Pregenerated sensors for ACADL (Homo sapiens)
Ensembl gene IDs: ENSG00000115361Ensembl transcript IDs: ENST00000233710.4, ENST00000482502.1, ENST00000482523.1, ENST00000498120.5, ENST00000652584.1
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAATTAAAAATGATGGATTATTCTGTGTTCTCAGATGTCAGCAATTaGCAGAACCAAGGCATTCCCTGGTCAGGGTTAGGCAAATACTTA | + |
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Preference number: 1 (lower is better) Translates to: KLKMMDYSVFSDVSN*QNQGIPWSGLGKYL Trigger: TAAGTATTTGCCTAACCCTGACCAGGGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATCATTTTTAATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| 3UTR-3UTR TCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCGGCTTCCAGCTTCAATaGAAGCAGTTCTCACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSGFQLQ*KQFSLS Trigger: GCTGAGTGAGAACTGCTTTCATTGAAGCTGGAAGCC...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| 3UTR TCA 72 bp | ATGATGGATTATTCTGTGTTCTCAGATGTCAGCAATTaGCAGAACCAAGGCATTCCCTGGTCAGGGTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: MMDYSVFSDVSN*QNQGIPWSGLG Trigger: GCCTAACCCTGACCAGGGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| 3UTR-3UTR CAA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCTTTGGCTTCAAAGATTaGTCCTTCCACTGTGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSFGFKD*SFHCVN Trigger: ATTAACACAGTGGAAGGACAAATCTTTGAAGCCAAA...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCGGGAGGACGATCAGCTaGGGCGTCCACCTGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSGRTIS*GVHLWC Trigger: ACACCACAGGTGGACGCCTCAGCTGATCGTCCTCCC...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACGACGGAGGCGACTCTaGGGCTACTCGGCGACTCGG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLRRRRL*GYSATR Trigger: CCGAGTCGCCGAGTAGCCGCAGAGTCGCCTCCGTCG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATCTTCCCCTCCGGAATaGGAACATCGCGCGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLSSPPE*EHRAAG Trigger: GCCCGCCGCGCGATGTTCTCATTCCGGAGGGGAAGA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATCCCTCGGAGAAGGCGTaGGGCCATGTCCGAAACACA | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHPSEKA*GHVRNT Trigger: TGTGTTTCGGACATGGCCGCACGCCTTCTCCGAGGG...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACTCCCAGACAATAGCTaGGGAGTACAGATCCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLLPDNS*GVQIPS Trigger: GGAGGGGATCTGTACTCCGCAGCTATTGTCTGGGAG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGAACCAAGGCATTCCCTaGTCAGGGTTAGGCAAATAC | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLNQGIP*SGLGKY Trigger: GTATTTGCCTAACCCTGACCAGGGAATGCCTTGGTT...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGGATGCTCTGCAATATTaGCACCAAGCAGTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLDALQY*HQAVLV Trigger: AACAAGGACTGCTTGGTGTCAATATTGCAGAGCATC...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGGGGAGGGAGCTTCATaGTTTGTGACCGCAACTACA | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHGEGAS*FVTATT Trigger: TGTAGTTGCGGTCACAAATCATGAAGCTCCCTCCCC...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCTCAGATGTCAGCAATTaGCAGAACCAAGGCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSSDVSN*QNQGIP Trigger: GGGAATGCCTTGGTTCTGTCAATTGCTGACATCTGA...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCAAACGTTTCGCTTCATaGAGCTGGAGACAGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSKRFAS*SWRQLS Trigger: GGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTT...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATCCCAATATTTCGCCATaGAAGCAGTGGCGGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHPNISP*KQWRSP Trigger: TGGACTCCGCCACTGCTTGCATGGCGAAATATTGGG...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCTGTACCACCATAGATTaGCTGAACTCTGGCATCCAC | + |
