RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAD8 (Homo sapiens)

Ensembl gene IDs: ENSG00000151498

Ensembl transcript IDs: ENST00000281182.9, ENST00000374752.6, ENST00000524426.5, ENST00000524502.2, ENST00000524547.5, ENST00000524739.1, ENST00000525961.1, ENST00000526026.5, ENST00000527082.5, ENST00000527665.5, ENST00000527713.1, ENST00000528325.5, ENST00000530533.5, ENST00000531338.5, ENST00000533387.5, ENST00000534240.5, ENST00000534433.5

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGGTTCCACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTaGCAACACACAGGGTGCAGGTCCTGCCCTAGAGGAGCTCAGCCC +
Preference number: 1 (lower is better)
Translates to: PVPLGILPQSKTRCW*QHTGCRSCPRGAQP
Trigger: GGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 90 bp GCTCTTCCGGTTCCACTGGGGATTCTGCCCCAGTCCAAGACCCGATaGTGGTGCCAACACACAGGGTGCAGGTCCTGCCCTAGAGGAGCT +
Preference number: 1 (lower is better)
Translates to: ALPVPLGILPQSKTR*WCQHTGCRSCPRGA
Trigger: AGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAACCGGAAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR CCA 90 bp CTTCCGGTTCCACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGCAGGTCCTGCCCTAGAGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: LPVPLGILPQSKTRC*CQHTGCRSCPRGAQ
Trigger: CTGAGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAACCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR CCA 90 bp TGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTaGGCAGCCCCCAGGGAGCAGGAAGCAATATTGATCCTCCCTCCG +
Preference number: 1 (lower is better)
Translates to: CFRTLRWSRVRMTEA*AAPREQEAILILPP
Trigger: CGGAGGGAGGATCAATATTGCTTCCTGCTCCCTGGGGGCTGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 90 bp TTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCT +
Preference number: 1 (lower is better)
Translates to: LILPPFSPLTAMRKP*PSLPILLATGTAQS
Trigger: AGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 90 bp CACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAATTGCAAGTACTGCAGCACAGGGAG +
Preference number: 1 (lower is better)
Translates to: HCCIADHQPRGHQPC*HISQCELQVLQHRE
Trigger: CTCCCTGTGCTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR GCA 90 bp CACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAATTGCAAGTACTGGTTACTGGCCAG +
Preference number: 1 (lower is better)
Translates to: HCCIADHQPRGHQPC*HISQCELQVLVTGQ
Trigger: CTGGCCAGTAACCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR GCA 90 bp CAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTaGCCTAGAGGAGCTCAGCCCTTGGGTCTAATCCATGATTCCTTT +
Preference number: 1 (lower is better)
Translates to: QSKTRCWCQHTGCRS*PRGAQPLGLIHDSF
Trigger: AAAGGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 90 bp GCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTGCAGAGCCACTGCTGCATTGCGGAC +
Preference number: 1 (lower is better)
Translates to: AFICSKELGHGAQGH*ILPLLLQSHCCIAD
Trigger: GTCCGCAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR TCA 90 bp CTTGGGGCCTGGTCCTCCTGTTCGGCACATGACCACATAGATGTCTaGCTCACCAGCACCACTGATGAAGGCCTTGGAGCCATTGAGGAT +
Preference number: 1 (lower is better)
Translates to: LGAWSSCSAHDHIDV*LTSTTDEGLGAIED
Trigger: ATCCTCAATGGCTCCAAGGCCTTCATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTCATGTGCCGAACAGGAGGACCAGGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 90 bp AGTGTGAATTGCAAGTACTGGTTACTGGCCAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCG +
Preference number: 1 (lower is better)
Translates to: SVNCKYWLLARGSPN*FRTLRWSRVRMTEA
Trigger: CGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTTGCAATTCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR CCA 90 bp CCCTTGGGTCTAATCCATGATTCCTTTGGAATAGAGCGGCCCACATaGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCA +
Preference number: 1 (lower is better)
Translates to: PLGLIHDSFGIERPT*HHSTLTAVALNTRP
Trigger: TGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTATTCCAAAGGAATCATGGATTAGACCCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 90 bp AAAGTCTCTTGCTTTTTCTGGTTACTGGCCAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCG +
Preference number: 1 (lower is better)
Translates to: KVSCFFWLLARGSPN*FRTLRWSRVRMTEA
Trigger: CGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGAAAAAGCAAGAGACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR TCA 90 bp GGTGCAGGAGCCTCGGTAAGACATCTCGGAGGCGCCTTTTCTAAGTaGTCCAAAGCTTCAAAGTCTCTTGCTTTTTCTGGTTACTGGCCA +
Preference number: 1 (lower is better)
Translates to: GAGASVRHLGGAFSK*SKASKSLAFSGYWP
Trigger: TGGCCAGTAACCAGAAAAAGCAAGAGACTTTGAAGCTTTGGATCACTTAGAAAAGGCGCCTCCGAGATGTCTTACCGAGGCTCCTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR-3UTR CCA 90 bp CTCCTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 2 (lower is better)
Translates to: LLQSHCCIADHQPRGHQPDALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...AGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTG +
Preference number: 2 (lower is better)
Translates to: ALRTISRAATSLVAISASAMRKP*PSLPIL
Trigger: CAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGC...ACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCRGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR CAA 90 bp AAGTACTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: KYWLLARGSPNCFRT*RWSRVRMTEAWAAP
Trigger: GGGGGCTGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR-3UTR TCA 90 bp CCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCTCGCTCCCAGGCCTTGGAGCCATTaGGGATGTAATGATCTCCCT +
Preference number: 2 (lower is better)
Translates to: PPSVQSSHGNEEALPLAPRPWSH*GCNDLP
Trigger: AGGGAGATCATTACATCCTCAATGGCTCCAAGGCCT...GGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp TGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: CCIADHQPRGHQPCCHISLNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...GCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 2 (lower is better)
Translates to: VAVAPVHLQGLVADGKAFDALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...GAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR CAA 90 bp TTTTTCTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: FFWLLARGSPNCFRT*RWSRVRMTEAWAAP
Trigger: GGGGGCTGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR-3UTR TCA 90 bp CCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAACTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PSGSRSPRASARPGCRWQLNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...TTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTG +
Preference number: 2 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDAMRKP*PSLPIL
Trigger: CAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGC...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp CACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCG +
Preference number: 2 (lower is better)
Translates to: HVLLNSVILQVAVAPVHLLQSHC*IADHQP
Trigger: CGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG...CAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCKQTSP*YRAVGK
Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGTGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: ARGSPNCFRTLRWSRVRMCMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...CATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATTGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDCMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATCAACTATGCATGAGATaGCCTTGGGGCCTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDQLCMR*PWGLVL
Trigger: GAGGACCAGGCCCCAAGGGCATCTCATGCATAGTTG...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 2 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWATARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGTTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACA +
Preference number: 2 (lower is better)
Translates to: VPHVLLNSVILQVAVAPVFRTLR*SRVRMT
Trigger: TGTCATCCTCACCCGAGACCACCTCAATGTCCGGAA...CACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR CAA 90 bp TGCCAACACACAGGGTGCAGGTCCTGCCCTAGAGGAGCTCAGCCCTaGGGTCTAATCCATGATTCCTTTGGAATAGAGCGGCCCACATGG +
Preference number: 2 (lower is better)
Translates to: CQHTGCRSCPRGAQP*GLIHDSFGIERPTW
Trigger: CCATGTGGGCCGCTCTATTCCAAAGGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR TCA 90 bp GTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 2 (lower is better)
Translates to: VPHVLLNSVILQVAVAPVLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...CACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp GTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTTTTCTCCCTTCTTGCCAAAGCTaGGGCCAGGGGTCCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VFEDHSSCWLGVPPHLFLPSCQS*GQGSPS
Trigger: AGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGG...GAGAAAAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp TGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCG +
Preference number: 2 (lower is better)
Translates to: CCIADHQPRGHQPCCHISGGQNL*LCSSFP
Trigger: CGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...GCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp GGACCCTGGAGTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 2 (lower is better)
Translates to: GPWSPARTAEQRNPSGSRDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...ACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp GTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCAGCAGGAAGCAATATTaGTCCTCCCTCCGTTCAGTC +
Preference number: 2 (lower is better)
Translates to: VAVAPVHLQGLVADGKAFSRKQY*SSLRSV
Trigger: GACTGAACGGAGGGAGGATCAATATTGCTTCCTGCT...GAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTTTCCACTGGGGATTCTaGCCCAGTCCAAGACCCGAT +
Preference number: 2 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPFHWGF*PSPRPD
Trigger: ATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAA...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR GCA 90 bp CGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RSPRASARPGCRWQSIHLRGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...CAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGC +
Preference number: 2 (lower is better)
Translates to: SRIRKSISESPQAPRGGISKTRC*CQHTGC
Trigger: GCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGA...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CCA 90 bp GCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTG +
Preference number: 2 (lower is better)
Translates to: AEQRNPSGSRSPRASARPHGTER*AKFVPL
Trigger: CAGAGGCACAAATTTTGCCCACCGCTCTGTACCATG...AGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GCAATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 2 (lower is better)
Translates to: AILILPPFSPLTAMRKPCRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...GCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp AATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCG +
Preference number: 2 (lower is better)
Translates to: NPSGSRSPRASARPGCRWGGQNL*LCSSFP
Trigger: CGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...CCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp CCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: PQGQHSLRRSQLVLAGSSPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...GGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp TTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: LATGTAQSSKITARVGWEPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...CTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACCTCCTGCAGAGCCACTaGTGCATTGCGGACCATCAG +
Preference number: 2 (lower is better)
Translates to: DGKAFICSKELGHGAQGHLLQSH*CIADHQ
Trigger: CTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTATCACTCCCACTTCCTaGTTCAGTGAGGCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: GHRDSTVFEDHSSCWLGVITPTS*FSEAVG
Trigger: TCCTACTGCCTCACTGAACCAGGAAGTGGGAGTGAT...AACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp GCAATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCAGGCCTTGGAGCCATTaGGGATGTAATGATCTCCCT +
Preference number: 2 (lower is better)
Translates to: AILILPPFSPLTAMRKPCRPWSH*GCNDLP
Trigger: AGGGAGATCATTACATCCTCAATGGCTCCAAGGCCT...GCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR TCA 90 bp GCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 2 (lower is better)
Translates to: APNSVGHRDSTVFEDHSSLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...CGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTCCTTCCTCTCCTCCTaGAGAGCCACTGCTGCATTG +
Preference number: 2 (lower is better)
Translates to: DGKAFICSKELGHGAQGHSFLSS*RATAAL
Trigger: CAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGA...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp CACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGTCAGCCAGTGTGAATTaGAAGTACTGGTTACTGGCC +
Preference number: 2 (lower is better)
Translates to: HVLLNSVILQVAVAPVHLSASVN*KYWLLA
Trigger: GGCCAGTAACCAGTACTTGCAATTCACACTGGCTGA...CAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR-3UTR CCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 2 (lower is better)
Translates to: DGKAFICSKELGHGAQGHTARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAAAGACCCGATGCTGGTaGCAACACACAGGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: GLSWFDGESSLVTLLALGKTRCW*QHTGCR
Trigger: CCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTT...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR GCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGACAGTCCAAGACCCGATaGTGGTGCCAACACACAGGG +
Preference number: 2 (lower is better)
Translates to: GLSWFDGESSLVTLLALGQSKTR*WCQHTG
Trigger: CCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTG...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR GCA 90 bp CCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCCACACATGTTGTGGATaGTTATATAGGCTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: PQGQHSLRRSQLVLAGSSHTCCG*LYRLWC
Trigger: GCACCACAGCCTATATAAGCATCCACAACATGTGTG...GGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR-3UTR CCA 90 bp ATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 2 (lower is better)
Translates to: MAKHSSVAKSLAMEHKATRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...AGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGTGCTTTTTCTGGTTACTaGCCAGAGGCTCTCCAAACT +
Preference number: 2 (lower is better)
Translates to: VAPVHLQGLVADGKAFICAFSGY*PEALQT
Trigger: AGTTTGGAGAGCCTCTGGCCAGTAACCAGAAAAAGC...ACAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR-3UTR TCA 90 bp TTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGATGGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 2 (lower is better)
