RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACACB (Homo sapiens)

Ensembl gene IDs: ENSG00000076555

Ensembl transcript IDs: ENST00000338432.11, ENST00000377848.7, ENST00000377854.9, ENST00000396233.4, ENST00000534852.1, ENST00000536440.2, ENST00000537279.1, ENST00000537347.1, ENST00000538526.5, ENST00000539864.1, ENST00000542524.1, ENST00000543080.1, ENST00000544651.1, ENST00000544726.2, ENST00000546328.1

Found 1222 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTaGCTGGGCGGGCCACGGTCAGGTGGAGGCCGGGCTGTCCATGGT +
Preference number: 1 (lower is better)
Translates to: TGGGSGWFLLPWSRE*LGGPRSGGGRAVHG
Trigger: ACCATGGACAGCCCGGCCTCCACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 90 bp GTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTaGGCGGGCCACGGTCAGGTGGAGGCCGGGCTGTCCATGGTAGAC +
Preference number: 1 (lower is better)
Translates to: VVGLGGSFCRGPGSG*AGHGQVEAGLSMVD
Trigger: GTCTACCATGGACAGCCCGGCCTCCACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR TCA 90 bp GGCCACGGTCAGGTGGAGGCCGGGCTGTCCATGGTAGACAGCAGGTaGACGACCTGCGCCCGCTCAGCTGGGCTGATGTGCTGGCTCAGG +
Preference number: 1 (lower is better)
Translates to: GHGQVEAGLSMVDSR*TTCARSAGLMCWLR
Trigger: CCTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCATGGACAGCCCGGCCTCCACCTGACCGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 90 bp AAAGCAAGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCC +
Preference number: 1 (lower is better)
Translates to: KASLQGLLRVYGWWV*VVPFAVVPGVAGRA
Trigger: GGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACTTGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR CCA 90 bp CGTGGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTaGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCCAATCCTGCA +
Preference number: 1 (lower is better)
Translates to: RGCGKGFLSASVLPT*ARGGCMRRLGANPA
Trigger: TGCAGGATTGGCCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp GTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGTGGTAGATaGGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGT +
Preference number: 1 (lower is better)
Translates to: VCHGSRRTAPPPGGR*GAAGPREPLAGPPG
Trigger: ACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCCCATCTACCACCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 90 bp GCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTGCTGGGTGCATTaGAACGTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAG +
Preference number: 1 (lower is better)
Translates to: APGCAACRARSCWVH*NVLPEQIGMVTTVQ
Trigger: CTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp GATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTGCTaGGTGCATTGCAACGTTCTCCCTGAGCAAATCGGCATGGTCACC +
Preference number: 1 (lower is better)
Translates to: DHRAPGCAACRARSC*VHCNVLPEQIGMVT
Trigger: GGTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR GCA 90 bp AATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTCTaGCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGC +
Preference number: 1 (lower is better)
Translates to: NRHGHHSPVLSHRQL*PSGSDPTIGAHQAS
Trigger: GCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR GCA 90 bp GTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTaGGGTCTTCCACTCCAGGATGTCAGATATGACGCCCTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: VLQEEAAQTPIQEGA*GLPLQDVRYDALLQ
Trigger: CTGGAGAAGGGCGTCATATCTGACATCCTGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 90 bp TACGTGATGTTCTCACGGATGGTGGAGCGCGGGCCATCCCCTGCCTaGCAGTGCTGTTCCAGCCACTGCACAACCACCTGGTTGTTGTCC +
Preference number: 1 (lower is better)
Translates to: YVMFSRMVERGPSPA*QCCSSHCTTTWLLS
Trigger: GGACAACAACCAGGTGGTTGTGCAGTGGCTGGAACAGCACTGGCAGGCAGGGGATGGCCCGCGCTCCACCATCCGTGAGAACATCACGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 90 bp GCTGTCCATGGTAGACAGCAGGTGAACGACCTGCGCCCGCTCAGCTaGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCAC +
Preference number: 1 (lower is better)
Translates to: AVHGRQQVNDLRPLS*ADVLAQVYHTVHGH
Trigger: GTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCATGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 90 bp GGAGCTGCTGGGTGCATTGCAACGTTCTCCCTGAGCAAATCGGCATaGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTC +
Preference number: 1 (lower is better)
Translates to: GAAGCIATFSLSKSA*SPQSSPQSPTALPL
Trigger: GAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp TGTTTAAAAGCAAGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGG +
Preference number: 1 (lower is better)
Translates to: CLKASLQGLLRVYGW*VWVVPFAVVPGVAG
Trigger: CCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACTTGCTTTTAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR GCA 90 bp GGGTTTTCTTCAACCAGGCCTCGGATGGTCTTGAGGACAGAGTCGTaGTTCAGGTACGTGATGTTCTCACGGATGGTGGAGCGCGGGCCA +
Preference number: 1 (lower is better)
Translates to: GFSSTRPRMVLRTES*FRYVMFSRMVERGP
Trigger: TGGCCCGCGCTCCACCATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGGCCTGGTTGAAGAAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTaGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACC +
Preference number: 1 (lower is better)
Translates to: TFSILGQTTHQSSGL*PAPSIPDSAPMEET
Trigger: GGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp AGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTaGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGA +
Preference number: 1 (lower is better)
Translates to: RHYIQHPWTNHPSEQ*VVASSLHPRLRPNG
Trigger: TCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR TCA 90 bp TGGGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTaGAACCTCCAGCTGGGTACTTCCATTCATTTTGCTTTCCCTCTC +
Preference number: 1 (lower is better)
Translates to: WAEDLELCESILQKP*NLQLGTSIHFAFPL
Trigger: GAGAGGGAAAGCAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR TCA 90 bp CCAGCTTTTGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTaGCCAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAG +
Preference number: 1 (lower is better)
Translates to: PAFGGFPGQPHGLPH*PGITFSILGQTTHQ
Trigger: CTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR GCA 90 bp TCCACTCTGCACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTGGGAATTCTCCACCTGGATCACTCG +
Preference number: 1 (lower is better)
Translates to: STLHRPLFGHLVEST*SCEDDVGILHLDHS
Trigger: CGAGTGATCCAGGTGGAGAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTGCAGAGTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CCA 90 bp ACCCTCAAGCATCCCAGCTTTTGGAGGCTTCCCTGGGCAACCTCATaGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACA +
Preference number: 1 (lower is better)
Translates to: TLKHPSFWRLPWATS*ASTLTRHYIQHPWT
Trigger: TGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp TTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTaGGAATTCTCCACCTGGATCACTCGCTGGCCCAGCCTCACCAAG +
Preference number: 1 (lower is better)
Translates to: FLVTLLRALAPVRMM*EFSTWITRWPSLTK
Trigger: CTTGGTGAGGCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CCA 90 bp TCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTaGGTACTTCCATTCATTTTGCTTTCCCTCTCTCAAAAAGAGAAT +
Preference number: 1 (lower is better)
Translates to: SSYARASSRSPETSS*VLPFILLSLSQKEN
Trigger: ATTCTCTTTTTGAGAGAGGGAAAGCAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 90 bp GTACTTCCATTCATTTTGCTTTCCCTCTCTCAAAAAGAGAATCCCTaGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGT +
Preference number: 1 (lower is better)
Translates to: VLPFILLSLSQKENP*QPVLNMAYQWDPPS
Trigger: ACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCAGGGATTCTCTTTTTGAGAGAGGGAAAGCAAAATGAATGGAAGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp TGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGCGTGCTTCAGGTACGTaGTGTTCTCACGGATGGTGG +
Preference number: 2 (lower is better)
Translates to: WVVPFAVVPGVAGRATVRRASGT*CSHGWW
Trigger: CCACCATCCGTGAGAACATCACGTACCTGAAGCACG...CCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGGTGCATGCGCAGGCTaGGGGCCAATCCTGCAGGGG +
Preference number: 2 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRGACAG*GPILQG
Trigger: CCCCTGCAGGATTGGCCCCCAGCCTGCGCATGCACC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGGTGGTGGGTCTGGGTaGTTCCTTTTGCCGTGGTCC +
Preference number: 2 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGGGGSG*FLLPWS
Trigger: GGACCACGGCAAAAGGAACCACCCAGACCCACCACC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: SRRRRRRRQYRKVRAVFHLRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...GTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGAGGCTGTTTTTGTTTaGAAGAGGCACTCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGEAVFV*KRHSWA
Trigger: GGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGCCAATACAGGAAGGTaGGTGCGGTCTTCCACTCCA +
Preference number: 2 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGANTGR*VRSSTP
Trigger: TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGGGCCATCCCCTGCCTaGCAGTGCTGTTCCAGCCAC +
Preference number: 2 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAGPSPA*QCCSSH
Trigger: GTGGCTGGAACAGCACTGGCAGGCAGGGGATGGCCC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGTCTTCAGGGTCTGCTaGGGGTGTACGGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAVFRVC*GCTGGG
Trigger: CCCACCACCCGTACACCCTCAGCAGACCCTGAAGAC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR GCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCAGCTCCCCGCTGGCCTaGAGGATCTCCTGCTTGACC +
Preference number: 2 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLSSPLA*RISCLT
Trigger: GGTCAAGCAGGAGATCCTGCAGGCCAGCGGGGAGCT...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGAGGCTGTTTTTGTTTaGAAGAGGCACTCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGEAVFV*KRHSWA
Trigger: GGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCATCTGTGCTCCCCACTTaGGCAAGAGGAGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPSVLPT*ARGGCM
Trigger: CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGA...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGTCTTCAGGGTCTGCTaGGGGTGTACGGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDVFRVC*GCTGGG
Trigger: CCCACCACCCGTACACCCTCAGCAGACCCTGAAGAC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGCACTCCAGCCTGCATaGCACAGTGAGACTTTGTCT +
Preference number: 2 (lower is better)
Translates to: KKPEDHRAPGCAACRARSALQPA*HSETLS
Trigger: AGACAAAGTCTCACTGTGTCATGCAGGCTGGAGTGC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACGGAACCAGCAGCCCTaGAGAAGTGCCCAGGATTTT +
Preference number: 2 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPRNQQP*RSAQDF
Trigger: AAAATCCTGGGCACTTCTGCAGGGCTGCTGGTTCCG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 90 bp AGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCTaGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCTTCTTG +
Preference number: 2 (lower is better)
Translates to: RSSRAFSRPSRSFRS*SERSGSPSCSMSFL
Trigger: CAAGAAGCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGAGGACCTCGAGCTATaGGAGAGCATCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: WTNHPSEQWVVASSLHPREDLEL*ESILQK
Trigger: CTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCAACCAGGCCTCGGATGTGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: YITQSTATSGFSSTRPRMWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...CATCCGAGGCCTGGTTGAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 2 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCATACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 2 (lower is better)
Translates to: GRGPRAMREHPPEALKPPYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 2 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAAGATGGAGGTTGCAGTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: GCGKGFLSASVLPTWARGRWRLQ*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCACTGCAACCTCCATCT...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGTGAGATCATGCCACTaGACTCCAGCCTGCATGACA +
Preference number: 2 (lower is better)
Translates to: GCGKGFLSASVLPTWARGVRSCH*TPACMT
Trigger: TGTCATGCAGGCTGGAGTGCAGTGGCATGATCTCAC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGACAGGAGATGGAGGTTaGAGTGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQTGDGG*SEIMPL
Trigger: CAGTGGCATGATCTCACTGCAACCTCCATCTCCTGT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGAGGACCTCGAGCTATaGGAGAGCATCCTCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSEDLEL*ESILQK
Trigger: CTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSRVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGATCCTAAAGAACGCCTaGATCCCACATGCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: KGFLSASVLPTWARGGCMILKNA*IPHARH
Trigger: GTGCCTGGCATGTGGGATCCAGGCGTTCTTTAGGAT...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATCCTCCAGAAGCCCTaGAACCTCCAGCTGGGTACT +
Preference number: 2 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDILQKP*NLQLGT
Trigger: AGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: ARASSRSPETSSWVLPFILRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 2 (lower is better)
Translates to: MREHPPEALKPPAGYFHSLRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 90 bp ATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTaGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: ITFSILGQTTHQSSG*WPAPSIPDSAPMEE
Trigger: TTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGATGGAGGTTGCAGTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDRWRLQ*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCACTGCAACCTCCATCT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCCTGAAACCTCCAGCTaGGTACTTCCATTCATTTTG +
Preference number: 2 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEPETSS*VLPFIL
Trigger: CAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 90 bp TGGAGAGGAGGCTGTTTTTGTTTGGAAGAGGCACTCCTGGGCCTTTaGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: WRGGCFCLEEALLGL*LRRVSARNQQPCRS
Trigger: ACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTCCTCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATCCTCCAGAAGCCCTaGAACCTCCAGCTGGGTACT +
Preference number: 2 (lower is better)
Translates to: CLEEALLGLLLRRVSARNILQKP*NLQLGT
Trigger: AGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGAT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGCAGCCCTGCAGAAGTaGCCAGGATTTTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAAALQK*PGFSLF
Trigger: AAACAAAGAAAATCCTGGGCACTTCTGCAGGGCTGC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR GCA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGCGGAACCAGCAGCCCTaGAGAAGTGCCCAGGATTTT +
Preference number: 2 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMRNQQP*RSAQDF
Trigger: AAAATCCTGGGCACTTCTGCAGGGCTGCTGGTTCCG...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAACATGGCCTATCAGTaGGACCCTCCTAGTGATTCA +
Preference number: 2 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSNMAYQ*DPPSDS
Trigger: TGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATTGGGAATTCTCCACCTaGATCACTCGCTGGCCCAGC +
Preference number: 2 (lower is better)
Translates to: HRPLFGHLVESTCSCEDDWEFST*ITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCA...ATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CAA 90 bp AACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTaGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCT +
Preference number: 2 (lower is better)
Translates to: NLMGFHIDQALHSAS*DKPPIRAVGCGQLP
Trigger: AGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 90 bp CCCAGCTTTTGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATaGACCAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCA +
Preference number: 2 (lower is better)
Translates to: PSFWRLPWATSWAST*TRHYIQHPWTNHPS
Trigger: TGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSERVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATCCTAAAGAACGCCTaGATCCCACATGCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: CLEEALLGLLLRRVSARNILKNA*IPHARH
Trigger: GTGCCTGGCATGTGGGATCCAGGCGTTCTTTAGGAT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAATGCTTACTTACATCTaGTGCTGGTCTCAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPMLTYI*CWSQSK
Trigger: TTTACTCTGAGACCAGCACCAGATGTAAGTAAGCAT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGCTGGGCTGATGTGCTaGCTCAGGTATATCACACAG +
Preference number: 2 (lower is better)
Translates to: CLEEALLGLLLRRVSARNAGLMC*LRYITQ
Trigger: CTGTGTGATATACCTGAGCCAGCACATCAGCCCAGC...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR TCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAATACATTTTTCTGGGTaGCTAGACAGTATCCAAAGA +
Preference number: 2 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPIHFSG*LDSIQR
Trigger: TCTTTGGATACTGTCTAGTCACCCAGAAAAATGTAT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATACTCCCCAGCAATCATaGCTGAGCCCCTCAGATTCT +
Preference number: 2 (lower is better)
Translates to: HRPLFGHLVESTCSCEDDTPQQS*LSPSDS
Trigger: AGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGT...ATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACATGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 2 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVARVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGGTGGTGGGTCTGGGTaGTTCCTTTTGCCGTGGTCC +
Preference number: 2 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTGGGSG*FLLPWS
Trigger: GGACCACGGCAAAAGGAACCACCCAGACCCACCACC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCATGCTTACTTACATCTaGTGCTGGTCTCAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSMLTYI*CWSQSK
Trigger: TTTACTCTGAGACCAGCACCAGATGTAAGTAAGCAT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 90 bp AGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAGCTACTCATAACTaGTCTTTCTCTCCAAAACCAAGAGGGCCTTCCCAACAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: SRLSAHRSRVAATHN*SFSPKPRGPSQQKN
Trigger: GTTTTTCTGTTGGGAAGGCCCTCTTGGTTTTGGAGAGAAAGACAAGTTATGAGTAGCTGCTACCCTGGAACGGTGGGCAGAGAGCCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGATCGATCCTTCTCATaGACTTTATCAGATCTTTCT +
Preference number: 2 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLDRSFS*TLSDLS
Trigger: AGAAAGATCTGATAAAGTCCATGAGAAGGATCGATC...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CAA 90 bp AGATTTTGTCTTTTTCAACTTGGATACCCTCAAGCATCCCAGCTTTaGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAG +
Preference number: 2 (lower is better)
Translates to: RFCLFQLGYPQASQL*EASLGNLMGFHIDQ
Trigger: CTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTTGAGGGTATCCAAGTTGAAAAAGACAAAATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACAAAAAGAGAATCCCTaGCAACCAGTGCTAAACATG +
Preference number: 2 (lower is better)
Translates to: MREHPPEALKPPAGYFHSQKENP*QPVLNM
Trigger: CATGTTTAGCACTGGTTGCCAGGGATTCTCTTTTTG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGCAGCCCTGCAGAAGTaGCCAGGATTTTCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNAALQK*PGFSLF
Trigger: AAACAAAGAAAATCCTGGGCACTTCTGCAGGGCTGC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTAAAGATTTCACGATGTaGTATCCAAGGATCCTAAAG +
Preference number: 2 (lower is better)
Translates to: WRLPWATSWASTLTRHYIKDFTM*YPRILK
Trigger: CTTTAGGATCCTTGGATACCACATCGTGAAATCTTT...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTATCCATACATTTTTCTaGGTGACTAGACAGTATCCA +
Preference number: 2 (lower is better)
Translates to: WRLPWATSWASTLTRHYIIHTFF*VTRQYP
Trigger: TGGATACTGTCTAGTCACCCAGAAAAATGTATGGAT...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CCA 90 bp GAAACTGGCTTCATATTGAGAAAAATCCCCCACCAGAGACCAATGGGAATGTTACCTGTGAGGATGATGTaGGAATTCTCCACCTGGATC +
Preference number: 2 (lower is better)
Translates to: ETGFILRKIPHQRPMGMLPVRMM*EFSTWI
Trigger: GATCCAGGTGGAGAATTCCCACATCATCCTCACAGG...TAACATTCCCATTGGTCTCTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR-3UTR TCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAATACATTTTTCTGGGTaGCTAGACAGTATCCAAAGA +
Preference number: 2 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAIHFSG*LDSIQR
Trigger: TCTTTGGATACTGTCTAGTCACCCAGAAAAATGTAT...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR GCA 90 bp CAGAAGATGAGAGGGAACTATACCAGAATGATAGAAGCTGCAAAATTACTTTTTCCCAAGGATCCACTCTaGACAGGCCCCTTTTTGGTC +
Preference number: 2 (lower is better)
Translates to: QKMRGNYTRMIEAAKLLFPKDPL*TGPFLV
Trigger: GACCAAAAAGGGGCCTGTGCAGAGTGGATCCTTGGG...AAAAAGTAATTTTGCAGCTTCTATCATTCTGGTATAGTTCCCTCTCATCTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR-3UTR TCA 90 bp CAGAAGATGAGAGGGAACTATACCAGAATGATAGAAGCTGCAAAATTACTTTTTAAACTGGCTTCATATTaGGAAAAATCCCCCACCAGA +
Preference number: 2 (lower is better)
Translates to: QKMRGNYTRMIEAAKLLFKLASY*EKSPTR
Trigger: TCTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTT...AAAAAGTAATTTTGCAGCTTCTATCATTCTGGTATAGTTCCCTCTCATCTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CCA 72 bp GGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTaGCTGGGCGGGCCACGGTCAGGTGGAGGCCGGGCT +
Preference number: 3 (lower is better)
Translates to: GSGWFLLPWSRE*LGGPRSGGGRA
Trigger: AGCCCGGCCTCCACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp TGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGT +
Preference number: 3 (lower is better)
Translates to: CTGGGSGWFLLP*SREWLGGPRSG
Trigger: ACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR TCA 72 bp CAGGTGGAGGCCGGGCTGTCCATGGTAGACAGCAGGTaGACGACCTGCGCCCGCTCAGCTGGGCTGATGTGC +
Preference number: 3 (lower is better)
Translates to: QVEAGLSMVDSR*TTCARSAGLMC
Trigger: GCACATCAGCCCAGCTGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCATGGACAGCCCGGCCTCCACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp GGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTaGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCC +
Preference number: 3 (lower is better)
Translates to: GKGFLSASVLPT*ARGGCMRRLGA
Trigger: GGCCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp GGAAGTCGGCGAACTGCACCGCCACCTGGTGGTAGATaGGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGC +
Preference number: 3 (lower is better)
Translates to: GSRRTAPPPGGR*GAAGPREPLAG
Trigger: GCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCCCATCTACCACCAGGTGGCGGTGCAGTTCGCCGACTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 72 bp TTCTCACGGATGGTGGAGCGCGGGCCATCCCCTGCCTaGCAGTGCTGTTCCAGCCACTGCACAACCACCTGG +
Preference number: 3 (lower is better)
Translates to: FSRMVERGPSPA*QCCSSHCTTTW
Trigger: CCAGGTGGTTGTGCAGTGGCTGGAACAGCACTGGCAGGCAGGGGATGGCCCGCGCTCCACCATCCGTGAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp CTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCT +
Preference number: 3 (lower is better)
Translates to: LQGLLRVYGWWV*VVPFAVVPGVA
Trigger: AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR CAA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCTCTGTGCTCCCCACTaGGGCAAGAGGAGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: KKPEDHRAPGCAACRARSLCAPH*GKRRVH
Trigger: ATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACTCTGTGCTCCCCACTaGGGCAAGAGGAGGGTGCAT +
Preference number: 3 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGLCAPH*GKRRVH
Trigger: ATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp CTGGCCTGCAGGATCTCCTGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGAGCACTCCTGGGCCTTTaGTTAAGACGGGTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: LACRISCLTWSSRRRRRRALLGL*LRRVSA
Trigger: AGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC...TCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 72 bp CAGGCTGTGCCGCCTGCAGAGCCAGGAGCTGCTGGGTaGATTGCAACGTTCTCCCTGAGCAAATCGGCATGG +
Preference number: 3 (lower is better)
Translates to: QAVPPAEPGAAG*IATFSLSKSAW
Trigger: CCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGGCTCTGCAGGCGGCACAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR GCA 72 bp ATGGAAGAAACCAGAGGATCACAGGGCCCCAGGCTGTaGCGCCTGCAGAGCCAGGAGCTGCTGGGTGCATTG +
Preference number: 3 (lower is better)
Translates to: MEETRGSQGPRL*RLQSQELLGAL
Trigger: CAATGCACCCAGCAGCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp GCAAGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGA +
Preference number: 3 (lower is better)
Translates to: ASLQGLLRVYGW*VWVVPFAVVPG
Trigger: TCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR GCA 72 bp GAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTaGGGTCTTCCACTCCAGGATGTCAGATATGACGCC +
Preference number: 3 (lower is better)
Translates to: EEAAQTPIQEGA*GLPLQDVRYDA
Trigger: GGCGTCATATCTGACATCCTGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp ATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTaGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATG +
Preference number: 3 (lower is better)
Translates to: ILGQTTHQSSGL*PAPSIPDSAPM
Trigger: CATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACAGTCCTCATTTTCCTaGGAGAGAAGAGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGQSSFS*ERRGGQ
Trigger: CTGCCCACCTCTTCTCTCCAAGGAAAATGAGGACTG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp AAAGCAAGTCTTCAGGGTCTGCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCG +
Preference number: 3 (lower is better)
Translates to: KASLQGLLRVYG*WVWVVPFAVVP
Trigger: CGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR CCA 72 bp ATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTaGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGC +
Preference number: 3 (lower is better)
Translates to: IQHPWTNHPSEQ*VVASSLHPRLR
Trigger: GCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp GGTAGACAGCAGGTGAACGACCTGCGCCCGCTCAGCTaGGCTGATGTGCTGGCTCAGGTATATCACACAGTC +
Preference number: 3 (lower is better)
Translates to: GRQQVNDLRPLS*ADVLAQVYHTV
Trigger: GACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGAGAGGAGGCTGTTTTaGTTTGGAAGAGGCACTCCT +
Preference number: 3 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGERRLF*FGRGTP
Trigger: AGGAGTGCCTCTTCCAAACAAAAACAGCCTCCTCTC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGCACTCCTGGGCCTTTaGTTAAGACGGGTGTCAGCT +
Preference number: 3 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAALLGL*LRRVSA
Trigger: AGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
3UTR-3UTR CAA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGGAGGCTGTTTTTGTTaGGAAGAGGCACTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSGGCFC*EEALLG
Trigger: GCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTCC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp GATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCTGCAGGATCTCCTGCTaGACCTGGTCCTCCAGGAGG +
Preference number: 3 (lower is better)
Translates to: DVLAQVYHTVHGHLGVFFCRISC*TWSSRR
Trigger: CCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCA...GAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR TCA 72 bp AGCCAGGAGCTGCTGGGTGCATTGCAACGTTCTCCCTaGGCAAATCGGCATGGTCACCACAGTCCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: SQELLGALQRSP*ANRHGHHSPVL
Trigger: GAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp GGGTGCATTGCAACGTTCTCCCTGAGCAAATCGGCATaGTCACCACAGTCCAGTCCTCAGTCACCGACAGCT +
Preference number: 3 (lower is better)
Translates to: GCIATFSLSKSA*SPQSSPQSPTA
Trigger: AGCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAATGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTATCAGGATGGGCTGTTaGTATTGTCTAAGGCCGTCC +