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Preference number: 4 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSCTTID*LNSGIH Trigger: GTGGATGCCAGAGTTCAGCCAATCTATGGTGGTACA...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAATGCACTGTCTGTAGGTaGGCAACTGTTTTGCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: STVVKTTVLGNLEQMVAECTVCR*ATVLPK Trigger: TTTTGGCAAAACAGTTGCTCACCTACAGACAGTGCA...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGGCTTCCAGCTTCAATaGAAGCAGTTCTCACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHGFQLQ*KQFSLS Trigger: GCTGAGTGAGAACTGCTTTCATTGAAGCTGGAAGCC...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGCTCTGTCATTGCTATTaGACCAATACATTTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLLCHCY*TNTFAC Trigger: GCAGGCAAATGTATTGGTGCAATAGCAATGACAGAG...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGATGACAATACCTGAATaGATACTAAAACCTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLMTIPE*ILKPGP Trigger: AGGCCCAGGTTTTAGTATTCATTCAGGTATTGTCAT...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAGAGCTTCATGATTTGTaGCCGCAACTACAATCACAA | + |
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Preference number: 4 (lower is better) Translates to: STVVKTTVLGNLEQMVAEELHDL*PQLQSQ Trigger: TTGTGATTGTAGTTGCGGTCACAAATCATGAAGCTC...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACAAGGCAGTAAGGTATaGTGGCTTCCAGCTTCAATG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLQGSKV*WLPASM Trigger: CATTGAAGCTGGAAGCCATCATACCTTACTGCCTTG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTAAGGCAAATACTTAGCTaGGTCCTAGGGGTTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLRQILS*VLGVSR Trigger: CCTTGAAACCCCTAGGACTCAGCTAAGTATTTGCCT...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGATCCACATAAGCTTTTaGAATTGGGTACTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLIHISF*NWVLPH Trigger: ATGTGGGAGTACCCAATTGCAAAAGCTTATGTGGAT...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAATTGCCTGCAGTCATCTaGGGAATAAAGTGCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: STVVKTTVLGNLEQMVAELPAVI*GIKCLI Trigger: GATTAAGCACTTTATTCCCCAGATGACTGCAGGCAA...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGAGTTCTGCGGTATCCTaGGCTTTTAATCCCATTTTA | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLSSAVS*AFNPIL Trigger: TAAAATGGGATTAAAAGCCCAGGATACCGCAGAACT...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATTCCACCAAGATGCTCTaGAATATTGACACCAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHSTKML*NIDTKQ Trigger: CTGCTTGGTGTCAATATTGCAGAGCATCTTGGTGGA...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGATCTGGGGAATAAAGTaGTTAATCTGTTCTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLIWGIK*LICSSE Trigger: CTCAGAAGAACAGATTAAGCACTTTATTCCCCAGAT...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATTGCACCAATACATTTaGCTGCAGTCATCTGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLLHQYI*LQSSGE Trigger: TTCCCCAGATGACTGCAGGCAAATGTATTGGTGCAA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATTCGCTTCATGCAGCTaGAGACAGTTGTCCACAAAT | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLFASCS*RQLSTN Trigger: ATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCGTGGAAGCTCTTTCATaGTGTAATAGAAGCCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSVEALS*CNRSLY Trigger: ATAAAGGCTTCTATTACATCATGAAAGAGCTTCCAC...