFGF*SSFLDD
Trigger: ATCATCCAGGAACGAAGACAAGAATCCAAATGTACT...GCCCAGGCTGGTCTTCTGGCTTCTGGATATCGCCCACCTTGGCCTCCCAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTAGTCAAAACATCCTaGCGCCAGTCCCAGCATCTG +
Preference number: 5 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTVVKTS*RQSQHL
Trigger: CAGATGCTGGGACTGGCGCAAGGATGTTTTGACTAC...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGCAGAATTCCCATGTGTaGTGGGAGGGACCCGGGGGA +
Preference number: 5 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLQNSHV*WEGPGG
Trigger: TCCCCCGGGTCCCTCCCACAACACATGGGAATTCTG...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTGTCTCAGATGAAACTTaGGACTGCGGACTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRVSDET*DCGLLG
Trigger: ACCCAAAAGTCCGCAGTCCAAAGTTTCATCTGAGAC...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACGGCCCTGTTACCCTTTaGTGTTGGCCAATTTCTCCC +
Preference number: 5 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNGPVTL*CWPISP
Trigger: GGGAGAAATTGGCCAACACAAAAGGGTAACAGGGCC...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS TCA 90 bp CACCAGAAAGAGCCCTGCGTGCTCAGCACTGCTGATCCACATCTTTaGTCCATTGAGGACATAATAATCTCCCTCTTTATCAGCTCTGGT +
Preference number: 5 (lower is better)
Translates to: HQKEPCVLSTADPHL*SIEDIIISLFISSG
Trigger: ACCAGAGCTGATAAAGAGGGAGATTATTATGTCCTCAATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACGCAGGGCTCTTTCTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS TCA 90 bp GCGCCAGTCCCAGCATCTGTGCAGCAATTCCTATTCTACCTTCATTaGGACTCCCTATGGCATACTTATAGCCATGTCCAATTTGTCCCA +
Preference number: 5 (lower is better)
Translates to: APVPASVQQFLFYLH*DSLWHTYSHVQFVP
Trigger: TGGGACAAATTGGACATGGCTATAAGTATGCCATAGGGAGTCTCAATGAAGGTAGAATAGGAATTGCTGCACAGATGCTGGGACTGGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTGTGAGCCACTTGGTGTaGGAGGCCCTGAAAATCAAA +
Preference number: 5 (lower is better)
Translates to: CGSLFPRKALTPNKTQPFVSHLV*EALKIK
Trigger: TTTGATTTTCAGGGCCTCCAACACCAAGTGGCTCAC...AAACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACGACTTTGGGGGACTGTaGGGAAGGCATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHDFGGL*GRHDWF
Trigger: AAACCAATCATGCCTTCCCAACAGTCCCCCAAAGTC...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCAGAGGTTGGAACAGTTaGAAGGGCTCAGAAGAAGAC +
Preference number: 5 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTRGWNS*KGSEED
Trigger: GTCTTCTTCTGAGCCCTTCAAACTGTTCCAACCTCT...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAATACTAACTTGGCAGTaGGGTGGAATCCAGTGCCAC +
Preference number: 5 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQILTWQ*GGIQCH
Trigger: GTGGCACTGGATTCCACCCAACTGCCAAGTTAGTAT...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS TCA 90 bp GTGGAAGAAGCTCTGAGCCCCAATTTGTTTTCAGGTTTCCCTATATaGAGGCCCGGAGTATCACGATCTACTAAGAAGGAGGTAATTCCC +
Preference number: 5 (lower is better)
Translates to: VEEALSPNLFSGFPI*RPGVSRSTKKEVIP
Trigger: GGGAATTACCTCCTTCTTAGTAGATCGTGATACTCCGGGCCTTCATATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGCTTCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS GCA 90 bp AGGGAGGGGTCCCACTCCTATAGACGTCAGTATTCTGCATCGATATaGTTTGCAATGGTGTTCAACTGGATGTTGGAAGCTCCTTCATAT +
Preference number: 5 (lower is better)
Translates to: REGSHSYRRQYSASI*FAMVFNWMLEAPSY