Translates to: FLPKLRPGVPFSTTMHEMDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...CATCTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGC +
Preference number: 2 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFSKTRC*CQHTGC
Trigger: GCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGA...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CCA 90 bp TCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTCCCACTTCCTAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: SPCFLAEVRREAASLPLPKQTSP*YRAVGK
Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...AGGAAGTGGGAGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACATCACTCCCACTTCCTaGTTCAGTGAGGCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: DGKAFICSKELGHGAQGHITPTS*FSEAVG
Trigger: TCCTACTGCCTCACTGAACCAGGAAGTGGGAGTGAT...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR GCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCCACTCAACACTGACTaGAGTCGCACTGAACACCAG +
Preference number: 2 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFPLNTD*SRTEHQ
Trigger: CTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACCACTCAACACTGACTaGAGTCGCACTGAACACCAG +
Preference number: 2 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAPLNTD*SRTEHQ
Trigger: CTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCAAGAAAGGACTTTCATaGTTTGACGGTGAATCTTCA +
Preference number: 2 (lower is better)
Translates to: SRIRKSISESPQAPRGGIKKGLS*FDGESS
Trigger: TGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTT...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CCA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGATAGAGCGGCCCACATaGCACCACTCAACACTGACT +
Preference number: 2 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLIERPT*HHSTLT
Trigger: AGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR GCA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGCCCTTCCCACACCTTTaGTCTAGAATCAGGAAGAGC +
Preference number: 2 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLPFPHL*SRIRKS
Trigger: GCTCTTCCTGATTCTAGAGCAAAGGTGTGGGAAGGG...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR TCA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGCTTGGGTCTAATCCATaGTTCCTTTGGAATAGAGCG +
Preference number: 2 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLLGSNP*FLWNRA
Trigger: CGCTCTATTCCAAAGGAATCATGGATTAGACCCAAG...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp CACTGCATCCTTCCTCTCCTCCTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCGCGCGGCCACCAGCCT +
Preference number: 3 (lower is better)
Translates to: HCILPLLLQSHC*IADHQPRGHQP
Trigger: AGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGATGCAGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 3 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCNCFRT*RWSRVR
Trigger: CCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp GTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGAGAGCCACTGCTGCATaGCGGACCATCAGCCGCGCG +
Preference number: 3 (lower is better)
Translates to: VPHVLLNSVILQVAVAPVRATAA*RTISRA
Trigger: CGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCT...CACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 72 bp CTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTaGCAACACACAGGGTGCAGGTCCTGCCCTAGAGGA +
Preference number: 3 (lower is better)
Translates to: LGILPQSKTRCW*QHTGCRSCPRG
Trigger: TCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp GTTCCACTGGGGATTCTGCCCCAGTCCAAGACCCGATaGTGGTGCCAACACACAGGGTGCAGGTCCTGCCCT +
Preference number: 3 (lower is better)
Translates to: VPLGILPQSKTR*WCQHTGCRSCP
Trigger: AGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR CCA 72 bp CCACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGCAGGTCCTGCCCTAGA +
Preference number: 3 (lower is better)
Translates to: PLGILPQSKTRC*CQHTGCRSCPR
Trigger: TCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR CCA 72 bp GCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACAGAGGCGTGGGCAGCC +
Preference number: 3 (lower is better)
Translates to: ARGSPNCFRTLR*SRVRMTEAWAA
Trigger: GGCTGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 72 bp CCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTGTTGGCCACAGGGACA +
Preference number: 3 (lower is better)
Translates to: PPFSPLTAMRKP*PSLPILLATGT
Trigger: TGTCCCTGTGGCCAACAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 72 bp ACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTaGCCTAGAGGAGCTCAGCCCTTGGGTCTAATCCAT +
Preference number: 3 (lower is better)
Translates to: TRCWCQHTGCRS*PRGAQPLGLIH
Trigger: ATGGATTAGACCCAAGGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CAA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATATGCATGAGATGCCCTaGGGGCCTGGTCCTCCTGTT +
Preference number: 3 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDMHEMP*GPGPPV
Trigger: AACAGGAGGACCAGGCCCCAAGGGCATCTCATGCAT...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGAGAGGAGCTCAGCCCTaGGGTCTAATCCATGATTCC +
Preference number: 3 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVRGAQP*GLIHDS
Trigger: GGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCT...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp TCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTaGCCCAGTCCAAGACCCGATGCTGGTGCCAACACA +
Preference number: 3 (lower is better)
Translates to: SSVQLFRFHWGF*PSPRPDAGANT
Trigger: TGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp TGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTGCAGAGCCACTGCTGC +
Preference number: 3 (lower is better)
Translates to: CSKELGHGAQGH*ILPLLLQSHCC
Trigger: GCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR TCA 72 bp GCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTaGATTGCAAGTACTGCAGCACAGGGAGCAGAGAAC +
Preference number: 3 (lower is better)
Translates to: ARPPALLPYQPV*IASTAAQGAEN
Trigger: GTTCTCTGCTCCCTGTGCTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR GCA 72 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAATTGCAAGTACTGCAG +
Preference number: 3 (lower is better)
Translates to: IADHQPRGHQPC*HISQCELQVLQ
Trigger: CTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR TCA 72 bp TGGTCCTCCTGTTCGGCACATGACCACATAGATGTCTaGCTCACCAGCACCACTGATGAAGGCCTTGGAGCC +
Preference number: 3 (lower is better)
Translates to: WSSCSAHDHIDV*LTSTTDEGLGA
Trigger: GGCTCCAAGGCCTTCATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTCATGTGCCGAACAGGAGGACCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR GCA 72 bp AATAGAGCGGCCCACATGGCACCACTCAACACTGACTaGAGTCGCACTGAACACCAGGCCAGAACAAGTGTG +
Preference number: 3 (lower is better)
Translates to: NRAAHMAPLNTD*SRTEHQARTSV
Trigger: CACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp TGCAAGTACTGGTTACTGGCCAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGGTCTCGGGTGAGGATG +
Preference number: 3 (lower is better)
Translates to: CKYWLLARGSPN*FRTLRWSRVRM
Trigger: CATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR GCA 72 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAATTGCAAGTACTGGTT +
Preference number: 3 (lower is better)
Translates to: IADHQPRGHQPC*HISQCELQVLV
Trigger: AACCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR CCA 72 bp CCTGCCAGAACAGCTCTTCTAGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCTGAACAGCGTAATCCT +
Preference number: 3 (lower is better)
Translates to: PARTALLESGGP*SPARTAEQRNP
Trigger: AGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGAGCTGTTCTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR-3UTR CAA 90 bp AATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGATCAGCCAGTGTGAATaGCAAGTACTGGTTACTGGC +
Preference number: 3 (lower is better)
Translates to: NPSGSRSPRASARPGCRWISQCE*QVLVTG
Trigger: GCCAGTAACCAGTACTTGCAATTCACACTGGCTGAT...CCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR GCA 72 bp TGCTTTTTCTGGTTACTGGCCAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGGTCTCGGGTGAGGATG +
Preference number: 3 (lower is better)
Translates to: CFFWLLARGSPN*FRTLRWSRVRM
Trigger: CATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAGAAAAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR-3UTR CAA 90 bp ATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 3 (lower is better)
Translates to: MAKHSSVAKSLAMEHKATRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...AGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp CGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTGAATTGCAAGTACTGCAGGAGCAGGAAGCAATATaGATCCTCCCTCCGTTCAGT +
Preference number: 3 (lower is better)
Translates to: RGHQPCCHISQCELQVLQEQEAI*ILPPFS
Trigger: ACTGAACGGAGGGAGGATCAATATTGCTTCCTGCTC...CTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR CCA 72 bp CTAATCCATGATTCCTTTGGAATAGAGCGGCCCACATaGCACCACTCAACACTGACTGCAGTCGCACTGAAC +
Preference number: 3 (lower is better)
Translates to: LIHDSFGIERPT*HHSTLTAVALN
Trigger: GTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTATTCCAAAGGAATCATGGATTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CAA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCAAGGACTTTCATGGTTaGACGGTGAATCTTCACTGG +
Preference number: 3 (lower is better)
Translates to: SRIRKSISESPQAPRGGIKDFHG*TVNLHW
Trigger: CCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTT...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR GCA 72 bp CTTGTTGCCATATCAGCCAGTGTGAATTGCAAGTACTaGAGCACAGGGAGCAGAGAACCAGACAAGACTGAG +
Preference number: 3 (lower is better)
Translates to: LVAISASVNCKY*STGSREPDKTE
Trigger: CTCAGTCTTGTCTGGTTCTCTGCTCCCTGTGCTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR CCA 72 bp GCAGTAGGAAGCAAACTTCTCCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTGTTCCTCATTTCCGAA +
Preference number: 3 (lower is better)
Translates to: AVGSKLLHGTER*AKFVPLFLISE
Trigger: TTCGGAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTTCCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR-3UTR CAA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGAGAGGAGCTCAGCCCTaGGGTCTAATCCATGATTCC +
Preference number: 3 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVRGAQP*GLIHDS
Trigger: GGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCT...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
3UTR-3UTR CAA 90 bp ACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCATTTCAGCGGTGGGCAAAATTaGTGCCTCTGTTCCTCATTT +
Preference number: 3 (lower is better)
Translates to: TSPWYRAVGKICASVPHFSGGQN*CLCSSF
Trigger: AAATGAGGAACAGAGGCACAAATTTTGCCCACCGCT...GAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
3UTR TCA 72 bp GCCTCGGTAAGACATCTCGGAGGCGCCTTTTCTAAGTaGTCCAAAGCTTCAAAGTCTCTTGCTTTTTCTGGT +
Preference number: 3 (lower is better)
Translates to: ASVRHLGGAFSK*SKASKSLAFSG
Trigger: ACCAGAAAAAGCAAGAGACTTTGAAGCTTTGGATCACTTAGAAAAGGCGCCTCCGAGATGTCTTACCGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524426.5
3UTR GCA 72 bp TTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTaGATCTGTAGCTGTGGCACAGAGAACGACACAGAC +
Preference number: 3 (lower is better)
Translates to: FTFRGVLSRETF*ICSCGTENDTD
Trigger: GTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCCGAAAGGGACGAAGCTaGGGCTCTGGACTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: AALRTISRAATSLVAISARKGRS*GSGLQA
Trigger: GGCCTGGAGTCCAGAGCCGCAGCTTCGTCCCTTTCG...GGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGACTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARLRWPV*TRTRRP
Trigger: CGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAG...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCACTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWALRWPV*TRTRRP
Trigger: CGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAG...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCDALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp CTCCTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: LLQSHCCIADHQPRGHQPDHSSC*LGVPPH
Trigger: GTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATC...AGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp CCTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGCTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PAEPLLHCGPSAARPPALLNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...CAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTLRWPV*TRTRRP
Trigger: CGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAG...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTCCGCATCACATCCACTaGGAACAGCTCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCPHHIH*EQLGRC
Trigger: GCATCGACCGAGCTGTTCCCAGTGGATGTGATGCGG...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR TCA 90 bp AATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGGTCCTCTCACGGCAATaGGGAAGCCCTGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: NPSGSRSPRASARPGCRWVLSRQ*GSPAPR
Trigger: GCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGAC...CCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTG +
Preference number: 4 (lower is better)
Translates to: AALRTISRAATSLVAISAAMRKP*PSLPIL
Trigger: CAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGC...GGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGAGCCACTGCTGCATTaGGGACCATCAGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: AEQRNPSGSRSPRASARPEPLLH*GPSAAR
Trigger: CCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTC...AGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCCTCCTGCAGAGCCACTaGTGCATTGCGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: AALRTISRAATSLVAISALLQSH*CIADHQ
Trigger: CTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG...GGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp AATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCG +
Preference number: 4 (lower is better)
Translates to: NIDPPSVQSSHGNEEALPLRWPV*TRTRRP
Trigger: CGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAG...GGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAGGGTGCAGGTCCTaGCCTAGAGGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARTGCRS*PRGAQP
Trigger: GGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGT...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGCAGTCCAAGACCCGATaGTGGTGCCAACACACAGGG +
Preference number: 4 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLQSKTR*WCQHTG
Trigger: CCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTG...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCTCGCTCCCTTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: PPSVQSSHGNEEALPLAPFRTLR*SRVRMT