Preference number: 3 (lower is better)
Translates to: WADVLAQVYHTVHGHLGVIRMGC*YCLRPS
Trigger: GGACGGCCTTAGACAATACAAACAGCCCATCCTGAT...AACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 72 bp TCAACCAGGCCTCGGATGGTCTTGAGGACAGAGTCGTaGTTCAGGTACGTGATGTTCTCACGGATGGTGGAG +
Preference number: 3 (lower is better)
Translates to: STRPRMVLRTES*FRYVMFSRMVE
Trigger: CTCCACCATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGGCCTGGTTGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp ACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTaGGAATTCTCCACCTGGATCACTCGCTGGCCCAGC +
Preference number: 3 (lower is better)
Translates to: TLLRALAPVRMM*EFSTWITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR-3UTR CAA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGAGGTCCTTTCGGTCCTaGTCGGAGAGATCAGGTTCC +
Preference number: 3 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMRSFRS*SERSGS
Trigger: GGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CAA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGTCCTCATTTTCCTaGGAGAGAAGAGGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: WRLPWATSWASTLTRHYIQSSFS*ERRGGQ
Trigger: CTGCCCACCTCTTCTCTCCAAGGAAAATGAGGACTG...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR GCA 72 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTGGGAATTCTCCACCTG +
Preference number: 3 (lower is better)
Translates to: HRPLFGHLVEST*SCEDDVGILHL
Trigger: CAGGTGGAGAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CCA 72 bp AATCCCTGGCAACCAGTGCTAAACATGGCCTATCAGTaGGACCCTCCTAGTGATTCACTAGCGCCATTTGGG +
Preference number: 3 (lower is better)
Translates to: NPWQPVLNMAYQ*DPPSDSLAPFG
Trigger: CCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCAGGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGAGAGGAGGCTGTTTTaGTTTGGAAGAGGCACTCCT +
Preference number: 3 (lower is better)
Translates to: MREHPPEALKPPAGYFHSERRLF*FGRGTP
Trigger: AGGAGTGCCTCTTCCAAACAAAAACAGCCTCCTCTC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACAGGGATGTTTTAGCTaGATTAGATTTAGTGATGCA +
Preference number: 3 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPQGCFS*IRFSDA
Trigger: TGCATCACTAAATCTAATCAAGCTAAAACATCCCTG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp CCTCGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGCCACCCCTGCTCTCTTaGTCTGCATACATTTCTATG +
Preference number: 3 (lower is better)
Translates to: PRMVLRTESCFRYVMFSRPPLLS*SAYISM
Trigger: CATAGAAATGTATGCAGACAAAGAGAGCAGGGGTGG...CCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CAA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTATGCCAGGCACTGTTTaGCAAAAGGAAACAGGGATG +
Preference number: 3 (lower is better)
Translates to: ARASSRSPETSSWVLPFIMPGTV*QKETGM
Trigger: CATCCCTGTTTCCTTTTGCAAAACAGTGCCTGGCAT...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTaGGTACTTCCATTCATTTTGCTTTCCCTCTCTCAA +
Preference number: 3 (lower is better)
Translates to: ARASSRSPETSS*VLPFILLSLSQ
Trigger: TTGAGAGAGGGAAAGCAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CCA 72 bp ATCTTTCTTTCGGAACTTAATCTCCACTGTCCCCTCTaGTTCCAGAACACCACCCCTGCTCTCTTTGTCTGC +
Preference number: 3 (lower is better)
Translates to: IFLSELNLHCPL*FQNTTPALFVC
Trigger: GCAGACAAAGAGAGCAGGGGTGGTGTTCTGGAACCAGAGGGGACAGTGGAGATTAAGTTCCGAAAGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR GCA 72 bp GTATCCAAGGATCCTAAAGAACGCCTGGATCCCACATaGCAGGCACTGTTTTGCAAAAGGAAACAGGGATGT +
Preference number: 3 (lower is better)
Translates to: VSKDPKERLDPT*QALFCKRKQGC
Trigger: ACATCCCTGTTTCCTTTTGCAAAACAGTGCCTGGCATGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGGATGTTTTAGCTaGATTAGATTTAGTGATGCA +
Preference number: 3 (lower is better)
Translates to: CLEEALLGLLLRRVSARNQGCFS*IRFSDA
Trigger: TGCATCACTAAATCTAATCAAGCTAAAACATCCCTG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGTACTTCCATTCATTTaGCTTTCCCTCTCTCAAAAA +
Preference number: 3 (lower is better)
Translates to: CLEEALLGLLLRRVSARNVLPFI*LSLSQK
Trigger: TTTTTGAGAGAGGGAAAGCAAAATGAATGGAAGTAC...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp CTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTCCCCTCTATGCACAGCGGGTaGATGGTGGCATCTATGACC +
Preference number: 3 (lower is better)
Translates to: LLMDFIRSFFRNLISTVPSMHSG*MVASMT
Trigger: GGTCATAGATGCCACCATCAACCCGCTGTGCATAGA...GGGGACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR-3UTR CAA 90 bp ACCCCTGCTCTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCTGCCCAGGATTTTCTTaGTTTAAAAGCAAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: TPALFVCIHFYAQRVDGGCPGFS*FKSKSS
Trigger: TGAAGACTTGCTTTTAAACAAAGAAAATCCTGGGCA...GCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAGAGCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538526.5
3UTR CCA 72 bp TTCATTTTGCTTTCCCTCTCTCAAAAAGAGAATCCCTaGCAACCAGTGCTAAACATGGCCTATCAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: FILLSLSQKENP*QPVLNMAYQWD
Trigger: GTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCAGGGATTCTCTTTTTGAGAGAGGGAAAGCAAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR-3UTR CAA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATGCCCAGGATTTTCTTaGTTTAAAAGCAAGTCTTCA +
Preference number: 3 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLCPGFS*FKSKSS
Trigger: TGAAGACTTGCTTTTAAACAAAGAAAATCCTGGGCA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR TCA 72 bp GCTCTTGTATCAGTAGGAATGAAACTGGCTTCATATTaGGAAAAATCCCCCACCAGAGACCAATGGGAATGT +
Preference number: 3 (lower is better)
Translates to: ALVSVGMKLASY*EKSPTRDQWEC
Trigger: ACATTCCCATTGGTCTCTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGAGGGGGAGCCAGCTTaGTGGCCCTGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGEGEPA*WPWGLA
Trigger: AGCCAGGCCCCAGGGCCAGCAAGCTGGCTCCCCCTC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGGTCCCGGGAGTGGCTaGGCGGGCCACGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGGPGSG*AGHGQV
Trigger: CACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCACCGTGGTCCCGGGAGTaGCTGGGCGGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPPWSRE*LGGPRS
Trigger: TGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGG...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACAGGGCCCCAGGCTGTaGCGCCTGCAGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGQGPRL*RLQSQE
Trigger: CTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGGCACAGCACCGAGGTaGTGTTGCTGGCATACTGGG +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGGTAPR*CCWHTG
Trigger: CCCAGTATGCCAGCAACATCACCTCGGTGCTGTGCC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGATATCCTTCAGCCGGTaGAGTGGCACGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGISFSR*SGTPMA
Trigger: CGCCATGGGCGTGCCACTGCACCGGCTGAAGGATAT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCCATCTCAGCGTAGCTaGTCCCAGCCTCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGPSQRS*SQPQRG
Trigger: GCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCAGCTCCCCGCTGGCCTaGAGGATCTCCTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSSSPLA*RISCLT
Trigger: GGTCAAGCAGGAGATCCTGCAGGCCAGCGGGGAGCT...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGCCAGCGGGGCGATGGTaGCCGGTGCTTCCTCAACGA +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGPAGRW*PVLPQR
Trigger: TCGTTGAGGAAGCACCGGCCACCATCGCCCCGCTGG...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCATAGCCCACGGTCTTaGCCAGGCGGATGGCACACT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGHSPRS*PGGWHT
Trigger: AGTGTGCCATCCGCCTGGCCAAGACCGTGGGCTATG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGGCAGTGGCACGCCCATaGCGATCTGTAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGAVARP*RSVAGR
Trigger: CCGCCCAGCTACAGATCGCCATGGGCGTGCCACTGC...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGGATCTGCCGGGCTCTaGGGGCCACTTTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGGSAGL*GPLCSA
Trigger: AGCACTGCAAAGTGGCCCTCAGAGCCCGGCAGATCC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGGGAGGACGGCAGCATaGACTGGAATTCTACCACGC +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGGRTAA*TGILPR
Trigger: GCGTGGTAGAATTCCAGTTCATGCTGCCGTCCTCCC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
66% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGAGAAGCCGCTGTCCATaGAGAGCTCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGRSRCP*RALCCA
Trigger: GGCACAGCACAGAGCTCTTCATGGACAGCGGCTTCT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGGCCTCGGATGGTCTTaGGGACAGAGTCGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGGLGWS*GQSRAS
Trigger: TGAAGCACGACTCTGTCCTCAAGACCATCCGAGGCC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGGCCACCACGCAGCCTaGTTCCAGCACGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQGHHAA*FQHGTW
Trigger: CCAGGTGCCGTGCTGGAAGCAGGCTGCGTGGTGGCC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAGGCCACCACGCAGCCTaGTTCCAGCACGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPGHHAA*FQHGTW
Trigger: CCAGGTGCCGTGCTGGAAGCAGGCTGCGTGGTGGCC...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGGCGGGGATGCGGCCTaGCACGCTGGTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSGGDAA*HAGHDL
Trigger: GAGATCATGACCAGCGTGGCAGGCCGCATCCCCGCC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCCGGGCCATCTCGGATaGCCGCAGGTACAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGPGHLG*PQVQKV
Trigger: GACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCACAGGGCCCCCAAGCTaGCCCGGCTGCCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSTGPPS*PGCPSG
Trigger: CCCGGAAGGGCAGCCGGGCCAGCTTGGGGGCCCTGT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACCAGCGGGGCGATGGTaGCCGGTGCTTCCTCAACGA +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGPAGRW*PVLPQR
Trigger: TCGTTGAGGAAGCACCGGCCACCATCGCCCCGCTGG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACTGGCGGCAATGACGTaGCCTCGGGCGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGLAAMT*PRARGG
Trigger: CCCTCCCCTCGCCCGAGGCCACGTCATTGCCGCCAG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACCCTCCAGCTCGTCCATaGCCTCCAGGAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: SRRRRRRRQYRKVRAVFHPPARP*PPGAAA
Trigger: AGCGGCTGCTCCTGGAGGCCATGGACGAGCTGGAGG...GTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCACCCAGGGTCTGGGCCTaGAATCGCTTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPPRVWA*NRLAWS
Trigger: GCTCCAGGCCAAGCGATTCCAGGCCCAGACCCTGGG...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGTTTGTGGGGGTCTTCTaGGTCCACCCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGFVGVF*VHPSHV
Trigger: CACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGTTCTCACGGATGGTaGAGCGCGGGCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGCSHGW*SAGHPL
Trigger: CAGGGGATGGCCCGCGCTCCACCATCCGTGAGAACA...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCGGGCCACGGTCAGGTaGAGGCCGGGCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRATVR*RPGCPW
Trigger: CCATGGACAGCCCGGCCTCCACCTGACCGTGGCCCG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGACGGGCCACGGTCAGGTaGAGGCCGGGCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRRATVR*RPGCPW
Trigger: CCATGGACAGCCCGGCCTCCACCTGACCGTGGCCCG...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGGTGCATGCGCAGGCTaGGGGCCAATCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEGACAG*GPILQG
Trigger: CCCCTGCAGGATTGGCCCCCAGCCTGCGCATGCACC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGGGCACAGCACCGAGGTaGTGTTGCTGGCATACTGGG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGGTAPR*CCWHTG
Trigger: CCCAGTATGCCAGCAACATCACCTCGGTGCTGTGCC...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCCCACAAGTAGGCCTTaGCAGCCCCCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAPTSRP*QPPPSP
Trigger: TGGAGACGGAGGGGGCTGTCAAGGCCTACTTGTGGG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGTCTTCAGGGTCTGCTaGGGGTGTACGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSVFRVC*GCTGGG
Trigger: CCCACCACCCGTACACCCTCAGCAGACCCTGAAGAC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGATCCTCCAGAAGCCCTaGAACCTCCAGCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGILQKP*NLQLGT
Trigger: AGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGAT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCCCTCCCCATTTCTCTaGGGTGTCTCCCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGPSPFL*GVSPEL
Trigger: TAACTCAGGGGAGACACCGCAGAGAAATGGGGAGGG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACCACAGGGGCGGGGATaGGGCCTGCCACGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPPQGRG*GLPRWS
Trigger: TGACCAGCGTGGCAGGCCGCATCCCCGCCCCTGTGG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGCTACCATGGCTCCCATaGGCTGGCACAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGLPWLP*AGTVGR
Trigger: TCTCCCCACTGTGCCAGCGCATGGGAGCCATGGTAG...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCTACCATGGCTCCCATaGGCTGGCACAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGLPWLP*AGTVGR
Trigger: TCTCCCCACTGTGCCAGCGCATGGGAGCCATGGTAG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGGATGGGAACGGCACTaGCGGTGGTGGTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEGWERH*RWWSGG
Trigger: TCCGCCAGACCACCACCGGCAGTGCCGTTCCCATCC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTTTGGGAATGCCCTCTaGCCGGGCCATCTCGGATGC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGFGNAL*PGHLGC
Trigger: GCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAA...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGTTTGGGAATGCCCTCTaGCCGGGCCATCTCGGATGC +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGFGNAL*PGHLGC
Trigger: GCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAA...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCAGGGTCTGCAGGGACTaGCACCTCCACAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGRVCRD*HLHSPC
Trigger: ACACGGACTGTGGAGGTGGCAGTCCCTGCAGACCCT...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACCAGGTTGGCAGGGTCTaGAGGGACTGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: SRRRRRRRQYRKVRAVFHQVGRV*RDCHLH
Trigger: GTGGAGGTGGCAGTCCCTGCAGACCCTGCCAACCTG...GTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGCCTGCAGGATCTCCTaGTTGACCTGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGACRIS*LTWSSR
Trigger: CCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGCGGAACCAGCAGCCCTaGAGAAGTGCCCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: WVVPFAVVPGVAGRATVRRNQQP*RSAQDF
Trigger: AAAATCCTGGGCACTTCTGCAGGGCTGCTGGTTCCG...CCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGCCTTTGTGGGAGGCTaGCTCGGCCTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEAFVGG*LGLAGC
Trigger: ACACCCAGCCAGGCCGAGCCAGCCTCCCACAAAGGC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGATCTTTGGGGCCTTTGTaGGAGGCTGGCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGSLGPL*EAGSAW
Trigger: CCAGGCCGAGCCAGCCTCCCACAAAGGCCCCAAAGA...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACACAGGGCCCCCAAGCTaGCCCGGCTGCCCTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDTGPPS*PGCPSG
Trigger: CCCGGAAGGGCAGCCGGGCCAGCTTGGGGGCCCTGT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAGGCCCACCTGCGGATaGAGCGCATGCACTTCACGG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVARPTCG*SACTSR
Trigger: CCGTGAAGTGCATGCGCTCCATCCGCAGGTGGGCCT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGGGACCTGTAGCGTCTaGGCGACAACGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEGTCSV*ATTVEA
Trigger: CGCCTCCACCGTTGTCGCCCAGACGCTACAGGTCCC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGATGGCGATCTGTAGCTaGGCGGCCGGCAGATTAACA +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGMAICS*AAGRLT
Trigger: TGTTAATCTGCCGGCCGCCCAGCTACAGATCGCCAT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGCTGGCTGGGGAACTaGCACAGCACCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGCWLGN*HSTEVM
Trigger: CATCACCTCGGTGCTGTGCCAGTTCCCCAGCCAGCA...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCAGTGGTTCCCAGGGTCTaGGCCTGGAATCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPVVPRV*AWNRLA
Trigger: GGCCAAGCGATTCCAGGCCCAGACCCTGGGAACCAC...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCCTCCACTGTCCCCTCTaGTTCCAGAACACCACCCCT +
Preference number: 4 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSLHCPL*FQNTTP
Trigger: AGGGGTGGTGTTCTGGAACCAGAGGGGACAGTGGAG...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AGCCGGCCCTCCAGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCCTGCGCCCGCTCAGCTaGGCTGATGTGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRPSRSFRSLSERSGSPSLRPLS*ADVLAQ
Trigger: CTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAG...GCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGGTCCCGGGAGTGGCTaGGCGGGCCACGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDGPGSG*AGHGQV
Trigger: CACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTGGCCTGCAGGATCTCCTGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGAGGTGGTGGGTCTGGGTaGTTCCTTTTGCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LACRISCLTWSSRRRRRRGGGSG*FLLPWS
Trigger: GGACCACGGCAAAAGGAACCACCCAGACCCACCACC...TCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGCTGGGCCAGCTTCATaGGAAAGATGGGCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAAGPAS*ERWASL
Trigger: CAGGCTCGCCCATCTTTCTCATGAAGCTGGCCCAGC...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCGGCACCTGGACGCTTaGTGTACTTCACCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQRHLDA*CTSPGL
Trigger: GAGGCCGGGTGAAGTACATCAAGCGTCCAGGTGCCG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCAGGGAGTTCTCCTGTaGACGGTTCAGCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSQGVLL*TVQPGG
Trigger: TCCACCCGGCTGAACCGTTCACAGGAGAACTCCCTG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGGATCTGCCGGGCTCTaGGGGCCACTTTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEGSAGL*GPLCSA
Trigger: AGCACTGCAAAGTGGCCCTCAGAGCCCGGCAGATCC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGGCACGCTGGTGTTATTaGACGCCACCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWARWCY*TPPPAR
Trigger: ACGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGC...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGAGTCATCTGGCACGGTaGTGTGGGAGACACCATTGT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGSHLAR*CGRHHC
Trigger: ACAATGGTGTCTCCCACATCACCGTGCCAGATGACT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGGCGGTTTTGTAGGCTaGGTCTGGGAACCACACCTG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGGGFVG*VWEPHL
Trigger: CAGGTGTGGTTCCCAGACTCAGCCTACAAAACCGCC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGACTGGATATGCACGTaGCTCAGCTCCCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQDWICT*LSSPLA
Trigger: GGCCAGCGGGGAGCTGAGTCACGTGCATATCCAGTC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCCGTGCTTCAGGTACGTaGTGTTCTCACGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSRASGT*CSHGWW
Trigger: CCACCATCCGTGAGAACATCACGTACCTGAAGCACG...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTATGGTAGACAGCAGGTaGACGACCTGCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAMVDSR*TTCARS
Trigger: TGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCAT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCTCTGGGGAGGGTGCTaGGTCACTGGAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVALWGGC*VTGRKG
Trigger: CCCCTTTCTTCCAGTGACGCAGCACCCTCCCCAGAG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGGCGGGGATGCGGCCTaGCACGCTGGTCATGATCTC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRGGDAA*HAGHDL
Trigger: GAGATCATGACCAGCGTGGCAGGCCGCATCCCCGCC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGACTGGGCCATCACCCTaGGGACAGACTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGTGPSP*GQTSPQ
Trigger: CTGTGGAGAAGTCTGTCCGCAGGGTGATGGCCCAGT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCAGCCGCGGATCCCGCTaGGGTATCTCTGGACCAACT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSSRGSR*GISGPT
Trigger: AGTTGGTCCAGAGATACCGCAGCGGGATCCGCGGCT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGATTCTACCACGCAGGTaGCGTCCGGGAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQILPRR*RPGAAG
Trigger: ACCGGCAGCTCCCGGACGGCACCTGCGTGGTAGAAT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCTTGATCAGCATCCCGTaGTGGGGCCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSLISIP*WGPCLL
Trigger: CAACAAGCAAGGGCCCCAGCACGGGATGCTGATCAA...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGAGCTCCCCGCTGGCCTaGAGGATCTCCTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPESSPLA*RISCLT
Trigger: GGTCAAGCAGGAGATCCTGCAGGCCAGCGGGGAGCT...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGCTTCTTGTCTTCTTTaGAGGGGGAGCCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGASCLL*RGSQLA
Trigger: AGCAAGCTGGCTCCCCCTCCAAAGAAGACAAGAAGC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGGGACCTGTAGCGTCTaGGCGACAACGGTGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRGTCSV*ATTVEA
Trigger: CGCCTCCACCGTTGTCGCCCAGACGCTACAGGTCCC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCTTCAGCCGGTGCAGTaGCACGCCCATGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPELQPVQ*HAHGDL
Trigger: CAGATCGCCATGGGCGTGCCACTGCACCGGCTGAAG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCTGGCGGCAATGACGTaGCCTCGGGCGAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDLAAMT*PRARGG
Trigger: CCCTCCCCTCGCCCGAGGCCACGTCATTGCCGCCAG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGCGGAAATTCAGTTCCTaGACAGTCCCGGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGRKFSS*TVPELG
Trigger: GCCGAGCTCCGGGACTGTCCAGGAACTGAATTTCCG...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTGGCTATCTGCTGGCTaGGGAACTGGCACAGCACCG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSWLSAG*GTGTAP
Trigger: CGGTGCTGTGCCAGTTCCCCAGCCAGCAGATAGCCA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTTGCAGGGTGGCTGCATaGCAGTCCAGGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVACRVAA*QSRMVA
Trigger: AGCCACCATCCTGGACTGCCATGCAGCCACCCTGCA...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCGACAGGGAAGGGTCTaGGCCACACAGCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGRQGRV*ATQLID
Trigger: ATCGATGAGCTGTGTGGCCCAGACCCTTCCCTGTCG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCTGCCGGTGGTGGTCTaGCGGATGTTGATCTTGACC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGLPVVV*RMLILT
Trigger: GGTCAAGATCAACATCCGCCAGACCACCACCGGCAG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CTCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGCTGCCGGTGGTGGTCTaGCGGATGTTGATCTTGACC +
Preference number: 4 (lower is better)
Translates to: LQHPAGCVMEVGELHRHLLPVVV*RMLILT
Trigger: GGTCAAGATCAACATCCGCCAGACCACCACCGGCAG...CAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACGGGCCTGGAATCGCTTaGCCTGGAGCAGATCCTTGG +
Preference number: 4 (lower is better)
Translates to: SRRRRRRRQYRKVRAVFHGPGIA*PGADPW
Trigger: CCAAGGATCTGCTCCAGGCCAAGCGATTCCAGGCCC...GTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCCAGGGTCTGGGCCTaGAATCGCTTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPRVWA*NRLAWS
Trigger: GCTCCAGGCCAAGCGATTCCAGGCCCAGACCCTGGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGAGAACCCCCTCCAGTTaGCAAAGATCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGRTPSS*QRSSGA
Trigger: TGCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCCACCTGGTGGTAGATaGGGAGCAGCAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQPPGGR*GAAGPR
Trigger: GCGAGGACCTGCTGCTCCCCATCTACCACCAGGTGG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCATGTTCTCACGGATGGTaGAGCGCGGGCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPCSHGW*SAGHPL
Trigger: CAGGGGATGGCCCGCGCTCCACCATCCGTGAGAACA...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCGGGCCACGGTCAGGTaGAGGCCGGGCTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFRATVR*RPGCPW
Trigger: CCATGGACAGCCCGGCCTCCACCTGACCGTGGCCCG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCGGTCCCGGGAGTGGCTaGGCGGGCCACGGTCAGGTG +
Preference number: 4 (lower is better)
Translates to: DVLAQVYHTVHGHLGVFFGPGSG*AGHGQV
Trigger: CACCTGACCGTGGCCCGCCCAGCCACTCCCGGGACC...GAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVALRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCAGAGCAGTGGGTTGTaGCCAGCTCCCTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQQSSGL*PAPSIP
Trigger: GGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGCACACTGCTCCATaGACTCGAATATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGWHTAP*TRIWPA
Trigger: CGCTGGCCATATTCGAGTTCATGGAGCAGTGTGCCA...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCAGGGAGTTCTCCTGTaGACGGTTCAGCCGGGTGGA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQQGVLL*TVQPGG
Trigger: TCCACCCGGCTGAACCGTTCACAGGAGAACTCCCTG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCTGCCACGCTGGTCATaGTCTCCTGCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPELPRWS*SPAAPA
Trigger: TGCTGGAGCTGCAGGAGATCATGACCAGCGTGGCAG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGAGTCCTCGAATCTCCTaGAGGCTACCATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWSPRIS*RLPWLP
Trigger: TGGGAGCCATGGTAGCCTTCAGGAGATTCGAGGACT...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCGGAGTTCAGGGAGCTaGTTCTGGTGTAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGRSSGS*FWCSLG
Trigger: CCCAAGACTACACCAGAATCAGCTCCCTGAACTCCG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCACCATTGTAATGCATaGTCTGAACGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGHHCNA*SERHPA
Trigger: AGCTGGGTGGCGTTCAGATCATGCATTACAATGGTG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGCACCATTGTAATGCATaGTCTGAACGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WVVPFAVVPGVAGRATVRHHCNA*SERHPA
Trigger: AGCTGGGTGGCGTTCAGATCATGCATTACAATGGTG...CCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGACTGGATATGCACGTaGCTCAGCTCCCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGDWICT*LSSPLA
Trigger: GGCCAGCGGGGAGCTGAGTCACGTGCATATCCAGTC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCCACAAGTAGGCCTTaGCAGCCCCCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPTSRP*QPPPSP
Trigger: TGGAGACGGAGGGGGCTGTCAAGGCCTACTTGTGGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCAGGCCTCGGATGGTCTTaGGGACAGAGTCGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPGLGWS*GQSRAS
Trigger: TGAAGCACGACTCTGTCCTCAAGACCATCCGAGGCC...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCTCTGGGGAGGGTGCTaGGTCACTGGAAGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQLWGGC*VTGRKG
Trigger: CCCCTTTCTTCCAGTGACGCAGCACCCTCCCCAGAG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGTGCGGATGGAGCGCATaGACTTCACGGCGGCAATCC +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPECGWSA*TSRRQS
Trigger: GGATTGCCGCCGTGAAGTGCATGCGCTCCATCCGCA...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGAATCCGCAAACTCGTaGAGGCCTCCAGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEESANS*RPPVAA
Trigger: GGCCGCTACTGGAGGCCTGCACGAGTTTGCGGATTC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACTGGTCATGATCTCCTaGAGCTCCAGCAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGLVMIS*SSSSGS
Trigger: ACTGCCGCTGCTGGAGCTGCAGGAGATCATGACCAG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAAGGATGGTGGCTATCTaGTGGCTGGGGAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGRMVAI*WLGNWH