Trigger: ATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGGACCCCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS-3UTR CAA 90 bp CTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTACAGATGCATCAACTTaGGCTAATTCCTCTATCACG +
Preference number: 5 (lower is better)
Translates to: LWKFIPTQGTYSQQDTTVTDAST*ANSSIT
Trigger: CGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGT...AACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAGCTCTGAGCCCCAATTaGTTTTCAGGTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQALSPN*FSGFPI
Trigger: TATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGC...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACGCTCTGAGCCCCAATTaGTTTTCAGGTTTCCCTATA +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDALSPN*FSGFPI
Trigger: TATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGC...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCGTAGTCAAAACATCCTaGCGCCAGTCCCAGCATCTG +
Preference number: 5 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSVVKTS*RQSQHL
Trigger: CAGATGCTGGGACTGGCGCAAGGATGTTTTGACTAC...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAGTGAGCCACTTGGTGTaGGAGGCCCTGAAAATCAAA +
Preference number: 5 (lower is better)
Translates to: TKKANTRTLTKGFIKIFEVSHLV*EALKIK
Trigger: TTTGATTTTCAGGGCCTCCAACACCAAGTGGCTCAC...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACTGTAAGAAGTGCTTTTaGCCTCCCACCATGATTCTG +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDCKKCF*PPTMIL
Trigger: CAGAATCATGGTGGGAGGCAAAAAGCACTTCTTACA...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCGGTAACAGGCAGAGGTaGGAACAGTTTGAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSGNRQR*EQFEGL
Trigger: GAGCCCTTCAAACTGTTCCAACCTCTGCCTGTTACC...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp GCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCGTTTTAAAATGAGAGAGTaGGTTGGCTGGTTCTCTAAG +
Preference number: 5 (lower is better)
Translates to: AVEVYSHARHLLPTRHNRFKMRE*VGWFSK
Trigger: CTTAGAGAACCAGCCAACCAACTCTCTCATTTTAAA...ACGGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS CCA 90 bp CCACAGATGCATCAACTTTGGCTAATTCCTCTATCACGAGCACAGTaGATAAAAATGAAGCTCCTGTGCCTCCATATTCTGGGTCAACTT +
Preference number: 5 (lower is better)
Translates to: PQMHQLWLIPLSRAQ*IKMKLLCLHILGQL
Trigger: AAGTTGACCCAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAGATGCATCAACTTaGGCTAATTCCTCTATCACG +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDTDAST*ANSSIT
Trigger: CGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGT...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCTTGGCTTCTGGAACCTaGACATTTTCGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTLASGT*TFSNVN
Trigger: GTTAACATTCGAAAATGTCAAGGTTCCAGAAGCCAA...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp GAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAAATTTGTCCCAAGATATaGGCTTCTGGAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: ECCGSLFPRKALTPNKTQICPKI*ASGTLT
Trigger: TGTCAAGGTTCCAGAAGCCAATATCTTGGGACAAAT...TTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGATAGCCATGTCCAATTaGTCCCAAGATATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRIAMSN*SQDIGF