Trigger: TGTCATCCTCACCCGAGACCACCTCAATGTCCGGAA...GGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp CCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAACCATGGAAGGGTCGATaGAGGAGGTCAAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PSGSRSPRASARPGCRWQPWKGR*RRSSSG
Trigger: ACCGGAGCTTGACCTCCTGCATCGACCCTTCCATGG...TTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CCA 90 bp CTGCAGAGCCACTGCTGCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LQSHCCIADHQPRGHQPCHGTER*AKFVPL
Trigger: CAGAGGCACAAATTTTGCCCACCGCTCTGTACCATG...ACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWADALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCCTTCTAGAATCTGGTaGACCCTGGAGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVPSRIW*TLESRT
Trigger: CGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGG...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GCATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTAGCTCTTCTAGAATCTaGTGGACCCTGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: ALRTISRAATSLVAISASSSSRI*WTLESR
Trigger: GCGGGACTCCAGGGTCCACCAGATTCTAGAAGAGCT...ACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR GCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAACTATGCATGAGATaGCCTTGGGGCCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVQLCMR*PWGLVL
Trigger: GAGGACCAGGCCCCAAGGGCATCTCATGCATAGTTG...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTG +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARAMRKP*PSLPIL
Trigger: CAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGC...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTTTTCTCGAGCCACTGCTGCATTaGGGACCATCAGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: VFEDHSSCWLGVPPHLFLEPLLH*GPSAAR
Trigger: CCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTC...GAGAAAAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCATGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWACMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARDHSSC*LGVPPH
Trigger: GTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATC...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 4 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTCCTTCTTGCCAAAGCTaGGGCCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPPSCQS*GQGSPS
Trigger: AGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGG...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp AATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCCTTCTTGCCAAAGCTaGGGCCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NIDPPSVQSSHGNEEALPPSCQS*GQGSPS
Trigger: AGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGG...GGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GGACCCTGGAGTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTCAACTATGCATGAGATaGCCTTGGGGCCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GPWSPARTAEQRNPSGSRQLCMR*PWGLVL
Trigger: GAGGACCAGGCCCCAAGGGCATCTCATGCATAGTTG...ACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCGCAATGAGGAAGCCCTaGCCCTCGCTCCCAATTCTG +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTAMRKP*PSLPIL
Trigger: CAGAATTGGGAGCGAGGGGCAGGGCTTCCTCATTGC...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCGHQPC*HISQCE
Trigger: TTCACACTGGCTGATATGGCAACAAGGCTGGTGGCC...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp AGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTCTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: STVFEDHSSCWLGVPPHLLQSHC*IADHQP
Trigger: CGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG...AAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp CTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGTCCTTCCTCTCCTCCTaGAGAGCCACTGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: LNSVILQVAVAPVHLQGLSFLSS*RATAAL
Trigger: CAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGA...CAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTGAQGH*ILPLLL
Trigger: CAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCC...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVTGQRLSKLLPDIEVVSGAQGH*ILPLLL
Trigger: CAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCC...CGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGAACAGCTCGGTCGATaGAGGAGGTCAAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: VGHRDSTVFEDHSSCWLGEQLGR*RRSSSG
Trigger: ACCGGAGCTTGACCTCCTGCATCGACCGAGCTGTTC...TCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTCCTCCGAAGCCTAGCTaGGCTGCCTTCCGCATCACA +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPPPKPS*AAFRIT
Trigger: TGTGATGCGGAAGGCAGCCCAGCTAGGCTTCGGAGG...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGCATGGTACAGAGCGGTaGGCAAAATTTGTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLHGTER*AKFVPL
Trigger: CAGAGGCACAAATTTTGCCCACCGCTCTGTACCATG...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGATCACTCCCACTTCCTaGTTCAGTGAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLITPTS*FSEAVG
Trigger: TCCTACTGCCTCACTGAACCAGGAAGTGGGAGTGAT...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp AATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: NPSGSRSPRASARPGCRWRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...CCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGGCAAGTACTGGTTACTaGCCAGAGGCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLASTGY*PEALQT
Trigger: AGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTTGC...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTESGGP*SPARTA
Trigger: AGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTC...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LSKLLPDIEVVSGEDDRGESGGP*SPARTA
Trigger: AGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTC...GCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
3UTR CAA 72 bp TTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LLARGSPNCFRT*RWSRVRMTEAW
Trigger: CCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAAGAGGTATCAAGACGTaGCAGCCCAGACCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPRGIKT*QPRPAH
Trigger: GTGGGCGGGTCTGGGCTGTCACGTCTTGATACCTCT...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR TCA 90 bp TCCTTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGAGAGGTATCAAGACGTaGCAGCCCAGACCCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SFLPKLRPGVPFSTTMHERGIKT*QPRPAH
Trigger: GTGGGCGGGTCTGGGCTGTCACGTCTTGATACCTCT...CTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR TCA 90 bp CTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGCTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LVTGQRLSKLLPDIEVVSLNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...CGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTAGCAGGAAGCAATATTaGTCCTCCCTCCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCSRKQY*SSLRSV
Trigger: GACTGAACGGAGGGAGGATCAATATTGCTTCCTGCT...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCCATGGAAGGGTCGATaGAGGAGGTCAAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGPWKGR*RRSSSG
Trigger: ACCGGAGCTTGACCTCCTGCATCGACCCTTCCATGG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR GCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCTCGCTCCCAATTCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PPFSPLTAMRKPCPSLPIPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...AATTGGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWARGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCTCCTGCAGAGCCACTaGTGCATTGCGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGLLQSH*CIADHQ
Trigger: CTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCTCCTTCCTCTCCTCCTaGAGAGCCACTGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: PQGQHSLRRSQLVLAGSSSFLSS*RATAAL
Trigger: CAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGA...GGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: APNSVGHRDSTVFEDHSSGAQGH*ILPLLL
Trigger: CAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCC...CGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCTTCCACTGGGGATTCTaGCCCAGTCCAAGACCCGAT +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTFHWGF*PSPRPD
Trigger: ATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAA...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: SRIRKSISESPQAPRGGIDALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTTGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPCMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: HVLLNSVILQVAVAPVHLTARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...CAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGATTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARFRTLR*SRVRMT
Trigger: TGTCATCCTCACCCGAGACCACCTCAATGTCCGGAA...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGGCAAGTACTGGTTACTaGCCAGAGGCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVASTGY*PEALQT
Trigger: AGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTTGC...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGCAAAGAGCTTGGCCATaGAGCACAAGGCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: ARGSPNCFRTLRWSRVRMQRAWP*STRPLH
Trigger: ATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTG...CATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGTGCATCTGCAAGGCCTaGTTGCAGATGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: VPHVLLNSVILQVAVAPVCICKA*LQMAKH
Trigger: ATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCA...CACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCCTACCTTCTAGAATCTaGTGGACCCTGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTLPSRI*WTLESR
Trigger: GCGGGACTCCAGGGTCCACCAGATTCTAGAAGGTAG...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPSKTRC*CQHTGC
Trigger: GCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGA...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GGACCCTGGAGTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGCCGTCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 4 (lower is better)
Translates to: GPWSPARTAEQRNPSGSRLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...ACGGCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp TTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGATGCCTTCTTGCCAAAGCTaGGGCCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: FLPKLRPGVPFSTTMHEMPSCQS*GQGSPS
Trigger: AGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGG...CATCTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp GATGTAATGATCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTGTCCTCTCACGGCAATaGGGAAGCCCTGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: DVMISLFLSGGQKRGSITVLSRQ*GSPAPR
Trigger: GCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGAC...AGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGATCATTACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp CTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAAGCAGGAAGCAATATTaGTCCTCCCTCCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: LQVAVAPVHLQGLVADGKSRKQY*SSLRSV
Trigger: GACTGAACGGAGGGAGGATCAATATTGCTTCCTGCT...TTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp CAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCGTTCAGCTAAGAGTCTaGACGCCTTCGACCTCCGTT +
Preference number: 4 (lower is better)
Translates to: QGQHSLRRSQLVLAGSSTVQLRV*TPSTSV
Trigger: AACGGAGGTCGAAGGCGTTCAGACTCTTAGCTGAAC...GGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR TCA 90 bp CCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCTCGCTCCCAATTCCATATCAGCCAGTGTaGATTGCAAGTACTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPFSPLTAMRKPCPSLPIPYQPV*IASTAA
Trigger: TGCTGCAGTACTTGCAATTCACACTGGCTGATATGG...AATTGGGAGCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR GCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCGGQNL*LCSSFP
Trigger: CGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAGAGCCACTGCTGCATTaGGGACCATCAGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: GLSWFDGESSLVTLLALGEPLLH*GPSAAR
Trigger: CCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTC...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GTGGATGCTTATATAGGCTGTGGTGCTGGTGCAGCCTGTAGCCAAGGCTTCAAACTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: VDAYIGCGAGAACSQGFKLQSHC*IADHQP
Trigger: CGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG...TTTGAAGCCTTGGCTACAGGCTGCACCAGCACCACAGCCTATATAAGCATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR GCA 90 bp TCCTTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGCTCCTGCAGAGCCACTaGTGCATTGCGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: SFLPKLRPGVPFSTTMHELLQSH*CIADHQ
Trigger: CTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG...CTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGTCTGCAAGGCCTGGTTaGAGATGGCAAAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVSARPG*RWQSIH
Trigger: ATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGA...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCAAGACCCGATGCTGGTaGCAACACACAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRIRKSISESPQAPRGGIKTRCW*QHTGCR
Trigger: CCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTT...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTTTCCACTGGGGATTCTaGCCCAGTCCAAGACCCGAT +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGFHWGF*PSPRPD
Trigger: ATCGGGTCTTGGACTGGGGCAGAATCCCCAGTGGAA...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGTTGGACTCCAGGCCCCTaGCAGAACAGCTCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VAPVHLQGLVADGKAFICWTPGP*QNSSSR
Trigger: TCTAGAAGAGCTGTTCTGGCAGGGGCCTGGAGTCCA...ACAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACCCTCCGAAGCCTAGCTaGGCTGCCTTCCGCATCACA +
Preference number: 4 (lower is better)
Translates to: DGKAFICSKELGHGAQGHPPKPS*AAFRIT
Trigger: TGTGATGCGGAAGGCAGCCCAGCTAGGCTTCGGAGG...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp TCGCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTTGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLPILLATGTAQSSKITACMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...AGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: APNSVGHRDSTVFEDHSSTARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...CGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp CAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTTTTCGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: QSSKITARVGWEFHPTFFDHSSC*LGVPPH
Trigger: GTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATC...GAAAAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCTTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: LSKLLPDIEVVSGEDDRGFRTLR*SRVRMT
Trigger: TGTCATCCTCACCCGAGACCACCTCAATGTCCGGAA...GCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCCAAAGAGCTTGGCCATaGAGCACAAGGCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTQRAWP*STRPLH
