RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACAA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000060971

Ensembl transcript IDs: ENST00000301810.11, ENST00000333167.13, ENST00000411549.5, ENST00000418880.1, ENST00000421218.1, ENST00000440176.5, ENST00000447223.5, ENST00000450296.5, ENST00000451419.1, ENST00000452171.5, ENST00000460424.5, ENST00000465181.1, ENST00000469559.5, ENST00000469600.1, ENST00000480865.5, ENST00000484284.5, ENST00000489559.1, ENST00000625927.3

Found 877 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGACCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGATGGCAGCTGCCCCATCACTCACCT +
Preference number: 1 (lower is better)
Translates to: KTSGPQGWEGPTLLP*TSGPAGWQLPHHSP
Trigger: AGGTGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR GCA 90 bp TGCATAAGACCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGCCCCATCACT +
Preference number: 1 (lower is better)
Translates to: CIRPQDPKDGKAQLF*LGPPGQQDGSCPIT
Trigger: AGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGGTCTTATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR GCA 90 bp GCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCTAGAGTTTCCAGCTGTGGTAGAACC +
Preference number: 1 (lower is better)
Translates to: AQLFCLGPPGQQDGS*PITHLARVSSCGRT
Trigger: GGTTCTACCACAGCTGGAAACTCTAGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625927.3
3UTR CCA 90 bp TTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACC +
Preference number: 1 (lower is better)
Translates to: LARPSMVVLGRIPSS*VTVMLLLVPLSSWT
Trigger: GGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR GCA 90 bp TCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATaGACATGGACACCACTCCGTATGCCCTCTTCCCACGGCGCTTCA +
Preference number: 1 (lower is better)
Translates to: SQGIQRRQRLPFQSR*TWTPLRMPSSHGAS
Trigger: TGAAGCGCCGTGGGAAGAGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR GCA 90 bp CCACAGGACCACCCTCATGCCCCTGGCAACAGCATGCAGGGCAGCTaGAGGATCCAGGTGGGACCCAGATACTATATGAAGGAGCCACCT +
Preference number: 1 (lower is better)
Translates to: PQDHPHAPGNSMQGS*RIQVGPRYYMKEPP
Trigger: AGGTGGCTCCTTCATATAGTATCTGGGTCCCACCTGGATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTGGTCCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR CCA 90 bp CCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATaGCCTGCTTTCTCATACCCCTACCCCGGACCAGTCTCACCAGCT +
Preference number: 1 (lower is better)
Translates to: PGLFQVPRVQHPAWP*PAFSYPYPGPVSPA
Trigger: AGCTGGTGAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR GCA 90 bp TCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTaGTTTCTCATACCCCTACCCCGGACCAGTCTCACCAGCTGTGGT +
Preference number: 1 (lower is better)
Translates to: SIPGSQSTAPSMAMA*FLIPLPRTSLTSCG
Trigger: ACCACAGCTGGTGAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR CCA 90 bp GATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTaGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATG +
Preference number: 1 (lower is better)
Translates to: DEEIPALPLLLCRGA*SIPGSQSTAPSMAM
Trigger: CATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR CCA 90 bp AGCTACTGGGATGGCATAGGCAGGTCCAATGCCCATGATGTCAGGTaGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATGGG +
Preference number: 1 (lower is better)
Translates to: SYWDGIGRSNAHDVR*DPNHCIRPQDPKDG
Trigger: CCCATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCTGCCTATGCCATCCCAGTAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR GCA 90 bp ATAGGCAGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTaGATAAGACCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTC +
Preference number: 1 (lower is better)
Translates to: IGRSNAHDVRWDPNH*IRPQDPKDGKAQLF
Trigger: GAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCTGCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR CCA 90 bp TCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCC +
Preference number: 1 (lower is better)
Translates to: SSWVTVMLLLVPLSS*TVVVTGTISAWKQP
Trigger: GGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR TCA 90 bp TGCCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCAT +
Preference number: 1 (lower is better)
Translates to: CLLLGSQGKGILLLP*NAKPLSHILRGYPH
Trigger: ATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR TCA 90 bp CTTTTTGCAAAGCTACTGGGATGGCATAGGCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCC +
Preference number: 1 (lower is better)
Translates to: LFAKLLGWHRQVQCP*CQVGPQPLHKTSGP
Trigger: GGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR GCA 90 bp CCAATCAGCACTCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAG +
Preference number: 1 (lower is better)
Translates to: PISTHFCWEARAKVS*FSREMPNRSATFSE
Trigger: CTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGTGCTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR TCA 90 bp CTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCA +
Preference number: 1 (lower is better)
Translates to: LGDPGCFYLAQLKRV*WVAQHPTHSYTMSS
Trigger: TGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR TCA 90 bp TCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCAT +
Preference number: 1 (lower is better)
Translates to: SLLLGSQGKGILLLP*NAKPLSHILRGYPH
Trigger: ATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR GCA 90 bp ACTCTCCAGCCCTTTAAACATTCCTCCCCAATCAGCACTCACTTCTaGTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATG +
Preference number: 1 (lower is better)
Translates to: TLQPFKHSSPISTHF*WEARAKVSCFSREM
Trigger: CATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGTGCTGATTGGGGAGGAATGTTTAAAGGGCTGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR TCA 90 bp CCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCACTGCCACCACCACCAGTGCTGAGT +
Preference number: 1 (lower is better)
Translates to: PLLYHVISVHIFQMS*SALICPLPPPPVLS
Trigger: ACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR GCA 90 bp CCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCC +
Preference number: 1 (lower is better)
Translates to: PIPCHQCSHFPNELK*LDLSTATTTSAEFS
Trigger: GGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR GCA 90 bp TTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAACCATGGCCTTGTGGCCTGGGTGACC +
Preference number: 1 (lower is better)
Translates to: FMHFYYAHCTSHPWI*LALRINHGLVAWVT
Trigger: GGTCACCCAGGCCACAAGGCCATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR CCA 90 bp GATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATaGATTTGCCTTGCCTTAAGAATTAACCATGGCCTTGTGGCCTGG +
Preference number: 1 (lower is better)
Translates to: DKFMHFYYAHCTSHP*ICLALRINHGLVAW
Trigger: CCAGGCCACAAGGCCATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCGCATCGGGGTGGGGATaGGGAGATCCCAGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: RTPRMGRPNSSALDLRASASGWG*GDPSPP
Trigger: GGGAGGGCTGGGATCTCCTCATCCCCACCCCGATGC...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CCA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGCCACCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 2 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQCHLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGTGGCA...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447223.5
3UTR-3UTR GCA 90 bp GGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGCCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 2 (lower is better)
Translates to: GKAQLFCLGPPGQQDGSCQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...GCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 2 (lower is better)
Translates to: MGRPNSSALDLRASRMAAWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 2 (lower is better)
Translates to: LEGRLQFGQALHGGAGADWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...ATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 2 (lower is better)
Translates to: ARPSMVVLGRIPSSWVTVVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...CACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 90 bp ATGGACACCACTCCGTATGCCCTCTTCCCACGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGTCGTGCCCCAGTGCAGCCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: MDTTPYALFPRRFSS*SSVMTCRAPVQPSG
Trigger: CCCACTGGGCTGCACTGGGGCACGACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCGTGGGAAGAGGGCATACGGAGTGGTGTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: EGRLQFGQALHGGAGADTALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...GGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCACATGGACTCCACCCTaGTATGCTGGCCACTGCCTG +
Preference number: 2 (lower is better)
Translates to: RTPRMGRPNSSALDLRASTWTPP*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGGTGGAGTCCATGT...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR-3UTR CCA 90 bp GCACCCAGCATGGCCATGGCCTGCTTTCTCATACCCCTACCCCGGACCAGTCTCCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 2 (lower is better)
Translates to: APSMAMACFLIPLPRTSLPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...GAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CCA 90 bp CATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 2 (lower is better)
Translates to: HGGAGADTLILGHSDAPLPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...AAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp AGGCATCGGGGTGGGGATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGATGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 2 (lower is better)
Translates to: RHRGGDEEIPALPLLLCRWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...TCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCATCCCCACCCCGATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR TCA 90 bp CTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LRTPRMGRPNSSALDLRAILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...GGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp GGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 2 (lower is better)
Translates to: GSGSHSSPDAHGHHSVCPQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...AGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CCCACAGGACCACCCTCATGCCCCTGGCAACAGCATGCAGGGCAGCTGCAGGATAGCATGGCCATGGCCTaGTTTCTCATACCCCTACCC +
Preference number: 2 (lower is better)
Translates to: PTGPPSCPWQQHAGQLQDSMAMA*FLIPLP
Trigger: GGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCT...ATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTGGTCCTGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR-3UTR GCA 90 bp AGCACCCAGCATGGCCATGGCCTGCTTTCTCATACCCCTACCCCGGACCAGTCTGACTCCACCCTGCTATaGTGGCCACTGCCTGTAGCC +
Preference number: 2 (lower is better)
Translates to: STQHGHGLLSHTPTPDQSDSTLL*WPLPVA
Trigger: GGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAGTC...AGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR-3UTR CCA 90 bp GCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: AWSIPGSQSTAPSMAMACRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...GCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR GCA 90 bp CCTGGGACCTCACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: PGTSLSSQGIQRRQRLPFKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...GAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACTGAGTGAGGTCCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PQDPKDGKAQLFCLGPPGGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 2 (lower is better)
Translates to: LRTPRMGRPNSSALDLRAHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...GGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 2 (lower is better)
Translates to: EPSFLKAGFSLARPSMVVPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...CACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 2 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCCACCCAGCATGGCCATaGCCTGCTTTCTCATACCCC +
Preference number: 2 (lower is better)
Translates to: AWSIPGSQSTAPSMAMACHPAWP*PAFSYP
Trigger: GGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTG...GCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CCA 90 bp AGGATGGCAGCTGCCCCATCACTCACCTGGCTAGAGTTTCCTAGGGGCAAACTGTCCACCCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 2 (lower is better)
Translates to: RMAAAPSLTWLEFPRGKLSTLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGGTGGA...CAGTTTGCCCCTAGGAAACTCTAGCCAGGTGAGTGATGGGGCAGCTGCCATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR CAA 90 bp GTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATC +
Preference number: 2 (lower is better)
Translates to: VLGRIPSSWVTVMLL*VPLSSWTVVVTGTI
Trigger: GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 90 bp CCCTACCCCGGACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: PYPGPVSPAVVEPSF*KAGFSLARPSMVVL
Trigger: CAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGTCCGGGGTAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR GCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: RTPRMGRPNSSALDLRASRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp AGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 2 (lower is better)
Translates to: RSNAHDVRWDPNHCIRPQGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...CTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 2 (lower is better)
Translates to: LHGGAGADTLILGHSDAPRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...AGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: LGHSDAPLGALVIMDRGGRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...ACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 90 bp TCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCC +
Preference number: 2 (lower is better)
Translates to: SPAVVEPSFLKAGFS*ARPSMVVLGRIPSS
Trigger: GGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
3UTR-3UTR TCA 90 bp GGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: GSGSHSSPDAHGHHSVCPHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...AGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp CCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: PSFLKAGFSLARPSMVVLHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...CAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: WTVVVTGTISAWKQPLLWALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: MVVLGRIPSSWVTVMLLLLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...CAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 2 (lower is better)