Trigger: GAAGCCAATATCTTGGGACAAATTGGACATGGCTAT...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACATAGCCATGTCCAATTaGTCCCAAGATATTGGCTTC +
Preference number: 5 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNIAMSN*SQDIGF
Trigger: GAAGCCAATATCTTGGGACAAATTGGACATGGCTAT...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTATGTTAGTAATCTaGCAGCTTCCAGCTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KKANTRTLTKGFIKIFECCMLVI*QLPAGW
Trigger: CCACCCAGCTGGAAGCTGCAAGATTACTAACATACA...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACGTGTTCAACTGGATGTaGGAAGCTCCTTCATATATC +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDVFNWM*EAPSYI
Trigger: GATATATGAAGGAGCTTCCAACATCCAGTTGAACAC...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTCTTTCTCATTTTCTCTaGCTGCCGCCATGTAAGAAG +
Preference number: 5 (lower is better)
Translates to: KANTRTLTKGFIKIFECCLSHFL*LPPCKK
Trigger: CTTCTTACATGGCGGCAGCAAGAGAAAATGAGAAAG...ACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGGAAGGGACTTGCCTaGTCTCAGATGAAACTTTGG +
Preference number: 5 (lower is better)
Translates to: KKANTRTLTKGFIKIFECWKGLA*SQMKLW
Trigger: CCAAAGTTTCATCTGAGACAAGGCAAGTCCCTTCCA...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AATATCAAAACTCTCATTTCTCTGTTGTCCACCTTCCTCCTGAGGGGACTCAGGTGTTACCCTTTTGTGTaGGCCAATTTCTCCCATTTG +
Preference number: 5 (lower is better)
Translates to: NIKTLISLLSTFLLRGLRCYPFV*ANFSHL
Trigger: CAAATGGGAGAAATTGGCCAACACAAAAGGGTAACA...CCTGAGTCCCCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGTTTTGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTTGTCCCCAAGTACATTaGGATTCTTGTCTTCGTTCC +
Preference number: 5 (lower is better)
Translates to: KANTRTLTKGFIKIFECCCPQVH*DSCLRS
Trigger: GGAACGAAGACAAGAATCCAAATGTACTTGGGGACA...ACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS GCA 90 bp CTAATTCCTCTATCACGAGCACAGTGGATAAAAATGAAGCTCCTGTaGCTCCATATTCTGGGTCAACTTCAATACCCATCAACCCTTGTT +
Preference number: 5 (lower is better)
Translates to: LIPLSRAQWIKMKLL*LHILGQLQYPSTLV
Trigger: AACAAGGGTTGATGGGTATTGAAGTTGACCCAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000411816.2
CDS GCA 90 bp CTAATTCCTCTATCACGAGCACAGTGGATAAAAATGAAGCTCCTGTaGCTCCATATTCTGGGTCAACTTCAATACCCATCAACTGAACTC +
Preference number: 5 (lower is better)
Translates to: LIPLSRAQWIKMKLL*LHILGQLQYPSTEL
Trigger: GAGTTCAGTTGATGGGTATTGAAGTTGACCCAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368869.8
CDS CCA 90 bp CCCACTCCTATAGACGTCAGTATTCTGCATCGATATGCTTTGCAATaGTGTTCAACTGGATGTTGGAAGCTCCTTCATATATCGTACCAA +
Preference number: 5 (lower is better)
Translates to: PTPIDVSILHRYALQ*CSTGCWKLLHISYQ
Trigger: TTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS-3UTR CAA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCCCATTATTTGTTATATaGAGTAGAGCTTCTGACTGG +
Preference number: 5 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTPLFVI*SRASDW
Trigger: CCAGTCAGAAGCTCTACTCAATATAACAAATAATGG...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACCAAATAGGTGGCCTTTaGTTCTTCTGTTCCATGTTT +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDQIGGL*FFCSMF
Trigger: AAACATGGAACAGAAGAACAAAAGGCCACCTATTTG...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAACTGCATCGATATGCTTaGCAATGGTGTTCAACTGGA +
Preference number: 5 (lower is better)