Trigger: GTGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCT...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGGTGATCAGGTCAGAGTaGCTGATGATGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWVIRSE*LMMARM
Trigger: CATCCGCGCCATCATCAGGCACTCTGACCTGATCAC...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCCTGTCACCACGGTCTaGGCCCAGGGTGCCATGATT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEPVTTV*AQGAMI
Trigger: AATCATGGCACCCTGGGCGCAGACCGTGGTGACAGG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCCAGGAGCTGCTGGGTaGATTGCAACGTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAPGAAG*IATFSL
Trigger: CAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGGGCCCCAGGCTGTaGCGCCTGCAGAGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQQGPRL*RLQSQE
Trigger: CTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGCCTTTGTGGGAGGCTaGCTCGGCCTGGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAAFVGG*LGLAGC
Trigger: ACACCCAGCCAGGCCGAGCCAGCCTCCCACAAAGGC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCCCTCTTCACCAGGTaGAGTCCCGACATGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPLFTR*SPDMLG
Trigger: GCCGAGCATGTCGGGACTCCACCTGGTGAAGAGGGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCTCCTAAGGCCCACATaGCCTCACTGGGAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQLLRPT*PHWEGL
Trigger: TAGGCCCTCCCAGTGAGGCCATGTGGGCCTTAGGAG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGATGCCGCCGCTGGATaGAGCAGTCGCGACCAAACA +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEDAAAG*SSRDQT
Trigger: TGTTTGGTCGCGACTGCTCCATCCAGCGGCGGCATC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCGGAAATTCAGTTCCTaGACAGTCCCGGAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSRKFSS*TVPELG
Trigger: GCCGAGCTCCGGGACTGTCCAGGAACTGAATTTCCG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGTCCGCTGGGAGGACCTaGCCCCTTTCCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMSAGRT*PLSREC
Trigger: ACACTCCCTGGAAAGGGGCCAGGTCCTCCCAGCGGA...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCTGCCGGTGGTGGTCTaGCGGATGTTGATCTTGACC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVALPVVV*RMLILT
Trigger: GGTCAAGATCAACATCCGCCAGACCACCACCGGCAG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGATCAGCATCCCGTGCTaGGGCCCTTGCTTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: CLTWSSRRRRRRRQYRKVISIPC*GPCLLP
Trigger: CGGCAACAAGCAAGGGCCCCAGCACGGGATGCTGAT...CACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGTGGAATCGCTTGGCCTaGAGCAGATCCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGWNRLA*SRSLVT
Trigger: CGTCACCAAGGATCTGCTCCAGGCCAAGCGATTCCA...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCAGTCATAGATGTAGGTaGTTCCCAGGGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSSHRCR*FPGSGP
Trigger: AGGCCCAGACCCTGGGAACCACCTACATCTATGACT...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACTCCACTGTCCCCTCTaGTTCCAGAACACCACCCCT +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGLHCPL*FQNTTP
Trigger: AGGGGTGGTGTTCTGGAACCAGAGGGGACAGTGGAG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGATCTCCTGCTTGACCTaGTCCTCCAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEISCLT*SSRRRR
Trigger: CCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGAT...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCACCAGCGACGCAGCATaGACTGGATATGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGTSDAA*TGYARD
Trigger: GTCACGTGCATATCCAGTCCATGCTGCGTCGCTGGT...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCTGCGCCCGCTCAGCTaGGCTGATGTGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSALRPLS*ADVLAQ
Trigger: CTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTCCGTGGTCCCGGGAGTaGCTGGGCGGGCCACGGTCA +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIPWSRE*LGGPRS
Trigger: TGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGG...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGRVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQLRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGCCGGCCCTCCAGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCCTGAGGGTGTACGGGTaGTGGGTCTGGGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SRPSRSFRSLSERSGSPSLRVYG*WVWVVP
Trigger: AGGAACCACCCAGACCCACCACCCGTACACCCTCAG...GCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGTAGACTCACGAGATaGGCCAGCAACAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAGRLTR*ASNRVL
Trigger: GAGGACTCTGTTGCTGGCTCATCTCGTGAGTCTACC...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGCTGGGCCAGCTTCATaGGAAAGATGGGCGAGCCTG +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMAGPAS*ERWASL
Trigger: CAGGCTCGCCCATCTTTCTCATGAAGCTGGCCCAGC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCTGTCATGCACGTTCTaGACATCGCATCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVALSCTF*TSHRPR
Trigger: ACGTGGCCGATGCGATGTTCAGAACGTGCATGACAG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGCCGGAGGGTCATCATaGGCTTCTGCACCCACTCCT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGAGGSS*ASAPTP
Trigger: AGGAGTGGGTGCAGAAGCTCATGATGACCCTCCGGC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAGTCCTCGAATCTCCTaGAGGCTACCATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVASPRIS*RLPWLP
Trigger: TGGGAGCCATGGTAGCCTTCAGGAGATTCGAGGACT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCTTCTTTGTAGAGGCTaGTGTCCAGGTAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGLLCRG*CPGSSP
Trigger: CGGGCTACTACCTGGACATCAGCCTCTACAAAGAAG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCGGAGTTCAGGGAGCTaGTTCTGGTGTAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSRSSGS*FWCSLG
Trigger: CCCAAGACTACACCAGAATCAGCTCCCTGAACTCCG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGCGGTCTTCCACTCCAGGATGTCAGATATGACGCCCTTCTCCAGCATCCGGCCGTCTTCAGGGTCTGCTaGGGGTGTACGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CGLPLQDVRYDALLQHPAVFRVC*GCTGGG
Trigger: CCCACCACCCGTACACCCTCAGCAGACCCTGAAGAC...GGCCGGATGCTGGAGAAGGGCGTCATATCTGACATCCTGGAGTGGAAGACCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCATCCTCCAGAAGCCCTaGAACCTCCAGCTGGGTACT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSILQKP*NLQLGT
Trigger: AGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGAT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAAAGCTCTGGGGAGGGTaGTGCGTCACTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGKLWGG*CVTGRK
Trigger: CTTTCTTCCAGTGACGCAGCACCCTCCCCAGAGCTT...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGTCTCATAGGCCCACCTaGGGATGGAGCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPESHRPT*GWSACT
Trigger: AGTGCATGCGCTCCATCCGCAGGTGGGCCTATGAGA...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAGCGGCAGTGACGGGTaGCGGAGGGTCATCATGAGC +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSSGSDG*RRVIMS
Trigger: GCTCATGATGACCCTCCGGCACCCGTCACTGCCGCT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCAGCGGCAGTGACGGGTaGCGGAGGGTCATCATGAGC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSASGSDG*RRVIMS
Trigger: GCTCATGATGACCCTCCGGCACCCGTCACTGCCGCT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACTTCTTGGCCACCTGTaGGTGGGAGAAGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGLLGHL*VGEDAV
Trigger: GACTGCATCTTCTCCCACGCACAGGTGGCCAAGAAG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGTGCCGTCCGGGAGCTaGCGGTGCTGCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDVPSGS*RCCRLF
Trigger: AAACAGCCTGCAGCACCGGCAGCTCCCGGACGGCAC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCATTCTACCACGCAGGTaGCGTCCGGGAGCTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSILPRR*RPGAAG
Trigger: ACCGGCAGCTCCCGGACGGCACCTGCGTGGTAGAAT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACCTGTCACCACGGTCTaGGCCCAGGGTGCCATGATT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGPVTTV*AQGAMI
Trigger: AATCATGGCACCCTGGGCGCAGACCGTGGTGACAGG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGGGTCTGCAGGGACTaGCACCTCCACAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRVCRD*HLHSPC
Trigger: ACACGGACTGTGGAGGTGGCAGTCCCTGCAGACCCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGCCAATACAGGAAGGTaGGTGCGGTCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGANTGR*VRSSTP
Trigger: TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCGCCTGCAGGATCTCCTaGTTGACCTGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCACRIS*LTWSSR
Trigger: CCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGC...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCAGCTCCCCGCTGGCCTaGAGGATCTCCTGCTTGACC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSASSPLA*RISCLT
Trigger: GGTCAAGCAGGAGATCCTGCAGGCCAGCGGGGAGCT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGAGGACCTCGAGCTATaGGAGAGCATCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSEDLEL*ESILQK
Trigger: CTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGCTGCTGGGTGCATTaGAACGTTCTCCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGSCWVH*NVLPEQ
Trigger: TTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCCAGGAGCTGCTGGGTaGATTGCAACGTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEPGAAG*IATFSL
Trigger: CAGGGAGAACGTTGCAATGCACCCAGCAGCTCCTGG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCCCAGGCACCCTTTCATaGCACCGGAGAACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLPGTLS*HRRTPS
Trigger: GGAGGGGGTTCTCCGGTGGCATGAAAGGGTGCCTGG...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGCTGGAAAGGGCTCCTaGCTCGGGATGAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQAGKGS*LGMRFA
Trigger: AGCAAACCTCATCCCGAGCCAGGAGCCCTTTCCAGC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCTGGGCGACAACGGTaGAGGCGATCTTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGSGRQR*RRSYLL
Trigger: TAGGAGATAAGATCGCCTCCACCGTTGTCGCCCAGA...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAACGCTGTGGAAGACCTaGTGCAGTTTCTCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGTLWKT*CSFSPR
Trigger: CCTCGGAGAGAAACTGCACCAGGTCTTCCACAGCGT...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAATGGTGGCTATCTGCTaGCTGGGGAACTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPMVAIC*LGNWHS
Trigger: GCTGTGCCAGTTCCCCAGCCAGCAGATAGCCACCAT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCATGGCAGTCCAGGATaGTGGCTATCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEHGSPG*WLSAGW
Trigger: CCAGCCAGCAGATAGCCACCATCCTGGACTGCCATG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATGCAGGGTGGCTGCATaGCAGTCCAGGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGCRVAA*QSRMVA
Trigger: AGCCACCATCCTGGACTGCCATGCAGCCACCCTGCA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCCAGGGTCTGGGCCTaGAATCGCTTGGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPRVWA*NRLAWS
Trigger: GCTCCAGGCCAAGCGATTCCAGGCCCAGACCCTGGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCTGCCACGTAAATTTTaGGAATGCCCTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSLPRKF*ECPLPG
Trigger: CCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCGGCCGGGTGTGTCATaGAAGTCGGCGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSRPGVS*KSANCT
Trigger: GGTGCAGTTCGCCGACTTCCATGACACACCCGGCCG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTACCAGCGACGCAGCATaGACTGGATATGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVATSDAA*TGYARD
Trigger: GTCACGTGCATATCCAGTCCATGCTGCGTCGCTGGT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCTGCGCCCGCTCAGCTaGGCTGATGTGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDLRPLS*ADVLAQ
Trigger: CTGAGCCAGCACATCAGCCCAGCTGAGCGGGCGCAG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGATCCTAAAGAACGCCTaGATCCCACATGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGILKNA*IPHARH
Trigger: GTGCCTGGCATGTGGGATCCAGGCGTTCTTTAGGAT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAGAGCCAGGAGCTGCTaGGTGCATTGCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVARARSC*VHCNVL
Trigger: GAGAACGTTGCAATGCACCCAGCAGCTCCTGGCTCT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAAGCATCCCAGCTTTTaGAGGCTTCCCTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAKHPSF*RLPWAT
Trigger: GGTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAAGTTTAGGGTTTTCTaGAGCATGGCCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAKFRVF*SMAPAS
Trigger: GCTGGCTGGGGCCATGCTTCAGAAAACCCTAAACTT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGCCGGAGGGTCATCATaGGCTTCTGCACCCACTCCT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSAGGSS*ASAPTP
Trigger: AGGAGTGGGTGCAGAAGCTCATGATGACCCTCCGGC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGGGAGGACGGCAGCATaGACTGGAATTCTACCACGC +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMGRTAA*TGILPR
Trigger: GCGTGGTAGAATTCCAGTTCATGCTGCCGTCCTCCC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAGAAGCCGCTGTCCATaGAGAGCTCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRRSRCP*RALCCA
Trigger: GGCACAGCACAGAGCTCTTCATGGACAGCGGCTTCT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGCCGCTGTCCATaGAGAGCTCTGTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRSRCP*RALCCA
Trigger: GGCACAGCACAGAGCTCTTCATGGACAGCGGCTTCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGCACGCTGGTGTTATTaGACGCCACCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRARWCY*TPPPAR
Trigger: ACGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCGTGGAACATGTGTTTaGTCTCCTCTGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: LVLQEEAAQTPIQEGACGRGTCV*SPLPCQ
Trigger: TTGGCATGGCAGAGGAGATCAAACACATGTTCCACG...ACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTTGCAACGTTCTCCCTaGGCAAATCGGCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSLQRSP*ANRHGH
Trigger: GTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCCCTCCCCATTTCTCTaGGGTGTCTCCCCTGAGTTA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQPSPFL*GVSPEL
Trigger: TAACTCAGGGGAGACACCGCAGAGAAATGGGGAGGG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGAAAACCAATTCTTTCTaGTGCCTCCAAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGKTNSF*CLQALI
Trigger: GATGAGGGCTTGGAGGCAGCAGAAAGAATTGGTTTT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCGGCGATGGTGGCCGGTaGTTCCTCAACGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCGDGGR*FLNDLL
Trigger: CAGAAGATCGTTGAGGAAGCACCGGCCACCATCGCC...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCATATCCTTCAGCCGGTaGAGTGGCACGCCCATGGCG +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAISFSR*SGTPMA
Trigger: CGCCATGGGCGTGCCACTGCACCGGCTGAAGGATAT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCCCCAGGAGAAGCAGTaGCCAAATTGGGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEPQEKQ*PNWESA
Trigger: TGCGGATTCCCAATTTGGGCACTGCTTCTCCTGGGG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCAACATGGTCAGAGACTaGCGGGCCACCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSNMVRD*RATLRM
Trigger: CATTCTCAAGGTGGCCCGGCAGTCTCTGACCATGTT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACCATCTCAGCGTAGCTaGTCCCAGCCTCAACGTGGC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPPSQRS*SQPQRG
Trigger: GCCACGTTGAGGCTGGGAGCAGCTACGCTGAGATGG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCGGTCTTCCACTCCAGGATGTCAGATATGACGCCCTTCTCCAGCATCCGGCCCTACCATGGCTCCCATaGGCTGGCACAGTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CGLPLQDVRYDALLQHPALPWLP*AGTVGR
Trigger: TCTCCCCACTGTGCCAGCGCATGGGAGCCATGGTAG...GGCCGGATGCTGGAGAAGGGCGTCATATCTGACATCCTGGAGTGGAAGACCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCATCCTCCAGGTGGTCTaGACACTGGATGGACACATT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGILQVV*TLDGHI
Trigger: AATGTGTCCATCCAGTGTGCAGACCACCTGGAGGAT...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGTGATCAGGTCAGAGTaGCTGATGATGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQVIRSE*LMMARM
Trigger: CATCCGCGCCATCATCAGGCACTCTGACCTGATCAC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGCTCACCCTCGTTCTaGAGGTATTCGAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CLTWSSRRRRRRRQYRKVRSPSF*RYSKEA
Trigger: AGCCTCCTTCGAATACCTGCAGAACGAGGGTGAGCG...CACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCGGGCCATCTCGGATaGCCGCAGGTACAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPGHLG*PQVQKV
Trigger: GACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGGGCGCCACTGTTGGCTaGCACGTAAATTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWGATVG*HVNFGN
Trigger: ATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCC...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTACTCCCCAGCAATCATaGCTGAGCCCCTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVATPQQS*LSPSDS
Trigger: AGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAACTCCCCAGCAATCATaGCTGAGCCCCTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGTPQQS*LSPSDS
Trigger: AGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGT...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTTGGGTGAGGCCTTCCTaGAAGCATCCACCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFWVRPS*KHPPGV
Trigger: GACCCCCGGTGGATGCTTGCAGGAAGGCCTCACCCA...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAGGGTCTGCAGGGACTaGCACCTCCACAGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSRVCRD*HLHSPC
Trigger: ACACGGACTGTGGAGGTGGCAGTCCCTGCAGACCCT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCGGAACCAGCAGCCCTaGAGAAGTGCCCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPERNQQP*RSAQDF
Trigger: AAAATCCTGGGCACTTCTGCAGGGCTGCTGGTTCCG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAGATCCCACCATCGGTaGTCATCAAGCCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRRSHHR*SSSQQA
Trigger: CGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGACTTGGGGGCTTCTGGTaGGAGGGTGGTAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRLGGFW*EGGREF
Trigger: AAACTCCCTACCACCCTCCCACCAGAAGCCCCCAAG...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGAGAAAGGGGGTTTCTTaGGGGCTTCTGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMRKGVS*GLLVGG
Trigger: CCCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCT...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAAGAAAGGGGGTTTCTTaGGGGCTTCTGGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGRKGVS*GLLVGG
Trigger: CCCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCT...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCAGGGTGCTGCGTCACTaGAAGAAAGGGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSRVLRH*KKGGFL
Trigger: CAAGAAACCCCCTTTCTTCCAGTGACGCAGCACCCT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCGTTGGCTTGAAGCTCTaGGGAGGGTGCTGCGTCACT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCVGLKL*GGCCVT
Trigger: AGTGACGCAGCACCCTCCCCAGAGCTTCAAGCCAAC...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTTCTGGGCGACAACGGTaGAGGCGATCTTATCTCCTA +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVASGRQR*RRSYLL
Trigger: TAGGAGATAAGATCGCCTCCACCGTTGTCGCCCAGA...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTCGATGTCGTTGTTCTaGAAGCTCTCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSSMSLF*KLSVSR
Trigger: CCTGGAGACCGAGAGCTTCCAGAACAACGACATCGA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCATCGAGCTCCAGCCTaGCCACCACGCAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFHRAPA*PPRSLL
Trigger: AAGCAGGCTGCGTGGTGGCCAGGCTGGAGCTCGATG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCGCTGCGGTATCTCTaGACCAACTGCACGATGCTC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPLRYL*TNCTML
Trigger: GAGCATCGTGCAGTTGGTCCAGAGATACCGCAGCGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGTGGCAGACAGGAAAATaGACTCCACCTGGTTATGCC +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGWQTGK*TPPGYA
Trigger: GGCATAACCAGGTGGAGTCCATTTTCCTGTCTGCCA...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCGTCATCCGGTTTGGGTaGGAGGACGGCAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCVIRFG*EDGSMN
Trigger: GTTCATGCTGCCGTCCTCCCACCCAAACCGGATGAC...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAATCAGCATCCCGTGCTaGGGCCCTTGCTTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPISIPC*GPCLLP
Trigger: CGGCAACAAGCAAGGGCCCCAGCACGGGATGCTGAT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGTGGAATCGCTTGGCCTaGAGCAGATCCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQWNRLA*SRSLVT
Trigger: CGTCACCAAGGATCTGCTCCAGGCCAAGCGATTCCA...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGTGGTTCCCAGGGTCTaGGCCTGGAATCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDVVPRV*AWNRLA
Trigger: GGCCAAGCGATTCCAGGCCCAGACCCTGGGAACCAC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGTCGATGTGTTTACAGTaGACGGAGTTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGSMCLQ*TEFREL
Trigger: CAGCTCCCTGAACTCCGTCCACTGTAAACACATCGA...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATGGGAATTCTCCACCTaGATCACTCGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGWEFST*ITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCATCTCCTGCTTGACCTaGTCCTCCAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLISCLT*SSRRRR
Trigger: CCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGAT...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGAGGCTGTTTTTGTTTaGAAGAGGCACTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSEAVFV*KRHSWA
Trigger: GGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCCTGAAACCTCCAGCTaGGTACTTCCATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGPETSS*VLPFIL
Trigger: CAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTGGTGCATGCGCAGGCTaGGGGCCAATCCTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIGACAG*GPILQG
Trigger: CCCCTGCAGGATTGGCCCCCAGCCTGCGCATGCACC...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCATTTTGGAGGCTTCCCTaGGCAACCTCATGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPFWRLP*ATSWAS
Trigger: GGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAA...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp CGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCTaGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: RAFSRPSRSFRS*SERSGSPSCSM
Trigger: CATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGCTCCTGGCTCGGGATaGGGTTTGCTTCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQAPGSG*GLLLIY
Trigger: GTAAATCAGAAGCAAACCTCATCCCGAGCCAGGAGC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCTGCGGTGTCTCCCCTaGGTTATCAGAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCLRCLP*VIRGWK
Trigger: TTTCCAGCCTCTGATAACTCAGGGGAGACACCGCAG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGGTAGACTCACGAGATaGGCCAGCAACAGAGTCCTC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRGRLTR*ASNRVL
Trigger: GAGGACTCTGTTGCTGGCTCATCTCGTGAGTCTACC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGCACTTTCTCAGCAATaGGGTAGTCCAACCACCCGG +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRALSQQ*GSPTTR
Trigger: CCGGGTGGTTGGACTACCTCATTGCTGAGAAAGTGC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACCCTTCAGAGTTGGGTaGGGCCTTCCTGCAAGCATC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPPFRVG*GLPASI
Trigger: GATGCTTGCAGGAAGGCCTCACCCAACTCTGAAGGG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCCCTTCAGAGTTGGGTaGGGCCTTCCTGCAAGCATC +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSPFRVG*GLPASI
Trigger: GATGCTTGCAGGAAGGCCTCACCCAACTCTGAAGGG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATGGTAGACAGCAGGTaGACGACCTGCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDMVDSR*TTCARS
Trigger: TGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACTGCCGCTTTTCTCTTaGCATGTCCTCCCCACCGTG +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPLPLFS*HVLPTV
Trigger: CACGGTGGGGAGGACATGGCAAGAGAAAAGCGGCAG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338432.11
CDS-3UTR GCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGAGGGGGAGCCAGCTTaGTGGCCCTGGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLEGEPA*WPWGLA
Trigger: AGCCAGGCCCCAGGGCCAGCAAGCTGGCTCCCCCTC...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGCTCTTGATGTTTGCCTaGTTCTTGTCTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGLLMFA*FLSSLE
Trigger: CTCCAAAGAAGACAAGAAGCAGGCAAACATCAAGAG...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGGATGGCCCGCTCGTTaGGGAACATCTCATAGGCCC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFGWPAR*GTSHRP
Trigger: GGGCCTATGAGATGTTCCGCAACGAGCGGGCCATCC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGGATGGCCCGCTCGTTaGGGAACATCTCATAGGCCC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDGWPAR*GTSHRP
Trigger: GGGCCTATGAGATGTTCCGCAACGAGCGGGCCATCC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGGCGATGGTGGCCGGTaGTTCCTCAACGATCTTCTG +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAGDGGR*FLNDLL
Trigger: CAGAAGATCGTTGAGGAAGCACCGGCCACCATCGCC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCAGGGATGTTCCACCTaGAAGCGAGGATTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMQGCST*KRGFSS
Trigger: GGAGCTGAATCCTCGCTTGCAGGTGGAACATCCCTG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTCCGGGAGCTGCCGGTaGTGCAGGCTGTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSSGSCR*CRLFNS
Trigger: TGAGTTAAACAGCCTGCAGCACCGGCAGCTCCCGGA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCATCCTCCAGGTGGTCTaGACACTGGATGGACACATT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSILQVV*TLDGHI
Trigger: AATGTGTCCATCCAGTGTGCAGACCACCTGGAGGAT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGTGATCAGGTCAGAGTaGCTGATGATGGCGCGGATG +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMVIRSE*LMMARM
Trigger: CATCCGCGCCATCATCAGGCACTCTGACCTGATCAC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCTCACCCTCGTTCTaGAGGTATTCGAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMRSPSF*RYSKEA
Trigger: AGCCTCCTTCGAATACCTGCAGAACGAGGGTGAGCG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGATTGATCAGCATCCCGTaGTGGGGCCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRLISIP*WGPCLL
Trigger: CAACAAGCAAGGGCCCCAGCACGGGATGCTGATCAA...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGLVEST*SCEDDV
Trigger: CACATCATCCTCACAGGAGCAAGTGCTCTCAACAAG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCTGGGTGAGGCCTTCCTaGAAGCATCCACCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: DVLAQVYHTVHGHLGVFFWVRPS*KHPPGV
Trigger: GACCCCCGGTGGATGCTTGCAGGAAGGCCTCACCCA...GAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAATACAGGAAGGTGCGTaGGGTCTTCCACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPIQEGA*GLPLQD
Trigger: ATCCTGGAGTGGAAGACCGCACGCACCTTCCTGTAT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACGGAACCAGCAGCCCTaGAGAAGTGCCCAGGATTTT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGRNQQP*RSAQDF
Trigger: AAAATCCTGGGCACTTCTGCAGGGCTGCTGGTTCCG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACGCCTGGATCCCACATaGCAGGCACTGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPRLDPT*QALFCK
Trigger: TTTGCAAAACAGTGCCTGGCATGTGGGATCCAGGCG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTACAGGAGATGGAGGTTaGAGTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVATGDGG*SEIMPL
Trigger: CAGTGGCATGATCTCACTGCAACCTCCATCTCCTGT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCTGCTGGGTGCATTaGAACGTTCTCCCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQSCWVH*NVLPEQ
Trigger: TTGCTCAGGGAGAACGTTGCAATGCACCCAGCAGCT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCTGGCTCGGCCTGGCTaGGTGTCTTGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQLARPG*VSWAEC