Translates to: PLSSWTVVVTGTISAWKQGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...CTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCCCACCCCACAGGCCATaGCAATGTCATAAGACCCAT +
Preference number: 2 (lower is better)
Translates to: SMVVLGRIPSSWVTVMLLPPHRP*QCHKTH
Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGG...GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447223.5
3UTR-3UTR CCA 90 bp CTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 2 (lower is better)
Translates to: LHGGAGADTLILGHSDAPHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...AGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp ATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 2 (lower is better)
Translates to: ILGHSDAPLGALVIMDRGRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...ACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: RIPSSWVTVMLLLVP*SSWTVVVTGTISAW
Trigger: CCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 90 bp TTTCCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCC +
Preference number: 2 (lower is better)
Translates to: FPAVVEPSFLKAGFS*ARPSMVVLGRIPSS
Trigger: GGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625927.3
3UTR-3UTR GCA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCAGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: GRIPSSWVTVMLLLVPLSASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...TGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: SSWCPCHHGPWWSQAQSQALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...CTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SWVTVMLLLVPLSSWTVVLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...CACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: LSSQGIQRRQRLPFQSRCGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCTGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PGLFQVPRVQHPAWPWPAGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...AGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CCA 90 bp ACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 2 (lower is better)
Translates to: TIFLEGRLQFGQALHGGAVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...AGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: WEARAKVSCFSREMPNRSILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TTCCCACGGCGCTTCAGCTCATTGAGCAGCGTGATGACCTGTCGTGCCCCAGTGCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: FPRRFSSLSSVMTCRAPVPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...CACTGGGGCACGACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCGTGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTILGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp AGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RSNAHDVRWDPNHCIRPQLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...CTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp TCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: SSWCPCHHGPWWSQAQSQLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...CTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCACTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp AGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RSNAHDVRWDPNHCIRPQRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...CTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp AGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACAGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 2 (lower is better)
Translates to: SSQGIQRRQRLPFQSRCTAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...TGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR CAA 90 bp TCACTCACCTGGCTAGAGTTTCCAGCTGTGGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTG +
Preference number: 2 (lower is better)
Translates to: SLTWLEFPAVVEPSF*KAGFSLARPSMVVL
Trigger: CAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGAAACTCTAGCCAGGTGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625927.3
3UTR-3UTR GCA 90 bp CTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: LLVPLSSWTVVVTGTISAASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...AGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: HDVRWDPNHCIRPQDPKDASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...ATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp TCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: SPAVVEPSFLKAGFSLARHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...CCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411549.5
3UTR-3UTR CCA 90 bp AGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 2 (lower is better)
Translates to: RAKVSCFSREMPNRSATFLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...GAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp TCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SWTVVVTGTISAWKQPLLGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR CAA 90 bp CTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTaGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTG +
Preference number: 2 (lower is better)
Translates to: LSTATTTSAEFSHVV*LLWCYCLAARAAGL
Trigger: CAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp GGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 2 (lower is better)
Translates to: GKPGQRYPASPVKCQTAQTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...CTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
3UTR-3UTR GCA 90 bp TCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SFLKAGFSLARPSMVVLGRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...CCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GTGATGACCTGTCGTGCCCCAGTGCAGCCCAGTGGGTGCCCTAAGGCCACTGCATCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 2 (lower is better)
Translates to: VMTCRAPVQPSGCPKATASHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...TGCAGTGGCCTTAGGGCACCCACTGGGCTGCACTGGGGCACGACAGGTCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: SSWTVVVTGTISAWKQPLASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...CAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 2 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 2 (lower is better)
Translates to: LVIMDRGGHRHNLSLETAHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...GGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTCACTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: GSLACKGLIDLEDVHVTHCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GTGAGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp CTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LVIMDRGGHRHNLSLETAHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...GGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: PSHFYFAEGPGLFQVPRVLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...TACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411549.5
3UTR-3UTR GCA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 2 (lower is better)
Translates to: MGRPNSSALDLRASRMAASHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 2 (lower is better)
Translates to: MGRPNSSALDLRASRMAAFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GAAAGCACTCACTGCCCAGCAGTAACCACGAAATGGTGCCACTTCAGACCACTTGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 2 (lower is better)
Translates to: ESTHCPAVTTKWCHFRPLASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...AAGTGGTCTGAAGTGGCACCATTTCGTGGTTACTGCTGGGCAGTGAGTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR-3UTR GCA 90 bp GGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: GQRYPASPVKCQTAQPHSRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...AGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GTAGGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: VGSLACKGLIDLEDVHVTRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...AGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 2 (lower is better)
Translates to: TFSEVIPIGIRQSLAFSFALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...GAAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp CACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: HFYFAEGPGLFQVPRVQHCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CCA 90 bp ACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: TSCGRTIFLEGRLQFGQACHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
3UTR-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp CACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 2 (lower is better)
Translates to: HILRGYPHRNQAISGLLLILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...AAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: SSWTVVVTGTISAWKQPLPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...CAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp CTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 2 (lower is better)
Translates to: LHGGAGADTLILGHSDAPFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...AGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp TCATTGATCTCGAAGATGTCCACGTCACTCACTGTCAGCCCTGCTTTTTGCAAACACCCAGCATGGCCATaGCCTGCTTTCTCATACCCC +
Preference number: 2 (lower is better)
Translates to: SLISKMSTSLTVSPAFCKHPAWP*PAFSYP
Trigger: GGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTG...TTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000411549.5
3UTR-3UTR GCA 90 bp TCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGACTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SREMPNRSATFSEVIPIGLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...TCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 2 (lower is better)
Translates to: TIFLEGRLQFGQALHGGAFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...AGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 2 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR CAA 90 bp CCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCCACTGCCACCACCACCAGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: PTPIPCHQCSHFPNE*KCLDLSTATTTSAE
Trigger: CTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: INSCTFTMPIALLIHGFASSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 2 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 2 (lower is better)
Translates to: CFSREMPNRSATFSEVIPFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...GGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 2 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 2 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 2 (lower is better)
Translates to: YAHCTSHPWICLALRINHRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CCA 90 bp AATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 2 (lower is better)
Translates to: NSCTFTMPIALLIHGFALHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...CAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 2 (lower is better)
Translates to: SCTFTMPIALLIHGFALPHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCCAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 2 (lower is better)
Translates to: INSCTFTMPIALLIHGFAQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 2 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 2 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TCATTGATCTCGAAGATGTCCACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SLISKMSTSLTVSPAFCKRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...TTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATCTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: YAHCTSHPWICLALRINHLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 2 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR TCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 2 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR GCA 72 bp CCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: PQDPKDGKAQLF*LGPPGQQDGSC
Trigger: GCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR CCA 72 bp AGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATaGACACCACTCCGTATGCCCTCTTCCCACGGCGCT +
Preference number: 3 (lower is better)
Translates to: RRQRLPFQSRCT*TPLRMPSSHGA
Trigger: AGCGCCGTGGGAAGAGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: QDPKDGKAQLFCLGPPGQAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 3 (lower is better)
Translates to: WEGPTLLPWTSGPAGWQLLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...CAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCCCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: FKDGSGSHSSPDAHGHHSPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...GGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CCACCCTCATGCCCCTGGCAACAGCATGCAGGGCAGCTGCAGGATCCAGGTGGGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PPSCPWQQHAGQLQDPGGRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CCCACCTGGATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR-3UTR CAA 90 bp GCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 3 (lower is better)
Translates to: ARPSMVVLGRIPSSWVTVTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...CACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR GCA 72 bp GGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTaGTTTCTCATACCCCTACCCCGGACCAGTCTCACC +
Preference number: 3 (lower is better)
Translates to: GSQSTAPSMAMA*FLIPLPRTSLT
Trigger: GGTGAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CAA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: MGRPNSSALDLRASRMAACGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp AAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 3 (lower is better)
Translates to: KAGFSLARPSMVVLGRIPRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...GGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CCA 72 bp TTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATaGCCTGCTTTCTCATACCCCTACCCCGGACCAGTC +
Preference number: 3 (lower is better)
Translates to: FQVPRVQHPAWP*PAFSYPYPGPV
Trigger: GACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR-3UTR CAA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: HDVRWDPNHCIRPQDPKDAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...ATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCAGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 3 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp GAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 3 (lower is better)
Translates to: EARAKVSCFSREMPNRSALLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...GGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 3 (lower is better)