Translates to: TKKANTRTLTKGFIKIFELHRYA*QWCSTG
Trigger: TCCAGTTGAACACCATTGCAAAGCATATCGATGCAG...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCCTGCATCGATATGCTTaGCAATGGTGTTCAACTGGA +
Preference number: 5 (lower is better)
Translates to: KKANTRTLTKGFIKIFECLHRYA*QWCSTG
Trigger: TCCAGTTGAACACCATTGCAAAGCATATCGATGCAG...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACCTTCCTTTTACTAATGTaGGCTTCTGCTCCATTATCT +
Preference number: 5 (lower is better)
Translates to: MLWKFIPTQGTYSQQDTTFLLLM*ASAPLS
Trigger: AGATAATGGAGCAGAAGCCAACATTAGTAAAAGGAA...GGTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAGGAAGAACACTGAATTaGGGGACTAATTCTTGTCCC +
Preference number: 5 (lower is better)
Translates to: TKKANTRTLTKGFIKIFEGRTLN*GTNSCP
Trigger: GGGACAAGAATTAGTCCCCAAATTCAGTGTTCTTCC...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS CCA 90 bp ATGTGTTCTGGATCTCACAAAAGACAGCCACAGATGCATCAACTTTaGCTAATTCCTCTATCACGAGCACAGTGGATAAAAATGAAGCTC +
Preference number: 5 (lower is better)
Translates to: MCSGSHKRQPQMHQL*LIPLSRAQWIKMKL
Trigger: GAGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCAGAACACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTACTGACTGGGAAGATTTaGAGACATGAGGAGGAATCT +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLLTGKI*RHEEES
Trigger: AGATTCCTCCTCATGTCTCAAAATCTTCCCAGTCAG...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp TGCTTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGCTGACTGGGAAGATTTaGAGACATGAGGAGGAATCT +
Preference number: 5 (lower is better)
Translates to: CLFPKFKSGSPVPKLNSLLTGKI*RHEEES
Trigger: AGATTCCTCCTCATGTCTCAAAATCTTCCCAGTCAG...CAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTACCTATTCTACCTTCATaGAGACTCCCTATGGCATAC +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLPILPS*RLPMAY
Trigger: GTATGCCATAGGGAGTCTCAATGAAGGTAGAATAGG...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACACAACAAAAGCCTAGCAGCATaGTATGTTAGTAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: NAVEVYSHARHLLPTRHNKSLAA*YVSNLA
Trigger: TGCAAGATTACTAACATACAATGCTGCTAGGCTTTT...GTTGTGTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCCGATACATTTACTCGTaGTTTGTCCTGCAATCTCTG +
Preference number: 5 (lower is better)
Translates to: KKANTRTLTKGFIKIFECRYIYS*FVLQSL
Trigger: CAGAGATTGCAGGACAAACAACGAGTAAATGTATCG...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTGAATCATGGGGGCCAGTCTTTCCTGTGCTATTCTCGTGATAGTAAGTCTCACATATCGTACCAATCTTaGCATCTCGGAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: LNHGGQSFLCYSRDSKSHISYQS*HLGSIS
Trigger: AGAAATACTTCCGAGATGCAAAGATTGGTACGATAT...GTGAGACTTACTATCACGAGAATAGCACAGGAAAGACTGGCCCCCATGATTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGAGATGAAAAACTTTTaGGGAACTGGAGTAAAGGTG +
Preference number: 5 (lower is better)
Translates to: KANTRTLTKGFIKIFECCEMKNF*GTGVKV
Trigger: CACCTTTACTCCAGTTCCCAAAAAGTTTTTCATCTC...ACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTACTTCTTCATTTTCTCTaGCCACCACCATGTACGAAG +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLLLHFL*PPPCTK
Trigger: CTTCGTACATGGTGGTGGCAAGAGAAAATGAAGAAG...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAACTCTCATTTCTCTGTaGTCCACCTTCCTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKTLISL*STFLLR