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGGACATGACAATACCTaGATGAATACTAAAACCTGG | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHGHDNT*MNTKTW Trigger: CCAGGTTTTAGTATTCATTCAGGTATTGTCATGTCC...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR TCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACATGAATTCACTAGCTaGAATTGCCACATCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLHEFTS*NCHISN Trigger: ATTGCTGATGTGGCAATTTCAGCTAGTGAATTCATG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATACCAATACATTTGCCTaGAGTCATCTGGGGAATAAA | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHTNTFA*SHLGNK Trigger: TTTATTCCCCAGATGACTGCAGGCAAATGTATTGGT...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATCCAGGCTCTGTCATTaGTATTGCACCAATACATTT | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLSRLCH*YCTNTF Trigger: AAATGTATTGGTGCAATAGCAATGACAGAGCCTGGA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTAACAGTTGTCCACAAATaGTCGGGTTACACATATATG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLTVVHK*SGYTYM Trigger: CATATATGTGTAACCCGAGCATTTGTGGACAACTGT...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAAAAGACAATCTCTCTTaGAATCAGCTCCTTCATTAT | + |
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Preference number: 4 (lower is better) Translates to: STVVKTTVLGNLEQMVAEKDNLS*NQLLHY Trigger: ATAATGAAGGAGCTGATTGCAAGAGAGATTGTCTTT...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTAATAAGCTTTTGCAATTaGGTACTCCCACATGTATCC | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLISFCN*VLPHVS Trigger: GGATACATGTGGGAGTACCCAATTGCAAAAGCTTAT...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR GCA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATTCACAGAGATGTTCTaGATAAGCTTTTGTTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLFTEMF*ISFCLK Trigger: CTTCAAACAAAAGCTTATGCAGAACATCTCTGTGAA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CCA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGAAAATGTCATGCTCTaGAGAAAAGATTCTTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHENVML*RKDSSN Trigger: ATTCGAAGAATCTTTTCTCCAGAGCATGACATTTTC...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS TCA 90 bp | CCAGTTTGTCCTGGACAATTCTGGTCCGCGCCGCAGCCCGGGCACTaGGTCCGGGTCCCAAGTTCACTACCGCGCGGCGAGTCTAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PVCPGQFWSAPQPGH*VRVPSSLPRGESKP Trigger: CGGCTTAGACTCGCCGCGCGGTAGTGAACTTGGGACCCGGACTCAGTGCCCGGGCTGCGGCGCGGACCAGAATTGTCCAGGACAAACTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482523.1 |
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| CDS CCA 90 bp | GCCATGCAAGCAGTGGCGGAGTCCAAACGTTTCGCTTCATGCAGCTaGAGACAGTTGTCCACAAATGCTCGGGTTACACATATATGTGTT | + |
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Preference number: 5 (lower is better) Translates to: AMQAVAESKRFASCS*RQLSTNARVTHICV Trigger: AACACATATATGTGTAACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS GCA 90 bp | TATTTCGCCATGCAAGCAGTGGCGGAGTCCAAACGTTTCGCTTCATaGAGCTGGAGACAGTTGTCCACAAATGCTCGGGTTACACATATA | + |
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Preference number: 5 (lower is better) Translates to: YFAMQAVAESKRFAS*SWRQLSTNARVTHI Trigger: TATATGTGTAACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCATGGCGAAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CCA 90 bp | CACTATTTTGTAACTCAGATGCCCAATATTTCGCCATGCAAGCAGTaGCGGAGTCCAAACGTTTCGCTTCATGCAGCTGGAGACAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: HYFVTQMPNISPCKQ*RSPNVSLHAAGDSC Trigger: ACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCATGGCGAAATATTGGGCATCTGAGTTACAAAATAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS GCA 90 bp | CAGACAATAGCTGCGGAGTACAGATCCCCTCCAATTCCACCAAGATaGTCTGCAATATTGACACCAAGCAGTCCTTGTTTTCCAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: QTIAAEYRSPPIPPR*SAILTPSSPCFPAF Trigger: AAAAGCTGGAAAACAAGGACTGCTTGGTGTCAATATTGCAGAGCATCTTGGTGGAATTGGAGGGGATCTGTACTCCGCAGCTATTGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000233710.4 ENST00000498120.5 ENST00000652584.1 |