Trigger: ACACTCTGCCCAAGACACCCAGCCAGGCCGAGCCAG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGTGTCCCAGTCCCGTTaGCTTGAAGCTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFVSQSR*LEALGR
Trigger: CCTCCCCAGAGCTTCAAGCCAACGGGACTGGGACAC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGTCACAACAAACCGGATaGCCCGCTCGTTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMSQQTG*PARCGT
Trigger: TGTTCCGCAACGAGCGGGCCATCCGGTTTGTTGTGA...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGTTATTGGGCCCTCCTaGGACGGGGACGTAATGATC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRVIGPS*DGDVMI
Trigger: GATCATTACGTCCCCGTCCCAGGAGGGCCCAATAAC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGTCGATGTCGTTGTTCTaGAAGCTCTCGGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPESMSLF*KLSVSR
Trigger: CCTGGAGACCGAGAGCTTCCAGAACAACGACATCGA...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAAACGGTTCAGCCGGGTaGACTTTAGAAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPNGSAG*TLEGSS
Trigger: CGATGACCCTTCTAAAGTCCACCCGGCTGAACCGTT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCATGGGCAGTGTCTGCTaGGCAGGGAGTTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSMGSVC*AGSSPV
Trigger: CACAGGAGAACTCCCTGCCCAGCAGACACTGCCCAT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTTTTCCAGGACGCTGTaGAAGACCTGGTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSFSRTL*KTWCSF
Trigger: GAAACTGCACCAGGTCTTCCACAGCGTCCTGGAAAA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGGCTAAAAACGGGCTCTaGCAGACAAAAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGAKNGL*QTKATH
Trigger: ATGAGTGGCTTTTGTCTGCCAGAGCCCGTTTTTAGC...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAATGTTGCTGGCATACTaGGCCATCACCCTGCGGACA +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRMLLAY*AITLRT
Trigger: TGTCCGCAGGGTGATGGCCCAGTATGCCAGCAACAT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCATGGCAGTCCAGGATaGTGGCTATCTGCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSHGSPG*WLSAGW
Trigger: CCAGCCAGCAGATAGCCACCATCCTGGACTGCCATG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCGACAGGGAAGGGTCTaGGCCACACAGCTCATCGAT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSRQGRV*ATQLID
Trigger: ATCGATGAGCTGTGTGGCCCAGACCCTTCCCTGTCG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGTCATCCGGTTTGGGTaGGAGGACGGCAGCATGAAC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAVIRFG*EDGSMN
Trigger: GTTCATGCTGCCGTCCTCCCACCCAAACCGGATGAC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGGTGGTCTGCACACTaGATGGACACATTCAGAATG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGRWSAH*MDTFRM
Trigger: CATTCTGAATGTGTCCATCCAGTGTGCAGACCACCT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCGGATGAAGAACCTATaGTCCGTCACTTCCACACCT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVARMKNL*SVTSTP
Trigger: AGGTGTGGAAGTGACGGACCATAGGTTCTTCATCCG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATGGAATCGCTTGGCCTaGAGCAGATCCTTGGTGACG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGWNRLA*SRSLVT
Trigger: CGTCACCAAGGATCTGCTCCAGGCCAAGCGATTCCA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCATGTCAGGATGTCTTTaGGATACTTGTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGMSGCL*DTCLGS
Trigger: GCTCCCCAGACAAGTATCCCAAAGACATCCTGACAT...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACTGCCACGTAAATTTTaGGAATGCCCTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGLPRKF*ECPLPG
Trigger: CCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCATGGGAATTCTCCACCTaGATCACTCGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPWEFST*ITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCA...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCCTGTGAGGATGATGTaGGAATTCTCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSPVRMM*EFSTWI
Trigger: GATCCAGGTGGAGAATTCCCACATCATCCTCACAGG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACACCCAGCTGGTTGTTaGATGTGTAGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGHPAGC*MCRPLF
Trigger: GAAGAGAGGTCTACACATCCAACAACCAGCTGGGTG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACCACCCAGCTGGTTGTTaGATGTGTAGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SRRRRRRRQYRKVRAVFHHPAGC*MCRPLF
Trigger: GAAGAGAGGTCTACACATCCAACAACCAGCTGGGTG...GTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCCCTCAAAGTCATCTaGCACGGTGATGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPLKVI*HGDVGD
Trigger: GTCTCCCACATCACCGTGCCAGATGACTTTGAGGGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGACAGCCACTCCAGGATaGTATAAACCCCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGTATPG*YKPPQS
Trigger: ACTTTGAGGGGGTTTATACCATCCTGGAGTGGCTGT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGGTCGTAGGGAGCTCTaGATGGGAGGAATTCAATTT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGGRREL*MGGIQF
Trigger: AAATTGAATTCCTCCCATCCAGAGCTCCCTACGACC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGTTCCCTTCAGAGTTaGGTGAGGCCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMRSLQS*VRPSCK
Trigger: CTTGCAGGAAGGCCTCACCCAACTCTGAAGGGAACG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGTGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACCGACTCCGCCCCAATaGAAGAAACCAGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGPTPPQ*KKPEDH
Trigger: GTGATCCTCTGGTTTCTTCCATTGGGGCGGAGTCGG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGGATGAGGTTTGCTTCTaGTTTACTCTTGGTGATCGG +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGDEVCF*FTLGDR
Trigger: CCGATCACCAAGAGTAAATCAGAAGCAAACCTCATC...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACAAAAGAGCCCAGGATaGAGTTGGTCATCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGQKSPG*SWSSAA
Trigger: GGCAGCTGATGACCAACTTCATCCTGGGCTCTTTTG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAAATGATCCGCCATCTTaGTGTACTCTGCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPNDPPS*CTLRWP
Trigger: AGGCCAACGCAGAGTACATCAAGATGGCGGATCATT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCACTCTGTACTTGTCTaGAAAGGATCGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSHSVLV*KGSGSP
Trigger: AGGACTTCCCGATCCTTTTCAGACAAGTACAGAGTG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAGTCACTCCCCATGGTaGCTCTCCATACAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSSHSPW*LSIQKP
Trigger: CGGCTTCTGTATGGAGAGTCACCATGGGGAGTGACT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCAGTCACTCCCCATGGTaGCTCTCCATACAGAAGCCG +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSASHSPW*LSIQKP
Trigger: CGGCTTCTGTATGGAGAGTCACCATGGGGAGTGACT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCTGTCATGCACGTTCTaGACATCGCATCGGCCACGT +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSALSCTF*TSHRPR
Trigger: ACGTGGCCGATGCGATGTTCAGAACGTGCATGACAG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCACCCGGCCTCTTTCCTaGACGTTCAGGGTCATGATC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSATRPLS*TFRVMI
Trigger: GATCATGACCCTGAACGTTCAGGAAAGAGGCCGGGT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGGGCAATCAAGAATGTaGTTCGTCGGAGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGGQSRM*FVGVHN
Trigger: ATTATGGACTCCGACGAATCACATTCTTGATTGCCC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACGGAGTTCAGGGAGCTaGTTCTGGTGTAGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPRSSGS*FWCSLG
Trigger: CCCAAGACTACACCAGAATCAGCTCCCTGAACTCCG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAGTCATCTGGCACGGTaGTGTGGGAGACACCATTGT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRSHLAR*CGRHHC
Trigger: ACAATGGTGTCTCCCACATCACCGTGCCAGATGACT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGACCTGTCCTGCCTGCTaGATTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQTCPAC*IILASE
Trigger: TTCTGAGGCCAAGATAATTCAGCAGGCAGGACAGGT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AGCCGGCCCTCCAGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCACCTGTCCTGCCTGCTaGATTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SRPSRSFRSLSERSGSPSTCPAC*IILASE
Trigger: TTCTGAGGCCAAGATAATTCAGCAGGCAGGACAGGT...GCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCCAGGATGTCAGATATaGCGCCCTTCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAPGCQI*RPSPAS
Trigger: GGATGCTGGAGAAGGGCGTCATATCTGACATCCTGG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACCAGGATGTCAGATATaGCGCCCTTCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPPGCQI*RPSPAS
Trigger: GGATGCTGGAGAAGGGCGTCATATCTGACATCCTGG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGGCCTCGGATGGTCTTaGGGACAGAGTCGTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFGLGWS*GQSRAS
Trigger: TGAAGCACGACTCTGTCCTCAAGACCATCCGAGGCC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGTCTTCAGGGTCTGCTaGGGGTGTACGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSVFRVC*GCTGGG
Trigger: CCCACCACCCGTACACCCTCAGCAGACCCTGAAGAC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGCACTCCAGCCTGCATaGCACAGTGAGACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGALQPA*HSETLS
Trigger: AGACAAAGTCTCACTGTGTCATGCAGGCTGGAGTGC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAGATGGAGGTTGCAGTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRRWRLQ*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCACTGCAACCTCCATCT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAAAACCAATTCTTTCTaGTGCCTCCAAGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGKTNSF*CLQALI
Trigger: GATGAGGGCTTGGAGGCAGCAGAAAGAATTGGTTTT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCCCACACGTTCTTGCTaGTCCGGAAATTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQPTRSC*SGNSVP
Trigger: AGGAACTGAATTTCCGGAGCAGCAAGAACGTGTGGG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAACATGGTCAGAGACTaGCGGGCCACCTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCNMVRD*RATLRM
Trigger: CATTCTCAAGGTGGCCCGGCAGTCTCTGACCATGTT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGTATCTCTGGACCAACTaGACGATGCTCTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQYLWTN*TMLWVL
Trigger: CAACACCCAGAGCATCGTGCAGTTGGTCCAGAGATA...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACGCTCACCCTCGTTCTaGAGGTATTCGAAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPRSPSF*RYSKEA
Trigger: AGCCTCCTTCGAATACCTGCAGAACGAGGGTGAGCG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCGGGCCATCTCGGATaGCCGCAGGTACAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAPGHLG*PQVQKV
Trigger: GACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCTTTGGGAATGCCCTCTaGCCGGGCCATCTCGGATGC +
Preference number: 4 (lower is better)
Translates to: RSFRSLSERSGSPSCSMSFGNAL*PGHLGC
Trigger: GCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAA...GCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCGTAAATTTTGGGAATaGCCTCTGCCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRKFWE*PLPGPS
Trigger: AGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAGGCGCCACTGTTGGCTaGCACGTAAATTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPGATVG*HVNFGN
Trigger: ATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCC...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTTGGGTGAGGCCTTCCTaGAAGCATCCACCGGGGGTC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAWVRPS*KHPPGV
Trigger: GACCCCCGGTGGATGCTTGCAGGAAGGCCTCACCCA...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCATCAAAGAATCCGCTCTaGCACGTTCCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPSKNPL*HVPFRV
Trigger: AACTCTGAAGGGAACGTGGCAGAGCGGATTCTTTGA...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGTCTGCGCCCAGGGTaGCATGATTTCCTTGAAACT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGGLRPG*HDFLET
Trigger: AGTTTCAAGGAAATCATGGCACCCTGGGCGCAGACC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCCCTGTCACCACGGTCTaGGCCCAGGGTGCCATGATT +
Preference number: 4 (lower is better)
Translates to: RSFRSLSERSGSPSCSMSPVTTV*AQGAMI
Trigger: AATCATGGCACCCTGGGCGCAGACCGTGGTGACAGG...GCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTGCAGAGCCAGGAGCTaGTGGGTGCATTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSCRARS*WVHCNV
Trigger: AACGTTGCAATGCACCCAGCAGCTCCTGGCTCTGCA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTGGCTCGGCCTGGCTaGGTGTCTTGGGCAGAGTGT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLARPG*VSWAEC
Trigger: ACACTCTGCCCAAGACACCCAGCCAGGCCGAGCCAG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTGCCGACCGGCATCTTTaGGGCCTTTGTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIADRHL*GLCGRL
Trigger: CAGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGC...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTTTTCTTGGGGGCTTCTaGTGGGAGGGTGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFFLGGF*WEGGRE
Trigger: CTCCCTACCACCCTCCCACCAGAAGCCCCCAAGAAA...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAAGGAGGACAGGCCATTaGTATCTGTGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPRRTGH*YLWPPD
Trigger: GTCTGGAGGCCACAGATACCAATGGCCTGTCCTCCT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGGGTTTCAAAAGAAATaGGAGTCACTCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGGFQKK*ESLPMV
Trigger: CACCATGGGGAGTGACTCCCATTTCTTTTGAAACCC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAAAGCAGTGCCCAAATTaGGAATCCGCAAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPKQCPN*ESANSC
Trigger: GCACGAGTTTGCGGATTCCCAATTTGGGCACTGCTT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTCATCGAGCTCCAGCCTaGCCACCACGCAGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIHRAPA*PPRSLL
Trigger: AAGCAGGCTGCGTGGTGGCCAGGCTGGAGCTCGATG...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATGGTGGCTATCTGCTaGCTGGGGAACTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDMVAIC*LGNWHS
Trigger: GCTGTGCCAGTTCCCCAGCCAGCAGATAGCCACCAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGGCAGTCCAGGATGGTaGCTATCTGCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQGSPGW*LSAGWG
Trigger: TCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCC...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCCGCTGCGGTATCTCTaGACCAACTGCACGATGCTC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFPLRYL*TNCTML
Trigger: GAGCATCGTGCAGTTGGTCCAGAGATACCGCAGCGG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTAACATGATCACCAGCTaGTTCTTCTTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVANMITS*FFLATC
Trigger: ACAGGTGGCCAAGAAGAACCAGCTGGTGATCATGTT...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATTCTCGGGGCAGAACTaGTGGCCGTACATGTCAATG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGFSGQN*WPYMSM
Trigger: CATTGACATGTACGGCCACCAGTTCTGCCCCGAGAA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGACACATTCAGAATGTaGATGGGCTCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGDTFRM*MGSSLR
Trigger: CCTCAGAGAAGAGCCCATCCACATTCTGAATGTGTC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGGTCTGCACACTGGATaGACACATTCAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSGLHTG*THSECG
Trigger: TCCACATTCTGAATGTGTCCATCCAGTGTGCAGACC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAGTCATAGATGTAGGTaGTTCCCAGGGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRSHRCR*FPGSGP
Trigger: AGGCCCAGACCCTGGGAACCACCTACATCTATGACT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGTTTGGGATACTTGTCTaGGGAGCCCCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWFGILV*GAPQFK
Trigger: TTTAAACTGTGGGGCTCCCCAGACAAGTATCCCAAA...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCCTGCCACGTAAATTTTaGGAATGCCCTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLLPRKF*ECPLPG
Trigger: CCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAG...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGTCCACCCAAGCCACGTaGAACATGTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQSTQAT*NMCLIS
Trigger: GGAGATCAAACACATGTTCCACGTGGCTTGGGTGGA...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGTCGATGTGTTTACAGTaGACGGAGTTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPESMCLQ*TEFREL
Trigger: CAGCTCCCTGAACTCCGTCCACTGTAAACACATCGA...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTGCTGTGATTATCCTTTaGCATATAGGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: LVLQEEAAQTPIQEGACGAVIIL*HIGQPL
Trigger: GAGTGGCTGTCCTATATGCCAAAGGATAATCACAGC...ACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGGTCGTAGGGAGCTCTaGATGGGAGGAATTCAATTT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSGRREL*MGGIQF
Trigger: AAATTGAATTCCTCCCATCCAGAGCTCCCTACGACC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGTCCTTGAAACTGCCGTaGTCAAAGAATCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPESLKLP*SKNPLC
Trigger: GCAGAGCGGATTCTTTGACCACGGCAGTTTCAAGGA...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCATCCTTGAAACTGCCGTaGTCAAAGAATCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPSLKLP*SKNPLC
Trigger: GCAGAGCGGATTCTTTGACCACGGCAGTTTCAAGGA...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCACCTGGTGGTAGATaGGGAGCAGCAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAPPGGR*GAAGPR
Trigger: GCGAGGACCTGCTGCTCCCCATCTACCACCAGGTGG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCGGCCGGGTGTGTCATaGAAGTCGGCGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNRPGVS*KSANCT
Trigger: GGTGCAGTTCGCCGACTTCCATGACACACCCGGCCG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGCGGCCGGGTGTGTCATaGAAGTCGGCGAACTGCACC +
Preference number: 4 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMRPGVS*KSANCT
Trigger: GGTGCAGTTCGCCGACTTCCATGACACACCCGGCCG...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGCTGGGCTGATGTGCTaGCTCAGGTATATCACACAG +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMAGLMC*LRYITQ
Trigger: CTGTGTGATATACCTGAGCCAGCACATCAGCCCAGC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTTGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTTGGTTCCTTTTGCCGTaGTCCCGGGAGTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIWFLLP*SREWLG
Trigger: GCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCA...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGCCGGCCCTCCAGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTGCATGGGCAACATaGCCCTTATCTTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: SRPSRSFRSLSERSGSPSCAWAT*PLSSTK
Trigger: CTTGGTGGAAGATAAGGGCCATGTTGCCCATGCACA...GCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCTGGAGGGCCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGGTTCCTTGTTTGCTaGGGGCCTGAATCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRFLVC*GPESKP
Trigger: AGGCTTAGATTCAGGCCCTCAGCAAACAAGGAACCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338432.11
CDS-3UTR TCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTCCTGGCTCGGGATaGGGTTTGCTTCTGATTTAC +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPAPGSG*GLLLIY
Trigger: GTAAATCAGAAGCAAACCTCATCCCGAGCCAGGAGC...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTGCCACGCTGGTCATaGTCTCCTGCAGCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLPRWS*SPAAPA
Trigger: TGCTGGAGCTGCAGGAGATCATGACCAGCGTGGCAG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTCGCTTTTGCTCAGCTaGGTGAGCTCGTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSSLLLS*VSSLRM
Trigger: CATCCTCAACGAGCTCACTCAGCTGAGCAAAAGCGA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCGAAGGAGTGAAACATaGTATTTCCAGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGRRSET*YFQIWS
Trigger: ACTCCAGATCTGGAAATATCATGTTTCACTCCTTCG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGACACCATTGTAATGCATaGTCTGAACGCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRHHCNA*SERHPA
Trigger: AGCTGGGTGGCGTTCAGATCATGCATTACAATGGTG...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAACCTGTCCTGCCTGCTaGATTATCTTGGCCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGTCPAC*IILASE
Trigger: TTCTGAGGCCAAGATAATTCAGCAGGCAGGACAGGT...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACCCCTGCTCTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCCCCACAAGTAGGCCTTaGCAGCCCCCTCCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TPALFVCIHFYAQRVDGGPTSRP*QPPPSP
Trigger: TGGAGACGGAGGGGGCTGTCAAGGCCTACTTGTGGG...GCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAGAGCAGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCGTGCTTCAGGTACGTaGTGTTCTCACGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDRASGT*CSHGWW
Trigger: CCACCATCCGTGAGAACATCACGTACCTGAAGCACG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCCCGCTCAGCTGGGCTaGTGTGCTGGCTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNPAQLG*CAGSGI
Trigger: TATACCTGAGCCAGCACATCAGCCCAGCTGAGCGGG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGATGTCCTCCCCACCGTaGATTCAGGGTTACATTTTC +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEMSSPP*IQGYIF
Trigger: GAAAATGTAACCCTGAATGCACGGTGGGGAGGACAT...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000338432.11
CDS-3UTR GCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTTGCGGATGGAGCGCATaGACTTCACGGCGGCAATCC +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFICGWSA*TSRRQS
Trigger: GGATTGCCGCCGTGAAGTGCATGCGCTCCATCCGCA...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCTGATTCTTTTTCCCTaGTGCAGATCATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGLILFP*CRSSSV
Trigger: GACAGAAGATGATCTGCAGCAGGGAAAAAGAATCAG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCAGCAATCATTTCTGTaGAGGGATGTTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQQQSFL*RDVPPA
Trigger: TGCAGGTGGAACATCCCTGCACAGAAATGATTGCTG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGACTGGGCCATCACCCTaGGGACAGACTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQTGPSP*GQTSPQ
Trigger: CTGTGGAGAAGTCTGTCCGCAGGGTGATGGCCCAGT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGATCAGCCTTCCGCTaGAGGGTGGCTGCATGGCAG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSERSAFR*RVAAWQ
Trigger: CTGCCATGCAGCCACCCTGCAGCGGAAGGCTGATCG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCTTCTTGGCCACCTGTaGGTGGGAGAAGATGCAGTC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFLLGHL*VGEDAV
Trigger: GACTGCATCTTCTCCCACGCACAGGTGGCCAAGAAG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGCCAAGTGACGGTAAATaGGATCTTCTGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGPSDGK*DLLQTH
Trigger: ATGAGTTTGCAGAAGATCGCATTTACCGTCACTTGG...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp CTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCCAAGTGACGGTAAATaGGATCTTCTGCAAACTCAT +
Preference number: 4 (lower is better)
Translates to: LVLQEEAAQTPIQEGACGPSDGK*DLLQTH
Trigger: ATGAGTTTGCAGAAGATCGCATTTACCGTCACTTGG...ACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATCCGGGCCATCTCGGATaGCCGCAGGTACAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: HRPLFGHLVESTCSCEDDPGHLG*PQVQKV
Trigger: GACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGG...ATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGGCGCCACTGTTGGCTaGCACGTAAATTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRGATVG*HVNFGN
Trigger: ATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTACTCCCCAGCAATCATaGCTGAGCCCCTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: WADVLAQVYHTVHGHLGVTPQQS*LSPSDS
Trigger: AGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGT...AACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAACAGGTTGGCAGGGTCTaGAGGGACTGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEQVGRV*RDCHLH
Trigger: GTGGAGGTGGCAGTCCCTGCAGACCCTGCCAACCTG...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACAGGTTGGCAGGGTCTaGAGGGACTGCCACCTCCAC +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEQVGRV*RDCHLH
Trigger: GTGGAGGTGGCAGTCCCTGCAGACCCTGCCAACCTG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCAATACAGGAAGGTaGGTGCGGTCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFANTGR*VRSSTP
Trigger: TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGCCTGCAGGATCTCCTaGTTGACCTGGTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSACRIS*LTWSSR
Trigger: CCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGGCCATCCCCTGCCTaGCAGTGCTGTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCGPSPA*QCCSSH
Trigger: GTGGCTGGAACAGCACTGGCAGGCAGGGGATGGCCC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGATCCTTCCCCAATGTaGATGGGCAACATGGCCCTT +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSADPSPM*MGNMAL
Trigger: AAGGGCCATGTTGCCCATGCACATTGGGGAAGGATC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGAGGCTGGCTCGGCCTaGCTGGGTGTCTTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLEAGSA*LGVLGR
Trigger: TCTGCCCAAGACACCCAGCCAGGCCGAGCCAGCCTC...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATCTTTGGGGCCTTTGTaGGAGGCTGGCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSESLGPL*EAGSAW
Trigger: CCAGGCCGAGCCAGCCTCCCACAAAGGCCCCAAAGA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTGTGTCCCAGTCCCGTTaGCTTGAAGCTCTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIVSQSR*LEALGR
Trigger: CCTCCCCAGAGCTTCAAGCCAACGGGACTGGGACAC...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTAGGAGGACAGGCCATTaGTATCTGTGGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFRRTGH*YLWPPD
Trigger: GTCTGGAGGCCACAGATACCAATGGCCTGTCCTCCT...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAACCCCTCTTCACCAGGTaGAGTCCCGACATGCTCGGC +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEPLFTR*SPDMLG
Trigger: GCCGAGCATGTCGGGACTCCACCTGGTGAAGAGGGG...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGATGCCGCCGCTGGATaGAGCAGTCGCGACCAAACA +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSDAAAG*SSRDQT
Trigger: TGTTTGGTCGCGACTGCTCCATCCAGCGGCGGCATC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATGGCGATCTGTAGCTaGGCGGCCGGCAGATTAACA +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDMAICS*AAGRLT
Trigger: TGTTAATCTGCCGGCCGCCCAGCTACAGATCGCCAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTTCAGCCGGTGCAGTaGCACGCCCATGGCGATCTG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSELQPVQ*HAHGDL
Trigger: CAGATCGCCATGGGCGTGCCACTGCACCGGCTGAAG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGCATCAATCTCGATGTaGCAGCCATTCATGATGAGA +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGASISM*QPFMMR
Trigger: TCTCATCATGAATGGCTGCCACATCGAGATTGATGC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTTCCAGCACGGCACCTaGACGCTTGATGTACTTCAC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAFQHGT*TLDVLH
Trigger: GTGAAGTACATCAAGCGTCCAGGTGCCGTGCTGGAA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAAACGGTTCAGCCGGGTaGACTTTAGAAGGGTCATCG +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPNGSAG*TLEGSS
Trigger: CGATGACCCTTCTAAAGTCCACCCGGCTGAACCGTT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGATGGGCAGTGTCTGCTaGGCAGGGAGTTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQMGSVC*AGSSPV
Trigger: CACAGGAGAACTCCCTGCCCAGCAGACACTGCCCAT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACACGCTGTGGAAGACCTaGTGCAGTTTCTCTCCGAGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDTLWKT*CSFSPR
Trigger: CCTCGGAGAGAAACTGCACCAGGTCTTCCACAGCGT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGAACATGATCACCAGCTaGTTCTTCTTGGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPENMITS*FFLATC