Trigger: ATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTG...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGATGCATCTGCAAGGCCTaGTTGCAGATGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARCICKA*LQMAKH
Trigger: ATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCA...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCATAGAGCGGCCCACATaGCACCACTCAACACTGACT +
Preference number: 4 (lower is better)
Translates to: IERPTWHHSTLTAVALNTIERPT*HHSTLT
Trigger: AGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCATTTCACGAAGCTGCGGCTCTaGACTCCAGGCCCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TSPWYRAVGKICASVPHFTKLRL*TPGPCQ
Trigger: CTGGCAGGGGCCTGGAGTCCAGAGCCGCAGCTTCGT...GAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTAGGCACACATGCTTCTaGTCCCACTCTGCCATATTT +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCRHTCF*SHSAIF
Trigger: AAATATGGCAGAGTGGGACCAGAAGCATGTGTGCCT...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR TCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTCCAAGGCTTCAAAAATaGCAGAGGTATCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCPRLQK*QRYQDV
Trigger: CACGTCTTGATACCTCTGTCATTTTTGAAGCCTTGG...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR TCA 90 bp GTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: VGHRDSTVFEDHSSCWLGDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...TCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp CGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 4 (lower is better)
Translates to: RSPRASARPGCRWQSIHLLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...CAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTCCATATCAGCCAGTGTaGATTGCAAGTACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: IADHQPRGHQPCCHISQCPYQPV*IASTGY
Trigger: GTAACCAGTACTTGCAATTCACACTGGCTGATATGG...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR GCA 90 bp CTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCCTTCTGGTCCCACTCTaGCATATTTGGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LSKLLPDIEVVSGEDDRGLLVPL*HIWSHL
Trigger: GAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAG...GCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAGAGCCACTGCTGCATTaGGGACCATCAGCCGCGCGG +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAEPLLH*GPSAAR
Trigger: CCGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTC...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCATCCTTCCTCTCCTCCTaGAGAGCCACTGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPSFLSS*RATAAL
Trigger: CAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGA...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGATCTGCAAGGCCTGGTTaGAGATGGCAAAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: AHMAPLNTDCSRTEHQARSARPG*RWQSIH
Trigger: ATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGA...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATTCTGCAAGGCCTGGTTaGAGATGGCAAAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDSARPG*RWQSIH
Trigger: ATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGA...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGTCTGCAAGGCCTGGTTaGAGATGGCAAAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: ARGSPNCFRTLRWSRVRMSARPG*RWQSIH
Trigger: ATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGA...CATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCCACTCAACACTGACTaGAGTCGCACTGAACACCAG +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGPLNTD*SRTEHQ
Trigger: CTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACC +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAEVKLR*PVWTRT
Trigger: GGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTC...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: VAVAPVHLQGLVADGKAFKQTSP*YRAVGK
Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...GAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp CTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGCAAGTACTGGTTACTaGCCAGAGGCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LVTGQRLSKLLPDIEVVSASTGY*PEALQT
Trigger: AGTTTGGAGAGCCTCTGGCCAGTAACCAGTACTTGC...CGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTCAAAGAGCTTGGCCATaGAGCACAAGGCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPQRAWP*STRPLH
Trigger: ATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTG...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGCCTTCTAGAATCTGGTaGACCCTGGAGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRPSRIW*TLESRT
Trigger: CGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGG...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTCCCACTTCCTTCTTCTAGAATCTGGTaGACCCTGGAGTCCCGCACG +
Preference number: 4 (lower is better)
Translates to: SPCFLAEVRREAASLPLPSSRIW*TLESRT
Trigger: CGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGA...AGGAAGTGGGAGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp GGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGTCTCTTGCTTTTTCTaGTTACTGGCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GQRLSKLLPDIEVVSGEDVSCFF*LLARGS
Trigger: AGAGCCTCTGGCCAGTAACCAGAAAAAGCAAGAGAC...ATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR TCA 90 bp AGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: STVFEDHSSCWLGVPPHLDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...AAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGTCCTCTCACGGCAATaGGGAAGCCCTGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVVLSRQ*GSPAPR
Trigger: GCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGAC...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTTGTGGGTTCTACTCCTaGAGCAGGCTTCTAGAGATC +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGCGFYS*SRLLEI
Trigger: GATCTCTAGAAGCCTGCTTCAGGAGTAGAACCCACA...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: PQGQHSLRRSQLVLAGSSGGQNL*LCSSFP
Trigger: CGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...GGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPGHQPC*HISQCE
Trigger: TTCACACTGGCTGATATGGCAACAAGGCTGGTGGCC...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAACAGGGTGCAGGTCCTaGCCTAGAGGAGCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVATGCRS*PRGAQP
Trigger: GGGCTGAGCTCCTCTAGGGCAGGACCTGCACCCTGT...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTGAATTGCAAGTACTGCAGTCAGCCAGTGTGAATTaGAAGTACTGCAGCACAGGG +
Preference number: 4 (lower is better)
Translates to: RGHQPCCHISQCELQVLQSASVN*KYCSTG
Trigger: CCCTGTGCTGCAGTACTTGCAATTCACACTGGCTGA...CTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTGGGAACAGCTCCTTCTaGTCCCACTCTGCCATATTT +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGGNSSF*SHSAIF
Trigger: AAATATGGCAGAGTGGGACCAGAAGGAGCTGTTCCC...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGCCGCATCACATCCACTaGGAACAGCTCCTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRPHHIH*EQLLLV
Trigger: GACCAGAAGGAGCTGTTCCCAGTGGATGTGATGCGG...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAGATGCCCTTGGGGCCTaGTCCTCCTGTTCGGCACAT +
Preference number: 4 (lower is better)
Translates to: GLSWFDGESSLVTLLALGDALGA*SSCSAH
Trigger: ATGTGCCGAACAGGAGGACCAGGCCCCAAGGGCATC...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRTARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTAGGCCAGAACAAGTGTaGGTTCTACTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPRPEQV*VLLLKQ
Trigger: CTGCTTCAGGAGTAGAACCCACACTTGTTCTGGCCT...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCATAGAGCGGCCCACATaGCACCACTCAACACTGACT +
Preference number: 4 (lower is better)
Translates to: SRIRKSISESPQAPRGGIIERPT*HHSTLT
Trigger: AGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp CTGGTTACTGGCCAGAGGCTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGCTTTTTCTGGTTACTaGCCAGAGGCTCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: LVTGQRLSKLLPDIEVVSAFSGY*PEALQT
Trigger: AGTTTGGAGAGCCTCTGGCCAGTAACCAGAAAAAGC...CGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCTGGCCAGTAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR TCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTCCTCTCACGGCAATaGGGAAGCCCTGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: ENKVVCVLLMFLISPALPVLSRQ*GSPAPR
Trigger: GCGAGGGGCAGGGCTTCCTCATTGCCGTGAGAGGAC...CGGAAGAGCTGGACTGATGAGAAACATCAGAAGAACACATACTACCTTGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCCTTCTGGTCCCACTCTaGCATATTTGGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: SRIRKSISESPQAPRGGILLVPL*HIWSHL
Trigger: GAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAG...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR GCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTGGTGGGCAAAATTTGTaGCTCTGTTCCTCATTTCCG +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPGGQNL*LCSSFP
Trigger: CGGAAATGAGGAACAGAGGCACAAATTTTGCCCACC...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR GCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRRGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTTCAGCCAGTGTGAATTaGAAGTACTGGTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGSASVN*KYWLLA
Trigger: GGCCAGTAACCAGTACTTGCAATTCACACTGGCTGA...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTTCAGCCAGTGTGAATTaGAAGTACTGGTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPSASVN*KYWLLA
Trigger: GGCCAGTAACCAGTACTTGCAATTCACACTGGCTGA...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DGKAFICSKELGHGAQGHGHQPC*HISQCE
Trigger: TTCACACTGGCTGATATGGCAACAAGGCTGGTGGCC...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFLQSHC*IADHQP
Trigger: CGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGTCCTCATCACTTCATTaGTACCTTCTAGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVSSSLH*YLLESG
Trigger: ACCAGATTCTAGAAGGTAGCAATGAAGTGATGAGGA...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp AATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: NIDPPSVQSSHGNEEALPKQTSP*YRAVGK
Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...GGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp TCGCTCCCAATTCTGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTATCACTCCCACTTCCTaGTTCAGTGAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SLPILLATGTAQSSKITAITPTS*FSEAVG
Trigger: TCCTACTGCCTCACTGAACCAGGAAGTGGGAGTGAT...AGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GCCATTGAGGATGTAATGATCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCCGCTCCCAATTCTGTTaGCCACAGGGACAGCACAGT +
Preference number: 4 (lower is better)
Translates to: AIEDVMISLFLSGGQKRGRSQFC*PQGQHS
Trigger: ACTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCG...GCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGATCATTACATCCTCAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR TCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCCATATCAGCCAGTGTaGATTGCAAGTACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGPYQPV*IASTGY
Trigger: GTAACCAGTACTTGCAATTCACACTGGCTGATATGG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCACACATGTTGTGGATaGTTATATAGGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGHTCCG*LYRLWC
Trigger: GCACCACAGCCTATATAAGCATCCACAACATGTGTG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR GCA 90 bp AGCAAACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKLLHGTERWAKFVPLFLRGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...GAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTTTTCTCTCAGCCAGTGTGAATTaGAAGTACTGGTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: VFEDHSSCWLGVPPHLFLSASVN*KYWLLA
Trigger: GGCCAGTAACCAGTACTTGCAATTCACACTGGCTGA...GAGAAAAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR GCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGCTGCAGAGCCACTGCTaGATTGCGGACCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVLQSHC*IADHQP
Trigger: CGGCTGATGGTCCGCAATGCAGCAGTGGCTCTGCAG...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCTCCTGCAGAGCCACTaGTGCATTGCGGACCATCAG +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFLLQSH*CIADHQ
Trigger: CTGATGGTCCGCAATGCAGCAGTGGCTCTGCAGGAG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGATCCTTCCTCTCCTCCTaGAGAGCCACTGCTGCATTG +
Preference number: 4 (lower is better)
Translates to: GLSWFDGESSLVTLLALGSFLSS*RATAAL
Trigger: CAATGCAGCAGTGGCTCTGCAGGAGGAGAGGAAGGA...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAAAGACCCGATGCTGGTaGCAACACACAGGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAKTRCW*QHTGCR
Trigger: CCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTT...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGCCCTTCCCACACCTTTaGTCTAGAATCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRPFPHL*SRIRKS
Trigger: GCTCTTCCTGATTCTAGAGCAAAGGTGTGGGAAGGG...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCATCCCACTTCGGTCGATaGAGGAGGTCAAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVASHFGR*RRSSSG
Trigger: ACCGGAGCTTGACCTCCTGCATCGACCGAAGTGGGA...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374752.6
CDS-3UTR GCA 90 bp CTCTCCAAACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCAGCTTCAAAGTCTCTTaGTTTTTCTGGTTACTGGCC +
Preference number: 4 (lower is better)
Translates to: LSKLLPDIEVVSGEDDRGSFKVS*FFWLLA
Trigger: GGCCAGTAACCAGAAAAAGCAAGAGACTTTGAAGCT...GCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTTTGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CCA 90 bp GATGTAATGATCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTCCACTCTGCCATATTTaGAGCCATCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DVMISLFLSGGQKRGSITPLCHI*SHLSGS
Trigger: GCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGG...AGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGATCATTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAAAGCAAACTTCTCCATaGTACAGAGCGGTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPKQTSP*YRAVGK
Trigger: TTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTT...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAGTGAATTGCAAGTACTaGTTACTGGCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPVNCKY*LLARGS
Trigger: AGAGCCTCTGGCCAGTAACCAGTACTTGCAATTCAC...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp ATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTCAAAGAGCTTGGCCATaGAGCACAAGGCCACTGCAT +
Preference number: 4 (lower is better)
Translates to: MAKHSSVAKSLAMEHKATQRAWP*STRPLH
Trigger: ATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTG...AGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp ATGATCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTCCCACTTGCATCTGCAAGGCCTaGTTGCAGATGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: MISLFLSGGQKRGSITPTCICKA*LQMAKH