Trigger: CCTCAGGAGGAAGGTGGACAACAGAGAAATGAGAGT...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACTCCCAACAAGACTTCTATGGGAAGAAGTaGGGATTCCTTTTACTAATG +
Preference number: 5 (lower is better)
Translates to: IRMLWKFIPTQGTYSQQDFYGKK*GFLLLM
Trigger: CATTAGTAAAAGGAATCCCAACTTCTTCCCATAGAA...GTCTTGTTGGGAGTAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS CCA 90 bp AGTATTCTGCATCGATATGCTTTGCAATGGTGTTCAACTGGATGTTaGAAGCTCCTTCATATATCGTACCAATCTTTGCATCTCGGAAGT +
Preference number: 5 (lower is better)
Translates to: SILHRYALQWCSTGC*KLLHISYQSLHLGS
Trigger: ACTTCCGAGATGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CCA 90 bp AGACGTCAGTATTCTGCATCGATATGCTTTGCAATGGTGTTCAACTaGATGTTGGAAGCTCCTTCATATATCGTACCAATCTTTGCATCT +
Preference number: 5 (lower is better)
Translates to: RRQYSASICFAMVFN*MLEAPSYIVPIFAS
Trigger: AGATGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS-3UTR CAA 90 bp CCACTGAAATTGCAACTTGAATTTATCTTCTGGAATTCCCACATGTTGTGGGAGCTCATCTGTAAATGTTaGCAGGGGAGCAAAGTGTAT +
Preference number: 5 (lower is better)
Translates to: PLKLQLEFIFWNSHMLWELICKC*QGSKVY
Trigger: ATACACTTTGCTCCCCTGCAAACATTTACAGATGAG...CTCCCACAACATGTGGGAATTCCAGAAGATAAATTCAAGTTGCAATTTCAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCCAAATAGGTGGCCTTTaGTTCTTCTGTTCCATGTTT +
Preference number: 5 (lower is better)
Translates to: KKANTRTLTKGFIKIFECQIGGL*FFCSMF
Trigger: AAACATGGAACAGAAGAACAAAAGGCCACCTATTTG...GCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTAATTTGTCCCAAGATATaGGCTTCTGGAACCTTGACA +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLICPKI*ASGTLT
Trigger: TGTCAAGGTTCCAGAAGCCAATATCTTGGGACAAAT...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTACCTATTCTACCTTCATaGAGACTCCCTATGGCATAC +
Preference number: 5 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLPILPS*RLPMAY
Trigger: GTATGCCATAGGGAGTCTCAATGAAGGTAGAATAGG...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp ATTCTAAGCAACTGCATGAGCCTTGGAAGATTCTTCATCTCTAACACATGTTCCGTGTTCAACTGGATGTaGGAAGCTCCTTCATATATC +
Preference number: 5 (lower is better)
Translates to: ILSNCMSLGRFFISNTCSVFNWM*EAPSYI
Trigger: GATATATGAAGGAGCTTCCAACATCCAGTTGAACAC...GGAACATGTGTTAGAGATGAAGAATCTTCCAAGGCTCATGCAGTTGCTTAGAAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTATGTGGAACTTCGAACTaGAGAGAGATGATTGTGAGA +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLCGTSN*REMIVR
Trigger: TCTCACAATCATCTCTCTCAAGTTCGAAGTTCCACA...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp TTGAGAGAGATGATTGTGAGACGTGGAGTCAAAGGTGATCATTTTGGAGGTTTATCTAACAATACTAACTaGGCAGTTGGGTGGAATCCA +
Preference number: 5 (lower is better)
Translates to: LREMIVRRGVKGDHFGGLSNNTN*AVGWNP
Trigger: TGGATTCCACCCAACTGCCAAGTTAGTATTGTTAGA...TAAACCTCCAAAATGATCACCTTTGACTCCACGTCTCACAATCATCTCTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp ACCAAAAAGGCCAACACCAGGACCCTGACTAAGGGCTTCATTAAAATATTCGAAATATCGTACCAATCTTaGCATCTCGGAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: TKKANTRTLTKGFIKIFEISYQS*HLGSIS
Trigger: AGAAATACTTCCGAGATGCAAAGATTGGTACGATAT...TTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCTGGTGTTGGCCTTTTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAACGATACATTTACTCGTaGTTTGTCCTGCAATCTCTG +