Trigger: ACAGGTGGCCAAGAAGAACCAGCTGGTGATCATGTT...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACACGGTCATCCGGTTTaGGTGGGAGGACGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSHGHPV*VGGRQH
Trigger: ATGCTGCCGTCCTCCCACCCAAACCGGATGACCGTG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCATGCGCTGGCACAGTaGGGAGAAGCCGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAHALAQ*GEAAVH
Trigger: ATGGACAGCGGCTTCTCCCCACTGTGCCAGCGCATG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAAGGTGGTCTGCACACTaGATGGACACATTCAGAATG +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPRWSAH*MDTFRM
Trigger: CATTCTGAATGTGTCCATCCAGTGTGCAGACCACCT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTACCTCCAGCTCGTCCATaGCCTCCAGGAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLPPARP*PPGAAA
Trigger: AGCGGCTGCTCCTGGAGGCCATGGACGAGCTGGAGG...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTCCTCCAGCTCGTCCATaGCCTCCAGGAGCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCPPARP*PPGAAA
Trigger: AGCGGCTGCTCCTGGAGGCCATGGACGAGCTGGAGG...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTGGGCCTGGAATCGCTTaGCCTGGAGCAGATCCTTGG +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIGPGIA*PGADPW
Trigger: CCAAGGATCTGCTCCAGGCCAAGCGATTCCAGGCCC...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACCTTCCGGGTACTCCTaGGTCTTAAACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPPSGYS*VLNLIL
Trigger: CAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCTGTGAGGATGATGTaGGAATTCTCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPVRMM*EFSTWI
Trigger: GATCCAGGTGGAGAATTCCCACATCATCCTCACAGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCCCCTCAAAGTCATCTaGCACGGTGATGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFPLKVI*HGDVGD
Trigger: GTCTCCCACATCACCGTGCCAGATGACTTTGAGGGG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGACAGCCACTCCAGGATaGTATAAACCCCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CLTWSSRRRRRRRQYRKVTATPG*YKPPQS
Trigger: ACTTTGAGGGGGTTTATACCATCCTGGAGTGGCTGT...CACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGCTGTGATTATCCTTTaGCATATAGGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAAVIIL*HIGQPL
Trigger: GAGTGGCTGTCCTATATGCCAAAGGATAATCACAGC...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCGTTCCCTTCAGAGTTaGGTGAGGCCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDRSLQS*VRPSCK
Trigger: CTTGCAGGAAGGCCTCACCCAACTCTGAAGGGAACG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCAGAGCTTCTTGTAAGCTaGATCGATCCTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPELLVS*IDPSHG
Trigger: TCCATGAGAAGGATCGATCCAGCTTACAAGAAGCTC...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTGGTGGTGGGTCTGGGTaGTTCCTTTTGCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIGGGSG*FLLPWS
Trigger: GGACCACGGCAAAAGGAACCACCCAGACCCACCACC...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTGGTGGTGGGTCTGGGTaGTTCCTTTTGCCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAGGGSG*FLLPWS
Trigger: GGACCACGGCAAAAGGAACCACCCAGACCCACCACC...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFRVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCTGAGCAAATCGGCATaGTCACCACAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSLSKSA*SPQSSP
Trigger: AGGACTGGACTGTGGTGACCATGCCGATTTGCTCAG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCGACTCCGCCCCAATaGAAGAAACCAGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPTPPQ*KKPEDH
Trigger: GTGATCCTCTGGTTTCTTCCATTGGGGCGGAGTCGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTTACATTCAGCATCCTTaGACAAACCACCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAYIQHP*TNHPSE
Trigger: CTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTA...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTTTTTGGAGGCTTCCCTaGGCAACCTCATGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFFWRLP*ATSWAS
Trigger: GGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAA...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCAGCAAACCTCGGGGTaGAATAATGAATCATTCACC +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAQQTSG*NNESFT
Trigger: GGTGAATGATTCATTATTCCACCCCGAGGTTTGCTG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCACTCTGTACTTGTCTaGAAAGGATCGGGAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMHSVLV*KGSGSP
Trigger: AGGACTTCCCGATCCTTTTCAGACAAGTACAGAGTG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGAACGTTCAGGGTCATaGTCATCTTCATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMERSGS*SSSSPP
Trigger: TGGAGGTGATGAAGATGATCATGACCCTGAACGTTC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCACGGCACCTGGACGCTTaGTGTACTTCACCCGGCCTC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVARHLDA*CTSPGL
Trigger: GAGGCCGGGTGAAGTACATCAAGCGTCCAGGTGCCG...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACTCGCTTTTGCTCAGCTaGGTGAGCTCGTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDSLLLS*VSSLRM
Trigger: CATCCTCAACGAGCTCACTCAGCTGAGCAAAAGCGA...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGATGGCGAAGCAAGAGATaGCTTCATCAAAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGWRSKR*LHQNFW
Trigger: CCAGAAATTTTGATGAAGTCATCTCTTGCTTCGCCA...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGGTTGTTGCCGAAGGAGTaGAACATGATATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SSIRPGVSWKSANCTATWLLPKE*NMIFPD
Trigger: ATCTGGAAATATCATGTTTCACTCCTTCGGCAACAA...CCAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCGTGGAACATGTGTTTaGTCTCCTCTGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSARGTCV*SPLPCQ
Trigger: TTGGCATGGCAGAGGAGATCAAACACATGTTCCACG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGCCCTTCAGAGTTGGGTaGGGCCTTCCTGCAAGCATC +
Preference number: 4 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMPFRVG*GLPASI
Trigger: GATGCTTGCAGGAAGGCCTCACCCAACTCTGAAGGG...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCCAGGATGTCAGATATaGCGCCCTTCTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQPGCQI*RPSPAS
Trigger: GGATGCTGGAGAAGGGCGTCATATCTGACATCCTGG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp ATAGGGCGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACGACTGGATATGCACGTaGCTCAGCTCCCCGCTGGCC +
Preference number: 4 (lower is better)
Translates to: IGRDIDQDGLFVLSKAVHDWICT*LSSPLA
Trigger: GGCCAGCGGGGAGCTGAGTCACGTGCATATCCAGTC...GTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCGCCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACTTGCAACGTTCTCCCTaGGCAAATCGGCATGGTCAC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDLQRSP*ANRHGH
Trigger: GTGACCATGCCGATTTGCTCAGGGAGAACGTTGCAA...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAAGGACTGTCACTGGCTaGTGGTCAGATTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPRTVTG*WSDFVF
Trigger: AAAGACAAAATCTGACCATCAGCCAGTGACAGTCCT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAAGCAACTCCATTCTTaGACAGCAGCTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCKQLHS*TAAPEV
Trigger: AACTTCCGGAGCTGCTGTGCAAGAATGGAGTTGCTT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAACCAATTCTTTCTGCTaGCTCCAAGCCCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRTNSFC*LQALIY
Trigger: GTAGATGAGGGCTTGGAGGCAGCAGAAAGAATTGGT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCCAAGAAGTGGAAGCTaGCATCCTGACTATAGAGGT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCPRSGS*HPDYRG
Trigger: ACCTCTATAGTCAGGATGGCAGCTTCCACTTCTTGG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGACAGCAATCATTTCTGTaGAGGGATGTTCCACCTGCA +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRQQSFL*RDVPPA
Trigger: TGCAGGTGGAACATCCCTGCACAGAAATGATTGCTG...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAAACCCCACACGTTCTTaGTGCTCCGGAAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRNPTRS*CSGNSV
Trigger: AACTGAATTTCCGGAGCAGCAAGAACGTGTGGGGTT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAAACCCCACACGTTCTTaGTGCTCCGGAAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGNPTRS*CSGNSV
Trigger: AACTGAATTTCCGGAGCAGCAAGAACGTGTGGGGTT...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACTGGTCATGATCTCCTaGAGCTCCAGCAGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSLVMIS*SSSSGS
Trigger: ACTGCCGCTGCTGGAGCTGCAGGAGATCATGACCAG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATCCGGGAGCTGCCGGTaGTGCAGGCTGTTTAACTCA +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSSGSCR*CRLFNS
Trigger: TGAGTTAAACAGCCTGCAGCACCGGCAGCTCCCGGA...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGGATGGGAACGGCACTaGCGGTGGTGGTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNGWERH*RWWSGG
Trigger: TCCGCCAGACCACCACCGGCAGTGCCGTTCCCATCC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCGTAAATTTTGGGAATaGCCTCTGCCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDRKFWE*PLPGPS
Trigger: AGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATCAAAGAATCCGCTCTaGCACGTTCCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGSKNPL*HVPFRV
Trigger: AACTCTGAAGGGAACGTGGCAGAGCGGATTCTTTGA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGAACCACACCTGTCCTaGCTGCTGAATTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSEPHLS*LLNYLG
Trigger: GCCAAGATAATTCAGCAGGCAGGACAGGTGTGGTTC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGTTGAGGACAGAGTCGTaGTTCAGGTACGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMLRTES*FRYVMF
Trigger: GAACATCACGTACCTGAAGCACGACTCTGTCCTCAA...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTAGTCACCGACAGCTCTaGCCCTCGGGGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCSHRQL*PSGSDP
Trigger: GGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACT...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGGCCATTGGTATCTGTaGCCTCCAGACCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQGHWYL*PPDLVS
Trigger: GGACACAAGGTCTGGAGGCCACAGATACCAATGGCC...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCAATCAGCTCCACGTTaGCATAGTTGTTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAQSAPR*HSCCYW
Trigger: CCAATAACAACAACTATGCCAACGTGGAGCTGATTG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCAAAGATGGGCGAGCCTaGGATCTCACTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSKDGRA*DLTLYL
Trigger: CAAGTACAGAGTGAGATCCCAGGCTCGCCCATCTTT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATAGCCCACGGTCTTaGCCAGGCGGATGGCACACT +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEHSPRS*PGGWHT
Trigger: AGTGTGCCATCCGCCTGGCCAAGACCGTGGGCTATG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGCATCAATCTCGATGTaGCAGCCATTCATGATGAGA +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQASISM*QPFMMR
Trigger: TCTCATCATGAATGGCTGCCACATCGAGATTGATGC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCATCATTCAGCCGGTaGGCATCAATCTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPSFSR*ASISMW
Trigger: CCACATCGAGATTGATGCCCACCGGCTGAATGATGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCTTCCTTCATGTAGGTaGTGTAGCTGTTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQLPSCR*CSCSHC
Trigger: ACAATGGGAACAGCTACACCACCTACATGAAGGAAG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATGCTGGCTGGGGAACTaGCACAGCACCGAGGTGATG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSECWLGN*HSTEVM
Trigger: CATCACCTCGGTGCTGTGCCAGTTCCCCAGCCAGCA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATGGCTATCTGCTGGCTaGGGAACTGGCACAGCACCG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEWLSAG*GTGTAP
Trigger: CGGTGCTGTGCCAGTTCCCCAGCCAGCAGATAGCCA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAGGCAGTCCAGGATGGTaGCTATCTGCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEGSPGW*LSAGWG
Trigger: TCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCC...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTTTCTCGGGGCAGAACTaGTGGCCGTACATGTCAATG +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFFSGQN*WPYMSM
Trigger: CATTGACATGTACGGCCACCAGTTCTGCCCCGAGAA...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATGCGCTGGCACAGTaGGGAGAAGCCGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEHALAQ*GEAAVH
Trigger: ATGGACAGCGGCTTCTCCCCACTGTGCCAGCGCATG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGGTGGTCTGCACACTaGATGGACACATTCAGAATG +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRWSAH*MDTFRM
Trigger: CATTCTGAATGTGTCCATCCAGTGTGCAGACCACCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTCCACTGTCCCCTCTaGTTCCAGAACACCACCCCT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLHCPL*FQNTTP
Trigger: AGGGGTGGTGTTCTGGAACCAGAGGGGACAGTGGAG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTTGTTCTCACGGATGGTaGAGCGCGGGCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCCSHGW*SAGHPL
Trigger: CAGGGGATGGCCCGCGCTCCACCATCCGTGAGAACA...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGCTGGGCTGATGTGCTaGCTCAGGTATATCACACAG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDAGLMC*LRYITQ
Trigger: CTGTGTGATATACCTGAGCCAGCACATCAGCCCAGC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGAACATGGCCTATCAGTaGGACCCTCCTAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMNMAYQ*DPPSDS
Trigger: TGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTTCTGTGCTCCCCACTTaGGCAAGAGGAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPASVLPT*ARGGCM
Trigger: CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGA...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTCTGTGCTCCCCACTTaGGCAAGAGGAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNSVLPT*ARGGCM
Trigger: CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGA...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTACAGAGCAGTGGGTTGTaGCCAGCTCCCTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLQSSGL*PAPSIP
Trigger: GGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTG...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp GGCTGTTTTTGTTTGGAAGAGGCACTCCTGGGCCTTTaGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GCFCLEEALLGL*LRRVSARNQQP
Trigger: GGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTGGCACACTGCTCCATaGACTCGAATATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNWHTAP*TRIWPA
Trigger: CGCTGGCCATATTCGAGTTCATGGAGCAGTGTGCCA...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGCACTTTCTCAGCAATaGGGTAGTCCAACCACCCGG +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNALSQQ*GSPTTR
Trigger: CCGGGTGGTTGGACTACCTCATTGCTGAGAAAGTGC...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACACCCGGCCTCTTTCCTaGACGTTCAGGGTCATGATC +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNTRPLS*TFRVMI
Trigger: GATCATGACCCTGAACGTTCAGGAAAGAGGCCGGGT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CCTCGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGCTTCTTTGTAGAGGCTaGTGTCCAGGTAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: PRMVLRTESCFRYVMFSRLLCRG*CPGSSP
Trigger: CGGGCTACTACCTGGACATCAGCCTCTACAAAGAAG...CCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACGAAGGAGTGAAACATaGTATTTCCAGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPRRSET*YFQIWS
Trigger: ACTCCAGATCTGGAAATATCATGTTTCACTCCTTCG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAGGCGGTTTTGTAGGCTaGGTCTGGGAACCACACCTG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEGGFVG*VWEPHL
Trigger: CAGGTGTGGTTCCCAGACTCAGCCTACAAAACCGCC...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCGTGCTTCAGGTACGTaGTGTTCTCACGGATGGTGG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIRASGT*CSHGWW
Trigger: CCACCATCCGTGAGAACATCACGTACCTGAAGCACG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATCTCATAGGCCCACCTaGGGATGGAGCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSESHRPT*GWSACT
Trigger: AGTGCATGCGCTCCATCCGCAGGTGGGCCTATGAGA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCAGGGATGTTCCACCTaGAAGCGAGGATTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIQGCST*KRGFSS
Trigger: GGAGCTGAATCCTCGCTTGCAGGTGGAACATCCCTG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACCCCAGGAGAAGCAGTaGCCAAATTGGGAATCCGCA +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSPQEKQ*PNWESA
Trigger: TGCGGATTCCCAATTTGGGCACTGCTTCTCCTGGGG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGTCATCATGAGCTTCTaGACCCACTCCTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPVIMSF*THSFSF
Trigger: AAAGCTGAAGGAGTGGGTGCAGAAGCTCATGATGAC...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAATGTCTGGCTTGAACTaGTCCCTGAGGTTTATCACA +
Preference number: 4 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRMSGLN*SLRFIT
Trigger: TGTGATAAACCTCAGGGAGCAGTTCAAGCCAGACAT...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCATCTATGACGGATGGGAACGGCACTaGCGGTGGTGGTCTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LFVCIHFYAQRVDGGIYDGWERH*RWWSGG
Trigger: TCCGCCAGACCACCACCGGCAGTGCCGTTCCCATCC...GTCATAGATGCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTCAAAGAATCCGCTCTaGCACGTTCCCTTCAGAGTT +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSASKNPL*HVPFRV
Trigger: AACTCTGAAGGGAACGTGGCAGAGCGGATTCTTTGA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp CCTCGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGGGTCTGCGCCCAGGGTaGCATGATTTCCTTGAAACT +
Preference number: 4 (lower is better)
Translates to: PRMVLRTESCFRYVMFSRGLRPG*HDFLET
Trigger: AGTTTCAAGGAAATCATGGCACCCTGGGCGCAGACC...CCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp AGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCATACAGGAAGGTGCGTaGGGTCTTCCACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RSFRSLSERSGSPSCSMSIQEGA*GLPLQD
Trigger: ATCCTGGAGTGGAAGACCGCACGCACCTTCCTGTAT...GCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTGCCAATACAGGAAGGTaGGTGCGGTCTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIANTGR*VRSSTP
Trigger: TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGC...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTTGAGGACAGAGTCGTaGTTCAGGTACGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSALRTES*FRYVMF
Trigger: GAACATCACGTACCTGAAGCACGACTCTGTCCTCAA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCAGCCCTGCAGAAGTaGCCAGGATTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPAALQK*PGFSLF
Trigger: AAACAAAGAAAATCCTGGGCACTTCTGCAGGGCTGC...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTGAGGACCTCGAGCTATaGGAGAGCATCCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIEDLEL*ESILQK
Trigger: CTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTC...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACAGTCACCGACAGCTCTaGCCCTCGGGGTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNSHRQL*PSGSDP
Trigger: GGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACT...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTTGCAGAGCCAGGAGCTaGTGGGTGCATTGCAACGTT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPACRARS*WVHCNV
Trigger: AACGTTGCAATGCACCCAGCAGCTCCTGGCTCTGCA...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAGCTGGAAAGGGCTCCTaGCTCGGGATGAGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEAGKGS*LGMRFA
Trigger: AGCAAACCTCATCCCGAGCCAGGAGCCCTTTCCAGC...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGAGGGTGCTGCGTCACTaGAAGAAAGGGGGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQRVLRH*KKGGFL
Trigger: CAAGAAACCCCCTTTCTTCCAGTGACGCAGCACCCT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCAATCAGCTCCACGTTaGCATAGTTGTTGTTATTGG +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEQSAPR*HSCCYW
Trigger: CCAATAACAACAACTATGCCAACGTGGAGCTGATTG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCACATGGCCTCACTaGGAGGGCCTAAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAPTWPH*EGLRKQ
Trigger: TTGCTTTCTTAGGCCCTCCCAGTGAGGCCATGTGGG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTACTCCTAAGGCCCACATaGCCTCACTGGGAGGGCCTA +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLLLRPT*PHWEGL
Trigger: TAGGCCCTCCCAGTGAGGCCATGTGGGCCTTAGGAG...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGGGTTTCAAAAGAAATaGGAGTCACTCCCCATGGTG +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPGFQKK*ESLPMV
Trigger: CACCATGGGGAGTGACTCCCATTTCTTTTGAAACCC...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACTCCGCTGGGAGGACCTaGCCCCTTTCCAGGGAGTGT +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNSAGRT*PLSREC
Trigger: ACACTCCCTGGAAAGGGGCCAGGTCCTCCCAGCGGA...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCACCTGGGACATGTCTaGCTTGAACTGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAHLGHV*LELLPE
Trigger: CTCAGGGAGCAGTTCAAGCCAGACATGTCCCAGGTG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGACACATTCAGAATGTaGATGGGCTCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLLLRRVSARNQQPCRSADTFRM*MGSSLR
Trigger: CCTCAGAGAAGAGCCCATCCACATTCTGAATGTGTC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTGACACATTCAGAATGTaGATGGGCTCTTCTCTGAGG +
Preference number: 4 (lower is better)
Translates to: WADVLAQVYHTVHGHLGVDTFRM*MGSSLR
Trigger: CCTCAGAGAAGAGCCCATCCACATTCTGAATGTGTC...AACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCAAGGATATTTTTCTTaGACTGTACGAATGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGQGYFS*TVRMSV
Trigger: TACGGACATTCGTACAGTCCAAGAAAAATATCCTTG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGGCCTGGAATCGCTTaGCCTGGAGCAGATCCTTGG +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCGPGIA*PGADPW
Trigger: CCAAGGATCTGCTCCAGGCCAAGCGATTCCAGGCCC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGTGGTTCCCAGGGTCTaGGCCTGGAATCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNVVPRV*AWNRLA
Trigger: GGCCAAGCGATTCCAGGCCCAGACCCTGGGAACCAC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCTTTGGGATACTTGTCTaGGGAGCCCCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCFGILV*GAPQFK
Trigger: TTTAAACTGTGGGGCTCCCCAGACAAGTATCCCAAA...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATTTTGTGGGGGTCTTCTaGGTCCACCCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: HRPLFGHLVESTCSCEDDFVGVF*VHPSHV
Trigger: CACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA...ATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATTTGTGGGGGTCTTCTaGGTCCACCCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEFVGVF*VHPSHV
Trigger: CACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGATATTTAAATCCTTTGTaGGGGTCTTCTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGYLNPL*GSSGST
Trigger: GGTGGACCCAGAAGACCCCCACAAAGGATTTAAATA...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCTATTTAAATCCTTTGTaGGGGTCTTCTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCYLNPL*GSSGST
Trigger: GGTGGACCCAGAAGACCCCCACAAAGGATTTAAATA...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GAGGATGATGTGGGAATTCTCCACCTGGATCACTCGCTGGCCCAGCCTCACCAACCTGTGAGGATGATGTaGGAATTCTCCACCTGGATC +
Preference number: 4 (lower is better)
Translates to: EDDVGILHLDHSLAQPHQPVRMM*EFSTWI
Trigger: GATCCAGGTGGAGAATTCCCACATCATCCTCACAGG...TTGGTGAGGCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCACATCATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp TGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTCCTGCTGAATTATCTTaGCCTCAGAATCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: WADVLAQVYHTVHGHLGVPAELS*PQNPGW
Trigger: CCAACCTGGATTCTGAGGCCAAGATAATTCAGCAGG...AACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGAGAACCCCCTCCAGTTaGCAAAGATCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQRTPSS*QRSSGA
Trigger: TGCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGAGCTTCTTGTAAGCTaGATCGATCCTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMELLVS*IDPSHG
Trigger: TCCATGAGAAGGATCGATCCAGCTTACAAGAAGCTC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAATCTCCTGCTTGACCTaGTCCTCCAGGAGGAGGCGG +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAISCLT*SSRRRR
Trigger: CCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGAT...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCAACCAGGCCTCGGATGGCTGGGCTGATGTGCTaGCTCAGGTATATCACACAG +
Preference number: 4 (lower is better)
Translates to: YITQSTATSGFSSTRPRMAGLMC*LRYITQ
Trigger: CTGTGTGATATACCTGAGCCAGCACATCAGCCCAGC...CATCCGAGGCCTGGTTGAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATACGGGTGGTGGGTCTaGGTGGTTCCTTTTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEYGWWV*VVPFAV
Trigger: CACGGCAAAAGGAACCACCCAGACCCACCACCCGTA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTAGGGTGTACGGGTGGTaGGTCTGGGTGGTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPARVYGW*VWVVPF
Trigger: AAAAGGAACCACCCAGACCCACCACCCGTACACCCT...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTCACCCATCAGAGCAGTaGGTTGTGGCCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCHPSEQ*VVASSL
Trigger: GAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTG...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACAAGCATCCCAGCTTTTaGAGGCTTCCCTGGGCAACC +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNKHPSF*RLPWAT
Trigger: GGTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGATGAGGTTTGCTTCTaGTTTACTCTTGGTGATCGG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSDEVCF*FTLGDR
Trigger: CCGATCACCAAGAGTAAATCAGAAGCAAACCTCATC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCATCTTCTGGGACACTaGTTCTTTTTCCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFHLLGH*FFFPAA
Trigger: TGCAGCAGGGAAAAAGAATCAGTGTCCCAGAAGATG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACACCTTCAGAAGCTTTaGTCATCAATGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPHLQKL*SSMENQ
Trigger: TTGGTTTTCCATTGATGATCAAAGCTTCTGAAGGTG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTATACCACCCCAAGCATaGTATCCGGTTTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAIPPQA*YPVSPP
Trigger: AGGCGGAGAAACCGGATATCATGCTTGGGGTGGTAT...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTATACCACCCCAAGCATaGTATCCGGTTTCTCCGCCT +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIIPPQA*YPVSPP
Trigger: AGGCGGAGAAACCGGATATCATGCTTGGGGTGGTAT...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCTTCTTTGTAGAGGCTaGTGTCCAGGTAGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPALLCRG*CPGSSP
Trigger: CGGGCTACTACCTGGACATCAGCCTCTACAAAGAAG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTTCCACCAGCTGGCCCTaGGAGTCCAACACTAATTCA +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFISTSWP*ESNTNS
Trigger: TGAATTAGTGTTGGACTCTCAGGGCCAGCTGGTGGA...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACAGTCATCTGGCACGGTaGTGTGGGAGACACCATTGT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNSHLAR*CGRHHC
Trigger: ACAATGGTGTCTCCCACATCACCGTGCCAGATGACT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAAGGACTGTCACTGGCTaGTGGTCAGATTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: GRGPRAMREHPPEALKPPRTVTG*WSDFVF
Trigger: AAAGACAAAATCTGACCATCAGCCAGTGACAGTCCT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACTCTTGATGTTTGCCTaGTTCTTGTCTTCTTTGGAG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGLLMFA*FLSSLE
Trigger: CTCCAAAGAAGACAAGAAGCAGGCAAACATCAAGAG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAAGCAACTCCATTCTTaGACAGCAGCTCCGGAAGTT +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDKQLHS*TAAPEV
Trigger: AACTTCCGGAGCTGCTGTGCAAGAATGGAGTTGCTT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCAAGAAGTGGAAGCTaGCATCCTGACTATAGAGGT +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPRSGS*HPDYRG
Trigger: ACCTCTATAGTCAGGATGGCAGCTTCCACTTCTTGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGAATCCGCAAACTCGTaGAGGCCTCCAGTAGCGGCC +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNESANS*RPPVAA