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| CDS-3UTR CAA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAACTGGGCCTGAACAATTaGAATAAGCTTGCTCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: STVVKTTVLGNLEQMVAELGLNN*NKLAPP Trigger: GGGAGGAGCAAGCTTATTCAAATTGTTCAGGCCCAG...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGCTCCAGGCTCTGTCATaGCTATTGCACCAATACATT | + |
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Preference number: 5 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLLQALS*LLHQYI Trigger: AATGTATTGGTGCAATAGCAATGACAGAGCCTGGAG...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTATGCAGCTGGAGACAGTaGTCCACAAATGCTCGGGTT | + |
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Preference number: 5 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLCSWRQ*STNARV Trigger: AACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCA...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAATTGTACCACCATAGATaGGCTGAACTCTGGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: STVVKTTVLGNLEQMVAELYHHR*AELWHP Trigger: TGGATGCCAGAGTTCAGCCAATCTATGGTGGTACAA...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS CCA 90 bp | GGCTCTGTCATTGCTATTGCACCAATACATTTGCCTGCAGTCATCTaGGGAATAAAGTGCTTAATCTGTTCTTCTGAGCCATGGTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: GSVIAIAPIHLPAVI*GIKCLICSSEPWFV Trigger: TACAAACCATGGCTCAGAAGAACAGATTAAGCACTTTATTCCCCAGATGACTGCAGGCAAATGTATTGGTGCAATAGCAATGACAGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233710.4 ENST00000482502.1 ENST00000652584.1 |
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| CDS-3UTR CAA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGTTACTGATGAACACCTaGCTTCCATTGAGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLLLMNT*LPLRIQ Trigger: CTGGATTCTCAATGGAAGCAAGGTGTTCATCAGTAA...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGTGGGCAGATGTCTACTaGTCAAAGACAATCTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLWADVY*SKTISL Trigger: AAGAGAGATTGTCTTTGACAAGTAGACATCTGCCCA...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAACTGTTCTAGGGAATTaGGAGCAAATGGTAGCCGAA | + |
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Preference number: 5 (lower is better) Translates to: STVVKTTVLGNLEQMVAETVLGN*EQMVAE Trigger: TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGT...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACTCAGATGTCAGCAATaGACAGAACCAAGGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLLRCQQ*TEPRHS Trigger: GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS CCA 90 bp | TCTTGCAATCAGCTCCTTCATTATTTCATTTGTACCACCATAGATTaGCTGAACTCTGGCATCCACATAAGCTTTTGCAATTGGGTACTC | + |
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Preference number: 5 (lower is better) Translates to: SCNQLLHYFICTTID*LNSGIHISFCNWVL Trigger: GAGTACCCAATTGCAAAAGCTTATGTGGATGCCAGAGTTCAGCCAATCTATGGTGGTACAAATGAAATAATGAAGGAGCTGATTGCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CCA 90 bp | ATTTGTCCCACATTTGGGCAATGTGAGCCTCACCTTGTCTTTTTCTaGTTTAATAAGGGCTGTTTGGAAGCTAAAACAACCTTTGCCATA | + |
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Preference number: 5 (lower is better) Translates to: ICPTFGQCEPHLVFF*FNKGCLEAKTTFAI Trigger: TATGGCAAAGGTTGTTTTAGCTTCCAAACAGCCCTTATTAAACCAGAAAAAGACAAGGTGAGGCTCACATTGCCCAAATGTGGGACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482502.1 |