Trigger: ATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCA...AGTGGGAGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAESGGP*SPARTA
Trigger: AGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTC...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCTCTTCCGGTTCCACTaGGGATTCTGCCCCAGTCCA +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFLFRFH*GFCPSP
Trigger: TGGACTGGGGCAGAATCCCCAGTGGAACCGGAAGAG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVALNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAACTATGCATGAGATaGCCTTGGGGCCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAQLCMR*PWGLVL
Trigger: GAGGACCAGGCCCCAAGGGCATCTCATGCATAGTTG...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp AGCAAACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCCCTTCTCAACAACTATaGATGAGATGCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SKLLHGTERWAKFVPLFLPSQQL*MRCPWG
Trigger: GCCCCAAGGGCATCTCATGCATAGTTGTTGAGAAGG...GAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR GCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGGAGCACAAGGCCACTaGATCCTTCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVGAQGH*ILPLLL
Trigger: CAGGAGGAGAGGAAGGATGCAGTGGCCTTGTGCTCC...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGCAGTCCAAGACCCGATaGTGGTGCCAACACACAGGG +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVQSKTR*WCQHTG
Trigger: CCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTG...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCCACTCTGCCATATTTaGAGCCATCTCTCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFPLCHI*SHLSGS
Trigger: GCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CCA 90 bp AGCAAACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCATCACTCCCACTTCCTaGTTCAGTGAGGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SKLLHGTERWAKFVPLFLITPTS*FSEAVG
Trigger: TCCTACTGCCTCACTGAACCAGGAAGTGGGAGTGAT...GAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGTGCATGAGATGCCCTTaGGGCCTGGTCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVCMRCP*GLVLLF
Trigger: GAACAGGAGGACCAGGCCCCAAGGGCATCTCATGCA...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVATARVG*EFHPTF
Trigger: AAAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGT...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCAC +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVDHSSC*LGVPPH
Trigger: GTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATC...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACTACCTTCTAGAATCTaGTGGACCCTGGAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVALPSRI*WTLESR
Trigger: GCGGGACTCCAGGGTCCACCAGATTCTAGAAGGTAG...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGTCCAAGACCCGATGCTaGTGCCAACACACAGGGTGC +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVSKTRC*CQHTGC
Trigger: GCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGA...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAAGCAGGAAGCAATATTaGTCCTCCCTCCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GLSWFDGESSLVTLLALGSRKQY*SSLRSV
Trigger: GACTGAACGGAGGGAGGATCAATATTGCTTCCTGCT...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGCCATATCAGCCAGTGTaGATTGCAAGTACTGGTTAC +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRPYQPV*IASTGY
Trigger: GTAACCAGTACTTGCAATTCACACTGGCTGATATGG...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGATGGGCGCCTTTTCTAAGTaGTCCAAAGCTTCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FLPKLRPGVPFSTTMHEMGAFSK*SKASKS
Trigger: AGACTTTGAAGCTTTGGATCACTTAGAAAAGGCGCC...CATCTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAAGAGGCTCTCCAAACTaGTTCCGGACATTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVARGSPN*FRTLRW
Trigger: CCACCTCAATGTCCGGAAGCAGTTTGGAGAGCCTCT...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCGGCCACCAGCCTTGTTaGCATATCAGCCAGTGTGAA +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFGHQPC*HISQCE
Trigger: TTCACACTGGCTGATATGGCAACAAGGCTGGTGGCC...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTTCCGGACATTGAGGTaGTCTCGGGTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFFRTLR*SRVRMT
Trigger: TGTCATCCTCACCCGAGACCACCTCAATGTCCGGAA...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TCACTGGTCACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATCTCAACAACTATGCATaGGATGCCCTTGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SLVTLLALGKQGSMCSSDLNNYA*DALGAW
Trigger: CCAGGCCCCAAGGGCATCTCATGCATAGTTGTTGAG...ATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGTGACCAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATCCTTCTTGCCAAAGCTaGGGCCAGGGGTCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHPSCQS*GQGSPS
Trigger: AGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAAGG...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCAGCAGGAAGCAATATTaGTCCTCCCTCCGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFSRKQY*SSLRSV
Trigger: GACTGAACGGAGGGAGGATCAATATTGCTTCCTGCT...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCCCTTCCCACACCTTTaGTCTAGAATCAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFPFPHL*SRIRKS
Trigger: GCTCTTCCTGATTCTAGAGCAAAGGTGTGGGAAGGG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCTTACATTCAGAGGTGTaGTATCCAGAGAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: SRIRKSISESPQAPRGGILHSEV*YPEKPS
Trigger: AGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp GATGAAGGCCTTGGAGCCATTGAGGATGTAATGATCTCCCTGTTTCTTAGCGGAGTGAATTGCAAGTACTaGAGCACAGGGAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: DEGLGAIEDVMISLFLSGVNCKY*STGSRE
Trigger: TTCTCTGCTCCCTGTGCTGCAGTACTTGCAATTCAC...TCCGCTAAGAAACAGGGAGATCATTACATCCTCAATGGCTCCAAGGCCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CCA 90 bp AATCATCCAGGCACACATGTTGTGGATGCTTATATAGGCTGTGGTGCTGGTGCAGTGAATTGCAAGTACTaGTTACTGGCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: NHPGTHVVDAYIGCGAGAVNCKY*LLARGS
Trigger: AGAGCCTCTGGCCAGTAACCAGTACTTGCAATTCAC...TGCACCAGCACCACAGCCTATATAAGCATCCACAACATGTGTGCCTGGATGATT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCATGCATCTGCAAGGCCTaGTTGCAGATGGCAAAGCAT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVACICKA*LQMAKH
Trigger: ATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCA...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGACTTGGGTCTAATCCATaGTTCCTTTGGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: GLSWFDGESSLVTLLALGLGSNP*FLWNRA
Trigger: CGCTCTATTCCAAAGGAATCATGGATTAGACCCAAG...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTTCCACTGGGGATTCTGCCCCAAAGAAAGGACTTTCATaGTTTGACGGTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: SDVSHQSSSSGSTGDSAPKKGLS*FDGESS
Trigger: TGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTT...TGGGGCAGAATCCCCAGTGGAACCGGAAGAGCTGGACTGATGAGAAACATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TCACTGGTCACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATCTCCTGTTCGGCACATaGCCACATAGATGTCTGACT +
Preference number: 4 (lower is better)
Translates to: SLVTLLALGKQGSMCSSDLLFGT*PHRCLT
Trigger: AGTCAGACATCTATGTGGTCATGTGCCGAACAGGAG...ATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGTGACCAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGACAGGCTTCTTAACATaGAACCCAACGAATATTCAA +
Preference number: 4 (lower is better)
Translates to: SRETFCICSCGTENDTDRTGFLT*NPTNIQ
Trigger: TTGAATATTCGTTGGGTTTCATGTTAAGAAGCCTGT...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATCAGTCCAGCTCTTCCGGTGAATTGCAAGTACTaGTTACTGGCCAGAGGCTCT +
Preference number: 4 (lower is better)
Translates to: ENKVVCVLLMFLISPALPVNCKY*LLARGS
Trigger: AGAGCCTCTGGCCAGTAACCAGTACTTGCAATTCAC...CGGAAGAGCTGGACTGATGAGAAACATCAGAAGAACACATACTACCTTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATAGGCCTTGGAGCCATTaGGGATGTAATGATCTCCCT +
Preference number: 4 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHRPWSH*GCNDLP
Trigger: AGGGAGATCATTACATCCTCAATGGCTCCAAGGCCT...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATGACCACATAGATGTCTaGCTCACCAGCACCACTGAT +
Preference number: 4 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHDHIDV*LTSTTD
Trigger: ATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTC...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp GAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATCAGTCCAGCTCTTCCGCTTGGGTCTAATCCATaGTTCCTTTGGAATAGAGCG +
Preference number: 4 (lower is better)
Translates to: ENKVVCVLLMFLISPALPLGSNP*FLWNRA
Trigger: CGCTCTATTCCAAAGGAATCATGGATTAGACCCAAG...CGGAAGAGCTGGACTGATGAGAAACATCAGAAGAACACATACTACCTTGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCATCCTCATCACTTCATTaGTACCTTCTAGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVASSSLH*YLLESG
Trigger: ACCAGATTCTAGAAGGTAGCAATGAAGTGATGAGGA...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCATTACATTCAGAGGTGTaGTATCCAGAGAAACCTTCT +
Preference number: 4 (lower is better)
Translates to: LHSEVCYPEKPSASVAVALHSEV*YPEKPS
Trigger: AGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGAGGCCAGAACAAGTGTaGGTTCTACTCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLRPEQV*VLLLKQ
Trigger: CTGCTTCAGGAGTAGAACCCACACTTGTTCTGGCCT...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR GCA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTCCAGAGAAACCTTCTaGATCTGTAGCTGTGGCACA +
Preference number: 4 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLSRETF*ICSCGT
Trigger: TGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CCA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCAAGAAAGGACTTTCATaGTTTGACGGTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFKKGLS*FDGESS
Trigger: TGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTT...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR TCA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATCCAAGGCTTCAAAAATaGCAGAGGTATCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHPRLQK*QRYQDV
Trigger: CACGTCTTGATACCTCTGTCATTTTTGAAGCCTTGG...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR TCA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGACAGGCTTCTTAACATaGAACCCAACGAATATTCAA +
Preference number: 4 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVTGFLT*NPTNIQ
Trigger: TTGAATATTCGTTGGGTTTCATGTTAAGAAGCCTGT...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp CCCATGGAAGGGTCGATGCAGGAGGTCAAGCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCGAGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: PMEGSMQEVKLRWPV*TRTRRPPGRQPRRA
Trigger: GGCGCGCCTCGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCTTCCATGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281182.9
ENST00000524426.5
ENST00000525961.1
ENST00000527082.5
ENST00000530533.5
ENST00000534433.5
CDS CCA 90 bp CTCCCACTTCGGTCGATGCAGGAGGTCAAGCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCGAGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: LPLRSMQEVKLRWPV*TRTRRPPGRQPRRA
Trigger: GGCGCGCCTCGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAAGTGGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374752.6
ENST00000524547.5
CDS CCA 90 bp GGAACAGCTCGGTCGATGCAGGAGGTCAAGCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCGAGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: GTARSMQEVKLRWPV*TRTRRPPGRQPRRA
Trigger: GGCGCGCCTCGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAGCTGTTCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS CCA 90 bp GGCACACATGGGTCGATGCAGGAGGTCAAGCTCCGGTGGCCGGTCTaGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCGAGGCGCGCC +
Preference number: 5 (lower is better)
Translates to: GTHGSMQEVKLRWPV*TRTRRPPGRQPRRA
Trigger: GGCGCGCCTCGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCATGTGTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533387.5
ENST00000534240.5
CDS CCA 90 bp GCAGCATCACTCCCACTTCGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: AASLPLRSMQEVKLR*PVWTRTRRPPGRQP
Trigger: CGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAAGTGGGAGTGATGCTGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374752.6
ENST00000524547.5
CDS CCA 90 bp CATCCACTGGGAACAGCTCGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: HPLGTARSMQEVKLR*PVWTRTRRPPGRQP
Trigger: CGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAGCTGTTCCCAGTGGATG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS CCA 90 bp AATCATCCAGGCACACATGGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: NHPGTHGSMQEVKLR*PVWTRTRRPPGRQP
Trigger: CGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCATGTGTGCCTGGATGATT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533387.5
ENST00000534240.5
CDS CCA 90 bp TCATTAAGTCCCATGGAAGGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGCAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SLSPMEGSMQEVKLR*PVWTRTRRPPGRQP
Trigger: CGGCTGCCTGCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCTTCCATGGGACTTAATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281182.9
ENST00000524426.5
ENST00000525961.1
ENST00000527082.5
ENST00000530533.5
ENST00000534433.5
CDS-3UTR CAA 90 bp TCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGCAGGTCCTGAGAGCCACTGCTGCATaGCGGACCATCAGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: SAPVQDPMLVPTHRVQVLRATAA*RTISRA
Trigger: CGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCT...CAGGACCTGCACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp ATTCCCAGGCCCACACTAGACCCTCTGGAGCAGAAGCTCTGGGGTTaGGGCCCGCAATCTGCGCTCCCATGCCCTCCAGGCGATTCCAGC +
Preference number: 5 (lower is better)
Translates to: IPRPTLDPLEQKLWG*GPQSALPCPPGDSS
Trigger: GCTGGAATCGCCTGGAGGGCATGGGAGCGCAGATTGCGGGCCTCAACCCCAGAGCTTCTGCTCCAGAGGGTCTAGTGTGGGCCTGGGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS-3UTR CAA 90 bp ATTGCGGACCATCAGCCGCGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTAGAGCCACTGCTGCATaGCGGACCATCAGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: IADHQPRGHQPCCHISQCRATAA*RTISRA
Trigger: CGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCT...ACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGCGGCTGATGGTCCGCAAT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp CTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGCGCGGCCACCAGCCTaGTTGCCATATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LNSVILQVAVAPVHLQGLARPPA*LPYQPV
Trigger: CACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC...CAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGAGCCACTGCTGCATaGCGGACCATCAGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: IERPTWHHSTLTAVALNTRATAA*RTISRA
Trigger: CGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCT...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp ATATTGATCCTCCCTCCGTTCAGTCCTCTCACGGCAATGAGGAAGCCCTGCCCCAGAGCCACTGCTGCATaGCGGACCATCAGCCGCGCG +