Preference number: 5 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKRYIYS*FVLQSL
Trigger: CAGAGATTGCAGGACAAACAACGAGTAAATGTATCG...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGGCCAATTTCTCCCATTaGGAATGGCTGTATTTACCC +
Preference number: 5 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQANFSH*EWLYLP
Trigger: GGGTAAATACAGCCATTCCAAATGGGAGAAATTGGC...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp CCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAAAGAGAAATGTCCCCACTGAAATaGCAACTTGAATTTATCTTC +
Preference number: 5 (lower is better)
Translates to: PKFKSGSPVPKLNSLKREMSPLK*QLEFIF
Trigger: GAAGATAAATTCAAGTTGCAATTTCAGTGGGGACAT...TTCTCTTTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS-3UTR CAA 90 bp AGGACCCTGACTAAGGGCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCATTATTTGTTATATaGAGTAGAGCTTCTGACTGG +
Preference number: 5 (lower is better)
Translates to: RTLTKGFIKIFECCGSLFPLFVI*SRASDW
Trigger: CCAGTCAGAAGCTCTACTCAATATAACAAATAATGG...GAATAAACTTCCACAGCATTCGAATATTTTAATGAAGCCCTTAGTCAGGGTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp TTATTTCCCAAGTTTAAAAGTGGATCTCCTGTGCCTAAGTTAAACAGCCTGAAATTGGCTTCTGGAACCTaGACATTTTCGAATGTTAAC +
Preference number: 5 (lower is better)
Translates to: LFPKFKSGSPVPKLNSLKLASGT*TFSNVN
Trigger: GTTAACATTCGAAAATGTCAAGGTTCCAGAAGCCAA...TTTCAGGCTGTTTAACTTAGGCACAGGAGATCCACTTTTAAACTTGGGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp GCTTCATTAAAATATTCGAATGCTGTGGAAGTTTATTCCCACGCAAGGCACTTAAAAAGCCTAGCAGCATaGTATGTTAGTAATCTTGCA +
Preference number: 5 (lower is better)
Translates to: ASLKYSNAVEVYSHARHLKSLAA*YVSNLA
Trigger: TGCAAGATTACTAACATACAATGCTGCTAGGCTTTT...TAAGTGCCTTGCGTGGGAATAAACTTCCACAGCATTCGAATATTTTAATGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS-3UTR CAA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGAATATGAAAGCAAGTTaGGAACTGGGTAACAGGCAG +
Preference number: 5 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQNMKAS*ELGNRQ
Trigger: CTGCCTGTTACCCAGTTCCAAACTTGCTTTCATATT...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS CCA 90 bp TCTTCTGTTCCATGTTTTCTAATCAGTGTGTTAATTAATGTGTTCTaGATCTCACAAAAGACAGCCACAGATGCATCAACTTTGGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSVPCFLISVLINVF*ISQKTATDASTLAN
Trigger: ATTAGCCAAAGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCAGAACACATTAATTAACACACTGATTAGAAAACATGGAACAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS-3UTR CAA 90 bp AGTCCAATTAAACCTCTTTTTCTTCACAATCTTGAGGAATGTCTTTATCAGCAGAAAATGTGGGAAAGTTaGGAACTTCCTAGATACTTG +
Preference number: 5 (lower is better)
Translates to: SPIKPLFLHNLEECLYQQKMWES*ELPRYL
Trigger: CAAGTATCTAGGAAGTTCCAAACTTTCCCACATTTT...CTGCTGATAAAGACATTCCTCAAGATTGTGAAGAAAAAGAGGTTTAATTGGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358776.7
CDS GCA 72 bp AATTTCTTCTTAGCTGCTGCCGCGCAGCAACCGCACTaGCAGGCCCTCCATCCTCGCCGCAGGCCTCTCCGC +
Preference number: 6 (lower is better)
Translates to: NFFLAAAAQQPH*QALHPRRRPLR
Trigger: GCGGAGAGGCCTGCGGCGAGGATGGAGGGCCTGGCAGTGCGGTTGCTGCGCGGCAGCAGCTAAGAAGAAATT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368869.8
CDS CCA 72 bp CATTGTATGTTAGTAATCTTGCAGCTTCCAGCTGGGTaGCCACGTGAGCCACTTGGTGTTGGAGGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: HCMLVILQLPAG*PREPLGVGGPE