Trigger: GGCCGCTACTGGAGGCCTGCACGAGTTTGCGGATTC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCTGTGGAAGACCTGGTaGAGTTTCTCTCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFILWKTW*SFSPRM
Trigger: CATCCTCGGAGAGAAACTGCACCAGGTCTTCCACAG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACAGCCGCGGATCCCGCTaGGGTATCTCTGGACCAACT +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNSRGSR*GISGPT
Trigger: AGTTGGTCCAGAGATACCGCAGCGGGATCCGCGGCT...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGCACACGACTTTGTTTaGGTGATAGAAGAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GCGKGFLSASVLPTWARGAHDFV*VIEESR
Trigger: CCTACTTTCTTCTATCACGCAAACAAAGTCGTGTGC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCCTCCAAGGACGCCATaGACACGACTTTGTTTGCGT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNPPRTP*TRLCLR
Trigger: ACGCAAACAAAGTCGTGTGCATGGCGTCCTTGGAGG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGTGCCGTCCGGGAGCTaGCGGTGCTGCAGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTVPSGS*RCCRLF
Trigger: AAACAGCCTGCAGCACCGGCAGCTCCCGGACGGCAC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCAACCAGGCCTCGGATGGAACCACACCTGTCCTaGCTGCTGAATTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: YITQSTATSGFSSTRPRMEPHLS*LLNYLG
Trigger: GCCAAGATAATTCAGCAGGCAGGACAGGTGTGGTTC...CATCCGAGGCCTGGTTGAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCATACATGTCTTTCATaGCACCGGAGAACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIHTCLS*HRRTPS
Trigger: GGAGGGGGTTCTCCGGTGGCATGAAAGACATGTATG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTCTTGGGGGCTTCTGGTaGGAGGGTGGTAGGGAGTTT +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCLGGFW*EGGREF
Trigger: AAACTCCCTACCACCCTCCCACCAGAAGCCCCCAAG...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTTTTCTTGGGGGCTTCTaGTGGGAGGGTGGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCFLGGF*WEGGRE
Trigger: CTCCCTACCACCCTCCCACCAGAAGCCCCCAAGAAA...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGTTGGCTTGAAGCTCTaGGGAGGGTGCTGCGTCACT +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCVGLKL*GGCCVT
Trigger: AGTGACGCAGCACCCTCCCCAGAGCTTCAAGCCAAC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTTCTCAGCTTCACCTGTaGTCAGATAAGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYISQLHL*SDKPPG
Trigger: CCCTGGAGGCTTATCTGACCACAGGTGAAGCTGAGA...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCCACATGGCCTCACTaGGAGGGCCTAAGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEPTWPH*EGLRKQ
Trigger: TTGCTTTCTTAGGCCCTCCCAGTGAGGCCATGTGGG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGCAGTGGCACGCCCATaGCGATCTGTAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTAVARP*RSVAGR
Trigger: CCGCCCAGCTACAGATCGCCATGGGCGTGCCACTGC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCCATCATTCAGCCGGTaGGCATCAATCTCGATGTGG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIPSFSR*ASISMW
Trigger: CCACATCGAGATTGATGCCCACCGGCTGAATGATGG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATTGGCCACCTGTGCGTaGGAGAAGATGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLLATCA*EKMQSS
Trigger: GCTGGACTGCATCTTCTCCCACGCACAGGTGGCCAA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCATTGGCCACCTGTGCGTaGGAGAAGATGCAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVALATCA*EKMQSS
Trigger: GCTGGACTGCATCTTCTCCCACGCACAGGTGGCCAA...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACCACGGTCATCCGGTTTaGGTGGGAGGACGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNHGHPV*VGGRQH
Trigger: ATGCTGCCGTCCTCCCACCCAAACCGGATGACCGTG...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCGGAAATTCTTTCTCTTaGGCAATCAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGGNSFS*AIKNVI
Trigger: AATCACATTCTTGATTGCCCAAGAGAAAGAATTTCC...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACATCAGCATCCCGTGCTaGGGCCCTTGCTTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNISIPC*GPCLLP
Trigger: CGGCAACAAGCAAGGGCCCCAGCACGGGATGCTGAT...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTTTGGGATACTTGTCTaGGGAGCCCCACAGTTTAAA +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSFGILV*GAPQFK
Trigger: TTTAAACTGTGGGGCTCCCCAGACAAGTATCCCAAA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATGTCAGGATGTCTTTaGGATACTTGTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDMSGCL*DTCLGS
Trigger: GCTCCCCAGACAAGTATCCCAAAGACATCCTGACAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGTACGGGCGCCACTGTTaGCTGCCACGTAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMYGRHC*LPRKFW
Trigger: CCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTA...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATTTGTGGGGGTCTTCTaGGTCCACCCAAGCCACGTG +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLFVGVF*VHPSHV
Trigger: CACGTGGCTTGGGTGGACCCAGAAGACCCCCACAAA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCCTGCTGAATTATCTTaGCCTCAGAATCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDPAELS*PQNPGW
Trigger: CCAACCTGGATTCTGAGGCCAAGATAATTCAGCAGG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCGATCGATCCTTCTCATaGACTTTATCAGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: KKPEDHRAPGCAACRARSDRSFS*TLSDLS
Trigger: AGAAAGATCTGATAAAGTCCATGAGAAGGATCGATC...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCATCTATGACCCACCTGGTGGTAGATaGGGAGCAGCAGGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LFVCIHFYAQRVDGGIYDPPGGR*GAAGPR
Trigger: GCGAGGACCTGCTGCTCCCCATCTACCACCAGGTGG...GTCATAGATGCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTGAGCAAATCGGCATaGTCACCACAGTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLSKSA*SPQSSP
Trigger: AGGACTGGACTGTGGTGACCATGCCGATTTGCTCAG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp GGCTTCCACATTGACCAGGCATTACATTCAGCATCCTaGGACAAACCACCCATCAGAGCAGTGGGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GFHIDQALHSAS*DKPPIRAVGCG
Trigger: GCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp CTTTTTCAACTTGGATACCCTCAAGCATCCCAGCTTTaGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LFQLGYPQASQL*EASLGNLMGFH
Trigger: GTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTTGAGGGTATCCAAGTTGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp GATCCACTCTGCACAGGCCCCTTTTTGGTCACCTTGTaGAGAGCACTTGCTCCTGTGAGGATGATGTGGGAA +
Preference number: 4 (lower is better)
Translates to: DPLCTGPFLVTL*RALAPVRMMWE
Trigger: TTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTGCAGAGTGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
3UTR CAA 72 bp AAGGATCCACTCTGCACAGGCCCCTTTTTGGTCACCTaGTTGAGAGCACTTGCTCCTGTGAGGATGATGTGG +
Preference number: 4 (lower is better)
Translates to: KDPLCTGPFLVT*LRALAPVRMMW
Trigger: CCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTGCAGAGTGGATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR TCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCTGATTTACTCTTGGTaGTCGGCTTGGAGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPALIYSW*SAWSPS
Trigger: TGACGGACTCCAAGCCGATCACCAAGAGTAAATCAG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTGATTTACTCTTGGTaGTCGGCTTGGAGTCCGTCA +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLIYSW*SAWSPS
Trigger: TGACGGACTCCAAGCCGATCACCAAGAGTAAATCAG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAAATGATCCGCCATCTTaGTGTACTCTGCGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSNDPPS*CTLRWP
Trigger: AGGCCAACGCAGAGTACATCAAGATGGCGGATCATT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGAACGTTCAGGGTCATaGTCATCTTCATCACCTCCA +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQERSGS*SSSSPP
Trigger: TGGAGGTGATGAAGATGATCATGACCCTGAACGTTC...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAAGTCCTCGAATCTCCTaGAGGCTACCATGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLSPRIS*RLPWLP
Trigger: TGGGAGCCATGGTAGCCTTCAGGAGATTCGAGGACT...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTGGCGAAGCAAGAGATaGCTTCATCAAAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSWRSKR*LHQNFW
Trigger: CCAGAAATTTTGATGAAGTCATCTCTTGCTTCGCCA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCCGAAGGAGTGAAACATaGTATTTCCAGATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLRRSET*YFQIWS
Trigger: ACTCCAGATCTGGAAATATCATGTTTCACTCCTTCG...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCTTGTTGCCGAAGGAGTaGAACATGATATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCLLPKE*NMIFPD
Trigger: ATCTGGAAATATCATGTTTCACTCCTTCGGCAACAA...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAATCCACCAGCTGGCCCTaGGAGTCCAACACTAATTCA +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGESTSWP*ESNTNS
Trigger: TGAATTAGTGTTGGACTCTCAGGGCCAGCTGGTGGA...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGGCGGTTTTGTAGGCTaGGTCTGGGAACCACACCTG +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNGGFVG*VWEPHL
Trigger: CAGGTGTGGTTCCCAGACTCAGCCTACAAAACCGCC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCATCTATGACCCCGCTCAGCTGGGCTaGTGTGCTGGCTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: LFVCIHFYAQRVDGGIYDPAQLG*CAGSGI
Trigger: TATACCTGAGCCAGCACATCAGCCCAGCTGAGCGGG...GTCATAGATGCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAAAGCTCTGGGGAGGGTaGTGCGTCACTGGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLKLWGG*CVTGRK
Trigger: CTTTCTTCCAGTGACGCAGCACCCTCCCCAGAGCTT...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGACCAATTCTTTCTGCTaGCTCCAAGCCCTCATCTAC +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQTNSFC*LQALIY
Trigger: GTAGATGAGGGCTTGGAGGCAGCAGAAAGAATTGGT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACCCACACGTTCTTGCTaGTCCGGAAATTCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSPTRSC*SGNSVP
Trigger: AGGAACTGAATTTCCGGAGCAGCAAGAACGTGTGGG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTATCTCTGGACCAACTaGACGATGCTCTGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNYLWTN*TMLWVL
Trigger: CAACACCCAGAGCATCGTGCAGTTGGTCCAGAGATA...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTATGTCTGGCTTGAACTaGTCCCTGAGGTTTATCACA +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFMSGLN*SLRFIT
Trigger: TGTGATAAACCTCAGGGAGCAGTTCAAGCCAGACAT...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGTAAATGCGATCTTCTaGAAACTCATCTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KGFLSASVLPTWARGGCMVNAIF*KLISCS
Trigger: AGAGCAAGAGATGAGTTTGCAGAAGATCGCATTTAC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCGTAAATGCGATCTTCTaGAAACTCATCTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCVNAIF*KLISCS
Trigger: AGAGCAAGAGATGAGTTTGCAGAAGATCGCATTTAC...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTAGTTTAAAGAGAGCCTaGCTGAACATTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFSLKRA*LNISGK
Trigger: CTTCCCGGAAATGTTCAGGCAGGCTCTCTTTAAACT...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTGGGAATTCTTTGGGAATGCCCTCTaGCCGGGCCATCTCGGATGC +
Preference number: 4 (lower is better)
Translates to: FLVTLLRALAPVRMMWEFFGNAL*PGHLGC
Trigger: GCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAA...GAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAACGTAAATTTTGGGAATaGCCTCTGCCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGERKFWE*PLPGPS
Trigger: AGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACG...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CACAGGCCCCTTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATCGTAAATTTTGGGAATaGCCTCTGCCCGGGCCATCT +
Preference number: 4 (lower is better)
Translates to: HRPLFGHLVESTCSCEDDRKFWE*PLPGPS
Trigger: AGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACG...ATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAAGGGGCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAGGTCTGCGCCCAGGGTaGCATGATTTCCTTGAAACT +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEGLRPG*HDFLET
Trigger: AGTTTCAAGGAAATCATGGCACCCTGGGCGCAGACC...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATACATGTCTTTCATaGCACCGGAGAACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEHTCLS*HRRTPS
Trigger: GGAGGGGGTTCTCCGGTGGCATGAAAGACATGTATG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTCCCCGGGCCATCCCCTGCCTaGCAGTGCTGTTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLMDFIRSFFRNLISTVPGPSPA*QCCSSH
Trigger: GTGGCTGGAACAGCACTGGCAGGCAGGGGATGGCCC...GGGGACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAGTGAGATCATGCCACTaGACTCCAGCCTGCATGACA +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEVRSCH*TPACMT
Trigger: TGTCATGCAGGCTGGAGTGCAGTGGCATGATCTCAC...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAACAGGAGATGGAGGTTaGAGTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSTGDGG*SEIMPL
Trigger: CAGTGGCATGATCTCACTGCAACCTCCATCTCCTGT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGCCGACCGGCATCTTTaGGGCCTTTGTGGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTADRHL*GLCGRL
Trigger: CAGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAATCTCAGCTTCACCTGTaGTCAGATAAGCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGESQLHL*SDKPPG
Trigger: CCCTGGAGGCTTATCTGACCACAGGTGAAGCTGAGA...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAAGGCCCACCTGCGGATaGAGCGCATGCACTTCACGG +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTRPTCG*SACTSR
Trigger: CCGTGAAGTGCATGCGCTCCATCCGCAGGTGGGCCT...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTTCACAACAAACCGGATaGCCCGCTCGTTGCGGAACA +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCSQQTG*PARCGT
Trigger: TGTTCCGCAACGAGCGGGCCATCCGGTTTGTTGTGA...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGTTATTGGGCCCTCCTaGGACGGGGACGTAATGATC +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLVIGPS*DGDVMI
Trigger: GATCATTACGTCCCCGTCCCAGGAGGGCCCAATAAC...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTGCACGGGGATTCTCTTaGCAATGTCCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAARGFS*QCPQSA
Trigger: AGCTGATTGTGGACATTGCCAAGAGAATCCCCGTGC...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAAAGCAGTGCCCAAATTaGGAATCCGCAAACTCGTGC +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSKQCPN*ESANSC
Trigger: GCACGAGTTTGCGGATTCCCAATTTGGGCACTGCTT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTATGTTGCTGGCATACTaGGCCATCACCCTGCGGACA +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCMLLAY*AITLRT
Trigger: TGTCCGCAGGGTGATGGCCCAGTATGCCAGCAACAT...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTCACCTGGGACATGTCTaGCTTGAACTGCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCHLGHV*LELLPE
Trigger: CTCAGGGAGCAGTTCAAGCCAGACATGTCCCAGGTG...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGCAGGACGTCGAAGATaGTTGTTTCCGAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSAGRRR*LFPKVL
Trigger: TAATACTTTCGGAAACAACCATCTTCGACGTCCTGC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGCAAGGATATTTTTCTTaGACTGTACGAATGTCCGTA +
Preference number: 4 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEQGYFS*TVRMSV
Trigger: TACGGACATTCGTACAGTCCAAGAAAAATATCCTTG...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTCTTCCACTCCAGGAAATTCTTTCTCTTaGGCAATCAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: GGGGADANTGRCVRSSTPGNSFS*AIKNVI
Trigger: AATCACATTCTTGATTGCCCAAGAGAAAGAATTTCC...TGGAGTGGAAGACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCGGATGAAGAACCTATaGTCCGTCACTTCCACACCT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPARMKNL*SVTSTP
Trigger: AGGTGTGGAAGTGACGGACCATAGGTTCTTCATCCG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAAAGTCATAGATGTAGGTaGTTCCCAGGGTCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGESHRCR*FPGSGP
Trigger: AGGCCCAGACCCTGGGAACCACCTACATCTATGACT...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCAACCAGGCCTCGGATGCCTTCCGGGTACTCCTaGGTCTTAAACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: YITQSTATSGFSSTRPRMPSGYS*VLNLIL
Trigger: CAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGG...CATCCGAGGCCTGGTTGAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAATACGGGCGCCACTGTTaGCTGCCACGTAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEYGRHC*LPRKFW
Trigger: CCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTA...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACGATGTATGGGAATTCTCCACCTaGATCACTCGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RDIDQDGLFVLSKAVHDVWEFST*ITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCA...TACATCGTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACACCCAGCTGGTTGTTaGATGTGTAGACCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSHPAGC*MCRPLF
Trigger: GAAGAGAGGTCTACACATCCAACAACCAGCTGGGTG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CCTCGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGGGTCGTAGGGAGCTCTaGATGGGAGGAATTCAATTT +
Preference number: 4 (lower is better)
Translates to: PRMVLRTESCFRYVMFSRGRREL*MGGIQF
Trigger: AAATTGAATTCCTCCCATCCAGAGCTCCCTACGACC...CCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAAAGATTTCACGATGTaGTATCCAAGGATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQKDFTM*YPRILK
Trigger: CTTTAGGATCCTTGGATACCACATCGTGAAATCTTT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAAGAGCCAGGAGCTGCTaGGTGCATTGCAACGTTCTC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVARARSC*VHCNVL
Trigger: GAGAACGTTGCAATGCACCCAGCAGCTCCTGGCTCT...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACCTGCGGTGTCTCCCCTaGGTTATCAGAGGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNLRCLP*VIRGWK
Trigger: TTTCCAGCCTCTGATAACTCAGGGGAGACACCGCAG...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCACAAAAGAGCCCAGGATaGAGTTGGTCATCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAQKSPG*SWSSAA
Trigger: GGCAGCTGATGACCAACTTCATCCTGGGCTCTTTTG...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAAAGTTTAGGGTTTTCTaGAGCATGGCCCCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLKFRVF*SMAPAS
Trigger: GCTGGCTGGGGCCATGCTTCAGAAAACCCTAAACTT...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTGCTCATCGATCAACATaGTCACCAGCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYIAHRST*SPAGSS
Trigger: AGAAGAACCAGCTGGTGATCATGTTGATCGATGAGC...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACCCGCTCAGCTGGGCTaGTGTGCTGGCTCAGGTATA +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTPAQLG*CAGSGI
Trigger: TATACCTGAGCCAGCACATCAGCCCAGCTGAGCGGG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTACGGTAAAGTCTCTGTaGAGGTCCAGCTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYITVKSL*RSSFLC
Trigger: ACACAAGAAGCTGGACCTGCACAGAGACTTTACCGT...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAACGGTAAAGTCTCTGTaGAGGTCCAGCTTCTTGTGT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSTVKSL*RSSFLC
Trigger: ACACAAGAAGCTGGACCTGCACAGAGACTTTACCGT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTACTGTGGAAGACCTGGTaGAGTTTCTCTCCGAGGATG +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLLWKTW*SFSPRM
Trigger: CATCCTCGGAGAGAAACTGCACCAGGTCTTCCACAG...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCGGGGTTGTAAATGCGATCTTCTaGAAACTCATCTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: WADVLAQVYHTVHGHLGVVNAIF*KLISCS
Trigger: AGAGCAAGAGATGAGTTTGCAGAAGATCGCATTTAC...AACCCCGAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACTTGATCAGCATCCCGTaGTGGGGCCCTTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNLISIP*WGPCLL
Trigger: CAACAAGCAAGGGCCCCAGCACGGGATGCTGATCAA...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGAGGCTTCCCTGGGCAACCTCATGGGCTTCCACATTGACCAGGCATTACATTCTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: WRLPWATSWASTLTRHYILVEST*SCEDDV
Trigger: CACATCATCCTCACAGGAGCAAGTGCTCTCAACAAG...AATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGTTGCCCAGGGAAGCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACGGCCATTGGTATCTGTaGCCTCCAGACCTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNGHWYL*PPDLVS
Trigger: GGACACAAGGTCTGGAGGCCACAGATACCAATGGCC...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGCTTCTTGTCTTCTTTaGAGGGGGAGCCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCASCLL*RGSQLA
Trigger: AGCAAGCTGGCTCCCCCTCCAAAGAAGACAAGAAGC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCTTCCTTCATGTAGGTaGTGTAGCTGTTCCCATTGT +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQLPSCR*CSCSHC
Trigger: ACAATGGGAACAGCTACACCACCTACATGAAGGAAG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGCTAAAAACGGGCTCTaGCAGACAAAAGCCACTCAT +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSAKNGL*QTKATH
Trigger: ATGAGTGGCTTTTGTCTGCCAGAGCCCGTTTTTAGC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACAACTGCACGATGCTCTaGGTGTTGATGAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNNCTML*VLMKKT
Trigger: GGTCTTCTTCATCAACACCCAGAGCATCGTGCAGTT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACGCAGGACGTCGAAGATaGTTGTTTCCGAAAGTATTA +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDAGRRR*LFPKVL
Trigger: TAATACTTTCGGAAACAACCATCTTCGACGTCCTGC...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACATGCGCTGGCACAGTaGGGAGAAGCCGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTHALAQ*GEAAVH
Trigger: ATGGACAGCGGCTTCTCCCCACTGTGCCAGCGCATG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CGGATGGTCTTGAGGACAGAGTCGTGCTTCAGGTACGTGATGTTCTCACGGATGGGTCTGCACACTGGATaGACACATTCAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: RMVLRTESCFRYVMFSRMGLHTG*THSECG
Trigger: TCCACATTCTGAATGTGTCCATCCAGTGTGCAGACC...CATCCGTGAGAACATCACGTACCTGAAGCACGACTCTGTCCTCAAGACCATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATCGATGTGTTTACAGTaGACGGAGTTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSESMCLQ*TEFREL
Trigger: CAGCTCCCTGAACTCCGTCCACTGTAAACACATCGA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACACAGCCACTCCAGGATaGTATAAACCCCCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNTATPG*YKPPQS
Trigger: ACTTTGAGGGGGTTTATACCATCCTGGAGTGGCTGT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGCTGTGATTATCCTTTaGCATATAGGACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: LEEALLGLLLRRVSARNQAVIIL*HIGQPL
Trigger: GAGTGGCTGTCCTATATGCCAAAGGATAATCACAGC...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAAGAACCCCCTCCAGTTaGCAAAGATCATCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVARTPSS*QRSSGA
Trigger: TGCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCT...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGAGGCTGTTTTTGTTTaGAAGAGGCACTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCEAVFV*KRHSWA
Trigger: GGCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAAACATGGCCTATCAGTaGGACCCTCCTAGTGATTCA +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSNMAYQ*DPPSDS
Trigger: TGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACACCCATCAGAGCAGTaGGTTGTGGCCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTHPSEQ*VVASSL
Trigger: GAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAAGCTCATCGATCAACATaGTCACCAGCTGGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEAHRST*SPAGSS
Trigger: AGAAGAACCAGCTGGTGATCATGTTGATCGATGAGC...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TATATCACACAGTCCACGGCCACCTCGGGGTTTTCTTCAACCAGGCCTCGGATGTGGCGAAGCAAGAGATaGCTTCATCAAAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: YITQSTATSGFSSTRPRMWRSKR*LHQNFW
Trigger: CCAGAAATTTTGATGAAGTCATCTCTTGCTTCGCCA...CATCCGAGGCCTGGTTGAAGAAAACCCCGAGGTGGCCGTGGACTGTGTGATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGGGCAATCAAGAATGTaGTTCGTCGGAGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNGQSRM*FVGVHN
Trigger: ATTATGGACTCCGACGAATCACATTCTTGATTGCCC...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGCACGCTGGTGTTATTaGACGCCACCTCCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTARWCY*TPPPAR
Trigger: ACGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCATACATTTTTCTGGGTaGCTAGACAGTATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSIHFSG*LDSIQR
Trigger: TCTTTGGATACTGTCTAGTCACCCAGAAAAATGTAT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AATGGCTCGGCAGGTCACCAAGCTAATGGTGACGATCTCTTCGTAAGCCAGAGAATGGGAATGTTAAAATaGCTCCTGGCCCCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NGSAGHQANGDDLFVSQRMGMLK*LLAPKD
Trigger: ATCCTTGGGGGCCAGGAGTCATTTTAACATTCCCAT...TCTCTGGCTTACGAAGAGATCGTCACCATTAGCTTGGTGACCTGCCGAGCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAAGGATGGTGGCTATCTaGTGGCTGGGGAACTGGCAC +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTRMVAI*WLGNWH
Trigger: GTGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCT...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTAGTTTAAAGAGAGCCTaGCTGAACATTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPASLKRA*LNISGK
Trigger: CTTCCCGGAAATGTTCAGGCAGGCTCTCTTTAAACT...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AATGGCTCGGCAGGTCACCAAGCTAATGGTGACGATCTCTTCGTAAGCCAGAGACTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: NGSAGHQANGDDLFVSQRLVEST*SCEDDV
Trigger: CACATCATCCTCACAGGAGCAAGTGCTCTCAACAAG...TCTCTGGCTTACGAAGAGATCGTCACCATTAGCTTGGTGACCTGCCGAGCCATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGAACCACACCTGTCCTaGCTGCTGAATTATCTTGGC +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCEPHLS*LLNYLG
Trigger: GCCAAGATAATTCAGCAGGCAGGACAGGTGTGGTTC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCAGCACGGGGATTCTCTTaGCAATGTCCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAARGFS*QCPQSA
Trigger: AGCTGATTGTGGACATTGCCAAGAGAATCCCCGTGC...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCTTAAAACCCTCGTCTaGGTTTTCGCTGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPALKTLV*VFAGDS
Trigger: AGAATCACCAGCGAAAACCCAGACGAGGGTTTTAAG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACTTCCAGCACGGCACCTaGACGCTTGATGTACTTCAC +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNFQHGT*TLDVLH
Trigger: GTGAAGTACATCAAGCGTCCAGGTGCCGTGCTGGAA...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATTTTCCAGGACGCTGTaGAAGACCTGGTGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLFSRTL*KTWCSF
Trigger: GAAACTGCACCAGGTCTTCCACAGCGTCCTGGAAAA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAAACTGCACGATGCTCTaGGTGTTGATGAAGAAGACC +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSENCTML*VLMKKT
Trigger: GGTCTTCTTCATCAACACCCAGAGCATCGTGCAGTT...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCATGGCAGACAGGAAAATaGACTCCACCTGGTTATGCC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAWQTGK*TPPGYA
Trigger: GGCATAACCAGGTGGAGTCCATTTTCCTGTCTGCCA...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTACGGATGAAGAACCTATaGTCCGTCACTTCCACACCT +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLRMKNL*SVTSTP
Trigger: AGGTGTGGAAGTGACGGACCATAGGTTCTTCATCCG...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCATCCACCCAAGCCACGTaGAACATGTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVASTQAT*NMCLIS
Trigger: GGAGATCAAACACATGTTCCACGTGGCTTGGGTGGA...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTTATTTAAATCCTTTGTaGGGGTCTTCTGGGTCCACC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAYLNPL*GSSGST
Trigger: GGTGGACCCAGAAGACCCCCACAAAGGATTTAAATA...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCATCTATGACCGTTCCCTTCAGAGTTaGGTGAGGCCTTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LFVCIHFYAQRVDGGIYDRSLQS*VRPSCK