Preference number: 5 (lower is better)
Translates to: ILILPPFSPLTAMRKPCPRATAA*RTISRA
Trigger: CGCGCGGCTGATGGTCCGCAATGCAGCAGTGGCTCT...GGGGCAGGGCTTCCTCATTGCCGTGAGAGGACTGAACGGAGGGAGGATCAATAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS GCA 90 bp CCCAGACAGGCGACTCAAAGCCCTCTGCCCCTCTCCCTTATTACCTaGCAGGCAGAAGCTGCCCACAGCCACCCTGGCTGGGATGATAAA +
Preference number: 5 (lower is better)
Translates to: PRQATQSPLPLSLIT*QAEAAHSHPGWDDK
Trigger: TTTATCATCCCAGCCAGGGTGGCTGTGGGCAGCTTCTGCCTGGCAGGTAATAAGGGAGAGGGGCAGAGGGCTTTGAGTCGCCTGTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS GCA 90 bp AATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTaGAGATCTGCAGGGAGACAGGGACTAGACGTCTTGGACTCTGGG +
Preference number: 5 (lower is better)
Translates to: NPSGSRSPRASARPG*RSAGRQGLDVLDSG
Trigger: CCCAGAGTCCAAGACGTCTAGTCCCTGTCTCCCTGCAGATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp CTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAACCCACTCTGCCATATTaGGAGCCATCTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: LQVAVAPVHLQGLVADGKPTLPY*EPSLGQ
Trigger: CTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGG...TTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CAA 90 bp CTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: LNSVILQVAVAPVHLQGLRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...CAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp CTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAGCCCCATCTGCAAGGCCTGGTaGCAGATGGCAAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: LPDIEVVSGEDDRGVGSPICKAW*QMAKHS
Trigger: TGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGAT...GGGGCTGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS CCA 90 bp CCAAGAGTCGTGTCATTTCAAGACTTCCGCACTGGCTGTAGAGAGTaGAGACAGCCAGGCTCCGAGCCCGACCCCAACGGCTTCCATGTT +
Preference number: 5 (lower is better)
Translates to: PRVVSFQDFRTGCRE*RQPGSEPDPNGFHV
Trigger: AACATGGAAGCCGTTGGGGTCGGGCTCGGAGCCTGGCTGTCTCCACTCTCTACAGCCAGTGCGGAAGTCTTGAAATGACACGACTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 90 bp GCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTGGCAAAAATCAGGGACTGCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: ATGTAQSSKITARVG*EFHPTWQKSGTAWL
Trigger: CAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 90 bp GTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCACCTGGCAAAAATCAGGGACTGCGTG +
Preference number: 5 (lower is better)
Translates to: VGHRDSTVFEDHSSC*LGVPPHLAKIRDCV
Trigger: CACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 90 bp TGGTTGCAGATCTGCAGGGAGACAGGGACTAGACGTCTTGGACTCTaGGAAGACTGTGGAGCAAGCAGCTTCCCTTCCTACCCCAGCCCA +
Preference number: 5 (lower is better)
Translates to: WLQICRETGTRRLGL*EDCGASSFPSYPSP
Trigger: TGGGCTGGGGTAGGAAGGGAAGCTGCTTGCTCCACAGTCTTCCCAGAGTCCAAGACGTCTAGTCCCTGTCTCCCTGCAGATCTGCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp ATAGAGCGGCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: IERPTWHHSTLTAVALNTNCFRT*RWSRVR
Trigger: CCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT...GGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp CCCTTCCTACCCCAGCCCACGATCTGGCAGCCCGCCATAAACCCATaGAAGAACCACAAACAGCCAAGCTCAAAGAGGGCCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: PFLPQPTIWQPAINP*KNHKQPSSKRASTF
Trigger: GAATGTGGAGGCCCTCTTTGAGCTTGGCTGTTTGTGGTTCTTTCATGGGTTTATGGCGGGCTGCCAGATCGTGGGCTGGGGTAGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp GTAGCTGTGGCACAGAGAACGACACAGACAGGAGGGCATTCCTCCATTTCCCCTATGCATGAGATGCCCTaGGGGCCTGGTCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VAVAQRTTQTGGHSSISPMHEMP*GPGPPV
Trigger: AACAGGAGGACCAGGCCCCAAGGGCATCTCATGCAT...AGGGGAAATGGAGGAATGCCCTCCTGTCTGTGTCGTTCTCTGTGCCACAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp AGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTTAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: STVFEDHSSCWLGVPPHLNCFRT*RWSRVR
Trigger: CCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT...AAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp GTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGTAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VAPVHLQGLVADGKAFICNCFRT*RWSRVR
Trigger: CCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT...ACAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGGCGCGGCCACCAGCCTaGTTGCCATATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: SRETFCICSCGTENDTDRARPPA*LPYQPV
Trigger: CACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp TCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTaGCAAAAATCAGGGACTGCGTGGTTGCCCAACAATCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: SSKITARVGWEFHPT*QKSGTAWLPNNPAG
Trigger: ACCTGCTGGATTGTTGGGCAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS-3UTR CAA 90 bp GCCCACATGGCACCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAGAGCAGGAAGCAATATaGATCCTCCCTCCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: AHMAPLNTDCSRTEHQAREQEAI*ILPPFS
Trigger: ACTGAACGGAGGGAGGATCAATATTGCTTCCTGCTC...TCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp CGCGGCCACCAGCCTTGTTGCCATATCAGCCAGTGTGAATTGCAAGTACTGCAGTCTGTAGCAAAGAGCTaGGCCATGGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: RGHQPCCHISQCELQVLQSVAKS*AMEHKA
Trigger: GGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGA...CTGCAGTACTTGCAATTCACACTGGCTGATATGGCAACAAGGCTGGTGGCCGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS-3UTR CAA 90 bp AACTGCTTCCGGACATTGAGGTGGTCTCGGGTGAGGATGACAGAGGCGTGGGCAATCTGCAAGGCCTGGTaGCAGATGGCAAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: NCFRTLRWSRVRMTEAWAICKAW*QMAKHS
Trigger: TGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGAT...TGCCCACGCCTCTGTCATCCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS GCA 90 bp AGGAACCAGAGGATGTCAGGAGGAAGCTGGGAACAATCTCCAAAGTaGTCTGGGAGGACGCACGCTAGTACCTTGGAGCCATTGAGGATG +
Preference number: 5 (lower is better)
Translates to: RNQRMSGGSWEQSPK*SGRTHASTLEPLRM
Trigger: CATCCTCAATGGCTCCAAGGTACTAGCGTGCGTCCTCCCAGAGCACTTTGGAGATTGTTCCCAGCTTCCTCCTGACATCCTCTGGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527082.5
CDS-3UTR CAA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGATGCATGAGATGCCCTaGGGGCCTGGTCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: SRETFCICSCGTENDTDRMHEMP*GPGPPV
Trigger: AACAGGAGGACCAGGCCCCAAGGGCATCTCATGCAT...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACATGCATGAGATGCCCTaGGGGCCTGGTCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: DGKAFICSKELGHGAQGHMHEMP*GPGPPV
Trigger: AACAGGAGGACCAGGCCCCAAGGGCATCTCATGCAT...GTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp ATGATCTCCCTGTTTCTTAGCGGAGGTCAGAAGAGAGGCAGCATCACTCCCACTAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: MISLFLSGGQKRGSITPTRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...AGTGGGAGTGATGCTGCCTCTCTTCTGACCTCCGCTAAGAAACAGGGAGATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp TCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCACAGAGAACGACACAGACAGGTCGCTCCCAATTCTGTaGGCCACAGGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: SRETFCICSCGTENDTDRSLPIL*ATGTAQ
Trigger: CTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA...CCTGTCTGTGTCGTTCTCTGTGCCACAGCTACAGATGCAGAAGGTTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp TTCTTGCCAAAGCTGAGGCCAGGGGTCCCCTTCTCAACAACTATGCATGAGATGTCGCTCCCAATTCTGTaGGCCACAGGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: FLPKLRPGVPFSTTMHEMSLPIL*ATGTAQ
Trigger: CTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA...CATCTCATGCATAGTTGTTGAGAAGGGGACCCCTGGCCTCAGCTTTGGCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp CTGAACAGCGTAATCCTTCAGGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGATCAGCCAGTGTGAATaGCAAGTACTGGTTACTGGC +
Preference number: 5 (lower is better)
Translates to: LNSVILQVAVAPVHLQGLISQCE*QVLVTG
Trigger: GCCAGTAACCAGTACTTGCAATTCACACTGGCTGAT...CAGGCCTTGCAGATGCACGGGGGCTACGGCTACCTGAAGGATTACGCTGTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CAA 90 bp GATGAAGGCCTTGGAGCCATTGAGGATGTAATGATCTCCCTGTTTCTTAGCGGAGCGCGGCCACCAGCCTaGTTGCCATATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: DEGLGAIEDVMISLFLSGARPPA*LPYQPV
Trigger: CACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC...TCCGCTAAGAAACAGGGAGATCATTACATCCTCAATGGCTCCAAGGCCTTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp ACTGGGGATTCTGCCCCAGTCCAAGACCCGATGCTGGTGCCAACACACAGGGTGAAGGACTTTCATGGTTaGACGGTGAATCTTCACTGG +
Preference number: 5 (lower is better)
Translates to: TGDSAPVQDPMLVPTHRVKDFHG*TVNLHW
Trigger: CCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTT...CACCCTGTGTGTTGGCACCAGCATCGGGTCTTGGACTGGGGCAGAATCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp GCAGCCTGTAGCCAAGGCTTCAAAAATGACAGAGGTATCAAGACGTaGCAGCCCAGACCCGCCCACATCTGTTTGTATGTAGACCCCTCC +
Preference number: 5 (lower is better)
Translates to: AACSQGFKNDRGIKT*QPRPAHICLYVDPS
Trigger: GGAGGGGTCTACATACAAACAGATGTGGGCGGGTCTGGGCTGTCACGTCTTGATACCTCTGTCATTTTTGAAGCCTTGGCTACAGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000281182.9
ENST00000526026.5
ENST00000528325.5
ENST00000531338.5
ENST00000534433.5
CDS GCA 90 bp TTCCTTTGGAATAGAGCGGCCCACATGGCACCACTCAACACTGACTaGAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTTCTACT +
Preference number: 5 (lower is better)
Translates to: FLWNRAAHMAPLNTD*SRTEHQARTSVGST
Trigger: AGTAGAACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGGTGCCATGTGGGCCGCTCTATTCCAAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281182.9
ENST00000374752.6
ENST00000531338.5
ENST00000533387.5
CDS CCA 90 bp AAGGGGTGCAAAAGGACCAGGGAATGCTTGAGTTCTCACAGCGTCTaGGAACACCACTGGGTCCTCCTGACAATAAGGTCCAATGGCACA +
Preference number: 5 (lower is better)
Translates to: KGCKRTRECLSSHSV*EHHWVLLTIRSNGT
Trigger: TGTGCCATTGGACCTTATTGTCAGGAGGACCCAGTGGTGTTCCCAGACGCTGTGAGAACTCAAGCATTCCCTGGTCCTTTTGCACCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524739.1
ENST00000527082.5
CDS CCA 90 bp GCAGAAGCTGCCCACAGCCACCCTGGCTGGGATGATAAAAAGCTATaGTTCCCCCTAGTGGCAATGCAGCCTGACAATGTAAACATGGCA +
Preference number: 5 (lower is better)
Translates to: AEAAHSHPGWDDKKL*FPLVAMQPDNVNMA
Trigger: TGCCATGTTTACATTGTCAGGCTGCATTGCCACTAGGGGGAACCATAGCTTTTTATCATCCCAGCCAGGGTGGCTGTGGGCAGCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAGCGCGGCCACCAGCCTaGTTGCCATATCAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAARPPA*LPYQPV
Trigger: CACTGGCTGATATGGCAACAAGGCTGGTGGCCGCGC...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GTAGCCCCCGTGCATCTGCAAGGCCTGGTTGCAGATGGCAAAGCATTCATCTGTATCAGCCAGTGTGAATaGCAAGTACTGCAGCACAGG +
Preference number: 5 (lower is better)
Translates to: VAPVHLQGLVADGKAFICISQCE*QVLQHR
Trigger: CCTGTGCTGCAGTACTTGCAATTCACACTGGCTGAT...ACAGATGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS GCA 90 bp TCACGTTGCTTCACCGAAGTCACTCAAAGAAGCCTCTGCCCCTCCTaGTTTTCCAAGAGTCGTGTCATTTCAAGACTTCCGCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: SRCFTEVTQRSLCPS*FSKSRVISRLPHWL
Trigger: CAGCCAGTGCGGAAGTCTTGAAATGACACGACTCTTGGAAAAGCAGGAGGGGCAGAGGCTTCTTTGAGTGACTTCGGTGAAGCAACGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 90 bp AAGGCAGCCTCACGTTGCTTCACCGAAGTCACTCAAAGAAGCCTCTaGCCCTCCTGCTTTTCCAAGAGTCGTGTCATTTCAAGACTTCCG +
Preference number: 5 (lower is better)
Translates to: KAASRCFTEVTQRSL*PSCFSKSRVISRLP
Trigger: CGGAAGTCTTGAAATGACACGACTCTTGGAAAAGCAGGAGGGGCAGAGGCTTCTTTGAGTGACTTCGGTGAAGCAACGTGAGGCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS-3UTR CAA 90 bp GATGAAGGCCTTGGAGCCATTGAGGATGTAATGATCTCCCTGTTTCTTAGCGGAATGCATGAGATGCCCTaGGGGCCTGGTCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: DEGLGAIEDVMISLFLSGMHEMP*GPGPPV
Trigger: AACAGGAGGACCAGGCCCCAAGGGCATCTCATGCAT...TCCGCTAAGAAACAGGGAGATCATTACATCCTCAATGGCTCCAAGGCCTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp ACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTGTTCCTCATTTCTCGCTCCCAATTCTGTaGGCCACAGGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: TSPWYRAVGKICASVPHFSLPIL*ATGTAQ
Trigger: CTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA...GAAATGAGGAACAGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTATCAGCCAGTGTGAATaGCAAGTACTGGTTACTGGC +
Preference number: 5 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGISQCE*QVLVTG
Trigger: GCCAGTAACCAGTACTTGCAATTCACACTGGCTGAT...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp CCACTCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTGGGTCAAAAGTCTCAGCCCTaGATATTGAGGCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: PLNTDCSRTEHQARTSVGQKSQP*ILRQSR
Trigger: TCTGGACTGCCTCAATATCAAGGGCTGAGACTTTTG...ACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp TGGGTCTCAAAGTGTGGTTCTCAGACAAGCTGTGGCAGCCTCACTTaGAGACTTGTTGCAGATACAAATTCCCAGGCCCACACTAGACCC +
Preference number: 5 (lower is better)
Translates to: WVSKCGSQTSCGSLT*RLVADTNSQAHTRP
Trigger: GGGTCTAGTGTGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTTTGAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 90 bp AGAACGTCTAAGCACAAGAAAAACGCCTACCTTCTGGTCCCACTCTaGCATATTTGGAGCCATCTCTCGGGCAGCAAAGTCAAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: RTSKHKKNAYLLVPL*HIWSHLSGSKVKGH
Trigger: GTGGCCTTTGACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGTAGGCGTTTTTCTTGTGCTTAGACGTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525961.1
CDS GCA 90 bp AGGGAAGCCCCATTATATAATGTTTCCAGCAAGGCAGCCTCACGTTaGTTCACCGAAGTCACTCAAAGAAGCCTCTGCCCCTCCTGCTTT +
Preference number: 5 (lower is better)
Translates to: REAPLYNVSSKAASR*FTEVTQRSLCPSCF
Trigger: AAAGCAGGAGGGGCAGAGGCTTCTTTGAGTGACTTCGGTGAAGCAACGTGAGGCTGCCTTGCTGGAAACATTATATAATGGGGCTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 90 bp CACATCCACTGGGAACAGCTCCTTCTGGTCCCACTCTGCCATATTTaGAGCCATCTCTCGGGCAGCAAAGTCAAAGGCCACTTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: HIHWEQLLLVPLCHI*SHLSGSKVKGHFLK
Trigger: TTTCAAAAAGTGGCCTTTGACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGAGCTGTTCCCAGTGGATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000534433.5
CDS CCA 90 bp CTGAGACTTGTGGCCAACACCAGGTCTTCTCTAAGCGTCTCTTCCTaGAGCAACAAAGTGCACCAACGTAAGCAGCTGGATAAGGAACAC +
Preference number: 5 (lower is better)
Translates to: LRLVANTRSSLSVSS*SNKVHQRKQLDKEH
Trigger: GTGTTCCTTATCCAGCTGCTTACGTTGGTGCACTTTGTTGCTCCAGGAAGAGACGCTTAGAGAAGACCTGGTGTTGGCCACAAGTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528325.5
ENST00000530533.5
ENST00000533387.5
ENST00000534433.5
CDS CCA 90 bp AACACCAGAGCGGTGGGTCTCAAAGTGTGGTTCTCAGACAAGCTGTaGCAGCCTCACTTGAAGACTTGTTGCAGATACAAATTCCCAGGC +