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| CDS-3UTR CAA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATAGATGCTCTGCAATATaGACACCAAGCAGTCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHRCSAI*TPSSPC Trigger: ACAAGGACTGCTTGGTGTCAATATTGCAGAGCATCT...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTCTGTCATTGCTATaGCACCAATACATTTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHALSLL*HQYICL Trigger: CAGGCAAATGTATTGGTGCAATAGCAATGACAGAGC...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | AGTACAGTGGTAAAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAATGTAGCTTTCGTCCCTaGATAAATCCTTTCATTCCA | + |
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Preference number: 5 (lower is better) Translates to: STVVKTTVLGNLEQMVAECSFRP*INPFIP Trigger: TGGAATGAAAGGATTTATCAAGGGACGAAAGCTACA...TTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTTTACCACTGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | AAAACCACTGTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATCATCCACATAAGCTTTaGCAATTGGGTACTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: KTTVLGNLEQMVAEMSLHHPHKL*QLGTPT Trigger: TGTGGGAGTACCCAATTGCAAAAGCTTATGTGGATG...ATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAACAGTGGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GAAAGCAGTTCTCACTCAGCAGCGTTTCACAGAGATGTTCTGCATAAGCTTTTGTTTGGCTTCAAAGATTaGTCCTTCCACTGTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: ESSSHSAAFHRDVLHKLLFGFKD*SFHCVN Trigger: ATTAACACAGTGGAAGGACAAATCTTTGAAGCCAAA...CAAAAGCTTATGCAGAACATCTCTGTGAAACGCTGCTGAGTGAGAACTGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS-3UTR CAA 90 bp | GATGGATTATTCTGTGTTCTCAGATGTCAGCAATTGACAGAACCAAGGCATTCCGCCAAAAGCTTTTCTTaGTTTAACATAGTTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: DGLFCVLRCQQLTEPRHSAKSFS*FNIVPG Trigger: ACCAGGAACTATGTTAAACAAAGAAAAGCTTTTGGC...GGAATGCCTTGGTTCTGTCAATTGCTGACATCTGAGAACACAGAATAATCCATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS TCA 90 bp | TTCCTGCCTGAGTCCCTAGATTTAATAGAATTAATGAGTTGTCTTTaGGACATTGTTACCCATGGCATGACTCTGAAAAGAAGGGCTATA | + |
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Preference number: 5 (lower is better) Translates to: FLPESLDLIELMSCL*DIVTHGMTLKRRAI Trigger: TATAGCCCTTCTTTTCAGAGTCATGCCATGGGTAACAATGTCTCAAAGACAACTCATTAATTCTATTAAATCTAGGGACTCAGGCAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482502.1 |
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| CDS-3UTR CAA 90 bp | GTTCTAGGGAATTTGGAGCAAATGGTAGCCGAAATGAGTTTACATGCTAAGTTACAAAGACAATCTCTCTaGCAATCAGCTCCTTCATTA | + |
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Preference number: 5 (lower is better) Translates to: VLGNLEQMVAEMSLHAKLQRQSL*QSAPSL Trigger: TAATGAAGGAGCTGATTGCAAGAGAGATTGTCTTTG...TAACTTAGCATGTAAACTCATTTCGGCTACCATTTGCTCCAAATTCCCTAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000233710.4 |
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| CDS CCA 72 bp | GAACATCGCGCGGCGGGCAGCTGGCGCGGCGCACGGTaGCCGCCCAGGACGCGTAGGGACCCTCGGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: EHRAAGSWRGAR*PPRTRRDPRRR Trigger: CCTTCTCCGAGGGTCCCTACGCGTCCTGGGCGGCCACCGTGCGCCGCGCCAGCTGCCCGCCGCGCGATGTTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000498120.5 |
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| CDS TCA 72 bp | CCTGGACAATTCTGGTCCGCGCCGCAGCCCGGGCACTaGGTCCGGGTCCCAAGTTCACTACCGCGCGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: PGQFWSAPQPGH*VRVPSSLPRGE Trigger: CTCGCCGCGCGGTAGTGAACTTGGGACCCGGACTCAGTGCCCGGGCTGCGGCGCGGACCAGAATTGTCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482523.1 |