Trigger: CTTGCAGGAAGGCCTCACCCAACTCTGAAGGGAACG...GTCATAGATGCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCTGCTGAATTATCTTaGCCTCAGAATCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEPAELS*PQNPGW
Trigger: CCAACCTGGATTCTGAGGCCAAGATAATTCAGCAGG...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGAGCTTCTTGTAAGCTaGATCGATCCTTCTCATGGA +
Preference number: 4 (lower is better)
Translates to: MREHPPEALKPPAGYFHSELLVS*IDPSHG
Trigger: TCCATGAGAAGGATCGATCCAGCTTACAAGAAGCTC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCTGAAACCTCCAGCTaGGTACTTCCATTCATTTTG +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAPETSS*VLPFIL
Trigger: CAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp ACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCAGCAAACCTCGGGGTaGAATAATGAATCATTCACC +
Preference number: 4 (lower is better)
Translates to: TFSILGQTTHQSSGLWPAQQTSG*NNESFT
Trigger: GGTGAATGATTCATTATTCCACCCCGAGGTTTGCTG...AGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp CTCTTTGTCTGCATACATTTCTATGCACAGCGGGTTGATGGTGGCATCTATGACTCCACCAGCTGGCCCTaGGAGTCCAACACTAATTCA +
Preference number: 4 (lower is better)
Translates to: LFVCIHFYAQRVDGGIYDSTSWP*ESNTNS
Trigger: TGAATTAGTGTTGGACTCTCAGGGCCAGCTGGTGGA...GTCATAGATGCCACCATCAACCCGCTGTGCATAGAAATGTATGCAGACAAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACCGTGGAACATGTGTTTaGTCTCCTCTGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNRGTCV*SPLPCQ
Trigger: TTGGCATGGCAGAGGAGATCAAACACATGTTCCACG...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACATACATTTTTCTGGGTaGCTAGACAGTATCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDIHFSG*LDSIQR
Trigger: TCTTTGGATACTGTCTAGTCACCCAGAAAAATGTAT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CAGGCATTACATTCAGCATCCTTGGACAAACCACCCATCAGAGCAGTGGGTTGTGTCATCATGAGCTTCTaGACCCACTCCTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: QALHSASLDKPPIRAVGCVIMSF*THSFSF
Trigger: AAAGCTGAAGGAGTGGGTGCAGAAGCTCATGATGAC...ACAACCCACTGCTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTAATGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp CGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACGATGTAATCCTCCAGGTGGTCTaGACACTGGATGGACACATT +
Preference number: 4 (lower is better)
Translates to: RDIDQDGLFVLSKAVHDVILQVV*TLDGHI
Trigger: AATGTGTCCATCCAGTGTGCAGACCACCTGGAGGAT...TACATCGTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR GCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAAGTTTAAAGAGAGCCTaGCTGAACATTTCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSESLKRA*LNISGK
Trigger: CTTCCCGGAAATGTTCAGGCAGGCTCTCTTTAAACT...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR GCA 90 bp ATAGGGCGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACTTGAGGACAGAGTCGTaGTTCAGGTACGTGATGTTC +
Preference number: 4 (lower is better)
Translates to: IGRDIDQDGLFVLSKAVHLRTES*FRYVMF
Trigger: GAACATCACGTACCTGAAGCACGACTCTGTCCTCAA...GTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCGCCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp ACCTCATGGGCTTCCACATTGACCAGGCATTACATTCAGCATCCTTGGACAAACAAAGATGGGCGAGCCTaGGATCTCACTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: TSWASTLTRHYIQHPWTNKDGRA*DLTLYL
Trigger: CAAGTACAGAGTGAGATCCCAGGCTCGCCCATCTTT...GTTTGTCCAAGGATGCTGAATGTAATGCCTGGTCAATGTGGAAGCCCATGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACCAAGGATATTTTTCTTaGACTGTACGAATGTCCGTA +
Preference number: 4 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDQGYFS*TVRMSV
Trigger: TACGGACATTCGTACAGTCCAAGAAAAATATCCTTG...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCGGAAATTCTTTCTCTTaGGCAATCAAGAATGTGATT +
Preference number: 4 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSGNSFS*AIKNVI
Trigger: AATCACATTCTTGATTGCCCAAGAGAAAGAATTTCC...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCACCTTCCGGGTACTCCTaGGTCTTAAACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVAPSGYS*VLNLIL
Trigger: CAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGG...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp CGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACGATGTATCCACCCAAGCCACGTaGAACATGTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: RDIDQDGLFVLSKAVHDVSTQAT*NMCLIS
Trigger: GGAGATCAAACACATGTTCCACGTGGCTTGGGTGGA...TACATCGTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGATCGATCCTTCTCATaGACTTTATCAGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFDRSFS*TLSDLS
Trigger: AGAAAGATCTGATAAAGTCCATGAGAAGGATCGATC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTCAAAAAGAGAATCCCTaGCAACCAGTGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIQKENP*QPVLNM
Trigger: CATGTTTAGCACTGGTTGCCAGGGATTCTCTTTTTG...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCACCTTCAGAAGCTTTaGTCATCAATGGAAAACCAA +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNHLQKL*SSMENQ
Trigger: TTGGTTTTCCATTGATGATCAAAGCTTCTGAAGGTG...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGGGCAATCAAGAATGTaGTTCGTCGGAGTCCATAAT +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLGQSRM*FVGVHN
Trigger: ATTATGGACTCCGACGAATCACATTCTTGATTGCCC...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTTGTTGCCGAAGGAGTaGAACATGATATTTCCAGAT +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNLLPKE*NMIFPD
Trigger: ATCTGGAAATATCATGTTTCACTCCTTCGGCAACAA...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR TCA 90 bp TTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTGGGAATTCCGTGGAACATGTGTTTaGTCTCCTCTGCCATGCCAA +
Preference number: 4 (lower is better)
Translates to: FLVTLLRALAPVRMMWEFRGTCV*SPLPCQ
Trigger: TTGGCATGGCAGAGGAGATCAAACACATGTTCCACG...GAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR TCA 90 bp GATCCTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTATGGTAGACAGCAGGTaGACGACCTGCGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: DPSHGLYQIFLSELNLHCMVDSR*TTCARS
Trigger: TGAGCGGGCGCAGGTCGTTCACCTGCTGTCTACCAT...ACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAAGATGGAGGTTGCAGTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTRWRLQ*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCACTGCAACCTCCATCT...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACCTCCAAGGACGCCATaGACACGACTTTGTTTGCGT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTPPRTP*TRLCLR
Trigger: ACGCAAACAAAGTCGTGTGCATGGCGTCCTTGGAGG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAATACAGGAAGGTGCGTaGGGTCTTCCACTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTIQEGA*GLPLQD
Trigger: ATCCTGGAGTGGAAGACCGCACGCACCTTCCTGTAT...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACGCCTGGATCCCACATaGCAGGCACTGTTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTRLDPT*QALFCK
Trigger: TTTGCAAAACAGTGCCTGGCATGTGGGATCCAGGCG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACATACGGGCGCCACTGTTaGCTGCCACGTAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTYGRHC*LPRKFW
Trigger: CCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTA...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTATGCTTACTTACATCTaGTGCTGGTCTCAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: ARASSRSPETSSWVLPFIMLTYI*CWSQSK
Trigger: TTTACTCTGAGACCAGCACCAGATGTAAGTAAGCAT...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAACAAAAAGAGAATCCCTaGCAACCAGTGCTAAACATG +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEQKENP*QPVLNM
Trigger: CATGTTTAGCACTGGTTGCCAGGGATTCTCTTTTTG...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTATACATTCAGCATCCTTaGACAAACCACCCATCAGAG +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLYIQHP*TNHPSE
Trigger: CTCTGATGGGTGGTTTGTCCAAGGATGCTGAATGTA...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAAAAAGTATTAATTTCTTaGGGTTCTCGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEKVLIS*GSRGRT
Trigger: AGTTCTGCCCCGAGAACCTCAAGAAATTAATACTTT...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCACTGATTCTTTTTCCCTaGTGCAGATCATCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVALILFP*CRSSSV
Trigger: GACAGAAGATGATCTGCAGCAGGGAAAAAGAATCAG...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AGCTCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCCACCCCAAGGATCCACTCTaGACAGGCCCCTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SSCISRNETGFILRKIPHPKDPL*TGPFLV
Trigger: GACCAAAAAGGGGCCTGTGCAGAGTGGATCCTTGGG...GTGGGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp TTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTGGGAATTCCCTTCCGGGTACTCCTaGGTCTTAAACCTCATTTTG +
Preference number: 4 (lower is better)
Translates to: FLVTLLRALAPVRMMWEFPSGYS*VLNLIL
Trigger: CAAAATGAGGTTTAAGACCCAGGAGTACCCGGAAGG...GAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp TCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCCACCAGCTGCCACGTAAATTTTaGGAATGCCCTCTGCCCGGG +
Preference number: 4 (lower is better)
Translates to: SCISRNETGFILRKIPHQLPRKF*ECPLPG
Trigger: CCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAG...CTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp AAGAGCTCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCTGGGAATTCTCCACCTaGATCACTCGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSSCISRNETGFILRKIPWEFST*ITRWPS
Trigger: GCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCA...GGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGAGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp AACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAGCGCCATTTGGGGAAATGCTTACTTACATCTaGTGCTGGTCTCAGAGTAAA +
Preference number: 4 (lower is better)
Translates to: NMAYQWDPPSDSLAPFGEMLTYI*CWSQSK
Trigger: TTTACTCTGAGACCAGCACCAGATGTAAGTAAGCAT...TTCCCCAAATGGCGCTAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACATCCATACATTTTTCTaGGTGACTAGACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: CLEEALLGLLLRRVSARNIHTFF*VTRQYP
Trigger: TGGATACTGTCTAGTCACCCAGAAAAATGTATGGAT...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
3UTR CAA 72 bp AGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTTaGCTTTCCCTCTCTCAAAAAGAGAATCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SPETSSWVLPFI*LSLSQKENPWQ
Trigger: TTGCCAGGGATTCTCTTTTTGAGAGAGGGAAAGCAAAATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACATCTTCTGGGACACTaGTTCTTTTTCCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTHLLGH*FFFPAA
Trigger: TGCAGCAGGGAAAAAGAATCAGTGTCCCAGAAGATG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAAAATCACTTTATTCCTaGCGCTTTTCTCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLKSLYS*RFSLAM
Trigger: CATGGCAAGAGAAAAGCGGCAGGAATAAAGTGATTT...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338432.11
CDS-3UTR GCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACACTTGTTGAGAGCACTTaGTCCTGTGAGGATGATGTG +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTLVEST*SCEDDV
Trigger: CACATCATCCTCACAGGAGCAAGTGCTCTCAACAAG...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAGGTCTGCACACTGGATaGACACATTCAGAATGTGGA +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTGLHTG*THSECG
Trigger: TCCACATTCTGAATGTGTCCATCCAGTGTGCAGACC...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CCA 90 bp TCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCCACCAGTACGGGCGCCACTGTTaGCTGCCACGTAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: SCISRNETGFILRKIPHQYGRHC*LPRKFW
Trigger: CCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTA...CTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp GATCCTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTCCCCTCAAAGTCATCTaGCACGGTGATGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: DPSHGLYQIFLSELNLHCPLKVI*HGDVGD
Trigger: GTCTCCCACATCACCGTGCCAGATGACTTTGAGGGG...ACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp GATCCTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTACCAGCGACGCAGCATaGACTGGATATGCACGTGAC +
Preference number: 4 (lower is better)
Translates to: DPSHGLYQIFLSELNLHCTSDAA*TGYARD
Trigger: GTCACGTGCATATCCAGTCCATGCTGCGTCGCTGGT...ACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAAAAAGATTTCACGATGTaGTATCCAAGGATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSEKDFTM*YPRILK
Trigger: CTTTAGGATCCTTGGATACCACATCGTGAAATCTTT...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR TCA 90 bp TTTTTGGTCACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTGGGAATTCAAACTGGCTTCATATTaGGAAAAATCCCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: FLVTLLRALAPVRMMWEFKLASY*EKSPTR
Trigger: TCTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTT...GAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTGACCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp CTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTCCCCATGTCAGGATGTCTTTaGGATACTTGTCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LLMDFIRSFFRNLISTVPMSGCL*DTCLGS
Trigger: GCTCCCCAGACAAGTATCCCAAAGACATCCTGACAT...GGGGACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp TCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCCACCAGTCCACCCAAGCCACGTaGAACATGTGTTTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SCISRNETGFILRKIPHQSTQAT*NMCLIS
Trigger: GGAGATCAAACACATGTTCCACGTGGCTTGGGTGGA...CTGGTGGGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp TGGCAACCAGTGCTAAACATGGCCTATCAGTGGGACCCTCCTAGTGATTCACTAATCCATACATTTTTCTaGGTGACTAGACAGTATCCA +
Preference number: 4 (lower is better)
Translates to: WQPVLNMAYQWDPPSDSLIHTFF*VTRQYP
Trigger: TGGATACTGTCTAGTCACCCAGAAAAATGTATGGAT...TAGTGAATCACTAGGAGGGTCCCACTGATAGGCCATGTTTAGCACTGGTTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp AAGAGCTCTTGTATCAGTAGGAATGAAACTGGCTTCATATTGAGAAAAATCCCCGGCGCCACTGTTGGCTaGCACGTAAATTTTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KSSCISRNETGFILRKIPGATVG*HVNFGN
Trigger: ATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCC...GGGGATTTTTCTCAATATGAAGCCAGTTTCATTCCTACTGATACAAGAGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR CCA 90 bp GATCCTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTTCCTTGAAACTGCCGTaGTCAAAGAATCCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPSHGLYQIFLSELNLHCSLKLP*SKNPLC
Trigger: GCAGAGCGGATTCTTTGACCACGGCAGTTTCAAGGA...ACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CCA 90 bp CGGGATATAGATCAGGATGGGCTGTTTGTATTGTCTAAGGCCGTCCACGATGTAGATCGATCCTTCTCATaGACTTTATCAGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: RDIDQDGLFVLSKAVHDVDRSFS*TLSDLS
Trigger: AGAAAGATCTGATAAAGTCCATGAGAAGGATCGATC...TACATCGTGGACGGCCTTAGACAATACAAACAGCCCATCCTGATCTATATCCCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR TCA 90 bp AAAAGATTTCACGATGTGGTATCCAAGGATCCTAAAGAACGCCTGGATCCCACAAAAGTATTAATTTCTTaGGGTTCTCGGGGCAGAACT +
Preference number: 4 (lower is better)
Translates to: KRFHDVVSKDPKERLDPTKVLIS*GSRGRT
Trigger: AGTTCTGCCCCGAGAACCTCAAGAAATTAATACTTT...TGTGGGATCCAGGCGTTCTTTAGGATCCTTGGATACCACATCGTGAAATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR GCA 90 bp ATAAAGACAGAAGATGAGAGGGAACTATACCAGAATGATAGAAGCTGCAAAATTACTCCCCAGCAATCATaGCTGAGCCCCTCAGATTCT +
Preference number: 4 (lower is better)
Translates to: IKTEDERELYQNDRSCKITPQQS*LSPSDS
Trigger: AGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGT...AATTTTGCAGCTTCTATCATTCTGGTATAGTTCCCTCTCATCTTCTGTCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536440.2
CDS-3UTR GCA 90 bp GATCCTTCTCATGGACTTTATCAGATCTTTCTTTCGGAACTTAATCTCCACTGTGCAGCCCTGCAGAAGTaGCCAGGATTTTCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DPSHGLYQIFLSELNLHCAALQK*PGFSLF
Trigger: AAACAAAGAAAATCCTGGGCACTTCTGCAGGGCTGC...ACAGTGGAGATTAAGTTCCGAAAGAAAGATCTGATAAAGTCCATGAGAAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS GCA 90 bp CGGAGGCCGAGATGCAGTCCTAGAGCGCCGCGGGCGGGGTTCTGCTaGAGCCGGCGGGCGCCCAACTTCGCGCTGCGCTTGCTCCATCCC +
Preference number: 5 (lower is better)
Translates to: RRPRCSPRAPRAGFC*SRRAPNFALRLLHP
Trigger: GGGATGGAGCAAGCGCAGCGCGAAGTTGGGCGCCCGCCGGCTGCAGCAGAACCCCGCCCGCGGCGCTCTAGGACTGCATCTCGGCCTCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544726.2
CDS GCA 90 bp ACCCGGAGGCCGAGATGCAGTCCTAGAGCGCCGCGGGCGGGGTTCTaGTGCAGCCGGCGGGCGCCCAACTTCGCGCTGCGCTTGCTCCAT +
Preference number: 5 (lower is better)
Translates to: TRRPRCSPRAPRAGF*CSRRAPNFALRLLH
Trigger: ATGGAGCAAGCGCAGCGCGAAGTTGGGCGCCCGCCGGCTGCAGCAGAACCCCGCCCGCGGCGCTCTAGGACTGCATCTCGGCCTCCGGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544726.2
CDS GCA 90 bp TCCACAGGGGCGGGGATGCGGCCTGCCACGCTGGTCATGATCTCCTaGAGCTCCAGCAGCGGCAGTGACGGGTGCCGGAGGGTCATCATG +
Preference number: 5 (lower is better)
Translates to: STGAGMRPATLVMIS*SSSSGSDGCRRVIM
Trigger: CATGATGACCCTCCGGCACCCGTCACTGCCGCTGCTGGAGCTGCAGGAGATCATGACCAGCGTGGCAGGCCGCATCCCCGCCCCTGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp GGAGTTTCTCCGCCGACCGGCATCTTTGGGGCCTTTGTGGGAGGCTaGCTCGGCCTGGCTGGGTGTCTTGGGCAGAGTGTGGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GVSPPTGIFGAFVGG*LGLAGCLGQSVALP
Trigger: GGGGAGGGCCACACTCTGCCCAAGACACCCAGCCAGGCCGAGCCAGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGCGGAGAAACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS-3UTR CAA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCCCCGTGCTGGGGCCCTaGCTTGTTGCCGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSPVLGP*LVAEGV
Trigger: CACTCCTTCGGCAACAAGCAAGGGCCCCAGCACGGG...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS CCA 90 bp GGTGGTAGGGAGTTTCTCCGCCGACCGGCATCTTTGGGGCCTTTGTaGGAGGCTGGCTCGGCCTGGCTGGGTGTCTTGGGCAGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: GGREFLRRPASLGPL*EAGSAWLGVLGRVW
Trigger: CCACACTCTGCCCAAGACACCCAGCCAGGCCGAGCCAGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGCGGAGAAACTCCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp TCTGGTGGGAGGGTGGTAGGGAGTTTCTCCGCCGACCGGCATCTTTaGGGCCTTTGTGGGAGGCTGGCTCGGCCTGGCTGGGTGTCTTGG +
Preference number: 5 (lower is better)
Translates to: SGGRVVGSFSADRHL*GLCGRLARPGWVSW
Trigger: CCAAGACACCCAGCCAGGCCGAGCCAGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGCGGAGAAACTCCCTACCACCCTCCCACCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACGCCGACCGGCATCTTaGGGGCCTTTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGRRPAS*GPLWEA
Trigger: AGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGCG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCACTCCAGGGCAGGGTaGGGACCTGTAGCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: KKPEDHRAPGCAACRARSHSRAG*GPVASG
Trigger: CCCAGACGCTACAGGTCCCAACCCTGCCCTGGAGTG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGCCTGGCTGGGTGTCTaGGGCAGAGTGTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: GCGKGFLSASVLPTWARGAWLGV*GRVWPS
Trigger: GGAGGGCCACACTCTGCCCAAGACACCCAGCCAGGC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGCACTCCAGGGCAGGGTaGGGACCTGTAGCGTCTGGG +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQHSRAG*GPVASG
Trigger: CCCAGACGCTACAGGTCCCAACCCTGCCCTGGAGTG...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGCACGGTCATCCGGTTaGGGTGGGAGGACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GCGQLPPSPTPPQWKKPEARSSG*GGRTAA
Trigger: TGCTGCCGTCCTCCCACCCAAACCGGATGACCGTGC...CTCTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTGGCCTGCAGGATCTCCTGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGACTCAGCAGGTCAGGGTaGGTGATGCTGATGGGCACG +
Preference number: 5 (lower is better)
Translates to: LACRISCLTWSSRRRRRRLSRSG*VMLMGT
Trigger: CGTGCCCATCAGCATCACCAACCCTGACCTGCTGAG...TCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGACGTTCCCTTCAGAGTaGGGTGAGGCCTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGTFPSE*GEAFLQ
Trigger: TTGCAGGAAGGCCTCACCCAACTCTGAAGGGAACGT...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCCGCCCCACCTTCATTaGCCAGGACTGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGPPHLH*PGLSLA
Trigger: AGCCAGTGACAGTCCTGGCAAATGAAGGTGGGGCGG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS CCA 90 bp GCTGGCCCTGGGGCCTGGCTGAGGAGGACAGGCCATTGGTATCTGTaGCCTCCAGACCTTGTGTCCCAGTCCCGTTGGCTTGAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AGPGAWLRRTGHWYL*PPDLVSQSRWLEAL
Trigger: CAGAGCTTCAAGCCAACGGGACTGGGACACAAGGTCTGGAGGCCACAGATACCAATGGCCTGTCCTCCTCAGCCAGGCCCCAGGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGACGCACGCTGGTGTTATaGAACGCCACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGRTLVL*NATSSS
Trigger: CGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGCG...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCCCGTGCTGGGGCCCTaGCTTGTTGCCGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMPVLGP*LVAEGV
Trigger: CACTCCTTCGGCAACAAGCAAGGGCCCCAGCACGGG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGATCCCGGTTGAAGTCCTaGACGGCCTGGGCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGSRLKS*TAWAVL
Trigger: CAAAACCGCCCAGGCCGTCAAGGACTTCAACCGGGA...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS TCA 90 bp GTCTTCTTTGGAGGGGGAGCCAGCTTGCTGGCCCTGGGGCCTGGCTaGGGAGGACAGGCCATTGGTATCTGTGGCCTCCAGACCTTGTGT +
Preference number: 5 (lower is better)
Translates to: VFFGGGASLLALGPG*GGQAIGICGLQTLC
Trigger: ACACAAGGTCTGGAGGCCACAGATACCAATGGCCTGTCCTCCTCAGCCAGGCCCCAGGGCCAGCAAGCTGGCTCCCCCTCCAAAGAAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS TCA 90 bp CTTCGCGATCAGGGAAACAGATCTTGCACTTGGCAGGACTCATGTTaGCCACCCCGCAGGCCAATCCCACCGGGCTCCCGCAGGGGTGCA +
Preference number: 5 (lower is better)
Translates to: LRDQGNRSCTWQDSC*PPRRPIPPGSRRGA
Trigger: TGCACCCCTGCGGGAGCCCGGTGGGATTGGCCTGCGGGGTGGTCAACATGAGTCCTGCCAAGTGCAAGATCTGTTTCCCTGATCGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544726.2
CDS GCA 90 bp CAAACCGGATGGCCCGCTCGTTGCGGAACATCTCATAGGCCCACCTaGGGATGGAGCGCATGCACTTCACGGCGGCAATCCCGTTGTTGG +
Preference number: 5 (lower is better)
Translates to: QTGWPARCGTSHRPT*GWSACTSRRQSRCW
Trigger: CCAACAACGGGATTGCCGCCGTGAAGTGCATGCGCTCCATCCGCAGGTGGGCCTATGAGATGTTCCGCAACGAGCGGGCCATCCGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000544726.2
CDS GCA 90 bp GGTCCTCGGGGGTCACCATCACAACAAACCGGATGGCCCGCTCGTTaGGGAACATCTCATAGGCCCACCTGCGGATGGAGCGCATGCACT +
Preference number: 5 (lower is better)
Translates to: GPRGSPSQQTGWPAR*GTSHRPTCGWSACT
Trigger: AGTGCATGCGCTCCATCCGCAGGTGGGCCTATGAGATGTTCCGCAACGAGCGGGCCATCCGGTTTGTTGTGATGGTGACCCCCGAGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000544726.2
CDS GCA 90 bp GACTTTAGAAGGGTCATCGAGCTCCAGCCTGGCCACCACGCAGCCTaGTTCCAGCACGGCACCTGGACGCTTGATGTACTTCACCCGGCC +
Preference number: 5 (lower is better)
Translates to: DFRRVIELQPGHHAA*FQHGTWTLDVLHPA
Trigger: GGCCGGGTGAAGTACATCAAGCGTCCAGGTGCCGTGCTGGAAGCAGGCTGCGTGGTGGCCAGGCTGGAGCTCGATGACCCTTCTAAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS GCA 90 bp ACGGGCGCCACTGTTGGCTGCCACGTAAATTTTGGGAATGCCCTCTaGCCGGGCCATCTCGGATGCCCGCAGGTACAGAAGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TGATVGCHVNFGNAL*PGHLGCPQVQKVLS
Trigger: GGAGAGGACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000536440.2
ENST00000537347.1
ENST00000538526.5
CDS CCA 90 bp GGTGCTGCGTCACTGGAAGAAAGGGGGTTTCTTGGGGGCTTCTGGTaGGAGGGTGGTAGGGAGTTTCTCCGCCGACCGGCATCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GAASLEERGFLGGFW*EGGREFLRRPASLG
Trigger: CCCCAAAGATGCCGGTCGGCGGAGAAACTCCCTACCACCCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCTTCCAGTGACGCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp GTCAGGCCGCTTCCACTCCAGGGCAGGGTTGGGACCTGTAGCGTCTaGGCGACAACGGTGGAGGCGATCTTATCTCCTAAGGCCCACATG +
Preference number: 5 (lower is better)
Translates to: VRPLPLQGRVGTCSV*ATTVEAILSPKAHM
Trigger: CATGTGGGCCTTAGGAGATAAGATCGCCTCCACCGTTGTCGCCCAGACGCTACAGGTCCCAACCCTGCCCTGGAGTGGAAGCGGCCTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGTGTGGCCTCCAGACCTaGTGTCCCAGTCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMCGLQT*CPSPVG
Trigger: GCCAACGGGACTGGGACACAAGGTCTGGAGGCCACA...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGAGGAGGACAGGCCATaGGTATCTGTGGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAEEDRP*VSVASR
Trigger: TCTGGAGGCCACAGATACCAATGGCCTGTCCTCCTC...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGGTGCATCTTGTGGTaGGCACAGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRCILW*AQGTAV
Trigger: GACCGCCGTGCCCTGTGCCAACCACAAGATGCACCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGTCTTAAACCTCATTTaGAAGGCCACCATGCCCACC +
Preference number: 5 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGVLNLI*KATMPT
Trigger: GGTGGGCATGGTGGCCTTCAAAATGAGGTTTAAGAC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGGGTGCCATGATTTCCTaGAAACTGCCGTGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: WVVPFAVVPGVAGRATVRGAMIS*KLPWSK
Trigger: CTTTGACCACGGCAGTTTCAAGGAAATCATGGCACC...CCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGCCTCAGAATCCAGGTaGGCAGGGTCTGCAGGGACT +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQASESR*AGSAGT
Trigger: AGTCCCTGCAGACCCTGCCAACCTGGATTCTGAGGC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGTCCCGGTTGAAGTCCTaGACGGCCTGGGCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQSRLKS*TAWAVL
Trigger: CAAAACCGCCCAGGCCGTCAAGGACTTCAACCGGGA...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCACTCTGTGCTCCCCACTaGGGCAAGAGGAGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPLCAPH*GKRRVH
Trigger: ATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAG...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS TCA 90 bp GGCCCCCAAGCTGGCCCGGCTGCCCTTCCGGGTAGACTCACGAGATaGGCCAGCAACAGAGTCCTCGTCGGAGGAGTAGTCATCAAAAGA +
Preference number: 5 (lower is better)
Translates to: GPQAGPAALPGRLTR*ASNRVLVGGVVIKR
Trigger: TCTTTTGATGACTACTCCTCCGACGAGGACTCTGTTGCTGGCTCATCTCGTGAGTCTACCCGGAAGGGCAGCCGGGCCAGCTTGGGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS TCA 90 bp GAGGACCCAGGGGGTACCGCGTCTGAGCCGCCGGACTTGCCTGCCTaGACATTTCCGGGAAGTCATAGATGTAGGTGGTTCCCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: EDPGGTASEPPDLPA*TFPGSHRCRWFPGS
Trigger: AGACCCTGGGAACCACCTACATCTATGACTTCCCGGAAATGTTCAGGCAGGCAAGTCCGGCGGCTCAGACGCGGTACCCCCTGGGTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534852.1
CDS GCA 90 bp TCTGCTGGGAGGACCCAGGGGGTACCGCGTCTGAGCCGCCGGACTTaGCTGCCTGAACATTTCCGGGAAGTCATAGATGTAGGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: SAGRTQGVPRLSRRT*LPEHFREVIDVGGS
Trigger: GGAACCACCTACATCTATGACTTCCCGGAAATGTTCAGGCAGGCAAGTCCGGCGGCTCAGACGCGGTACCCCCTGGGTCCTCCCAGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534852.1
CDS CCA 90 bp GAGGGTGCTGCGTCACTGGAAGAAAGGGGGTTTCTTGGGGGCTTCTaGTGGGAGGGTGGTAGGGAGTTTCTCCGCCGACCGGCATCTTTG +
Preference number: 5 (lower is better)
Translates to: EGAASLEERGFLGGF*WEGGREFLRRPASL
Trigger: CAAAGATGCCGGTCGGCGGAGAAACTCCCTACCACCCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCTTCCAGTGACGCAGCACCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp TGTGGCCTCCAGACCTTGTGTCCCAGTCCCGTTGGCTTGAAGCTCTaGGGAGGGTGCTGCGTCACTGGAAGAAAGGGGGTTTCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: CGLQTLCPSPVGLKL*GGCCVTGRKGVSWG
Trigger: CCCCCAAGAAACCCCCTTTCTTCCAGTGACGCAGCACCCTCCCCAGAGCTTCAAGCCAACGGGACTGGGACACAAGGTCTGGAGGCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp TCTTGTCTTCTTTGGAGGGGGAGCCAGCTTGCTGGCCCTGGGGCCTaGCTGAGGAGGACAGGCCATTGGTATCTGTGGCCTCCAGACCTT +
Preference number: 5 (lower is better)
Translates to: SCLLWRGSQLAGPGA*LRRTGHWYLWPPDL
Trigger: AAGGTCTGGAGGCCACAGATACCAATGGCCTGTCCTCCTCAGCCAGGCCCCAGGGCCAGCAAGCTGGCTCCCCCTCCAAAGAAGACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp ATGGCCTCTTCCCGGTTCTCTCCCCAGGAGAAGCAGTGCCCAAATTaGGAATCCGCAAACTCGTGCAGGCCTCCAGTAGCGGCCACGCTG +