Translates to: WTVVVTGTISAWKQPLLWLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR GCA 72 bp GGGGATGAGGAGATCCCAGCCCTCCCACTTCTACTTTaGAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGT +
Preference number: 3 (lower is better)
Translates to: GDEEIPALPLLL*RGAWSIPGSQS
Trigger: ACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR GCA 72 bp TCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTaGATAAGACCTCAGGACCCCAAGGATGGGAAGGCC +
Preference number: 3 (lower is better)
Translates to: SNAHDVRWDPNH*IRPQDPKDGKA
Trigger: GGCCTTCCCATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR GCA 72 bp ATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATaGACATGGACACCACTCCGTATGCCCTCTTCCCAC +
Preference number: 3 (lower is better)
Translates to: IQRRQRLPFQSR*TWTPLRMPSSH
Trigger: GTGGGAAGAGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR GCA 72 bp CACCCTCATGCCCCTGGCAACAGCATGCAGGGCAGCTaGAGGATCCAGGTGGGACCCAGATACTATATGAAG +
Preference number: 3 (lower is better)
Translates to: HPHAPGNSMQGS*RIQVGPRYYMK
Trigger: CTTCATATAGTATCTGGGTCCCACCTGGATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR CCA 72 bp ATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTaGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGC +
Preference number: 3 (lower is better)
Translates to: IPALPLLLCRGA*SIPGSQSTAPS
Trigger: GCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR CCA 72 bp GATGGCATAGGCAGGTCCAATGCCCATGATGTCAGGTaGGACCCCAACCACTGCATAAGACCTCAGGACCCC +
Preference number: 3 (lower is better)
Translates to: DGIGRSNAHDVR*DPNHCIRPQDP
Trigger: GGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCTGCCTATGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR CCA 72 bp CGGGCCAGCAGGATGGCAGCTGCCCCATCACTCACCTaGCTAGAGTTTCCAGCTGTGGTAGAACCATCTTTC +
Preference number: 3 (lower is better)
Translates to: RASRMAAAPSLT*LEFPAVVEPSF
Trigger: GAAAGATGGTTCTACCACAGCTGGAAACTCTAGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625927.3
3UTR-3UTR CAA 90 bp ATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 3 (lower is better)
Translates to: MVVLGRIPSSWVTVMLLLTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...CAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 3 (lower is better)
Translates to: LPLLLCRGAWSIPGSQSTKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...TGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR TCA 72 bp TGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAGTCTCCGGGATGTCAC +
Preference number: 3 (lower is better)
Translates to: WPLPVAPTNTVY*QWTKAQSPGCH
Trigger: GTGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
3UTR-3UTR CAA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 3 (lower is better)
Translates to: PSFLKAGFSLARPSMVVLRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAGCTACTGGGATGGCATAGGCCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 3 (lower is better)
Translates to: HVTHCQPCFLQSYWDGIGLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...GCCTATGCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 3 (lower is better)
Translates to: SWVTVMLLLVPLSSWTVVTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...CACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: MGRPNSSALDLRASRMAAVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR TCA 72 bp CTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGCCACATTCTCAGAGGT +
Preference number: 3 (lower is better)
Translates to: LGSQGKGILLLP*NAKPLSHILRG
Trigger: ACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR TCA 72 bp AAGCTACTGGGATGGCATAGGCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAACCACTGCATAAGACC +
Preference number: 3 (lower is better)
Translates to: KLLGWHRQVQCP*CQVGPQPLHKT
Trigger: GGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCTGCCTATGCCATCCCAGTAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR TCA 72 bp CCACACAGTAGGCAGCCTGGCTTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGTCACTCACTGTCAGCC +
Preference number: 3 (lower is better)
Translates to: PHSRQPGLQRPH*SRRCPRHSLSA
Trigger: GGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTACTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR GCA 72 bp ACTCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCAAACCGCTCAGCCACA +
Preference number: 3 (lower is better)
Translates to: THFCWEARAKVS*FSREMPNRSAT
Trigger: TGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR CCA 72 bp TGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAGCTTGGAAACAGCCCT +
Preference number: 3 (lower is better)
Translates to: CSSWCPCHHGPW*SQAQSQLGNSP
Trigger: AGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CCA 72 bp GTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGCACAATCTCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: VTVMLLLVPLSS*TVVVTGTISAW
Trigger: CCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp ACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGCTCTTGCTGCCTTCTGCTGGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 3 (lower is better)
Translates to: TISAWKQPLLWALAAFCWRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR TCA 72 bp CCAGGCTGCTTTTATCTTGCACAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCCACCCACTCCTATACC +
Preference number: 3 (lower is better)
Translates to: PGCFYLAQLKRV*WVAQHPTHSYT
Trigger: GGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 3 (lower is better)
Translates to: RINHGLVAWVTQAAFILHCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 3 (lower is better)
Translates to: CWEARAKVSCFSREMPNRDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...GCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
3UTR GCA 72 bp AAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACATTCTCAGAGGTTATCC +
Preference number: 3 (lower is better)
Translates to: KPGQRYPASPVK*QTAQPHSQRLS
Trigger: GGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR GCA 72 bp CCCTTTAAACATTCCTCCCCAATCAGCACTCACTTCTaGTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCC +
Preference number: 3 (lower is better)
Translates to: PFKHSSPISTHF*WEARAKVSCFS
Trigger: GGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGTGCTGATTGGGGAGGAATGTTTAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR CCA 72 bp GTCACTCACTGTCAGCCCTGCTTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCCAATGCCCATGATGTC +
Preference number: 3 (lower is better)
Translates to: VTHCQPCFLQSY*DGIGRSNAHDV
Trigger: GACATCATGGGCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCAGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 3 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
3UTR-3UTR CAA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp TATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: YSKTAAAPIPVPMHMDTTHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...AGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp ATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: ILGHSDAPLGALVIMDRGHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...ACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR TCA 72 bp GCAGCTGCAGGATCCAGGTGGGACCCAGATACTATATaGAGGAGCCACCTTACCTGCTTTTTGCAAAGCTAC +
Preference number: 3 (lower is better)
Translates to: AAAGSRWDPDTI*RSHLTCFLQSY
Trigger: GTAGCTTTGCAAAAAGCAGGTAAGGTGGCTCCTTCATATAGTATCTGGGTCCCACCTGGATCCTGCAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR-3UTR CAA 90 bp GTAGGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 3 (lower is better)
Translates to: VGSLACKGLIDLEDVHVTVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...AGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: RINHGLVAWVTQAAFILHHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 3 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
3UTR GCA 72 bp TTTTACTATGCCCATTGCACTTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAACCATGGCCTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: FYYAHCTSHPWI*LALRINHGLVA
Trigger: GGCCACAAGGCCATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
3UTR-3UTR CAA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 3 (lower is better)
Translates to: INSCTFTMPIALLIHGFAHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: ARPSMVVLGRIPSSWVTVGRFGP*LPRPQA
Trigger: AGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCC...CACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR TCA 90 bp GGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCGCATCGGGGTGGGGATaGGGAGATCCCAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GRLQFGQALHGGAGADTLASGWG*GDPSPP
Trigger: GGGAGGGCTGGGATCTCCTCATCCCCACCCCGATGC...GAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp CCCACAGGACCACCCTCATGCCCCTGGCAACAGCATGCAGGGCAGCTGCAGGATGCCGGACCCCTCAGGTaGCCCAGCACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTGPPSCPWQQHAGQLQDAGPLR*PSTTCS
Trigger: GCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGC...ATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTGGTCCTGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR TCA 90 bp CTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATGCATCGGGGTGGGGATaGGGAGATCCCAGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LEGRLQFGQALHGGAGADASGWG*GDPSPP
Trigger: GGGAGGGCTGGGATCTCCTCATCCCCACCCCGATGC...ATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp TGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: WEGPTLLPWTSGPAGWQLWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...CAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GRLQFGQALHGGAGADTLPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...GAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GFSLARPSMVVLGRIPSSWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...GGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: PQDPKDGKAQLFCLGPPGNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...GCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: MRRSQPSHFYFAEGPGLFGRFGP*LPRPQA
Trigger: AGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCC...GAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR TCA 90 bp GTGATGACCTGTCGTGCCCCAGTGCAGCCCAGTGGGTGCCCTAAGGCCACTGCACAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: VMTCRAPVQPSGCPKATAQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...TGCAGTGGCCTTAGGGCACCCACTGGGCTGCACTGGGGCACGACAGGTCATCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: LGHSDAPLGALVIMDRGGRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...ACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: MVVLGRIPSSWVTVMLLLDSGHD*PGPRLQ
Trigger: CTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATC...CAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR GCA 90 bp GCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ARPSMVVLGRIPSSWVTVLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...CACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: GWEGPTLLPWTSGPAGWQQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...CTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTCCGGGCCAGCAGGATaGCAGCTGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: SMVVLGRIPSSWVTVMLLSGPAG*QLPHHS
Trigger: TGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGA...GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MGRPNSSALDLRASRMAALQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTCTTCTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: AAPIPVPMHMDTTPYALFWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...GAAGAGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: PSAGKPGQRYPASPVKCQRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...TTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCAGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: GRIPSSWVTVMLLLVPLSGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...TGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCAGCTGCCCCATCACTCACCTGGCTAGAGTTTCCTAGGGGCAAACTGTTGGGGAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: AAAPSLTWLEFPRGKLLGSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...CCCCAACAGTTTGCCCCTAGGAAACTCTAGCCAGGTGAGTGATGGGGCAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp CCTGGGACCTCACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGTSLSSQGIQRRQRLPFSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...GAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACTGAGTGAGGTCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TTCCCACGGCGCTTCAGCTCATTGAGCAGCGTGATGACCTGTCGTGCCCCAGTGCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: FPRRFSSLSSVMTCRAPVQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...CACTGGGGCACGACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCGTGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCGGACCCCTCAGGTaGCCCAGCACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSAGPLR*PSTTCS
Trigger: GCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGC...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGTGCCACCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: MVVLGRIPSSWVTVMLLLCHLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGTGGCA...CAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447223.5
CDS-3UTR CCA 90 bp TGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: CWEARAKVSCFSREMPNRWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...GCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LHGGAGADTLILGHSDAPVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...AGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: LEGRLQFGQALHGGAGADRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...ATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCCACCCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRIPSSWVTVMLLLVPLSSTLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGGTGGA...TGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
3UTR CAA 72 bp ACTCCGTATGCCCTCTTCCCACGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGTCGTGCCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPYALFPRRFSS*SSVMTCRAPVQ
Trigger: CTGCACTGGGGCACGACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCGTGGGAAGAGGGCATACGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AKVSCFSREMPNRSATFSGRFGP*LPRPQA