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| CDS CCA 72 bp | CTAAGCCGTGGGGAACGCCGGGTTCACAGCTCGAACTaGGACACAGATCGCAGCCCGCGCTCCTGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: LSRGERRVHSSN*DTDRSPRSCSR Trigger: CCGGCTGCAGGAGCGCGGGCTGCGATCTGTGTCCCAGTTCGAGCTGTGAACCCGGCGTTCCCCACGGCTTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482523.1 |
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| CDS CCA 72 bp | GTCCCAAGTTCACTACCGCGCGGCGAGTCTAAGCCGTaGGGAACGCCGGGTTCACAGCTCGAACTGGGACAC | + |
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Preference number: 6 (lower is better) Translates to: VPSSLPRGESKP*GTPGSQLELGH Trigger: GTGTCCCAGTTCGAGCTGTGAACCCGGCGTTCCCCACGGCTTAGACTCGCCGCGCGGTAGTGAACTTGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482523.1 |
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| CDS GCA 72 bp | ATGCAAGCAGTGGCGGAGTCCAAACGTTTCGCTTCATaGAGCTGGAGACAGTTGTCCACAAATGCTCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: MQAVAESKRFAS*SWRQLSTNARV Trigger: AACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CCA 72 bp | GCAGTGGCGGAGTCCAAACGTTTCGCTTCATGCAGCTaGAGACAGTTGTCCACAAATGCTCGGGTTACACAT | + |
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Preference number: 6 (lower is better) Translates to: AVAESKRFASCS*RQLSTNARVTH Trigger: ATGTGTAACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS TCA 72 bp | GCAGAAGGAGTTTCTAGACGTTCTTCCCCTCCGGAATaGGAACATCTTCTCAGTGACGTCTTCCCAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: AEGVSRRSSPPE*EHLLSDVFPNL Trigger: GAGATTTGGGAAGACGTCACTGAGAAGATGTTCTCATTCCGGAGGGGAAGAACGTCTAGAAACTCCTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482523.1 |
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| CDS TCA 72 bp | GGAGGGATAGCATTAGGAGAAAATACCCAATGTAGATaGCGGGTTGATGGGTGCAGCAAACCACCATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: GGIALGENTQCR*RVDGCSKPPWH Trigger: ATGCCATGGTGGTTTGCTGCACCCATCAACCCGTCATCTACATTGGGTATTTTCTCCTAATGCTATCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652584.1 |
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| CDS CAA 90 bp | TCCAATTCCACCAAGATGCTCTGCAATATTGACACCAAGCAGTCCTaGTTTTCCAGCTTTTTCCCAAACCTCCCTACTTACTTCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNSTKMLCNIDTKQS*FSSFFPNLPTYFSS Trigger: GCTGGAGAAGTAAGTAGGGAGGTTTGGGAAAAAGCTGGAAAACAAGGACTGCTTGGTGTCAATATTGCAGAGCATCTTGGTGGAATTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000233710.4 ENST00000498120.5 ENST00000652584.1 |
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| CDS CAA 90 bp | GCAGTGGCGGAGTCCAAACGTTTCGCTTCATGCAGCTGGAGACAGTaGTCCACAAATGCTCGGGTTACACATATATGTGTTTTTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: AVAESKRFASCSWRQ*STNARVTHICVFNS Trigger: AGAATTAAAAACACATATATGTGTAACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTCCGCCACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS GCA 72 bp | CACTATTTTGTAACTCAGATGCCCAATATTTCGCCATaGAAGCAGTGGCGGAGTCCAAACGTTTCGCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: HYFVTQMPNISP*KQWRSPNVSLH Trigger: ATGAAGCGAAACGTTTGGACTCCGCCACTGCTTGCATGGCGAAATATTGGGCATCTGAGTTACAAAATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CAA 72 bp | GAGTCCAAACGTTTCGCTTCATGCAGCTGGAGACAGTaGTCCACAAATGCTCGGGTTACACATATATGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ESKRFASCSWRQ*STNARVTHICV Trigger: AACACATATATGTGTAACCCGAGCATTTGTGGACAACTGTCTCCAGCTGCATGAAGCGAAACGTTTGGACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS GCA 72 bp | AAAACAAGACTCAACCTTAAAAGTCTCCATACTTACTaGTCCTCCCAGACAATAGCTGCGGAGTACAGATCC | + |