Preference number: 5 (lower is better)
Translates to: MASSRFSPQEKQCPN*ESANSCRPPVAATL
Trigger: CAGCGTGGCCGCTACTGGAGGCCTGCACGAGTTTGCGGATTCCCAATTTGGGCACTGCTTCTCCTGGGGAGAGAACCGGGAAGAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGACGGCACCTGGACGCTaGATGTACTTCACCCGGCCT +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMTAPGR*MYFTRP
Trigger: AGGCCGGGTGAAGTACATCAAGCGTCCAGGTGCCGT...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAAGCCACTCATGACGTaGGTGAGGTTTTCCAGGACG +
Preference number: 5 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGKPLMT*VRFSRT
Trigger: CGTCCTGGAAAACCTCACCAACGTCATGAGTGGCTT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCACGGTCATCCGGTTaGGGTGGGAGGACGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFARSSG*GGRTAA
Trigger: TGCTGCCGTCCTCCCACCCAAACCGGATGACCGTGC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTCCAGCATCCGGCCGGGTGTGTCATGGAAGTCGGCGAACTGCACCGCCACCTGATGTCTTTGGGATACTaGTCTGGGGAGCCCCACAGT +
Preference number: 5 (lower is better)
Translates to: LQHPAGCVMEVGELHRHLMSLGY*SGEPHS
Trigger: ACTGTGGGGCTCCCCAGACAAGTATCCCAAAGACAT...CAGGTGGCGGTGCAGTTCGCCGACTTCCATGACACACCCGGCCGGATGCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp GGGAGCAGCAGGTCCTCGCGAGCCTTTAGCCGGCCCTCCAGGTCCTTTCGGTCCCGAAAGGTGATGTCATaGCCGATGACGATCACATCC +
Preference number: 5 (lower is better)
Translates to: GSSRSSRAFSRPSRSFRSRKVMS*PMTITS
Trigger: GGATGTGATCGTCATCGGCAATGACATCACCTTTCG...GGACCGAAAGGACCTGGAGGGCCGGCTAAAGGCTCGCGAGGACCTGCTGCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCCTTCCCAGGACCTTGTaGAGAGCACTTGCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: KKPEDHRAPGCAACRARSLPRTL*RALAPV
Trigger: CACAGGAGCAAGTGCTCTCAACAAGGTCCTGGGAAG...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGGGCGGGCCACGGTCAGGGGCTGTGATTATCCTTaGGCATATAGGACAGCCACT +
Preference number: 5 (lower is better)
Translates to: WVVPFAVVPGVAGRATVRGCDYP*AYRTAT
Trigger: AGTGGCTGTCCTATATGCCAAAGGATAATCACAGCC...CCTGACCGTGGCCCGCCCAGCCACTCCCGGGACCACGGCAAAAGGAACCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCACGTTCCCTTCAGAGTaGGGTGAGGCCTTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: KKPEDHRAPGCAACRARSTFPSE*GEAFLQ
Trigger: TTGCAGGAAGGCCTCACCCAACTCTGAAGGGAACGT...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGGCCTCAGAATCCAGGTaGGCAGGGTCTGCAGGGACT +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMASESR*AGSAGT
Trigger: AGTCCCTGCAGACCCTGCCAACCTGGATTCTGAGGC...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAAGGTCCTTTCGGTCCTaGTCGGAGAGATCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGRSFRS*SERSGS
Trigger: GGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS TCA 90 bp CTTGGGCAGAGTGTGGCCCTCCCCATTTCTCTGCGGTGTCTCCCCTaGGTTATCAGAGGCTGGAAAGGGCTCCTGGCTCGGGATGAGGTT +
Preference number: 5 (lower is better)
Translates to: LGQSVALPISLRCLP*VIRGWKGLLARDEV
Trigger: AACCTCATCCCGAGCCAGGAGCCCTTTCCAGCCTCTGATAACTCAGGGGAGACACCGCAGAGAAATGGGGAGGGCCACACTCTGCCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS TCA 90 bp GACTCTGAGCTGAGACGGCTCTCTCTGAAGCTGCCCCCTGGGCTCTaGGAAGTGTACCTGCTCCATGAACTCGAATATGGCCAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: DSELRRLSLKLPPGL*EVYLLHELEYGQRG
Trigger: GCCCCGCTGGCCATATTCGAGTTCATGGAGCAGGTACACTTCTCAGAGCCCAGGGGGCAGCTTCAGAGAGAGCCGTCTCAGCTCAGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000543080.1
CDS GCA 90 bp CTGTGGAAGACCTGGTGCAGTTTCTCTCCGAGGATGGGCAGTGTCTaGTGGGCAGGGAGTTCTCCTGTGAACGGTTCAGCCGGGTGGACT +
Preference number: 5 (lower is better)
Translates to: LWKTWCSFSPRMGSV*WAGSSPVNGSAGWT
Trigger: AGTCCACCCGGCTGAACCGTTCACAGGAGAACTCCCTGCCCAGCAGACACTGCCCATCCTCGGAGAGAAACTGCACCAGGTCTTCCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp GGCCATTGGTATCTGTGGCCTCCAGACCTTGTGTCCCAGTCCCGTTaGCTTGAAGCTCTGGGGAGGGTGCTGCGTCACTGGAAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: GHWYLWPPDLVSQSR*LEALGRVLRHWKKG
Trigger: CCCTTTCTTCCAGTGACGCAGCACCCTCCCCAGAGCTTCAAGCCAACGGGACTGGGACACAAGGTCTGGAGGCCACAGATACCAATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS CCA 90 bp ATGAAGAAGACCTCTCGATCAGCCTTCCGCTGCAGGGTGGCTGCATaGCAGTCCAGGATGGTGGCTATCTGCTGGCTGGGGAACTGGCAC +
Preference number: 5 (lower is better)
Translates to: MKKTSRSAFRCRVAA*QSRMVAICWLGNWH
Trigger: GTGCCAGTTCCCCAGCCAGCAGATAGCCACCATCCTGGACTGCCATGCAGCCACCCTGCAGCGGAAGGCTGATCGAGAGGTCTTCTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp CCGCGGATCCCGCTGCGGTATCTCTGGACCAACTGCACGATGCTCTaGGTGTTGATGAAGAAGACCTCTCGATCAGCCTTCCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: PRIPLRYLWTNCTML*VLMKKTSRSAFRCR
Trigger: CCTGCAGCGGAAGGCTGATCGAGAGGTCTTCTTCATCAACACCCAGAGCATCGTGCAGTTGGTCCAGAGATACCGCAGCGGGATCCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp CTCGAATCTCCTGAAGGCTACCATGGCTCCCATGCGCTGGCACAGTaGGGAGAAGCCGCTGTCCATGAAGAGCTCTGTGCTGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: LESPEGYHGSHALAQ*GEAAVHEELCAVPQ
Trigger: CTGAGGCACAGCACAGAGCTCTTCATGGACAGCGGCTTCTCCCCACTGTGCCAGCGCATGGGAGCCATGGTAGCCTTCAGGAGATTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000538526.5
CDS-3UTR CAA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACGCCTGGCTGGGTGTCTaGGGCAGAGTGTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: CLEEALLGLLLRRVSARNAWLGV*GRVWPS
Trigger: GGAGGGCCACACTCTGCCCAAGACACCCAGCCAGGC...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAAAGAAAGGGGGTTTCTaGGGGGCTTCTGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: GCGKGFLSASVLPTWARGKKGGF*GASGGR
Trigger: CCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCTT...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGGCGGCAATCCCGTTGTaGGCAATAAGCACCTTCTCG +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQAAIPL*AISTFS
Trigger: CGAGAAGGTGCTTATTGCCAACAACGGGATTGCCGC...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAACGGCGGCAATCCCGTaGTTGGCAATAAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPTAAIP*LAISTF
Trigger: GAAGGTGCTTATTGCCAACAACGGGATTGCCGCCGT...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGACCGGTGTCGATGTCGTaGTTCTGGAAGCTCTCGGTC +
Preference number: 5 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRPVSMS*FWKLSV
Trigger: GACCGAGAGCTTCCAGAACAACGACATCGACACCGG...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCACCAGCTGGTTCTTCTaGGCCACCTGTGCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSATSWFF*ATCAWE
Trigger: CTCCCACGCACAGGTGGCCAAGAAGAACCAGCTGGT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGAGTGTCTTTGGGCACGTaGGCGAAGCAAGAGATGACT +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGVSLGT*AKQEMT
Trigger: AGTCATCTCTTGCTTCGCCAACGTGCCCAAAGACAC...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCATGGGCCTGGAATCGCTaGGCCTGGAGCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPWAWNR*AWSRSL
Trigger: CAAGGATCTGCTCCAGGCCAAGCGATTCCAGGCCCA...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTCAGCTGGGCTGATGTGCTGGCTCAGGTATATCACACAGTCCACGGCCACCTCTCCCGGTTGAAGTCCTaGACGGCCTGGGCGGTTTTG +
Preference number: 5 (lower is better)
Translates to: LSWADVLAQVYHTVHGHLSRLKS*TAWAVL
Trigger: CAAAACCGCCCAGGCCGTCAAGGACTTCAACCGGGA...GAGGTGGCCGTGGACTGTGTGATATACCTGAGCCAGCACATCAGCCCAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCATCAGGATGGGCTGTTaGTATTGTCTAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGIRMGC*YCLRPS
Trigger: GGACGGCCTTAGACAATACAAACAGCCCATCCTGAT...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp CTGGTCCTCCAGGAGGAGGCGGCGCAGACGCCAATACAGGAAGGTGCGTGCGGTATCAGGATGGGCTGTTaGTATTGTCTAAGGCCGTCC +
Preference number: 5 (lower is better)
Translates to: LVLQEEAAQTPIQEGACGIRMGC*YCLRPS
Trigger: GGACGGCCTTAGACAATACAAACAGCCCATCCTGAT...ACCGCACGCACCTTCCTGTATTGGCGTCTGCGCCGCCTCCTCCTGGAGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp TGCCCCTCGGGGTCAGATCCCACCATCGGTGCTCATCAAGCCAGCAGGCGAGGATCTATGCACAGCGGGTaGATGGTGGCATCTATGACC +
Preference number: 5 (lower is better)
Translates to: CPSGSDPTIGAHQASRRGSMHSG*MVASMT
Trigger: GGTCATAGATGCCACCATCAACCCGCTGTGCATAGA...TCCTCGCCTGCTGGCTTGATGAGCACCGATGGTGGGATCTGACCCCGAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTTCTATGCACAGCGGGTaGATGGTGGCATCTATGACC +
Preference number: 5 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVASMHSG*MVASMT
Trigger: GGTCATAGATGCCACCATCAACCCGCTGTGCATAGA...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGGCCTCGGATGGTCTaGAGGACAGAGTCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCRPRMV*RTESCF
Trigger: GAAGCACGACTCTGTCCTCAAGACCATCCGAGGCCT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTCAGTCCTCATTTTCCTaGGAGAGAAGAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAQSSFS*ERRGGQ
Trigger: CTGCCCACCTCTTCTCTCCAAGGAAAATGAGGACTG...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCCTCTGTGCTCCCCACTaGGGCAAGAGGAGGGTGCAT +
Preference number: 5 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSLCAPH*GKRRVH
Trigger: ATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAG...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCCAAGCATCCCAGCTTTaGGAGGCTTCCCTGGGCAAC +
Preference number: 5 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCQASQL*EASLGN
Trigger: GTTGCCCAGGGAAGCCTCCAAAAGCTGGGATGCTTG...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS TCA 90 bp TGCCGGGCTCTGAGGGCCACTTTGCAGTGCTCGCTTTTGCTCAGCTaGGTGAGCTCGTTGAGGATGGAGATCAGCTCGTCCGACAGGGAA +
Preference number: 5 (lower is better)
Translates to: CRALRATLQCSLLLS*VSSLRMEISSSDRE
Trigger: TTCCCTGTCGGACGAGCTGATCTCCATCCTCAACGAGCTCACTCAGCTGAGCAAAAGCGAGCACTGCAAAGTGGCCCTCAGAGCCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp CCACTCATGACGTTGGTGAGGTTTTCCAGGACGCTGTGGAAGACCTaGTGCAGTTTCTCTCCGAGGATGGGCAGTGTCTGCTGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: PLMTLVRFSRTLWKT*CSFSPRMGSVCWAG
Trigger: CCCTGCCCAGCAGACACTGCCCATCCTCGGAGAGAAACTGCACCAGGTCTTCCACAGCGTCCTGGAAAACCTCACCAACGTCATGAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp GTGAAGTCCTCGAATCTCCTGAAGGCTACCATGGCTCCCATGCGCTaGCACAGTGGGGAGAAGCCGCTGTCCATGAAGAGCTCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VKSSNLLKATMAPMR*HSGEKPLSMKSSVL
Trigger: CAGCACAGAGCTCTTCATGGACAGCGGCTTCTCCCCACTGTGCCAGCGCATGGGAGCCATGGTAGCCTTCAGGAGATTCGAGGACTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000538526.5
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCTCTTGGTGATCGGCTaGGAGTCCGTCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMLLVIG*ESVIFP
Trigger: GGGGAAAATGACGGACTCCAAGCCGATCACCAAGAG...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACCCAGTCCCGTTGGCTaGAAGCTCTGGGGAGGGTGC +
Preference number: 5 (lower is better)
Translates to: MREHPPEALKPPAGYFHSPSPVG*KLWGGC
Trigger: GCACCCTCCCCAGAGCTTCAAGCCAACGGGACTGGG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCATGCAGGTCCAGCTTCTaGTGTTCCCGTCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPCRSSF*CSRPLF
Trigger: GAAGAGGGGACGGGAACACAAGAAGCTGGACCTGCA...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAAGCACCGAGGTGATGTaGCTGGCATACTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPSTEVM*LAYWAI
Trigger: GATGGCCCAGTATGCCAGCAACATCACCTCGGTGCT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GTTCTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACACCAGCTGGTTCTTCTaGGCCACCTGTGCGTGGGAG +
Preference number: 5 (lower is better)
Translates to: VLPEQIGMVTTVQSSVTDTSWFF*ATCAWE
Trigger: CTCCCACGCACAGGTGGCCAAGAAGAACCAGCTGGT...GTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCGCTCTGAGGGCCACTTaGCAGTGCTCGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAALRAT*QCSLLL
Trigger: GAGCAAAAGCGAGCACTGCAAAGTGGCCCTCAGAGC...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGCGCAGGCTGGGGGGAAAGTATTAATTTCTaGAGGTTCTCGGGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PPLCSPLGQEEGACAGWGESINF*RFSGQN
Trigger: GTTCTGCCCCGAGAACCTCAAGAAATTAATACTTTC...CCCCCAGCCTGCGCATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AAGAAACCAGAGGATCACAGGGCCCCAGGCTGTGCCGCCTGCAGAGCCAGGAGCTCTTCTCTGAGGCTCTaGCAGTCATCCTCGGAGTAT +
Preference number: 5 (lower is better)
Translates to: KKPEDHRAPGCAACRARSSSLRL*QSSSEY
Trigger: ATACTCCGAGGATGACTGCAAGAGCCTCAGAGAAGA...GCTCCTGGCTCTGCAGGCGGCACAGCCTGGGGCCCTGTGATCCTCTGGTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCAGGTGCATCTTGTGGTaGGCACAGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: RSFRSLSERSGSPSCSMSRCILW*AQGTAV
Trigger: GACCGCCGTGCCCTGTGCCAACCACAAGATGCACCT...GCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTCGCACGCTGGTGTTATaGAACGCCACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFRTLVL*NATSSS
Trigger: CGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGCG...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGATGTCTTTGGGATACTaGTCTGGGGAGCCCCACAGT +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQMSLGY*SGEPHS
Trigger: ACTGTGGGGCTCCCCAGACAAGTATCCCAAAGACAT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTGGCCTGCAGGATCTCCTGCTTGACCTGGTCCTCCAGGAGGAGGCGGCGCAGAAGGTATTTAAATCCTTaGTGGGGGTCTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: LACRISCLTWSSRRRRRRRYLNP*WGSSGS
Trigger: GGACCCAGAAGACCCCCACAAAGGATTTAAATACCT...TCTGCGCCGCCTCCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGAGAACCCCCTCCAGTaGGCAAAGATCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPENPLQ*AKIIRG
Trigger: GCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCTC...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCAGGCCTCGGATGGTCTaGAGGACAGAGTCGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSARPRMV*RTESCF
Trigger: GAAGCACGACTCTGTCCTCAAGACCATCCGAGGCCT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp TGGACAAACCACCCATCAGAGCAGTGGGTTGTGGCCAGCTCCCTCCATCCCCGAGCACTCCTGGGCCTTTaGTTAAGACGGGTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: WTNHPSEQWVVASSLHPRALLGL*LRRVSA
Trigger: AGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC...TCGGGGATGGAGGGAGCTGGCCACAACCCACTGCTCTGATGGGTGGTTTGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCTGAGAGGAGGCTGTTTTaGTTTGGAAGAGGCACTCCT +
Preference number: 5 (lower is better)
Translates to: VYGWWVWVVPFAVVPGVAERRLF*FGRGTP
Trigger: AGGAGTGCCTCTTCCAAACAAAAACAGCCTCCTCTC...AGCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGATGCCAGGCACTGTTTaGCAAAAGGAAACAGGGATG +
Preference number: 5 (lower is better)
Translates to: AEGVRVVGLGGSFCRGPGMPGTV*QKETGM
Trigger: CATCCCTGTTTCCTTTTGCAAAACAGTGCCTGGCAT...CCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS TCA 90 bp TTGGTATCTGTGGCCTCCAGACCTTGTGTCCCAGTCCCGTTGGCTTaGAGCTCTGGGGAGGGTGCTGCGTCACTGGAAGAAAGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: LVSVASRPCVPVPLA*SSGEGAASLEERGF
Trigger: AAACCCCCTTTCTTCCAGTGACGCAGCACCCTCCCCAGAGCTTCAAGCCAACGGGACTGGGACACAAGGTCTGGAGGCCACAGATACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000539864.1
CDS GCA 90 bp CTCATGACGTTGGTGAGGTTTTCCAGGACGCTGTGGAAGACCTGGTaGAGTTTCTCTCCGAGGATGGGCAGTGTCTGCTGGGCAGGGAGT +
Preference number: 5 (lower is better)
Translates to: LMTLVRFSRTLWKTW*SFSPRMGSVCWAGS
Trigger: ACTCCCTGCCCAGCAGACACTGCCCATCCTCGGAGAGAAACTGCACCAGGTCTTCCACAGCGTCCTGGAAAACCTCACCAACGTCATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS GCA 90 bp ATGCTCTGGGTGTTGATGAAGAAGACCTCTCGATCAGCCTTCCGCTaGAGGGTGGCTGCATGGCAGTCCAGGATGGTGGCTATCTGCTGG +
Preference number: 5 (lower is better)
Translates to: MLWVLMKKTSRSAFR*RVAAWQSRMVAICW
Trigger: CCAGCAGATAGCCACCATCCTGGACTGCCATGCAGCCACCCTGCAGCGGAAGGCTGATCGAGAGGTCTTCTTCATCAACACCCAGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS GCA 90 bp TGCCACGTAAATTTTGGGAATGCCCTCTGCCCGGGCCATCTCGGATaGCCGCAGGTACAGAAGGTCCTCTCCAGGGCCAAAGGATCCAAT +
Preference number: 5 (lower is better)
Translates to: CHVNFGNALCPGHLG*PQVQKVLSRAKGSN
Trigger: ATTGGATCCTTTGGCCCTGGAGAGGACCTTCTGTACCTGCGGGCATCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000536440.2
ENST00000537347.1
ENST00000538526.5
CDS GCA 90 bp GTGTTTGATCTCCTCTGCCATGCCAATACGGGCGCCACTGTTGGCTaGCACGTAAATTTTGGGAATGCCCTCTGCCCGGGCCATCTCGGA +
Preference number: 5 (lower is better)
Translates to: VFDLLCHANTGATVG*HVNFGNALCPGHLG
Trigger: TCCGAGATGGCCCGGGCAGAGGGCATTCCCAAAATTTACGTGGCAGCCAACAGTGGCGCCCGTATTGGCATGGCAGAGGAGATCAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000536440.2
ENST00000538526.5
CDS CCA 90 bp GGTGAGGCCTTCCTGCAAGCATCCACCGGGGGTCGTAGGGAGCTCTaGATGGGAGGAATTCAATTTCTCTGTCAATGGGGTCAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: GEAFLQASTGGRREL*MGGIQFLCQWGQWV
Trigger: CACCCACTGACCCCATTGACAGAGAAATTGAATTCCTCCCATCCAGAGCTCCCTACGACCCCCGGTGGATGCTTGCAGGAAGGCCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000538526.5
CDS-3UTR CAA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCCTGCCGCTTTTCTCTaGCCATGTCCTCCCCACCGT +
Preference number: 5 (lower is better)
Translates to: LEEALLGLLLRRVSARNQPAAFL*PCPPHR
Trigger: ACGGTGGGGAGGACATGGCAAGAGAAAAGCGGCAGG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338432.11
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCACTCTTGGTGATCGGCTaGGAGTCCGTCATTTTCCCC +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPLLVIG*ESVIFP
Trigger: GGGGAAAATGACGGACTCCAAGCCGATCACCAAGAG...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGAAGCAGTGCCCAAATaGGGAATCCGCAAACTCGTG +
Preference number: 5 (lower is better)
Translates to: GCGKGFLSASVLPTWARGEAVPK*GIRKLV
Trigger: CACGAGTTTGCGGATTCCCAATTTGGGCACTGCTTC...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAAGGTGCATCTTGTGGTaGGCACAGGGCACGGCGGTC +
Preference number: 5 (lower is better)
Translates to: MREHPPEALKPPAGYFHSRCILW*AQGTAV
Trigger: GACCGCCGTGCCCTGTGCCAACCACAAGATGCACCT...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCGCACGCTGGTGTTATaGAACGCCACCTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LEEALLGLLLRRVSARNQRTLVL*NATSSS
Trigger: CGAGCTGGAGGTGGCGTTCAATAACACCAGCGTGCG...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCACGGACTCCTCGATCTaGAAGGGGTCCATGATGACA +
Preference number: 5 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCTDSSI*KGSMMT
Trigger: TGTCATCATGGACCCCTTCAAGATCGAGGAGTCCGT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGTGGGCCTGGAATCGCTaGGCCTGGAGCAGATCCTTG +
Preference number: 5 (lower is better)
Translates to: LEEALLGLLLRRVSARNQWAWNR*AWSRSL
Trigger: CAAGGATCTGCTCCAGGCCAAGCGATTCCAGGCCCA...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp AAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGAGGGTGCATGATGTCTTTGGGATACTaGTCTGGGGAGCCCCACAGT +
Preference number: 5 (lower is better)
Translates to: KGFLSASVLPTWARGGCMMSLGY*SGEPHS
Trigger: ACTGTGGGGCTCCCCAGACAAGTATCCCAAAGACAT...CATGCACCCTCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCTTCCCAGGACCTTGTaGAGAGCACTTGCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSALPRTL*RALAPV
Trigger: CACAGGAGCAAGTGCTCTCAACAAGGTCCTGGGAAG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp AGGTCCTTTCGGTCCTTGTCGGAGAGATCAGGTTCCCCTAGCTGTTCCATGAGCTGCAGGATCTCCTGCTaGACCTGGTCCTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RSFRSLSERSGSPSCSMSCRISC*TWSSRR
Trigger: CCTCCTGGAGGACCAGGTCAAGCAGGAGATCCTGCA...GCTCATGGAACAGCTAGGGGAACCTGATCTCTCCGACAAGGACCGAAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538526.5
CDS TCA 90 bp GACGATCTCTTCGTAAGCCAGAGAGGACTCCCCAGCAATCATGCCTaGGCCCCTCAGATTCTCCACGCCCAAGCCATCATCCTTCCCGAT +
Preference number: 5 (lower is better)
Translates to: DDLFVSQRGLPSNHA*APQILHAQAIILPD
Trigger: ATCGGGAAGGATGATGGCTTGGGCGTGGAGAATCTGAGGGGCTCAGGCATGATTGCTGGGGAGTCCTCTCTGGCTTACGAAGAGATCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000396233.4
ENST00000536440.2
ENST00000538526.5
CDS GCA 90 bp ATGTTCGAAATGGCCTCTTCCCGGTTCTCTCCCCAGGAGAAGCAGTaGCCAAATTGGGAATCCGCAAACTCGTGCAGGCCTCCAGTAGCG +
Preference number: 5 (lower is better)
Translates to: MFEMASSRFSPQEKQ*PNWESANSCRPPVA
Trigger: CGCTACTGGAGGCCTGCACGAGTTTGCGGATTCCCAATTTGGGCACTGCTTCTCCTGGGGAGAGAACCGGGAAGAGGCCATTTCGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
CDS CCA 90 bp CTTCCCAGGACCTTGTTGAGAGCACTTGCTCCTGTGAGGATGATGTaGGAATTCTCCACCTGGATCACTCGCTGGCCCAGCCTCACCAAG +
Preference number: 5 (lower is better)
Translates to: LPRTLLRALAPVRMM*EFSTWITRWPSLTK
Trigger: CTTGGTGAGGCTGGGCCAGCGAGTGATCCAGGTGGAGAATTCCCACATCATCCTCACAGGAGCAAGTGCTCTCAACAAGGTCCTGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000377854.9
ENST00000396233.4
ENST00000538526.5
CDS-3UTR CAA 90 bp AGTTTATTCTGCACATTTCCTAGTAGGCTCTCTGCCCACCGTTCCAGGGTAGCACGCCGACCGGCATCTTaGGGGCCTTTGTGGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SLFCTFPSRLSAHRSRVARRPAS*GPLWEA
Trigger: AGCCTCCCACAAAGGCCCCAAAGATGCCGGTCGGCG...TGCTACCCTGGAACGGTGGGCAGAGAGCCTACTAGGAAATGTGCAGAATAAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGAAGAAAGGGGGTTTCTaGGGGGCTTCTGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LEEALLGLLLRRVSARNQKKGGF*GASGGR
Trigger: CCTCCCACCAGAAGCCCCCAAGAAACCCCCTTTCTT...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TTGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAATGTGGCCTCCAGACCTaGTGTCCCAGTCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: LFGRGTPGPFVKTGVSSECGLQT*CPSPVG
Trigger: GCCAACGGGACTGGGACACAAGGTCTGGAGGCCACA...TTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGCCGTGGTCCCGGGAGTGGCCCACCTTCAGAAGCTTaGATCATCAATGGAAAACCA +
Preference number: 5 (lower is better)
Translates to: GVRVVGLGGSFCRGPGSGPPSEA*IINGKP
Trigger: TGGTTTTCCATTGATGATCAAAGCTTCTGAAGGTGG...GCCACTCCCGGGACCACGGCAAAAGGAACCACCCAGACCCACCACCCGTACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGGTGTGGTAAGGGATTCCTCTCCGCCTCTGTGCTCCCCACTTGGGCAAGAGGACTTGTCGTAGTGGGCTaGCTGAAAATGGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: GCGKGFLSASVLPTWARGLVVVG*LKMVLN
Trigger: GTTGAGCACCATTTTCAGCAAGCCCACTACGACAAG...TCCTCTTGCCCAAGTGGGGAGCACAGAGGCGGAGAGGAATCCCTTACCACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTGGGACATGTCTGGCTaGAACTGCTCCCTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSWDMSG*NCSLRF
Trigger: AAACCTCAGGGAGCAGTTCAAGCCAGACATGTCCCA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCACGGACTCCTCGATCTaGAAGGGGTCCATGATGACA +
Preference number: 5 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSTDSSI*KGSMMT
Trigger: TGTCATCATGGACCCCTTCAAGATCGAGGAGTCCGT...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTGGCGGATGTTGATCTaGACCTCAGCCTGTAGCACA +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSAWRMLI*TSACST
Trigger: TGTGCTACAGGCTGAGGTCAAGATCAACATCCGCCA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp CTCCCTGAGCAAATCGGCATGGTCACCACAGTCCAGTCCTCAGTCACCGACAGCTGGCGGATGTTGATCTaGACCTCAGCCTGTAGCACA +
Preference number: 5 (lower is better)
Translates to: LPEQIGMVTTVQSSVTDSWRMLI*TSACST
Trigger: TGTGCTACAGGCTGAGGTCAAGATCAACATCCGCCA...GCTGTCGGTGACTGAGGACTGGACTGTGGTGACCATGCCGATTTGCTCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCACGTGGAACATGTGTTaGATCTCCTCTGCCATGCCA +
Preference number: 5 (lower is better)
Translates to: ALLGLLLRRVSARNQQPCTWNMC*ISSAMP
Trigger: TGGCATGGCAGAGGAGATCAAACACATGTTCCACGT...GCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp TGGGTTGTGGCCAGCTCCCTCCATCCCCGACTCCGCCCCAATGGAAGAAACCAGAGGTATTTAAATCCTTaGTGGGGGTCTTCTGGGTCC +
Preference number: 5 (lower is better)
Translates to: WVVASSLHPRLRPNGRNQRYLNP*WGSSGS
Trigger: GGACCCAGAAGACCCCCACAAAGGATTTAAATACCT...CTGGTTTCTTCCATTGGGGCGGAGTCGGGGATGGAGGGAGCTGGCCACAACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTGGCAACTTCTCCCGGTaGAAGTCCTTGACGGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARASSRSPETSSWVLPFIGNFSR*KSLTAW
Trigger: CCAGGCCGTCAAGGACTTCAACCGGGAGAAGTTGCC...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGGAGAACCCCCTCCAGTaGGCAAAGATCATCAGGGGC +
Preference number: 5 (lower is better)
Translates to: LEEALLGLLLRRVSARNQENPLQ*AKIIRG
Trigger: GCCCCTGATGATCTTTGCCAACTGGAGGGGGTTCTC...CTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338432.11
ENST00000377848.7
ENST00000538526.5
CDS-3UTR CAA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGGAGGCTGTTTTTGTTaGGAAGAGGCACTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFGGCFC*EEALLG
Trigger: GCCCAGGAGTGCCTCTTCCAAACAAAAACAGCCTCC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCACCGCCCCACCTTCATTaGCCAGGACTGTCACTGGCT +
Preference number: 5 (lower is better)
Translates to: MREHPPEALKPPAGYFHSPPHLH*PGLSLA
Trigger: AGCCAGTGACAGTCCTGGCAAATGAAGGTGGGGCGG...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGAGGAGGACAGGCCATaGGTATCTGTGGCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: MREHPPEALKPPAGYFHSEEDRP*VSVASR
Trigger: TCTGGAGGCCACAGATACCAATGGCCTGTCCTCCTC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp TGTTTGGAAGAGGCACTCCTGGGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACTGCAGGTCCAGCTTCTaGTGTTCCCGTCCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: CLEEALLGLLLRRVSARNCRSSF*CSRPLF
Trigger: GAAGAGGGGACGGGAACACAAGAAGCTGGACCTGCA...GTTCCGAGCTGACACCCGTCTTAACAAAAGGCCCAGGAGTGCCTCTTCCAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCAGAGGACCTCGAGCTATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAAAAGCAACTCCATTCTaGCACAGCAGCTCCGGAAGT +
Preference number: 5 (lower is better)
Translates to: GRGPRAMREHPPEALKPPKATPF*HSSSGS
Trigger: ACTTCCGGAGCTGCTGTGCAAGAATGGAGTTGCTTT...TGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCATAGCTCGAGGTCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ACAGTCCAGTCCTCAGTCACCGACAGCTCTGCCCCTCGGGGTCAGATCCCACCAGATCTCACTCTGTACTaGTCTGAAAAGGATCGGGAA +
Preference number: 5 (lower is better)
Translates to: TVQSSVTDSSAPRGQIPPDLTLY*SEKDRE
Trigger: TTCCCGATCCTTTTCAGACAAGTACAGAGTGAGATC...TGGTGGGATCTGACCCCGAGGGGCAGAGCTGTCGGTGACTGAGGACTGGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp AGTCTTCAGGGTCTGCTGAGGGTGTACGGGTGGTGGGTCTGGGTGGTTCCTTTTGAAGCAGTGCCCAAATaGGGAATCCGCAAACTCGTG +
Preference number: 5 (lower is better)
Translates to: SLQGLLRVYGWWVWVVPFEAVPK*GIRKLV
Trigger: CACGAGTTTGCGGATTCCCAATTTGGGCACTGCTTC...AAAAGGAACCACCCAGACCCACCACCCGTACACCCTCAGCAGACCCTGAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCATTAGCACCGAGGTGATGTaGCTGGCATACTGGGCCATC +
Preference number: 5 (lower is better)
Translates to: ARASSRSPETSSWVLPFISTEVM*LAYWAI
Trigger: GATGGCCCAGTATGCCAGCAACATCACCTCGGTGCT...AATGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCACGATGCTCTGGGTGTaGATGAAGAAGACCTCTCGA +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSATMLWV*MKKTSR
Trigger: TCGAGAGGTCTTCTTCATCAACACCCAGAGCATCGT...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCCTTGTCGTAGTGGGCTaGCTGAAAATGGTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSALVVVG*LKMVLN
Trigger: GTTGAGCACCATTTTCAGCAAGCCCACTACGACAAG...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp ATGCGAGAGCATCCTCCAGAAGCCCTGAAACCTCCAGCTGGGTACTTCCATTCAGCTCTGAGGGCCACTTaGCAGTGCTCGCTTTTGCTC +
Preference number: 5 (lower is better)
Translates to: MREHPPEALKPPAGYFHSALRAT*QCSLLL
Trigger: GAGCAAAAGCGAGCACTGCAAAGTGGCCCTCAGAGC...TGAATGGAAGTACCCAGCTGGAGGTTTCAGGGCTTCTGGAGGATGCTCTCGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338432.11
ENST00000377848.7
CDS-3UTR CAA 90 bp GGCCTTTTGTTAAGACGGGTGTCAGCTCGGAACCAGCAGCCCTGCAGAAGTGCCTCTTCTCTGAGGCTCTaGCAGTCATCCTCGGAGTAT +
Preference number: 5 (lower is better)
Translates to: GLLLRRVSARNQQPCRSASSLRL*QSSSEY
Trigger: ATACTCCGAGGATGACTGCAAGAGCCTCAGAGAAGA...GGCACTTCTGCAGGGCTGCTGGTTCCGAGCTGACACCCGTCTTAACAAAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338432.11