Preference number: 5 (lower is better)
Translates to: NTRAVGLKVWFSDKL*QPHLKTCCRYKFPG
Trigger: GCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTTTGAGACCCACCGCTCTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS-3UTR CAA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGACCCGCCCACATCTGTTaGTATGTAGACCCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: GLSWFDGESSLVTLLALGPAHIC*YVDPSE
Trigger: TTCGGAGGGGTCTACATACAAACAGATGTGGGCGGG...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CAA 90 bp AGTAGGAAGCAAACTTCTCCATGGTACAGAGCGGTGGGCAAAATTTGTGCCTCTCCCGCCCACATCTGTTaGTATGTAGACCCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: SRKQTSPWYRAVGKICASPAHIC*YVDPSE
Trigger: TTCGGAGGGGTCTACATACAAACAGATGTGGGCGGG...AGAGGCACAAATTTTGCCCACCGCTCTGTACCATGGAGAAGTTTGCTTCCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CAA 90 bp TCTAGAATCAGGAAGAGCATCAGTGAAAGTCCCCAGGCCCCTAGAGGAGGGATCAGCGGTGGGCAAAATTaGTGCCTCTGTTCCTCATTT +
Preference number: 5 (lower is better)
Translates to: SRIRKSISESPQAPRGGISGGQN*CLCSSF
Trigger: AAATGAGGAACAGAGGCACAAATTTTGCCCACCGCT...GATCCCTCCTCTAGGGGCCTGGGGACTTTCACTGATGCTCTTCCTGATTCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CAA 90 bp GGCCTTGGAGCCATTGAGGATGTAATGATCTCCCTGTTTCTTAGCGGAGGTCAGGAGCAGGAAGCAATATaGATCCTCCCTCCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: GLGAIEDVMISLFLSGGQEQEAI*ILPPFS
Trigger: ACTGAACGGAGGGAGGATCAATATTGCTTCCTGCTC...CTGACCTCCGCTAAGAAACAGGGAGATCATTACATCCTCAATGGCTCCAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAAACTGCTTCCGGACATaGAGGTGGTCTCGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LHSEVCYPEKPSASVAVANCFRT*RWSRVR
Trigger: CCTCACCCGAGACCACCTCAATGTCCGGAAGCAGTT...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp AATCATCCAGGCACACATGTTGTGGATGCTTATATAGGCTGTGGTGCTGGTGCATCTGTAGCAAAGAGCTaGGCCATGGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: NHPGTHVVDAYIGCGAGASVAKS*AMEHKA
Trigger: GGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGA...TGCACCAGCACCACAGCCTATATAAGCATCCACAACATGTGTGCCTGGATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS-3UTR CAA 90 bp GGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTGGGAGTTAAGCTTCAAAGTCTCTaGCTTTTTCTGGTTACTGGC +
Preference number: 5 (lower is better)
Translates to: GHRDSTVFEDHSSCWLGVKLQSL*LFLVTG
Trigger: GCCAGTAACCAGAAAAAGCAAGAGACTTTGAAGCTT...AACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524426.5
CDS CCA 90 bp TCAACACTGACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTaGGTTCTACTCCTGAAGCAGGCTTCTAGAGATCAGTATCCTCAT +
Preference number: 5 (lower is better)
Translates to: STLTAVALNTRPEQV*VLLLKQASRDQYPH
Trigger: ATGAGGATACTGATCTCTAGAAGCCTGCTTCAGGAGTAGAACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGTCAGTGTTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281182.9
ENST00000374752.6
ENST00000531338.5
ENST00000533387.5
CDS-3UTR CAA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGCCCACTCTGCCATATTaGGAGCCATCTCTCGGGCAG +
Preference number: 5 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVPTLPY*EPSLGQ
Trigger: CTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGG...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000281182.9
CDS-3UTR CAA 90 bp ATGGCAAAGCATTCATCTGTAGCAAAGAGCTTGGCCATGGAGCACAAGGCCACTGAGCAGGAAGCAATATaGATCCTCCCTCCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: MAKHSSVAKSLAMEHKATEQEAI*ILPPFS
Trigger: ACTGAACGGAGGGAGGATCAATATTGCTTCCTGCTC...AGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524426.5
ENST00000526026.5
CDS-3UTR CAA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTCTGTAGCAAAGAGCTaGGCCATGGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFSVAKS*AMEHKA
Trigger: GGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGA...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAAGAGGAGCTCAGCCCTaGGGTCTAATCCATGATTCC +
Preference number: 5 (lower is better)
Translates to: GLSWFDGESSLVTLLALGRGAQP*GLIHDS
Trigger: GGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCT...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp CTGAGACTTGTGGCCAACACCAGGTCTTCTCTAAGCGTCTCTTCCTaGAGCAACAAAGTGCACCAACGTAAGCAGCTTTTTCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: LRLVANTRSSLSVSS*SNKVHQRKQLFLLL
Trigger: AAGAAGGAGAAAAAGCTGCTTACGTTGGTGCACTTTGTTGCTCCAGGAAGAGACGCTTAGAGAAGACCTGGTGTTGGCCACAAGTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524739.1
CDS CCA 90 bp CATCTGTTGTTAGAACGTCTAAGCACAAGAAAAACGCCTACCTTCTaGTCCCACTCTGCCATATTTGGAGCCATCTCTCGGGCAGCAAAG +
Preference number: 5 (lower is better)
Translates to: HLLLERLSTRKTPTF*SHSAIFGAISRAAK
Trigger: CTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGTAGGCGTTTTTCTTGTGCTTAGACGTTCTAACAACAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525961.1
CDS CCA 90 bp TCAATCATCCAGGCACACATGCTTCTGGTCCCACTCTGCCATATTTaGAGCCATCTCTCGGGCAGCAAAGTCAAAGGCCACTTTTTGAAA +
Preference number: 5 (lower is better)
Translates to: SIIQAHMLLVPLCHI*SHLSGSKVKGHFLK
Trigger: TTTCAAAAAGTGGCCTTTGACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGCATGTGTGCCTGGATGATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524426.5
ENST00000527082.5
ENST00000530533.5
CDS CCA 90 bp AGAATAACCTCTGGCAATTTTTACCTTCTAGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCTGAACAGCGTAATCCTTCAGGTAGC +
Preference number: 5 (lower is better)
Translates to: RITSGNFYLLESGGP*SPARTAEQRNPSGS
Trigger: GCTACCTGAAGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGGTAAAAATTGCCAGAGGTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp TCACTGGTCACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: SLVTLLALGKQGSMCSSDRSQLV*AGSSTP
Trigger: TGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCT...ATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGTGACCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp TCACTGGTCACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATTCGCTCCCAATTCTGTaGGCCACAGGGACAGCACAG +
Preference number: 5 (lower is better)
Translates to: SLVTLLALGKQGSMCSSDSLPIL*ATGTAQ
Trigger: CTGTGCTGTCCCTGTGGCCAACAGAATTGGGAGCGA...ATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGTGACCAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTGGCATTAGGAATCTGCAAGGCCTGGTaGCAGATGGCAAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: GLSWFDGESSLVTLLALGICKAW*QMAKHS
Trigger: TGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGAT...TCCTAATGCCAGAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCAGAGGAGCTCAGCCCTaGGGTCTAATCCATGATTCC +
Preference number: 5 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFRGAQP*GLIHDS
Trigger: GGAATCATGGATTAGACCCAAGGGCTGAGCTCCTCT...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp TTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGGCAGAGCAGGAAGCAATATaGATCCTCCCTCCGTTCAGT +
Preference number: 5 (lower is better)
Translates to: LHSEVCYPEKPSASVAVAEQEAI*ILPPFS
Trigger: ACTGAACGGAGGGAGGATCAATATTGCTTCCTGCTC...TGCCACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp GATCAGGAAGGATCCTGTAGGAAAATACAGAAACCCGAGGAGCTGTaGGAAAGAGGTACACTTAGGGGTCATTTCATTACCTGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: DQEGSCRKIQKPEEL*ERGTLRGHFITCLL
Trigger: GAGAAGGCAGGTAATGAAATGACCCCTAAGTGTACCTCTTTCTCACAGCTCCTCGGGTTTCTGTATTTTCCTACAGGATCCTTCCTGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS CCA 90 bp AGCAAGTATGCAAACCTGTTTTCTGAAATAGAGCAGGAGTTGGGCTaGCAGGTGGCAGAGTCTCATAACCTGAATTGTTTCCTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: SKYANLFSEIEQELG*QVAESHNLNCFLSN
Trigger: GTTGGACAGGAAACAATTCAGGTTATGAGACTCTGCCACCTGCCAGCCCAACTCCTGCTCTATTTCAGAAAACAGGTTTGCATACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527082.5
ENST00000528325.5
ENST00000530533.5
ENST00000533387.5
ENST00000534240.5
ENST00000534433.5
CDS CCA 90 bp AGAACCACAAACAGCCAAGCTCAAAGAGGGCCTCCACATTCTGTATaGTTAGAGACAAGGGAAGTTCACCTACTAAACTTGTCAGTTCCC +
Preference number: 5 (lower is better)
Translates to: RTTNSQAQRGPPHSV*LETREVHLLNLSVP
Trigger: GGGAACTGACAAGTTTAGTAGGTGAACTTCCCTTGTCTCTAACCATACAGAATGTGGAGGCCCTCTTTGAGCTTGGCTGTTTGTGGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS-3UTR CAA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCATCAGCCAGTGTGAATaGCAAGTACTGGTTACTGGC +
Preference number: 5 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFISQCE*QVLVTG
Trigger: GCCAGTAACCAGTACTTGCAATTCACACTGGCTGAT...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTAGCTGTGATCTGCAAGGCCTGGTaGCAGATGGCAAAGCATTCA +
Preference number: 5 (lower is better)
Translates to: DLHSEVCYPEKPSASVAVICKAW*QMAKHS
Trigger: TGAATGCTTTGCCATCTGCAACCAGGCCTTGCAGAT...CACAGCTACAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCTCTCAGCCCTTGATATaGAGGCAGTCCAGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFSQPLI*RQSRSR
Trigger: TCTACTTCTGGACTGCCTCAATATCAAGGGCTGAGA...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS-3UTR CAA 90 bp GATCCAAGAAAGGACTTTCATGGTTTGACGGTGAATCTTCACTGGTCACCCTTCCAAAAGTCTCAGCCCTaGATATTGAGGCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: DPRKDFHGLTVNLHWSPFQKSQP*ILRQSR
Trigger: TCTGGACTGCCTCAATATCAAGGGCTGAGACTTTTG...GAAGGGTGACCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTTTCTTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS TCA 90 bp TGGAAGGAAAACGACTCTCGGGAATTCAGTTTGAACACTGGCGACTaGGCCCATAAACATCTTTCTGGAATGAGGTTTGCAGAAGAAAGC +
Preference number: 5 (lower is better)
Translates to: WKENDSREFSLNTGD*AHKHLSGMRFAEES
Trigger: GCTTTCTTCTGCAAACCTCATTCCAGAAAGATGTTTATGGGCTCAGTCGCCAGTGTTCAAACTGAATTCCCGAGAGTCGTTTTCCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524502.2
CDS-3UTR CAA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATTCTGTAGCAAAGAGCTaGGCCATGGAGCACAAGGCC +
Preference number: 5 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHSVAKS*AMEHKA
Trigger: GGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGA...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp GGAAGGGGAGAGTCACAATTGGGAAGACTCTTTAAAGGCAAACGGTaGATTAAAACATATTCCTGGAATAAGGACTACCCAGAGATAACC +
Preference number: 5 (lower is better)
Translates to: GRGESQLGRLFKGKR*IKTYSWNKDYPEIT
Trigger: GGTTATCTCTGGGTAGTCCTTATTCCAGGAATATGTTTTAATCCACCGTTTGCCTTTAAAGAGTCTTCCCAATTGTGACTCTCCCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527665.5
CDS CCA 90 bp TTGGGAAGACTCTTTAAAGGCAAACGGTGGATTAAAACATATTCCTaGAATAAGGACTACCCAGAGATAACCAGGCTGAGGTACTTCTCA +
Preference number: 5 (lower is better)
Translates to: LGRLFKGKRWIKTYS*NKDYPEITRLRYFS
Trigger: TGAGAAGTACCTCAGCCTGGTTATCTCTGGGTAGTCCTTATTCCAGGAATATGTTTTAATCCACCGTTTGCCTTTAAAGAGTCTTCCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527665.5
CDS-3UTR CAA 90 bp TTTATCATGATTTACATTCAGAGGTGTGCTATCCAGAGAAACCTTCTGCATCTGTCTCAGCCCTTGATATaGAGGCAGTCCAGAAGTAGA +
Preference number: 5 (lower is better)
Translates to: FIMIYIQRCAIQRNLLHLSQPLI*RQSRSR
Trigger: TCTACTTCTGGACTGCCTCAATATCAAGGGCTGAGA...CAGATGCAGAAGGTTTCTCTGGATAGCACACCTCTGAATGTAAATCATGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp ATTACCAATTACGGTTACATGATCACAAGTCTCCTGTTCATGCCCTaGCCATGGCGGCTCTTAATCCTAGAAGTATCTTACTTTTCAAAT +
Preference number: 5 (lower is better)
Translates to: ITNYGYMITSLLFMP*PWRLLILEVSYFSN
Trigger: ATTTGAAAAGTAAGATACTTCTAGGATTAAGAGCCGCCATGGCCAGGGCATGAACAGGAGACTTGTGATCATGTAACCGTAATTGGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS-3UTR CAA 90 bp ACCCTTCTGGCATTAGGAAAACAAGGTAGTATGTGTTCTTCTGATGTTTCTCATAAGGACTTTCATGGTTaGACGGTGAATCTTCACTGG +
Preference number: 5 (lower is better)
Translates to: TLLALGKQGSMCSSDVSHKDFHG*TVNLHW
Trigger: CCAGTGAAGATTCACCGTCAAACCATGAAAGTCCTT...ATGAGAAACATCAGAAGAACACATACTACCTTGTTTTCCTAATGCCAGAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000374752.6
CDS CCA 90 bp AATTACGGTTACATGATCACAAGTCTCCTGTTCATGCCCTGGCCATaGCGGCTCTTAATCCTAGAAGTATCTTACTTTTCAAATTACTTA +
Preference number: 5 (lower is better)
Translates to: NYGYMITSLLFMPWP*RLLILEVSYFSNYL
Trigger: TAAGTAATTTGAAAAGTAAGATACTTCTAGGATTAAGAGCCGCCATGGCCAGGGCATGAACAGGAGACTTGTGATCATGTAACCGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS GCA 90 bp AACTATCTACAATCTCCCAGTTCCTCTCTGGCTCTGAAAATAGACTaGCTTTACATCATTTCCTTGCTCTCTTTTGTTGATAGGATAAAC +
Preference number: 5 (lower is better)
Translates to: NYLQSPSSSLALKID*LYIISLLSFVDRIN
Trigger: GTTTATCCTATCAACAAAAGAGAGCAAGGAAATGATGTAAAGGCAGTCTATTTTCAGAGCCAGAGAGGAACTGGGAGATTGTAGATAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS TCA 90 bp GGCAGTCCAAGAGAGTATAAAAAGGATAGACAAAAGTCAACGAAATaGTCTGGAATCAGATTAGGAGAGATACAAACAGTGAGAATAAAG +
Preference number: 5 (lower is better)
Translates to: GSPREYKKDRQKSTK*SGIRLGEIQTVRIK
Trigger: CTTTATTCTCACTGTTTGTATCTCTCCTAATCTGATTCCAGATCATTTCGTTGACTTTTGTCTATCCTTTTTATACTCTCTTGGACTGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527082.5
CDS CCA 90 bp AATCATCCACTACCGGTATTCTCACTTGCAGTAAGAGTTGGTAAGTaGAGGAGACATTTAACAATTACATTATCAGGAGACAAAGATAAA +
Preference number: 5 (lower is better)
Translates to: NHPLPVFSLAVRVGK*RRHLTITLSGDKDK
Trigger: TTTATCTTTGTCTCCTGATAATGTAATTGTTAAATGTCTCCTCCACTTACCAACTCTTACTGCAAGTGAGAATACCGGTAGTGGATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525961.1
CDS CCA 72 bp CCCATGGAAGGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: PMEGSMQEVKLR*PVWTRTRRPPG
Trigger: GCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCTTCCATGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000281182.9
ENST00000524426.5
ENST00000525961.1
ENST00000527082.5
ENST00000530533.5
ENST00000534433.5
CDS CCA 72 bp CTCCCACTTCGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: LPLRSMQEVKLR*PVWTRTRRPPG
Trigger: GCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAAGTGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374752.6
ENST00000524547.5
CDS CCA 72 bp GGAACAGCTCGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GTARSMQEVKLR*PVWTRTRRPPG
Trigger: GCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCGAGCTGTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526026.5
CDS CCA 72 bp GGCACACATGGGTCGATGCAGGAGGTCAAGCTCCGGTaGCCGGTCTGGACGAGGACCCGGAGACCGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GTHGSMQEVKLR*PVWTRTRRPPG
Trigger: GCCCGGCGGTCTCCGGGTCCTCGTCCAGACCGGCCACCGGAGCTTGACCTCCTGCATCGACCCATGTGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533387.5
ENST00000534240.5
CDS TCA 72 bp CCCACACTAGACCCTCTGGAGCAGAAGCTCTGGGGTTaGGGCCCGCAATCTGCGCTCCCATGCCCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: PTLDPLEQKLWG*GPQSALPCPPG
Trigger: GCCTGGAGGGCATGGGAGCGCAGATTGCGGGCCTCAACCCCAGAGCTTCTGCTCCAGAGGGTCTAGTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CAA 72 bp GCCCACACTAGACCCTCTGGAGCAGAAGCTCTGGGGTaGAGGCCCGCAATCTGCGCTCCCATGCCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: AHTRPSGAEALG*RPAICAPMPSR