Trigger: AGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCC...TGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR TCA 90 bp AGCACCCAGCATGGCCATGGCCTGCTTTCTCATACCCCTACCCCGGACCAGTCTCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: STQHGHGLLSHTPTPDQSHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...AGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp TCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTCCGCCCACAGCTCTaGGAACAGACGCGAGCGACC +
Preference number: 4 (lower is better)
Translates to: SSWCPCHHGPWWSQAQSQLRPQL*EQTRAT
Trigger: GGTCGCTCGCGTCTGTTCGCAGAGCTGTGGGCGGAG...CTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp GTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: VVLGRIPSSWVTVMLLLVLQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...CACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCGCCCCGGCCCCAGGCTaGAGCACATTTCCGACACAG +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVAPAPG*STFPTQ
Trigger: CTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGC...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR GCA 90 bp TATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YSKTAAAPIPVPMHMDTTDSGHD*PGPRLQ
Trigger: CTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATC...AGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCAGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSDSGHD*PGPRLQ
Trigger: CTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATC...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR GCA 90 bp GGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: GRLQFGQALHGGAGADTLRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...GAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: RVFKDGSGSHSSPDAHGHGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...GTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: LRTPRMGRPNSSALDLRAVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...GGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTGTGCAGCCCAGTGGGTaGCCTAAGGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: YSKTAAAPIPVPMHMDTTVQPSG*PKATAP
Trigger: GGGTGCAGTGGCCTTAGGGCACCCACTGGGCTGCAC...AGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCCTGTCGTGCCCCAGTaGAGCCCAGTGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQPVVPQ*SPVGAL
Trigger: TAGGGCACCCACTGGGCTGCACTGGGGCACGACAGG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HGGAGADTLILGHSDAPLKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...AAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCCACCCTGCTATGCTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTGGACTCCACCCTGCTATaGTGGCCACTGCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: LHPAMLATACSPDEHCLLDSTLL*WPLPVA
Trigger: GGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAGTC...CAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp GCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: ARPSMVVLGRIPSSWVTVCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...CACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: HDVRWDPNHCIRPQDPKDPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...ATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCATGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCCACCCAGCATGGCCATaGCCTGCTTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: SMVVLGRIPSSWVTVMLLHPAWP*PAFSYP
Trigger: GGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTG...GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR TCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRGRFGP*LPRPQA
Trigger: AGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCC...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR GCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTGCGCAGGTCAACCCTaGAGACCAGCCACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTICAGQP*RPATSP
Trigger: CGGACTGGTGGCTGGTCTGCAGGGTTGACCTGCGCA...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: LHQARSNISRVPSVSQGHRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...ATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: GPVSPAVVEPSFLKAGFSRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...ACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR GCA 90 bp TGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: WTVVVTGTISAWKQPLLWNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCGCCCCGGCCCCAGGCTaGAGCACATTTCCGACACAG +
Preference number: 4 (lower is better)
Translates to: TSCGRTIFLEGRLQFGQAAPAPG*STFPTQ
Trigger: CTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGC...GGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLVPLSSWTVVVTGTISAGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...AGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCCCTGTCGTGCCCCAGTaGAGCCCAGTGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSPVVPQ*SPVGAL
Trigger: TAGGGCACCCACTGGGCTGCACTGGGGCACGACAGG...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCCTGTCGTGCCCCAGTaGAGCCCAGTGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLPVVPQ*SPVGAL
Trigger: TAGGGCACCCACTGGGCTGCACTGGGGCACGACAGG...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCACGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGATGGCAGCTGCCCCATCACTCACCTGGCTAGAGTTTCCTAGGGGCAAACTGGACTCCACCCTGCTATaGTGGCCACTGCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: RMAAAPSLTWLEFPRGKLDSTLL*WPLPVA
Trigger: GGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAGTC...CAGTTTGCCCCTAGGAAACTCTAGCCAGGTGAGTGATGGGGCAGCTGCCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp GGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGGACTCCACCCTGCTATaGTGGCCACTGCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: GKPGQRYPASPVKCQTAQDSTLL*WPLPVA
Trigger: GGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAGTC...CTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTGCCGGACCCCTCAGGTaGCCCAGCACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSCFSREMPNRSATFSEVAGPLR*PSTTCS
Trigger: GCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGC...AACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGAGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: PRVFKDGSGSHSSPDAHGVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...TCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: SFLKAGFSLARPSMVVLGVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...CCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: GQRYPASPVKCQTAQPHSPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...AGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SWVTVMLLLVPLSSWTVVRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...CACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCCGGGCCAGCAGGATaGCAGCTGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQSGPAG*QLPHHS
Trigger: TGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGA...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTCCGGGCCAGCAGGATaGCAGCTGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: SWTVVVTGTISAWKQPLLSGPAG*QLPHHS
Trigger: TGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGA...GAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTGCCCATGATGTCAGGTaGGACCCCAACCACTGCATA +
Preference number: 4 (lower is better)
Translates to: LHGGAGADTLILGHSDAPAHDVR*DPNHCI
Trigger: TATGCAGTGGTTGGGGTCCCACCTGACATCATGGGC...AGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGTCCACCCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: RSNAHDVRWDPNHCIRPQSTLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGGTGGA...CTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCCTAGGGGCAAACTGTTaGGGTAAGAAGGCATCGGGG +
Preference number: 4 (lower is better)
Translates to: AWSIPGSQSTAPSMAMACLGANC*GKKASG
Trigger: CCCCGATGCCTTCTTACCCCAACAGTTTGCCCCTAG...GCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR TCA 90 bp GGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: GKPGQRYPASPVKCQTAQHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...CTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: WTVVVTGTISAWKQPLLWHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: RVFKDGSGSHSSPDAHGHQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...GTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: LILGHSDAPLGALVIMDRWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGAGGCAAGGCGCGGCCTaGGGCATCCAGCCGGAATCG +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLRQGAA*GIQPES
Trigger: CGATTCCGGCTGGATGCCGCAGGCCGCGCCTTGCCT...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCAAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATGCCACCTGCTATGCTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTGGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: MPPAMLATACSPDEHCLLALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...CAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAGCATAGCAGGTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447223.5
CDS-3UTR GCA 90 bp GTAGGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: VGSLACKGLIDLEDVHVTGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...AGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATGTGCAGCCCAGTGGGTaGCCTAAGGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHVQPSG*PKATAP
Trigger: GGGTGCAGTGGCCTTAGGGCACCCACTGGGCTGCAC...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCAGTGCAGCCCAGTGGGTaGCCTAAGGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSVQPSG*PKATAP
Trigger: GGGTGCAGTGGCCTTAGGGCACCCACTGGGCTGCAC...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: LSSQGIQRRQRLPFQSRCPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...GCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGATGACCTGTCGTGCCCCAGTGCAGCCCAGTGGGTGCCCTAAGGCCACTGCACTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VMTCRAPVQPSGCPKATALLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...TGCAGTGGCCTTAGGGCACCCACTGGGCTGCACTGGGGCACGACAGGTCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: MGRPNSSALDLRASRMAALGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSHFYFAEGPGLFQVPRVQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...TACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGAGCCACCTTACCTaGTTTTTGCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RTPRMGRPNSSALDLRASRSHLT*FLQSYW
Trigger: CCAGTAGCTTTGCAAAAAGCAGGTAAGGTGGCTCCT...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR GCA 90 bp CACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACAGCATGCAGGGCAGCTaGAGGATCCAGGTGGGACCC +
Preference number: 4 (lower is better)
Translates to: HFYFAEGPGLFQVPRVQHSMQGS*RIQVGP
Trigger: GGGTCCCACCTGGATCCTGCAGCTGCCCTGCATGCT...GTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR GCA 90 bp CGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACTCCACCCTCCCCTGGCAACAGCATaGAGGGCAGCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: RSNISRVPSVSQGHGLHPPLATA*RAAAGS
Trigger: GGATCCTGCAGCTGCCCTGCATGCTGTTGCCAGGGG...AGGGTGGAGTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTGCCGGACCCCTCAGGTaGCCCAGCACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRAGPLR*PSTTCS
Trigger: GCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGC...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGGCCGGACCCCTCAGGTaGCCCAGCACTACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLAGPLR*PSTTCS
Trigger: GCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGC...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: VVLGRIPSSWVTVMLLLVHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...CACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: ILGHSDAPLGALVIMDRGPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...ACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTCCGGGCCAGCAGGATaGCAGCTGCCCCATCACTCA +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSSGPAG*QLPHHS
Trigger: TGAGTGATGGGGCAGCTGCCATCCTGCTGGCCCGGA...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGCCCATGATGTCAGGTaGGACCCCAACCACTGCATA +
Preference number: 4 (lower is better)
Translates to: FKDGSGSHSSPDAHGHHSAHDVR*DPNHCI
Trigger: TATGCAGTGGTTGGGGTCCCACCTGACATCATGGGC...GGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCTTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RTPRMGRPNSSALDLRASFLQSY*DGIGRS
Trigger: GGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAA...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGCACTCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAATTCCCACCCCCAACCTaGGTGGCACAAGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: STHFCWEARAKVSCFSREFPPPT*VAQGLE
Trigger: TTCCAGGCCTTGTGCCACCCAGGTTGGGGGTGGGAA...TTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR TCA 90 bp CCTGCTTTCTCATACCCCTACCCCGGACCAGTCTCACCAGCTGTGGTAGAACCAATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PAFSYPYPGPVSPAVVEPILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...TGGTTCTACCACAGCTGGTGAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR TCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGGTCCAATGCCCATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: RSNAHDVRWDPNHCIRPQHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...CTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATGGGCATTGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCACAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATGCGCAGGTCAACCCTaGAGACCAGCCACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSCAGQP*RPATSP
Trigger: CGGACTGGTGGCTGGTCTGCAGGGTTGACCTGCGCA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTGCGCAGGTCAACCCTaGAGACCAGCCACCAGTCCG +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHCAGQP*RPATSP
Trigger: CGGACTGGTGGCTGGTCTGCAGGGTTGACCTGCGCA...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TIFLEGRLQFGQALHGGALQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...AGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: CPCHHGPWWSQAQSQLGNWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...GTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCCGACGAACACTGTCTATTGACAGTGGACAAAGGCACAGTCTCCGGGATGTCAAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: PDEHCLLTVDKGTVSGMSNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...TGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGAGCCCCGGCCCCAGGCTaGAGCACATTTCCGACACAG +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGAPAPG*STFPTQ
Trigger: CTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGC...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR GCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSDSGHD*PGPRLQ