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Preference number: 6 (lower is better) Translates to: KTRLNLKSLHTY*SSQTIAAEYRS Trigger: GGATCTGTACTCCGCAGCTATTGTCTGGGAGGAGCAGTAAGTATGGAGACTTTTAAGGTTGAGTCTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498120.5 |
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| CDS GCA 72 bp | AGGCTCTGTCATTGCTATTGCACCAATACATTTGCCTaGAGTCATCTGGGGAATAAAGTGCTTAATCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RLCHCYCTNTFA*SHLGNKVLNLF Trigger: GAACAGATTAAGCACTTTATTCCCCAGATGACTGCAGGCAAATGTATTGGTGCAATAGCAATGACAGAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233710.4 ENST00000482502.1 ENST00000652584.1 |
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| CDS CCA 72 bp | ACATTTGGGCAATGTGAGCCTCACCTTGTCTTTTTCTaGTTTAATAAGGGCTGTTTGGAAGCTAAAACAACC | + |
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Preference number: 6 (lower is better) Translates to: TFGQCEPHLVFF*FNKGCLEAKTT Trigger: GGTTGTTTTAGCTTCCAAACAGCCCTTATTAAACCAGAAAAAGACAAGGTGAGGCTCACATTGCCCAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482502.1 |
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| CDS CAA 90 bp | CTCTTGCAATCAGCTCCTTCATTATTTCATTTGTACCACCATAGATaGGCTGAACTCTGGCATCCACATAAGCTTTTGCAATTGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: LLQSAPSLFHLYHHR*AELWHPHKLLQLGT Trigger: AGTACCCAATTGCAAAAGCTTATGTGGATGCCAGAGTTCAGCCAATCTATGGTGGTACAAATGAAATAATGAAGGAGCTGATTGCAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CAA 90 bp | CTTCCCCTCCGGAATGAGAACATACCAATGCTGTCATTCGCAAATTaGCCAGTTCCTTCACCCTTATTAAATAATGAATTCTCCATGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPLRNENIPMLSFAN*PVPSPLLNNEFSML Trigger: AAGCATGGAGAATTCATTATTTAATAAGGGTGAAGGAACTGGCAAATTTGCGAATGACAGCATTGGTATGTTCTCATTCCGGAGGGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652584.1 |
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| CDS GCA 72 bp | CCAATACATTTGCCTGCAGTCATCTGGGGAATAAAGTaGTTAATCTGTTCTTCTGAGCCATGGTTTGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: PIHLPAVIWGIK*LICSSEPWFVI Trigger: TATTACAAACCATGGCTCAGAAGAACAGATTAAGCACTTTATTCCCCAGATGACTGCAGGCAAATGTATTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233710.4 ENST00000482502.1 ENST00000652584.1 |
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| CDS CAA 72 bp | CCTCACCTTGTCTTTTTCTGGTTTAATAAGGGCTGTTaGGAAGCTAAAACAACCTTTGCCATATTAGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHLVFFWFNKGC*EAKTTFAILVR Trigger: CCTCACTAATATGGCAAAGGTTGTTTTAGCTTCCAAACAGCCCTTATTAAACCAGAAAAAGACAAGGTGAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000482502.1 |
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| CDS TCA 72 bp | CAGCAATTAACAGCCTTTCCTGTGGAAGCTCTTTCATaGTGTAATAGAAGCCTTTATTCTCTTCTCCAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QQLTAFPVEALS*CNRSLYSLLQV Trigger: TACTTGGAGAAGAGAATAAAGGCTTCTATTACATCATGAAAGAGCTTCCACAGGAAAGGCTGTTAATTGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233710.4 ENST00000652584.1 |
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| CDS CAA 72 bp | CGGAATGAGAACATACCAATGCTGTCATTCGCAAATTaGCCAGTTCCTTCACCCTTATTAAATAATGAATTC | + |
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Preference number: 6 (lower is better) Translates to: RNENIPMLSFAN*PVPSPLLNNEF Trigger: GAATTCATTATTTAATAAGGGTGAAGGAACTGGCAAATTTGCGAATGACAGCATTGGTATGTTCTCATTCCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652584.1 |
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