Trigger: TTCAGGGCCTCCAACACCAAGTGGCTCACGTGGCCACCCAGCTGGAAGCTGCAAGATTACTAACATACAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS GCA 72 bp GGGTCTACATTTGCCATCACCAGAAAGAGCCCTGCGTaGTCAGCACTGCTGATCCACATCTTTGATCCATTG +
Preference number: 6 (lower is better)
Translates to: GSTFAITRKSPA*SALLIHIFDPL
Trigger: CAATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACGCAGGGCTCTTTCTGGTGATGGCAAATGTAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS GCA 72 bp GGTAATTCCCTTATATCCAATGGTAGGGTCTACATTTaGCATCACCAGAAAGAGCCCTGCGTGCTCAGCACT +
Preference number: 6 (lower is better)
Translates to: GNSLISNGRVYI*HHQKEPCVLST
Trigger: AGTGCTGAGCACGCAGGGCTCTTTCTGGTGATGGCAAATGTAGACCCTACCATTGGATATAAGGGAATTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS TCA 72 bp GAGCCCTGCGTGCTCAGCACTGCTGATCCACATCTTTaGTCCATTGAGGACATAATAATCTCCCTCTTTATC +
Preference number: 6 (lower is better)
Translates to: EPCVLSTADPHL*SIEDIIISLFI
Trigger: GATAAAGAGGGAGATTATTATGTCCTCAATGGATCAAAGATGTGGATCAGCAGTGCTGAGCACGCAGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS TCA 72 bp GCTCTGAGCCCCAATTTGTTTTCAGGTTTCCCTATATaGAGGCCCGGAGTATCACGATCTACTAAGAAGGAG +
Preference number: 6 (lower is better)
Translates to: ALSPNLFSGFPI*RPGVSRSTKKE
Trigger: CTCCTTCTTAGTAGATCGTGATACTCCGGGCCTTCATATAGGGAAACCTGAAAACAAATTGGGGCTCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS CAA 90 bp AGGGGTCCCACTCCTATAGACGTCAGTATTCTGCATCGATATGCTTaGCAATGGTGTTCAACTGGATGTTGGAAGCTCCTTCATATATCG +
Preference number: 6 (lower is better)
Translates to: RGPTPIDVSILHRYA*QWCSTGCWKLLHIS
Trigger: CGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGGACCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS GCA 72 bp CTATCACGAGCACAGTGGATAAAAATGAAGCTCCTGTaGCTCCATATTCTGGGTCAACTTCAATACCCATCA +
Preference number: 6 (lower is better)
Translates to: LSRAQWIKMKLL*LHILGQLQYPS
Trigger: TGATGGGTATTGAAGTTGACCCAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS GCA 72 bp TCCCACTCCTATAGACGTCAGTATTCTGCATCGATATaGTTTGCAATGGTGTTCAACTGGATGTTGGAAGCT +
Preference number: 6 (lower is better)
Translates to: SHSYRRQYSASI*FAMVFNWMLEA
Trigger: AGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTATAGGAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CAA 72 bp ATGAATGGCTTTCCAGCTTCTAAAAGCCTAGCAGCATaGTATGTTAGTAATCTTGCAGCTTCCAGCTGGGTG +
Preference number: 6 (lower is better)
Translates to: MNGFPASKSLAA*YVSNLAASSWV
Trigger: CACCCAGCTGGAAGCTGCAAGATTACTAACATACAATGCTGCTAGGCTTTTAGAAGCTGGAAAGCCATTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS CCA 72 bp CATCAACTTTGGCTAATTCCTCTATCACGAGCACAGTaGATAAAAATGAAGCTCCTGTGCCTCCATATTCTG +
Preference number: 6 (lower is better)
Translates to: HQLWLIPLSRAQ*IKMKLLCLHIL
Trigger: CAGAATATGGAGGCACAGGAGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAGCCAAAGTTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS CAA 72 bp TGGATCTCACAAAAGACAGCCACAGATGCATCAACTTaGGCTAATTCCTCTATCACGAGCACAGTGGATAAA +
Preference number: 6 (lower is better)
Translates to: WISQKTATDAST*ANSSITSTVDK
Trigger: TTTATCCACTGTGCTCGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS CAA 72 bp GAGACTCCCTATGGCATACTTATAGCCATGTCCAATTaGTCCCAAGATATTGGCTTCTGGAACCTTGACATT +