Trigger: CTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATC...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR GCA 90 bp CCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTAGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: PSHFYFAEGPGLFQVPRVALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...TACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCGTGCAGCCCAGTGGGTaGCCTAAGGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSVQPSG*PKATAP
Trigger: GGGTGCAGTGGCCTTAGGGCACCCACTGGGCTGCAC...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGGTGCAGCCCAGTGGGTaGCCTAAGGCCACTGCACCC +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLVQPSG*PKATAP
Trigger: GGGTGCAGTGGCCTTAGGGCACCCACTGGGCTGCAC...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCCTGTCGTGCCCCAGTaGAGCCCAGTGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLPVVPQ*SPVGAL
Trigger: TAGGGCACCCACTGGGCTGCACTGGGGCACGACAGG...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: PSFLKAGFSLARPSMVVLPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...CAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTAGGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: VGSLACKGLIDLEDVHVTQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...AGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLSSWTVVVTGTISAWKQKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...CTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGGGGATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTCCCACTTCTACTTTaGAGAGGGGCCTGGTCTATT +
Preference number: 4 (lower is better)
Translates to: VGMRRSQPSHFYFAEGPGLPLLL*RGAWSI
Trigger: AATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAG...ACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCATCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTGCCACCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCCHLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGTGGCA...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000333167.13
CDS-3UTR CCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: WEARAKVSCFSREMPNRSVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTAGGCAGCCTGGCTTGCAAAGGCCTCATTGATCTCGAAGATGTCCACGTCACTCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VGSLACKGLIDLEDVHVTPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...AGTGACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATACCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: FSREMPNRSATFSEVIPIPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...TATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: SGLLLLHQARSNISRVPSWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...AGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: HFYFAEGPGLFQVPRVQHRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...GTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp TCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: SSWTVVVTGTISAWKQPLRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...CAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VVEPSFLKAGFSLARPSMRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: DAPLGALVIMDRGGHRHNQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...ATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LILGHSDAPLGALVIMDRHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CCTGGGACCTCACTCAGTTCCCAGGGTATTCAAAGACGGCAGCGGCTCCCATTCGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: PGTSLSSQGIQRRQRLPFAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...GAATGGGAGCCGCTGCCGTCTTTGAATACCCTGGGAACTGAGTGAGGTCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCTCCACCCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SCFSREMPNRSATFSEVISTLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGGTGGA...GATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTCACCCAGCATGGCCATaGCCTGCTTTCTCATACCCC +
Preference number: 4 (lower is better)
Translates to: ILGHSDAPLGALVIMDRGHPAWP*PAFSYP
Trigger: GGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTG...ACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp ACTCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCACCCCCAACCTGGGTaGCACAAGGCCTGGAAAGCA +
Preference number: 4 (lower is better)
Translates to: THFCWEARAKVSCFSREMHPQPG*HKAWKA
Trigger: TGCTTTCCAGGCCTTGTGCCACCCAGGTTGGGGGTG...CATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418880.1
3UTR CAA 72 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGGACCGTGGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: RIPSSWVTVMLL*VPLSSWTVVVT
Trigger: TGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 72 bp GTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATA +
Preference number: 4 (lower is better)
Translates to: VVEPSFLKAGFS*ARPSMVVLGRI
Trigger: TATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 72 bp CTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATaGACAGTGGACAAAGGCACAGTCTCCGGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LATACSPDEHCL*TVDKGTVSGMS
Trigger: TGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
CDS-3UTR TCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSGRFGP*LPRPQA
Trigger: AGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCC...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR TCA 90 bp GATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DAPLGALVIMDRGGHRHNILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...ATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp CTCACTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTSAGKPGQRYPASPVKCILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...GCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR TCA 90 bp CCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PSAGKPGQRYPASPVKCQILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...TTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp CCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: PLSSWTVVVTGTISAWKQQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...CTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGGACCCAGATACTATATaGAGGAGCCACCTTACCTGC +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGDPDTI*RSHLTC
Trigger: GCAGGTAAGGTGGCTCCTTCATATAGTATCTGGGTC...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR GCA 90 bp TGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CFSREMPNRSATFSEVIPLQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...GGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTITTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGATGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: SREMPNRSATFSEVIPIGWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...TCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGAAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: SREMPNRSATFSEVIPIGNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...TCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGATTTCTGATGCCACCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SWVTVMLLLVPLSSWTVVISDAT*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGTGGCATCAGAAAT...CACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447223.5
CDS-3UTR GCA 90 bp CCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCTAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: PGLFQVPRVQHPAWPWPARAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...AGCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: RAKVSCFSREMPNRSATFALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...GAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SWTVVVTGTISAWKQPLLLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...GAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: LILGHSDAPLGALVIMDRLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGACATGGACTCCACCCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: VVEPSFLKAGFSLARPSMTWTPP*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGGTGGAGTCCATGT...CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACTCCACCCTACATGGACTCCACCCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: RSNISRVPSVSQGHGLHPTWTPP*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGGTGGAGTCCATGT...AGGGTGGAGTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000418880.1
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCCCGGACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTAGCATGGCCATGGCCTaGTTTCTCATACCCCTACCC +
Preference number: 4 (lower is better)
Translates to: PRTSLTSCGRTIFLEGRLSMAMA*FLIPLP
Trigger: GGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCT...AAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGTCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp GTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGACAGGACCACCCTCATaGCCCTGGCAACAGCATGCA +
Preference number: 4 (lower is better)
Translates to: VVEPSFLKAGFSLARPSMTGPPS*PWQQHA
Trigger: TGCATGCTGTTGCCAGGGGCATGAGGGTGGTCCTGT...CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp TCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCATGTCACTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: SMVVLGRIPSSWVTVMLLMSLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGTGACAT...GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTTGCCACCTGCTATGCTaGCCACTGCCTGTAGCCCCG +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSCHLLC*PLPVAP
Trigger: CGGGGCTACAGGCAGTGGCCAGCATAGCAGGTGGCA...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000333167.13
CDS-3UTR CCA 90 bp ATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: ILGHSDAPLGALVIMDRGLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...ACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCACGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: RIPSSWVTVMLLLVPLSSRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...TGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCGCCCCATCACTCACCTaGCTAGAGTTTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIAPSLT*LEFPAV
Trigger: CACAGCTGGAAACTCTAGCCAGGTGAGTGATGGGGC...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625927.3
CDS-3UTR CCA 90 bp GCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATGGCCTGCTTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AWSIPGSQSTAPSMAMACFLQSY*DGIGRS
Trigger: GGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAA...GCAGGCCATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
3UTR CAA 72 bp ATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTGGGCTCTTGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: IMDRGGHRHNLS*ETALALGSCCL
Trigger: AAGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 72 bp TCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTGGTCACAGGCACAATC +
Preference number: 4 (lower is better)
Translates to: SSWVTVMLLLVP*SSWTVVVTGTI
Trigger: GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
3UTR CAA 72 bp GGACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: GPVSPAVVEPSF*KAGFSLARPSM
Trigger: CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR TCA 90 bp TCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SFLKAGFSLARPSMVVLGTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...CCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GPWWSQAQSQLGNSPCSGTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...CCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: RAKVSCFSREMPNRSATFTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...GAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: CPCHHGPWWSQAQSQLGNTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...GTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAG +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFWPSTT*SLCIAQ
Trigger: CTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCA...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGATTTCTGATGCCACCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQISDAT*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGTGGCATCAGAAAT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000333167.13
CDS-3UTR GCA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PSAGKPGQRYPASPVKCQASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...TTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RAKVSCFSREMPNRSATFLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...GAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: GSGSHSSPDAHGHHSVCPFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...AGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACCCAGCATGGCCATCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QRGLVYSRFPEYSTQHGHPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...ATGGCCATGCTGGGTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCCACCCCACAGGCCATaGCAATGTCATAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQPPHRP*QCHKTH
Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333167.13
ENST00000452171.5
CDS-3UTR GCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAACATGGACTCCACCCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: AKVSCFSREMPNRSATFSTWTPP*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGGTGGAGTCCATGT...TGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGCACCCAGCATGGCCATGGCCTGCTTTCTCATACCCCTACCCCGGACCAGTCTACCTTACCTGCTTTTTaGAAAGCTACTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: STQHGHGLLSHTPTPDQSTLPAF*KATGMA
Trigger: TGCCATCCCAGTAGCTTTGCAAAAAGCAGGTAAGGT...AGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCTGGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp TGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: CPCHHGPWWSQAQSQLGNLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...GTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HDVRWDPNHCIRPQDPKDGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...ATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: LGHSDAPLGALVIMDRGGCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...ACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CPCHHGPWWSQAQSQLGNRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...GTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCCAGGCCCTCCATGGTaGTGCTGGGGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTPGPPW*CWGGYP