Trigger: CCTGGAGGGCATGGGAGCGCAGATTGCGGGCCTCAACCCCAGAGCTTCTGCTCCAGAGGGTCTAGTGTGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 72 bp GCGACTCAAAGCCCTCTGCCCCTCTCCCTTATTACCTaGCAGGCAGAAGCTGCCCACAGCCACCCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: ATQSPLPLSLIT*QAEAAHSHPGW
Trigger: CCAGCCAGGGTGGCTGTGGGCAGCTTCTGCCTGGCAGGTAATAAGGGAGAGGGGCAGAGGGCTTTGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CAA 90 bp AATTCCCAGGCCCACACTAGACCCTCTGGAGCAGAAGCTCTGGGGTaGAGGCCCGCAATCTGCGCTCCCATGCCCTCCAGGCGATTCCAG +
Preference number: 6 (lower is better)
Translates to: NSQAHTRPSGAEALG*RPAICAPMPSRRFQ
Trigger: CTGGAATCGCCTGGAGGGCATGGGAGCGCAGATTGCGGGCCTCAACCCCAGAGCTTCTGCTCCAGAGGGTCTAGTGTGGGCCTGGGAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 72 bp TCCACCCCACCTGGCAAAAATCAGGGACTGCGTGGTTaGCCAACAATCCAGCAGGTAGGGCGGCCTTCCCTG +
Preference number: 6 (lower is better)
Translates to: STPPGKNQGLRG*PTIQQVGRPSL
Trigger: CAGGGAAGGCCGCCCTACCTGCTGGATTGTTGGGCAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS GCA 72 bp GGTAGCCGTAGCCCCCGTGCATCTGCAAGGCCTGGTTaGAGATCTGCAGGGAGACAGGGACTAGACGTCTTG +
Preference number: 6 (lower is better)
Translates to: GSRSPRASARPG*RSAGRQGLDVL
Trigger: CAAGACGTCTAGTCCCTGTCTCCCTGCAGATCTGCAACCAGGCCTTGCAGATGCACGGGGGCTACGGCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CCA 72 bp GTGTCATTTCAAGACTTCCGCACTGGCTGTAGAGAGTaGAGACAGCCAGGCTCCGAGCCCGACCCCAACGGC +
Preference number: 6 (lower is better)
Translates to: VSFQDFRTGCRE*RQPGSEPDPNG
Trigger: GCCGTTGGGGTCGGGCTCGGAGCCTGGCTGTCTCCACTCTCTACAGCCAGTGCGGAAGTCTTGAAATGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp GAGTTCCACCCCACCTGGCAAAAATCAGGGACTGCGTaGTTGCCCAACAATCCAGCAGGTAGGGCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: EFHPTWQKSGTA*LPNNPAGRAAF
Trigger: GAAGGCCGCCCTACCTGCTGGATTGTTGGGCAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CAA 72 bp TTCCACCCCACCTGGCAAAAATCAGGGACTGCGTGGTaGCCCAACAATCCAGCAGGTAGGGCGGCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: FHPTWQKSGTAW*PNNPAGRAAFP
Trigger: AGGGAAGGCCGCCCTACCTGCTGGATTGTTGGGCAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CAA 90 bp GCAAGGCCTGGTTGCAGATCTGCAGGGAGACAGGGACTAGACGTCTaGGACTCTGGGAAGACTGTGGAGCAAGCAGCTTCCCTTCCTACC +
Preference number: 6 (lower is better)
Translates to: ARPGCRSAGRQGLDV*DSGKTVEQAASLPT
Trigger: GGTAGGAAGGGAAGCTGCTTGCTCCACAGTCTTCCCAGAGTCCAAGACGTCTAGTCCCTGTCTCCCTGCAGATCTGCAACCAGGCCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS TCA 72 bp CCCCAGCCCACGATCTGGCAGCCCGCCATAAACCCATaGAAGAACCACAAACAGCCAAGCTCAAAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: PQPTIWQPAINP*KNHKQPSSKRA
Trigger: GGCCCTCTTTGAGCTTGGCTGTTTGTGGTTCTTTCATGGGTTTATGGCGGGCTGCCAGATCGTGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CAA 90 bp TGTTGGCCACAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCACCTGGCAAAAATCAGGGACTGCGT +
Preference number: 6 (lower is better)
Translates to: CWPQGQHSLRRSQLV*AGSSTPPGKNQGLR
Trigger: ACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTGTGGCCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS TCA 72 bp TGGTCCTCCTGTTCGGCACATGACCACATAGATGTCTaGCTCACCAGCACCACTGATGAAGGCCTGTGGGGG +
Preference number: 6 (lower is better)
Translates to: WSSCSAHDHIDV*LTSTTDEGLWG
Trigger: CCCCCACAGGCCTTCATCAGTGGTGCTGGTGAGTCAGACATCTATGTGGTCATGTGCCGAACAGGAGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524739.1
ENST00000527082.5
CDS TCA 72 bp GGAGGTCAGAAGAGAGGCAGCATCACTCCCACTTCCTaGGGAGGGATCAAAAGGCAGCAGAGAGAAGGTGAG +
Preference number: 6 (lower is better)
Translates to: GGQKRGSITPTS*GGIKRQQREGE
Trigger: CTCACCTTCTCTCTGCTGCCTTTTGATCCCTCCTCAGGAAGTGGGAGTGATGCTGCCTCTCTTCTGACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527713.1
CDS GCA 72 bp CACATCCACTGGGAACAGCTCCTTCTGGTCCCACTCTaGCATATTTGGAGCCATCTCTCGGGCAGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: HIHWEQLLLVPL*HIWSHLSGSKV
Trigger: GACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGAGCTGTTCCCAGTGGATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281182.9
ENST00000531338.5
ENST00000534433.5
CDS GCA 72 bp AGGATGTCAGGAGGAAGCTGGGAACAATCTCCAAAGTaGTCTGGGAGGACGCACGCTAGTACCTTGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RMSGGSWEQSPK*SGRTHASTLEP
Trigger: TGGCTCCAAGGTACTAGCGTGCGTCCTCCCAGAGCACTTTGGAGATTGTTCCCAGCTTCCTCCTGACATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527082.5
CDS CCA 72 bp ATCACAGCTCGTGTTGGCTGGGAGTTCCACCCCACCTaGCAAAAATCAGGGACTGCGTGGTTGCCCAACAAT +
Preference number: 6 (lower is better)
Translates to: ITARVGWEFHPT*QKSGTAWLPNN
Trigger: ATTGTTGGGCAACCACGCAGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 72 bp AGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTTaGCTGGGAGTTCCACCCCACCTGGCAAAAATCAGG +
Preference number: 6 (lower is better)
Translates to: RDSTVFEDHSSC*LGVPPHLAKIR
Trigger: CCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 72 bp ATCTGCAGGGAGACAGGGACTAGACGTCTTGGACTCTaGGAAGACTGTGGAGCAAGCAGCTTCCCTTCCTAC +
Preference number: 6 (lower is better)
Translates to: ICRETGTRRLGL*EDCGASSFPSY
Trigger: GTAGGAAGGGAAGCTGCTTGCTCCACAGTCTTCCCAGAGTCCAAGACGTCTAGTCCCTGTCTCCCTGCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CAA 72 bp CAGGGACAGCACAGTCTTCGAAGATCACAGCTCGTGTaGGCTGGGAGTTCCACCCCACCTGGCAAAAATCAG +
Preference number: 6 (lower is better)
Translates to: QGQHSLRRSQLV*AGSSTPPGKNQ
Trigger: CTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 72 bp GCCCACAGCCACCCTGGCTGGGATGATAAAAAGCTATaGTTCCCCCTAGTGGCAATGCAGCCTGACAATGTA +
Preference number: 6 (lower is better)
Translates to: AHSHPGWDDKKL*FPLVAMQPDNV
Trigger: TACATTGTCAGGCTGCATTGCCACTAGGGGGAACCATAGCTTTTTATCATCCCAGCCAGGGTGGCTGTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp ACAGCACAGTCTTCGAAGATCACAGCTCGTGTTGGCTaGGAGTTCCACCCCACCTGGCAAAAATCAGGGACT +
Preference number: 6 (lower is better)
Translates to: TAQSSKITARVG*EFHPTWQKSGT
Trigger: AGTCCCTGATTTTTGCCAGGTGGGGTGGAACTCCCAGCCAACACGAGCTGTGATCTTCGAAGACTGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533387.5
CDS CCA 72 bp ACTGCAGTCGCACTGAACACCAGGCCAGAACAAGTGTaGGTTCTACTCCTGAAGCAGGCTTCTAGAGATCAG +
Preference number: 6 (lower is better)
Translates to: TAVALNTRPEQV*VLLLKQASRDQ
Trigger: CTGATCTCTAGAAGCCTGCTTCAGGAGTAGAACCCACACTTGTTCTGGCCTGGTGTTCAGTGCGACTGCAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281182.9
ENST00000374752.6
ENST00000531338.5
ENST00000533387.5
CDS CCA 72 bp AAAAGGACCAGGGAATGCTTGAGTTCTCACAGCGTCTaGGAACACCACTGGGTCCTCCTGACAATAAGGTCC +
Preference number: 6 (lower is better)
Translates to: KRTRECLSSHSV*EHHWVLLTIRS
Trigger: GGACCTTATTGTCAGGAGGACCCAGTGGTGTTCCCAGACGCTGTGAGAACTCAAGCATTCCCTGGTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524739.1
ENST00000527082.5
CDS CAA 72 bp TTTCTCGCGGCAAAGCATTCATCTGTAGCAAAGAGCTaGGCCATGGAGCACAAGGCCACTGCATCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: FLAAKHSSVAKS*AMEHKATASFL
Trigger: GAGGAAGGATGCAGTGGCCTTGTGCTCCATGGCCAAGCTCTTTGCTACAGATGAATGCTTTGCCGCGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CAA 90 bp AGTGTGGTTCTCAGACAAGCTGTGGCAGCCTCACTTGAAGACTTGTaGCAGATACAAATTCCCAGGCCCACACTAGACCCTCTGGAGCAG +
Preference number: 6 (lower is better)
Translates to: SVVLRQAVAASLEDL*QIQIPRPTLDPLEQ
Trigger: CTGCTCCAGAGGGTCTAGTGTGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CAA 90 bp TCACATCCACTGGGAACAGCTCCTTCTGGTCCCACTCTGCCATATTaGGAGCCATCTCTCGGGCAGCAAAGTCAAAGGCCACTTTTTGAA +
Preference number: 6 (lower is better)
Translates to: SHPLGTAPSGPTLPY*EPSLGQQSQRPLFE
Trigger: TTCAAAAAGTGGCCTTTGACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGAGCTGTTCCCAGTGGATGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281182.9
ENST00000534433.5
CDS CAA 90 bp CAAAGTGTGGTTCTCAGACAAGCTGTGGCAGCCTCACTTGAAGACTaGTTGCAGATACAAATTCCCAGGCCCACACTAGACCCTCTGGAG +
Preference number: 6 (lower is better)
Translates to: QSVVLRQAVAASLED*LQIQIPRPTLDPLE
Trigger: CTCCAGAGGGTCTAGTGTGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 72 bp AAGCACAAGAAAAACGCCTACCTTCTGGTCCCACTCTaGCATATTTGGAGCCATCTCTCGGGCAGCAAAGTC +
Preference number: 6 (lower is better)
Translates to: KHKKNAYLLVPL*HIWSHLSGSKV
Trigger: GACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGGTAGGCGTTTTTCTTGTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525961.1
CDS CCA 72 bp TCACTTCATTGCTACCTTCTAGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCTGAACAGCGTAATCCT +
Preference number: 6 (lower is better)
Translates to: SLHCYLLESGGP*SPARTAEQRNP
Trigger: AGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGGTAGCAATGAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281182.9
ENST00000374752.6
ENST00000533387.5
CDS CAA 72 bp CTCAGACAAGCTGTGGCAGCCTCACTTGAAGACTTGTaGCAGATACAAATTCCCAGGCCCACACTAGACCCT +
Preference number: 6 (lower is better)
Translates to: LRQAVAASLEDL*QIQIPRPTLDP
Trigger: AGGGTCTAGTGTGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS TCA 72 bp AAGTGTGGTTCTCAGACAAGCTGTGGCAGCCTCACTTaGAGACTTGTTGCAGATACAAATTCCCAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: KCGSQTSCGSLT*RLVADTNSQAH
Trigger: GTGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 72 bp TCACGTTGCTTCACCGAAGTCACTCAAAGAAGCCTCTaGCCCTCCTGCTTTTCCAAGAGTCGTGTCATTTCA +
Preference number: 6 (lower is better)
Translates to: SRCFTEVTQRSL*PSCFSKSRVIS
Trigger: TGAAATGACACGACTCTTGGAAAAGCAGGAGGGGCAGAGGCTTCTTTGAGTGACTTCGGTGAAGCAACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS GCA 72 bp CCATTATATAATGTTTCCAGCAAGGCAGCCTCACGTTaGTTCACCGAAGTCACTCAAAGAAGCCTCTGCCCC +
Preference number: 6 (lower is better)
Translates to: PLYNVSSKAASR*FTEVTQRSLCP
Trigger: GGGGCAGAGGCTTCTTTGAGTGACTTCGGTGAAGCAACGTGAGGCTGCCTTGCTGGAAACATTATATAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp GCGGTGGGTCTCAAAGTGTGGTTCTCAGACAAGCTGTaGCAGCCTCACTTGAAGACTTGTTGCAGATACAAA +
Preference number: 6 (lower is better)
Translates to: AVGLKVWFSDKL*QPHLKTCCRYK
Trigger: TTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTTTGAGACCCACCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp TCTGGCAATTTTTACCTTCTAGAATCTGGTGGACCCTaGAGTCCCGCACGTACTGCTGAACAGCGTAATCCT +
Preference number: 6 (lower is better)
Translates to: SGNFYLLESGGP*SPARTAEQRNP
Trigger: AGGATTACGCTGTTCAGCAGTACGTGCGGGACTCCAGGGTCCACCAGATTCTAGAAGGTAAAAATTGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS CAA 90 bp ATCAATCATCCAGGCACACATGCTTCTGGTCCCACTCTGCCATATTaGGAGCCATCTCTCGGGCAGCAAAGTCAAAGGCCACTTTTTGAA +
Preference number: 6 (lower is better)
Translates to: INHPGTHASGPTLPY*EPSLGQQSQRPLFE
Trigger: TTCAAAAAGTGGCCTTTGACTTTGCTGCCCGAGAGATGGCTCCAAATATGGCAGAGTGGGACCAGAAGCATGTGTGCCTGGATGATTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000524426.5
ENST00000527082.5
ENST00000530533.5
CDS TCA 72 bp ATGGGTCTTGAGCCCTTATTACCAATTACGGTTACATaGTCACAAGTCTCCTGTTCATGCCCTGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: MGLEPLLPITVT*SQVSCSCPGHG
Trigger: GCCATGGCCAGGGCATGAACAGGAGACTTGTGATCATGTAACCGTAATTGGTAATAAGGGCTCAAGACCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS CAA 72 bp AAAGTGTGGTTCTCAGACAAGCTGTGGCAGCCTCACTaGAAGACTTGTTGCAGATACAAATTCCCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: KVWFSDKLWQPH*KTCCRYKFPGP
Trigger: TGGGCCTGGGAATTTGTATCTGCAACAAGTCTTCAAGTGAGGCTGCCACAGCTTGTCTGAGAACCACACTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp TACGGTTACATGATCACAAGTCTCCTGTTCATGCCCTaGCCATGGCGGCTCTTAATCCTAGAAGTATCTTAC +
Preference number: 6 (lower is better)
Translates to: YGYMITSLLFMP*PWRLLILEVSY
Trigger: GTAAGATACTTCTAGGATTAAGAGCCGCCATGGCCAGGGCATGAACAGGAGACTTGTGATCATGTAACCGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS TCA 72 bp AACGACTCTCGGGAATTCAGTTTGAACACTGGCGACTaGGCCCATAAACATCTTTCTGGAATGAGGTTTGCA +
Preference number: 6 (lower is better)
Translates to: NDSREFSLNTGD*AHKHLSGMRFA
Trigger: TGCAAACCTCATTCCAGAAAGATGTTTATGGGCTCAGTCGCCAGTGTTCAAACTGAATTCCCGAGAGTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524502.2
CDS CCA 72 bp AACAGCCAAGCTCAAAGAGGGCCTCCACATTCTGTATaGTTAGAGACAAGGGAAGTTCACCTACTAAACTTG +
Preference number: 6 (lower is better)
Translates to: NSQAQRGPPHSV*LETREVHLLNL
Trigger: CAAGTTTAGTAGGTGAACTTCCCTTGTCTCTAACCATACAGAATGTGGAGGCCCTCTTTGAGCTTGGCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531338.5
CDS TCA 72 bp AGTAATGGAAGGAAAACGACTCTCGGGAATTCAGTTTaGACACTGGCGACTGAGCCCATAAACATCTTTCTG +
Preference number: 6 (lower is better)
Translates to: SNGRKTTLGNSV*TLATEPINIFL
Trigger: CAGAAAGATGTTTATGGGCTCAGTCGCCAGTGTTCAAACTGAATTCCCGAGAGTCGTTTTCCTTCCATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524502.2
CDS CCA 72 bp TACATGATCACAAGTCTCCTGTTCATGCCCTGGCCATaGCGGCTCTTAATCCTAGAAGTATCTTACTTTTCA +
Preference number: 6 (lower is better)
Translates to: YMITSLLFMPWP*RLLILEVSYFS
Trigger: TGAAAAGTAAGATACTTCTAGGATTAAGAGCCGCCATGGCCAGGGCATGAACAGGAGACTTGTGATCATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524739.1
ENST00000530533.5
ENST00000533387.5
CDS TCA 72 bp CCCAACGGCTTCCATGTTTCCTCGATAGAATGTCTGTaGCTACCAAGAAGATACCCATATAGTGATGGTTTA +
Preference number: 6 (lower is better)
Translates to: PNGFHVSSIECL*LPRRYPYSDGL
Trigger: TAAACCATCACTATATGGGTATCTTCTTGGTAGTCACAGACATTCTATCGAGGAAACATGGAAGCCGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000524502.2
ENST00000531338.5
CDS CCA 72 bp CTCTTTAAAGGCAAACGGTGGATTAAAACATATTCCTaGAATAAGGACTACCCAGAGATAACCAGGCTGAGG +
Preference number: 6 (lower is better)
Translates to: LFKGKRWIKTYS*NKDYPEITRLR
Trigger: CCTCAGCCTGGTTATCTCTGGGTAGTCCTTATTCCAGGAATATGTTTTAATCCACCGTTTGCCTTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527665.5
CDS CCA 72 bp CTACCGGTATTCTCACTTGCAGTAAGAGTTGGTAAGTaGAGGAGACATTTAACAATTACATTATCAGGAGAC +
Preference number: 6 (lower is better)
Translates to: LPVFSLAVRVGK*RRHLTITLSGD
Trigger: GTCTCCTGATAATGTAATTGTTAAATGTCTCCTCCACTTACCAACTCTTACTGCAAGTGAGAATACCGGTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525961.1
CDS TCA 72 bp GATTTATCCAACAGTAAAGTCCATGATGAAACAAAGTaGTACAGTGATGAGTGCCCCAATTCTTCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: DLSNSKVHDETK*YSDECPNSSVS
Trigger: ACTTACAGAAGAATTGGGGCACTCATCACTGTATCACTTTGTTTCATCATGGACTTTACTGTTGGATAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524502.2
CDS CAA 72 bp TCAAATTACTTACAGTACCTAAGTGTCCTTCTTGGGTaGCTGAAATACCCACAATCATCTCCAATGAGTTTT +
Preference number: 6 (lower is better)
Translates to: SNYLQYLSVLLG*LKYPQSSPMSF
Trigger: AAAACTCATTGGAGATGATTGTGGGTATTTCAGCAACCCAAGAAGGACACTTAGGTACTGTAAGTAATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524739.1
ENST00000528325.5
ENST00000530533.5
ENST00000533387.5