Preference number: 6 (lower is better)
Translates to: ETPYGILIAMSN*SQDIGFWNLDI
Trigger: AATGTCAAGGTTCCAGAAGCCAATATCTTGGGACAAATTGGACATGGCTATAAGTATGCCATAGGGAGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS CAA 72 bp ACTCCTATAGACGTCAGTATTCTGCATCGATATGCTTaGCAATGGTGTTCAACTGGATGTTGGAAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: TPIDVSILHRYA*QWCSTGCWKLL
Trigger: AAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTATAGGAGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CAA 90 bp CAGTATTCTGCATCGATATGCTTTGCAATGGTGTTCAACTGGATGTaGGAAGCTCCTTCATATATCGTACCAATCTTTGCATCTCGGAAG +
Preference number: 6 (lower is better)
Translates to: QYSASICFAMVFNWM*EAPSYIVPIFASRK
Trigger: CTTCCGAGATGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CAA 72 bp GCATCGATATGCTTTGCAATGGTGTTCAACTGGATGTaGGAAGCTCCTTCATATATCGTACCAATCTTTGCA +
Preference number: 6 (lower is better)
Translates to: ASICFAMVFNWM*EAPSYIVPIFA
Trigger: TGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CAA 90 bp AATGTGTTCTGGATCTCACAAAAGACAGCCACAGATGCATCAACTTaGGCTAATTCCTCTATCACGAGCACAGTGGATAAAAATGAAGCT +
Preference number: 6 (lower is better)
Translates to: NVFWISQKTATDAST*ANSSITSTVDKNEA
Trigger: AGCTTCATTTTTATCCACTGTGCTCGTGATAGAGGAATTAGCCAAAGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCAGAACACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2
CDS CAA 90 bp ACCTTCATTGAGACTCCCTATGGCATACTTATAGCCATGTCCAATTaGTCCCAAGATATTGGCTTCTGGAACCTTGACATTTTCGAATGT +
Preference number: 6 (lower is better)
Translates to: TFIETPYGILIAMSN*SQDIGFWNLDIFEC
Trigger: ACATTCGAAAATGTCAAGGTTCCAGAAGCCAATATCTTGGGACAAATTGGACATGGCTATAAGTATGCCATAGGGAGTCTCAATGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS CCA 72 bp CATCGATATGCTTTGCAATGGTGTTCAACTGGATGTTaGAAGCTCCTTCATATATCGTACCAATCTTTGCAT +
Preference number: 6 (lower is better)
Translates to: HRYALQWCSTGC*KLLHISYQSLH
Trigger: ATGCAAAGATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CCA 72 bp TATTCTGCATCGATATGCTTTGCAATGGTGTTCAACTaGATGTTGGAAGCTCCTTCATATATCGTACCAATC +
Preference number: 6 (lower is better)
Translates to: YSASICFAMVFN*MLEAPSYIVPI
Trigger: GATTGGTACGATATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CCA 72 bp ATAGACGTCAGTATTCTGCATCGATATGCTTTGCAATaGTGTTCAACTGGATGTTGGAAGCTCCTTCATATA +
Preference number: 6 (lower is better)
Translates to: IDVSILHRYALQ*CSTGCWKLLHI
Trigger: TATATGAAGGAGCTTCCAACATCCAGTTGAACACCATTGCAAAGCATATCGATGCAGAATACTGACGTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000541070.1
CDS CAA 72 bp TTCTTTAATATATGGAATAGTGTAGTCAAAACATCCTaGCGCCAGTCCCAGCATCTGTGCAGCAATTCCTAT +
Preference number: 6 (lower is better)
Translates to: FFNIWNSVVKTS*RQSQHLCSNSY
Trigger: ATAGGAATTGCTGCACAGATGCTGGGACTGGCGCAAGGATGTTTTGACTACACTATTCCATATATTAAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358776.7
ENST00000368869.8
CDS CCA 72 bp CCATGTTTTCTAATCAGTGTGTTAATTAATGTGTTCTaGATCTCACAAAAGACAGCCACAGATGCATCAACT +
Preference number: 6 (lower is better)
Translates to: PCFLISVLINVF*ISQKTATDAST
Trigger: AGTTGATGCATCTGTGGCTGTCTTTTGTGAGATCCAGAACACATTAATTAACACACTGATTAGAAAACATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358776.7
ENST00000368869.8
ENST00000411816.2