Trigger: AGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCACATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: AKVSCFSREMPNRSATFSHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...TGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACTCCACCCTGCCCATGATGTCAGGTaGGACCCCAACCACTGCATA +
Preference number: 4 (lower is better)
Translates to: RSNISRVPSVSQGHGLHPAHDVR*DPNHCI
Trigger: TATGCAGTGGTTGGGGTCCCACCTGACATCATGGGC...AGGGTGGAGTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACCTAGGGGCAAACTGTTaGGGTAAGAAGGCATCGGGG +
Preference number: 4 (lower is better)
Translates to: CPCHHGPWWSQAQSQLGNLGANC*GKKASG
Trigger: CCCCGATGCCTTCTTACCCCAACAGTTTGCCCCTAG...GTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTCAGCCAGGGACATaGACTCCACCCTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQCQPGT*TPPSET
Trigger: AGTTTCTGAGGGTGGAGTCCATGTCCCTGGCTGACA...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450296.5
CDS-3UTR TCA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTCATAAGACCCATTTCTaGTGCCACCTGCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: LILGHSDAPLGALVIMDRHKTHF*CHLLCW
Trigger: CCAGCATAGCAGGTGGCATCAGAAATGGGTCTTATG...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447223.5
CDS-3UTR TCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp CCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAACACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PSAGKPGQRYPASPVKCQHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...TTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFLQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGLQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKDSGHD*PGPRLQ
Trigger: CTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATC...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
CDS-3UTR GCA 90 bp GTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: VVEPSFLKAGFSLARPSMASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LILGHSDAPLGALVIMDRRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCTCAAGGCCCAACTCTTCTaGCTTGGACCTCCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ILRGYPHRNQAISGLLLLKAQLF*LGPPGQ
Trigger: CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTT...GAGAAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGAATCAGGACATGGACTCCACCCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: EMPNRSATFSEVIPIGIRTWTPP*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGGTGGAGTCCATGT...CCTGATTCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGACTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: SREMPNRSATFSEVIPIGLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...TCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: CFSREMPNRSATFSEVIPHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...GGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: FSFSIKREVIFPGFPLSAVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...GGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: TSLTSCGRTIFLEGRLQFPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...AAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR CCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCATGGCCTTGTGGCCTaGGTGACCCAGGCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRHGLVA*VTQAAF
Trigger: AAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCAGCCCCATCACTCACCTaGCTAGAGTTTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSAPSLT*LEFPAV
Trigger: CACAGCTGGAAACTCTAGCCAGGTGAGTGATGGGGC...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333167.13
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TSLTSCGRTIFLEGRLQFPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...AAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCAGCCCATGATGTCAGGTaGGACCCCAACCACTGCATA +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSAHDVR*DPNHCI
Trigger: TATGCAGTGGTTGGGGTCCCACCTGACATCATGGGC...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGGGTATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACTTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RVFKDGSGSHSSPDAHGHFLQSY*DGIGRS
Trigger: GGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAA...GTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACTCCACCCTAGCACTCACTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: RSNISRVPSVSQGHGLHPSTHFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGTGAGTGCT...AGGGTGGAGTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR CCA 90 bp CCCAGATACTATATGAAGGAGCCACCTTACCTGCTTTTTGCAAAGCTACTGGGACCACCCTCATGCCCCTaGCAACAGCATGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PRYYMKEPPYLLFAKLLGPPSCP*QQHAGQ
Trigger: CTGCCCTGCATGCTGTTGCCAGGGGCATGAGGGTGG...TCCCAGTAGCTTTGCAAAAAGCAGGTAAGGTGGCTCCTTCATATAGTATCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440176.5
3UTR CAA 72 bp TGGCTAGAGTTTCCAGCTGTGGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WLEFPAVVEPSF*KAGFSLARPSM
Trigger: CATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGAAACTCTAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625927.3
CDS-3UTR TCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TATTCAAAGACGGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTTTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: YSKTAAAPIPVPMHMDTTLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...AGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCCGTCTTTGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTTTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCCAGGTCCAATGCCCATaGTGTCAGGTGGGACCCCAA +
Preference number: 4 (lower is better)
Translates to: TFSEVIPIGIRQSLAFSFQVQCP*CQVGPQ
Trigger: TTGGGGTCCCACCTGACATCATGGGCATTGGACCTG...GAAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCCCAGAGTACAGCACAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: HFYFAEGPGLFQVPRVQHRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...GTGCTGTACTCTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGGGCCCTCCATGGTGGTaGTGGGGCGGATACCCTCAT +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKGPPWW*WGGYPH
Trigger: ATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCC...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCAGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCGTGATGACCTGTCGTaGCCCAGTGCAGCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLRDDLS*PSAAQW
Trigger: CCACTGGGCTGCACTGGGGCACGACAGGTCATCACG...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTACTCACTGTCAGCCCTaGTTTTTGCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: TIFLEGRLQFGQALHGGATHCQP*FLQSYW
Trigger: CCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGT...AGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGACTCACTGTCAGCCCTaGTTTTTGCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQTHCQP*FLQSYW
Trigger: CCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATACTCACTGTCAGCCCTaGTTTTTGCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: DAPLGALVIMDRGGHRHNTHCQP*FLQSYW
Trigger: CCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGT...ATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATTGATCTCGAAGATGTCCACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAGACTCCACCCTGCTATaGTGGCCACTGCCTGTAGCC +
Preference number: 4 (lower is better)
Translates to: SLISKMSTSLTVSPAFCKDSTLL*WPLPVA
Trigger: GGCTACAGGCAGTGGCCAGCATAGCAGGGTGGAGTC...TTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACTGCCTGTAGCCCCGACGAACACTGTCTATTGACAGTGGACAAAGGCACAGTCCTCCCACTTCTACTTTaGAGAGGGGCCTGGTCTATT +
Preference number: 4 (lower is better)
Translates to: TACSPDEHCLLTVDKGTVLPLLL*RGAWSI
Trigger: AATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAG...GACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp ACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTATGTCACTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: TIFLEGRLQFGQALHGGAMSLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGTGACAT...AGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR CCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCATGTCACTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTMSLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGTGACAT...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
CDS-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SCFSREMPNRSATFSEVIGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: VSCFSREMPNRSATFSEVHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...AACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAGCTACTGGGATGGCATAGGCTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: HVTHCQPCFLQSYWDGIGCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GCCTATGCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTTTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISFLQSY*DGIGRS
Trigger: GGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAA...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ACTGCCTGTAGCCCCGACGAACACTGTCTATTGACAGTGGACAAAGGCACAGTCACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: TACSPDEHCLLTVDKGTVTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...GACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
CDS-3UTR TCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCTTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: IKREVIFPGFPLSARDMDHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...GTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000625927.3
CDS-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATCTCCGCCCACAGCTCTaGGAACAGACGCGAGCGACC +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHLRPQL*EQTRAT
Trigger: GGTCGCTCGCGTCTGTTCGCAGAGCTGTGGGCGGAG...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000411549.5
CDS-3UTR GCA 90 bp AATGGTGCCACTTCAGACCACTTAGATAGACTCAAAACCTCACTCTCCAGCCCTACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: NGATSDHLDRLKTSLSSPTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...AGGGCTGGAGAGTGAGGTTTTGAGTCTATCTAAGTGGTCTGAAGTGGCACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSNRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTATTTCTGATGCCACCTaGTATGCTGGCCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFISDAT*YAGHCL
Trigger: CAGGCAGTGGCCAGCATAGCAGGTGGCATCAGAAAT...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000333167.13
CDS-3UTR GCA 90 bp GAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGAATCAGGGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: EMPNRSATFSEVIPIGIRASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...CCTGATTCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: SGLLLLHQARSNISRVPSASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...AGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCCTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CFSREMPNRSATFSEVIPLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...GGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCCACCCCACAGGCCATaGCAATGTCATAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLPPHRP*QCHKTH
Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGG...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000333167.13
ENST00000452171.5
CDS-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGCAGCAGGATGGCAGCTaGCCCATCACTCACCTGGCT +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKQQDGS*PITHLA
Trigger: AGCCAGGTGAGTGATGGGGCAGCTGCCATCCTGCTG...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCTCAGCATGGCCATGGCCTaGTTTCTCATACCCCTACCC +
Preference number: 4 (lower is better)
Translates to: ILRGYPHRNQAISGLLLLSMAMA*FLIPLP
Trigger: GGGTAGGGGTATGAGAAAGCAGGCCATGGCCATGCT...GAGAAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR GCA 90 bp CTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGCTGGAAAGCACTCACTaGCCAGCAGTAACCACGAAA +
Preference number: 4 (lower is better)
Translates to: LAFSFSIKREVIFPGFPLLESTH*PAVTTK
Trigger: TTTCGTGGTTACTGCTGGGCAGTGAGTGCTTTCCAG...CAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR CCA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCATGTCACTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: INHGLVAWVTQAAFILHSMSLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGTGACAT...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
CDS-3UTR CCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGAGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCCTCCATGGTGGTGCTaGGGCGGATACCCTCATCCT +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLPPWWC*GGYPHP
Trigger: AGGATGAGGGTATCCGCCCCAGCACCACCATGGAGG...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTGTAGCGCCTCCAGCCTaGGACCTCACTCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSVAPPA*DLTQFP
Trigger: TGGGAACTGAGTGAGGTCCCAGGCTGGAGGCGCTAC...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCCAACTCTTCTGCCTTaGACCTCCGGGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELPTLLP*TSGPAG
Trigger: TCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SCFSREMPNRSATFSEVITNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...GATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCATAAGACCCATTTCTaGTGCCACCTGCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSHKTHF*CHLLCW
Trigger: CCAGCATAGCAGGTGGCATCAGAAATGGGTCTTATG...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000452171.5
CDS-3UTR TCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCAGCTAAAGAGGGTCTaGTGGGTGGCTCAACACCCC +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLQLKRV*WVAQHP
Trigger: GGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTG...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCT +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTTTCSL*IAQVNP
Trigger: AGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGT...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTGCTCTTGCTGCCTTCTaGTGGGAAGCCAGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSALAAF*WEARAK
Trigger: CTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAGAGC...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTCCTGTCGTGCCCCAGTaGAGCCCAGTGGGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLPVVPQ*SPVGAL
Trigger: TAGGGCACCCACTGGGCTGCACTGGGGCACGACAGG...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATAGCAGCAGGACTGTCTaGGTAGCGCCTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHSSRTV*VAPPAW
Trigger: CCAGGCTGGAGGCGCTACGCAGACAGTCCTGCTGCT...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCCTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: EPSFLKAGFSLARPSMVVFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...CACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCAGGTTCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RSQPSHFYFAEGPGLFQVHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...AACCTGGAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp ACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTCAGTTTCCACCCCACAGGCCATaGCAATGTCATAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: TSLTSCGRTIFLEGRLQFPPHRP*QCHKTH
Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGGTGG...AAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447223.5
CDS-3UTR CCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGATGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTGGCCAGGCCCTCCATaGTGGTGCTGGGGCGGATAC +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFAWPGPP*WCWGGY
Trigger: GTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGAGGGTCTGATGGGTaGCTCAACACCCCACCCACT +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMRGSDG*LNTPPT
Trigger: AGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GCAATCTCTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: AISGLLLLHQARSNISRVAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...AACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAGAGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATTTTTGCAAAGCTACTaGGATGGCATAGGCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSFLQSY*DGIGRS
Trigger: GGACCTGCCTATGCCATCCCAGTAGCTTTGCAAAAA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGC +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMILLLP*NAKPLS
Trigger: GCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGAT...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGATTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTCTTGGAAACAGCCCTTaGTCTGGGCTCTTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSLGNSP*SGLLLP
Trigger: AGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAG...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCTGGGTGACCCAGGCTaGTTTTATCTTGCACAGCTA +
Preference number: 4 (lower is better)
Translates to: HILRGYPHRNQAISGLLLLGDPG*FYLAQL
Trigger: TAGCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAG...AAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CCTGCTTTCTCATACCCCTACCCCGGACCAGTCTCACCAGCTGTGGTAGAACCATCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: PAFSYPYPGPVSPAVVEPSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...TGGTTCTACCACAGCTGGTGAGACTGGTCCGGGGTAGGGGTATGAGAAAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR GCA 90 bp CTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 4 (lower is better)
Translates to: LGHSDAPLGALVIMDRGGFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...ACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTATGTCACTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSMSLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGTGACAT...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
CDS-3UTR CCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCGGATACCCTCATCCTaGGTCACAGTGATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELRIPSS*VTVMLL
Trigger: GAGGAGCATCACTGTGACCCAGGATGAGGGTATCCG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGGCCCCATCACTCACCTaGCTAGAGTTTCCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELAPSLT*LEFPAV
Trigger: CACAGCTGGAAACTCTAGCCAGGTGAGTGATGGGGC...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000333167.13
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTGCCCATGATGTCAGGTaGGACCCCAACCACTGCATA +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLAHDVR*DPNHCI
Trigger: TATGCAGTGGTTGGGGTCCCACCTGACATCATGGGC...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGCTTTGCAGAGGGGCCTaGTCTATTCCAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMLCRGA*SIPGSQ
Trigger: CTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAG...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000411549.5
CDS-3UTR CCA 90 bp ATACTATATGAAGGAGCCACCTTACCTGCTTTTTGCAAAGCTACTGGGATGGCACTTTGCAGAGGGGCCTaGTCTATTCCAGGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILYEGATLPAFCKATGMALCRGA*SIPGSQ
Trigger: CTGGGAACCTGGAATAGACCAGGCCCCTCTGCAAAG...TGCCATCCCAGTAGCTTTGCAAAAAGCAGGTAAGGTGGCTCCTTCATATAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS-3UTR CCA 90 bp GAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGGAATCAGGGCAGTAACCACGAAATaGTGCCACTTCAGACCACTT +
Preference number: 4 (lower is better)
Translates to: EMPNRSATFSEVIPIGIRAVTTK*CHFRPL
Trigger: AAGTGGTCTGAAGTGGCACCATTTCGTGGTTACTGC...CCTGATTCCTATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418880.1
CDS-3UTR TCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATCATCCTGGGTCACAGTaGTGCTCCTCTTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHHPGSQ*CSSWCP
Trigger: AGGGCACCAAGAGGAGCATCACTGTGACCCAGGATG...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR TCA 90 bp CACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAGCTACTGGGATGGCATAGGCATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HVTHCQPCFLQSYWDGIGIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...GCCTATGCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATCTGCAGCCTCTGCATTaGGCAGGTCAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHLQPLH*AGQPCR
Trigger: TCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAG...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGG +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFANRGHD*REKLVG
Trigger: CCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTT...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: ALLLCPLHFSSMDLPCLKASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...CTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGAAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 4 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTCATCATGGACCGTGGTaGTCACAGGCACAATCTCAG +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSHHGPW*SQAQSQ
Trigger: CTGAGATTGTGCCTGTGACCACCACGGTCCATGATG...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTAGGCAGGCTTCAGTTTaGCCAGGCCCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLRQASV*PGPPWW
Trigger: CCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCT...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATCAGTCCCGATGCACATaGACACCACTCCGTATGCCC +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHQSRCT*TPLRMP
Trigger: GGGCATACGGAGTGGTGTCCATGTGCATCGGGACTG...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTTCCACCCTCAGAAACTaGGCGATTCGGGCCATGATT +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLSTLRN*AIRAMI
Trigger: AATCATGGCCCGAATCGCCCAGTTTCTGAGGGTGGA...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450296.5
CDS-3UTR TCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCATAAGACCCATTTCTaGTGCCACCTGCTATGCTGG +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELHKTHF*CHLLCW
Trigger: CCAGCATAGCAGGTGGCATCAGAAATGGGTCTTATG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000452171.5
CDS-3UTR TCA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCTTGCAAAGGCCTCATTaGTCTCGAAGATGTCCACGT +
Preference number: 4 (lower is better)
Translates to: CSHFPNELKCLDLSTATTLQRPH*SRRCPR
Trigger: ACGTGGACATCTTCGAGATCAATGAGGCCTTTGCAA...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR TCA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RINHGLVAWVTQAAFILHIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTAGGGCAAAGGTATCCTaGTTCTCCCGTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPRAKVS*FSREMP
Trigger: TGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGATTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HILRGYPHRNQAISGLLLRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...AAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CACGTCACTCACTGTCAGCCCTGCTTTTTGCAAAGCTACTGGGATGGCATAGGCTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 4 (lower is better)
Translates to: HVTHCQPCFLQSYWDGIGFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...GCCTATGCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGTGCCCTTGTCATCATaGACCGTGGTGGTCACAGGC +
Preference number: 4 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLVPLSS*TVVVTG
Trigger: GCCTGTGACCACCACGGTCCATGATGACAAGGGCAC...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp AATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACAT +
Preference number: 4 (lower is better)
Translates to: NSCTFTMPIALLIHGFALASPVK*QTAQPH
Trigger: ATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGC...CAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATGTAGGCAGCCTGGCTTaGAAAGGCCTCATTGATCTC +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHVGSLA*KGLIDL
Trigger: GAGATCAATGAGGCCTTTGCAAGCCAGGCTGCCTAC...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCCCATTCCAGTCCCGATaGACATGGACACCACTCCGT +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFAPFQSR*TWTPLR
Trigger: ACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGG...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGCTTTTGTGGTGTTACTaGCTTGCTGCTAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMLLWCY*LAARAA
Trigger: TGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAG...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTACTCACTGTCAGCCCTaGTTTTTGCAAAGCTACTGG +
Preference number: 4 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLTHCQP*FLQSYW
Trigger: CCAGTAGCTTTGCAAAAAGCAGGGCTGACAGTGAGT...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTCTTGCTGCCTTCTGCTaGGAAGCCAGGGCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLLAAFC*EARAKV
Trigger: TACCTTTGCCCTGGCTTCCCAGCAGAAGGCAGCAAG...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATGGCACAATCTCAGCTTaGAAACAGCCCTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHGTISA*KQPLLW
Trigger: CCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCC...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGTTATCCCACAGGCCATaGCAATGTCATAAGACCCAT +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMLSHRP*QCHKTH
Trigger: ATGGGTCTTATGACATTGGCATGGCCTGTGGGATAA...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301810.11
CDS-3UTR GCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTAGGCTGCTTTTATCTTaGACAGCTAAAGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSRLLLS*TAKEGL
Trigger: CAGACCCTCTTTAGCTGTGCAAGATAAAAGCAGCCT...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 4 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCGCAAAGCTACTGGGATaGCATAGGCAGGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFAAKLLG*HRQVQC
Trigger: GCATTGGACCTGCCTATGCCATCCCAGTAGCTTTGC...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp TATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTAAGAATTAACCATACGAACACTGTCTATTaGCAGTGGACAAAGGCACAG +
Preference number: 4 (lower is better)
Translates to: YAHCTSHPWICLALRINHTNTVY*QWTKAQ
Trigger: CTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGT...ATGGTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCCACCACCACCAGTGCTaGGTTTTCCCATGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFAHHHQC*VFPCGF
Trigger: AAAACCACATGGGAAAACTCAGCACTGGTGGTGGTG...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGTTTCCCATGTGGTTTTaGTTTTGTGGTGTTACTGCC +
Preference number: 4 (lower is better)
Translates to: STPHPLLYHVISVHIFQMFPMWF*FCGVTA
Trigger: GGCAGTAACACCACAAAAGCAAAACCACATGGGAAA...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCATGCACTTTTACTATaGCCATTGCACTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPHALLL*PLHFSS
Trigger: GGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CCA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTTGTCATCATGGACCGTaGTGGTCACAGGCACAATCT +
Preference number: 4 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLCHHGP*WSQAQS
Trigger: AGATTGTGCCTGTGACCACCACGGTCCATGATGACA...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR TCA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTATTTTCCAAATGAGTTaGAGTGCCTTGATCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSIFQMS*SALICP
Trigger: TGGACAGATCAAGGCACTTCAACTCATTTGGAAAAT...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ATAAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCCCAAATGAGTTGAAGTaGCTTGATCTGTCCACTGCC +
Preference number: 4 (lower is better)
Translates to: INSCTFTMPIALLIHGFAPNELK*LDLSTA
Trigger: GGCAGTGGACAGATCAAGGCACTTCAACTCATTTGG...GGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301810.11
ENST00000411549.5
ENST00000625927.3
CDS-3UTR GCA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCTCATCCATGGATTTaGCTTGCCTTAAGAATTAAC +
Preference number: 4 (lower is better)
Translates to: SCTFTMPIALLIHGFALPSHPWI*LALRIN
Trigger: GTTAATTCTTAAGGCAAGGCAAATCCATGGATGAGA...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR GCA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGTTTTACTATGCCCATTaGACTTCTCATCCATGGATT +
Preference number: 4 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELFYYAH*TSHPWI
Trigger: AATCCATGGATGAGAAGTGCAATGGGCATAGTAAAA...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS GCA 90 bp TTGAAGCCGCCGCGGCCCGCCCGGCAGATGGCCGTGCGCCGCCCGTaGACCACCACCACGTCCGCGGCCGAGGCCTGCGGGGCACCGCTC +
Preference number: 5 (lower is better)
Translates to: LKPPRPARQMAVRRP*TTTTSAAEACGAPL
Trigger: GAGCGGTGCCCCGCAGGCCTCGGCCGCGGACGTGGTGGTGGTGCACGGGCGGCGCACGGCCATCTGCCGGGCGGGCCGCGGCGGCTTCAA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000450296.5
ENST00000460424.5
ENST00000484284.5
ENST00000489559.1
ENST00000625927.3
CDS-3UTR CAA 90 bp AGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: RTPRMGRPNSSALDLRASSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...GCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: EGRLQFGQALHGGAGADTSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...GGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS GCA 90 bp GAATCGGCCGGACCCCTCAGGTGGCCCAGCACTACCTGCAGCCTCTaGATTGCGCAGGTCAACCCTGCAGACCAGCCACCAGTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: ESAGPLRWPSTTCSL*IAQVNPADQPPVRE
Trigger: TTCCCGGACTGGTGGCTGGTCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGCCGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000450296.5
ENST00000460424.5
ENST00000484284.5
ENST00000489559.1
ENST00000625927.3
CDS GCA 90 bp ATCCAGCCGGAATCGGCCGGACCCCTCAGGTGGCCCAGCACTACCTaGAGCCTCTGCATTGCGCAGGTCAACCCTGCAGACCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: IQPESAGPLRWPSTT*SLCIAQVNPADQPP
Trigger: TGGTGGCTGGTCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCACCTGAGGGGTCCGGCCGATTCCGGCTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000450296.5
ENST00000460424.5
ENST00000484284.5
ENST00000489559.1
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LILGHSDAPLGALVIMDRSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS GCA 90 bp CTGTTCCGGCCTCAGATTCACGTCCTTGAGAACCGCGGTCATGACTaGCGAGAGAAGCTCGTCGGGGGTGGTGTCCTTGAAGCCGCCGCG +
Preference number: 5 (lower is better)
Translates to: LFRPQIHVLENRGHD*REKLVGGGVLEAAA
Trigger: CGCGGCGGCTTCAAGGACACCACCCCCGACGAGCTTCTCTCGGCAGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAGGCCGGAACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000450296.5
ENST00000460424.5
ENST00000484284.5
ENST00000489559.1
ENST00000625927.3
CDS-3UTR CAA 90 bp GGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GQRYPASPVKCQTAQPHSSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...AGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PQDPKDGKAQLFCLGPPGPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...GCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGCGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS GCA 90 bp GTGGCCCAGCACTACCTGCAGCCTCTGCATTGCGCAGGTCAACCCTaGAGACCAGCCACCAGTCCGGGAACTGACCGCGGAGTTAACAGA +
Preference number: 5 (lower is better)
Translates to: VAQHYLQPLHCAGQP*RPATSPGTDRGVNR
Trigger: TCTGTTAACTCCGCGGTCAGTTCCCGGACTGGTGGCTGGTCTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGGTAGTGCTGGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000440176.5
ENST00000450296.5
ENST00000460424.5
ENST00000484284.5
ENST00000625927.3
CDS GCA 90 bp ACAGGAGTAGTGAGCTGTACGAGTCCACGATGGTGGTGGAAGGTGTaGTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGGGCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: TGVVSCTSPRWWWKV*SVRSPAPCGSGAKA
Trigger: AGCCTTGGCCCCGGAGCCGCAGGGTGCAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGGACTCGTACAGCTCACTACTCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS GCA 90 bp GGACATGGACTCCACCCTCAGAAACTGGGCGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAGCACATTTCCGACACAGATGTCCCC +
Preference number: 5 (lower is better)
Translates to: GHGLHPQKLGDSGHD*PGPRLQHISDTDVP
Trigger: GGGGACATCTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCCAGTTTCTGAGGGTGGAGTCCATGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450296.5
CDS CCA 90 bp ATGCTCCCCACAGGAGTAGTGAGCTGTACGAGTCCACGATGGTGGTaGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: MLPTGVVSCTSPRWW*KVCSVRSPAPCGSG
Trigger: CCCGGAGCCGCAGGGTGCAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGGACTCGTACAGCTCACTACTCCTGTGGGGAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS CCA 90 bp CCCCACATGCTCCCCACAGGAGTAGTGAGCTGTACGAGTCCACGATaGTGGTGGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGC +
Preference number: 5 (lower is better)
Translates to: PHMLPTGVVSCTSPR*WWKVCSVRSPAPCG
Trigger: GCCGCAGGGTGCAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGGACTCGTACAGCTCACTACTCCTGTGGGGAGCATGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS-3UTR CAA 90 bp TCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCATCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: SDGWLNTPPTPIPCHQCSSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...TGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: LAFSFSIKREVIFPGFPLSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...CAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGCAGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATGCCCTAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: GSGSHSSPDAHGHHSVCPKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...AGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS TCA 90 bp CCAGGGACATGGACTCCACCCTCAGAAACTGGGCGATTCGGGCCATaGTTGCCCCGGCCCCAGGCTGCAGCACATTTCCGACACAGATGT +
Preference number: 5 (lower is better)
Translates to: PGTWTPPSETGRFGP*LPRPQAAAHFRHRC
Trigger: ACATCTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCCAGTTTCTGAGGGTGGAGTCCATGTCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450296.5
CDS GCA 90 bp AGAACCACATCTCAGCCTCCAAGGCCTCAACTCCGCCCACAGCTCTaGGAACAGACGCGAGCGACCCTCCAAAAGTCCCGTCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: RTTSQPPRPQLRPQL*EQTRATLQKSRPPP
Trigger: TGGAGGTGGACGGGACTTTTGGAGGGTCGCTCGCGTCTGTTCGCAGAGCTGTGGGCGGAGTTGAGGCCTTGGAGGCTGAGATGTGGTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000411549.5
CDS GCA 90 bp AGTCTCCGGGATGTCACTCAGAAACTGGGCGATTCGGGCCATGATTaGCCCGGCCCCAGGCTGCAGCACATTTCCGACACAGATGTCCCC +
Preference number: 5 (lower is better)
Translates to: SLRDVTQKLGDSGHD*PGPRLQHISDTDVP
Trigger: GGGGACATCTGTGTCGGAAATGTGCTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCCAGTTTCTGAGTGACATCCCGGAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000421218.1
CDS CCA 90 bp CACATGCTCCCCACAGGAGTAGTGAGCTGTACGAGTCCACGATGGTaGTGGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTGCGGCTCC +
Preference number: 5 (lower is better)
Translates to: HMLPTGVVSCTSPRW*WKVCSVRSPAPCGS
Trigger: GGAGCCGCAGGGTGCAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGGACTCGTACAGCTCACTACTCCTGTGGGGAGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS-3UTR CAA 90 bp TGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: WPGPPWWCWGGYPHPGSQRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS CCA 90 bp TCTGTGCCTGGGGCAGCCCACTCTTCCATGTGTTGCTCTGAGCTCTaGGGCTGGAGCCCTGACCTGGCTAAGCCAATGGATCTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: SVPGAAHSSMCCSEL*GWSPDLAKPMDLQQ
Trigger: CTGCTGAAGATCCATTGGCTTAGCCAGGTCAGGGCTCCAGCCCCAGAGCTCAGAGCAACACATGGAAGAGTGGGCTGCCCCAGGCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS-3UTR CAA 90 bp GGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCATCCAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GFSLARPSMVVLGRIPSSRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...GGATGAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: QDPKDGKAQLFCLGPPGQTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...CTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCCCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SWTVVVTGTISAWKQPLLPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...GAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCACCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WEARAKVSCFSREMPNRSPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CCTCAGGACCCCAAGGATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCTGTCAGCCCTGCTTTTaGCAAAGCTACTGGGATGGC +
Preference number: 5 (lower is better)
Translates to: PQDPKDGKAQLFCLGPPGCQPCF*QSYWDG
Trigger: GCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACA...GCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCATCCTTGGGGTCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGCCACCTTACCTGCTTTTaGCAAAGCTACTGGGATGGC +
Preference number: 5 (lower is better)
Translates to: GKAQLFCLGPPGQQDGSCHLTCF*QSYWDG
Trigger: GCCATCCCAGTAGCTTTGCAAAAAGCAGGTAAGGTG...GCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS TCA 90 bp AGGCACAGTCTCCGGGATGTCACCTGCAGGCGCTTAAAGGAAAGTTaGCCAGGTCTCCTCCTGAGGGTCCTCCTTCCCCATGGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RHSLRDVTCRRLKES*PGLLLRVLLPHGSA
Trigger: GGCAGAACCATGGGGAAGGAGGACCCTCAGGAGGAGACCTGGTCAACTTTCCTTTAAGCGCCTGCAGGTGACATCCCGGAGACTGTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480865.5
CDS TCA 90 bp CTGCTATGCTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAGTCTCCGGGATGTCACCTGCAGGCG +
Preference number: 5 (lower is better)
Translates to: LLCWPLPVAPTNTVY*QWTKAQSPGCHLQA
Trigger: CGCCTGCAGGTGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAGCATAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480865.5
CDS GCA 90 bp CCACGATGGTGGTGGAAGGTGTGCTCGGTGAGAAGTCCTGCACCCTaGGGCTCCGGGGCCAAGGCTCATTTTCCAAATGAGTTGAAGTGC +
Preference number: 5 (lower is better)
Translates to: PRWWWKVCSVRSPAP*GSGAKAHFPNELKC
Trigger: GCACTTCAACTCATTTGGAAAATGAGCCTTGGCCCCGGAGCCGCAGGGTGCAGGACTTCTCACCGAGCACACCTTCCACCACCATCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS CCA 90 bp CCTGGGGCAGCCCACTCTTCCATGTGTTGCTCTGAGCTCTGGGGCTaGAGCCCTGACCTGGCTAAGCCAATGGATCTTCAGCAGTGCTTT +
Preference number: 5 (lower is better)
Translates to: PGAAHSSMCCSELWG*SPDLAKPMDLQQCF
Trigger: AAAGCACTGCTGAAGATCCATTGGCTTAGCCAGGTCAGGGCTCCAGCCCCAGAGCTCAGAGCAACACATGGAAGAGTGGGCTGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS CCA 90 bp TGCCTGGTGTGTGTCTCTTCCAGAAGGGTGAGCCAATCCCAGCTGTaGGGTCAGGAAGGGCTTGAAGTATGGGACACTAGCCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: CLVCVSSRRVSQSQL*GQEGLEVWDTSLPH
Trigger: GTGGGGCAGGCTAGTGTCCCATACTTCAAGCCCTTCCTGACCCCACAGCTGGGATTGGCTCACCCTTCTGGAAGAGACACACACCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469559.5
ENST00000469600.1
CDS-3UTR CAA 90 bp ATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCCCTGCAGCCTCTGCATaGCGCAGGTCAACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: MRRSQPSHFYFAEGPGLFPAASA*RRSTLQ
Trigger: CTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGG...GAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CAA 90 bp ATGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: MGRPNSSALDLRASRMAALRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...AGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCCCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: INHGLVAWVTQAAFILHSPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS GCA 90 bp TGGGGCTGGAGCCCTGACCTGGCTAAGCCAATGGATCTTCAGCAGTaGTTTGCTCAGCTCCCCCGCCCTTTGATGCCCTCATTCCATCAT +
Preference number: 5 (lower is better)
Translates to: WGWSPDLAKPMDLQQ*FAQLPRPLMPSFHH
Trigger: ATGATGGAATGAGGGCATCAAAGGGCGGGGGAGCTGAGCAAAGCACTGCTGAAGATCCATTGGCTTAGCCAGGTCAGGGCTCCAGCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS GCA 90 bp ACCCTGGCCTCCCACTTGGGCACACACACGGTGACAGATGCCCACTaGAGGCTAGTATCCCTTTCAAGGCTGGCCCTTAAGGAAAACAGG +
Preference number: 5 (lower is better)
Translates to: TLASHLGTHTVTDAH*RLVSLSRLALKENR
Trigger: CCTGTTTTCCTTAAGGGCCAGCCTTGAAAGGGATACTAGCCTGCAGTGGGCATCTGTCACCGTGTGTGTGCCCAAGTGGGAGGCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS GCA 90 bp CCTCCAGACCAGGCTGACCCAGAAGGACGTCATGGACAAGTAGGATaGAAAACCATCAGACCAGATCTGTGGGCAAGCGGTACCCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPDQADPEGRHGQVG*KTIRPDLWASGTLA
Trigger: GGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGTCAGCCTGGTCTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS GCA 90 bp CCTCCTGTGAGCCCTGCTGTCACCCCAGAGAGGTGGAACAGTGATTaGCGACCTAGGGGTGGCATCCGCTGGATAAGACTCTTGCCATAT +
Preference number: 5 (lower is better)
Translates to: PPVSPAVTPERWNSD*RPRGGIRWIRLLPY
Trigger: ATATGGCAAGAGTCTTATCCAGCGGATGCCACCCCTAGGTCGGCAATCACTGTTCCACCTCTCTGGGGTGACAGCAGGGCTCACAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS CCA 90 bp GGACGTCATGGACAAGTAGGATGCAAAACCATCAGACCAGATCTGTaGGCAAGCGGTACCCTGGCCTCCCACTTGGGCACACACACGGTG +
Preference number: 5 (lower is better)
Translates to: GRHGQVGCKTIRPDL*ASGTLASHLGTHTV
Trigger: CACCGTGTGTGTGCCCAAGTGGGAGGCCAGGGTACCGCTTGCCCACAGATCTGGTCTGATGGTTTTGCATCCTACTTGTCCATGACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS-3UTR CAA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTCGGGGGTGGTGTCCTaGAAGCCGCCGCGGCCCGCC +
Preference number: 5 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSSGVVS*KPPRPA
Trigger: GGCGGGCCGCGGCGGCTTCAAGGACACCACCCCCGA...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: WEGPTLLPWTSGPAGWQLDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...CAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: EPSFLKAGFSLARPSMVVPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...CACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATGAGGAGATCCCAGCCCTCCCACTTCTACTTTGCAGAGGGGCCTGGTCTATTCGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: MRRSQPSHFYFAEGPGLFAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...GAATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGGGCTGGGATCTCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CAA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: SAGKPGQRYPASPVKCQTAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...GGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAACCATCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: EPSFLKAGFSLARPSMVVKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...CACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGATGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: MLLLVPLSSWTVVVTGTIKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...GATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGGAAGGCCCAACTCTTCTGCCTTGGACCTCCGGGCCAGCAGGATGGCAGCTGCCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GKAQLFCLGPPGQQDGSCHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...GCAGCTGCCATCCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGGCCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCCTCCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: GRLQFGQALHGGAGADTLHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...GAGGGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS TCA 90 bp GTTCACCTTCTGTATTTGTTCTCTCCAGGGCCCCAGGCAATTAGCTaGTGCCTGCCAACACTGAGGGCGGATCTTCCCCACCTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: VHLLYLFSPGPQAIS*CLPTLRADLPHLVH
Trigger: GTGGACCAGGTGGGGAAGATCCGCCCTCAGTGTTGGCAGGCATCAGCTAATTGCCTGGGGCCCTGGAGAGAACAAATACAGAAGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS TCA 90 bp CAGCCATACAACAGCTTGTCCTGGTCATCCACCAGCTCCTGTCCCTaGGGGTCCCACGCTCACTTGCCCATGCACCCAGCTTTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: QPYNSLSWSSTSSCP*GSHAHLPMHPAFPN
Trigger: ATTTGGAAAAGCTGGGTGCATGGGCAAGTGAGCGTGGGACCCTCAGGGACAGGAGCTGGTGGATGACCAGGACAAGCTGTTGTATGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS GCA 90 bp CTCAGAAACTGGGCGATTCGGGCCATGATTGCCCCGGCCCCAGGCTaGAGCACATTTCCTGTGGACAACAAACTTTCATTCAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRNWAIRAMIAPAPG*STFPVDNKLSFSAR
Trigger: CCTGGCACTGAATGAAAGTTTGTTGTCCACAGGAAATGTGCTGCAGCCTGGGGCCGGGGCAATCATGGCCCGAATCGCCCAGTTTCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS GCA 90 bp GGGGAGAGGTTGAGTCCACAAGAGCAGGGAGCCAAGGACTCTCGTTaGCTCATTCTGGTGTCCAACCTTATCCTCCCCAACCTGCACACT +
Preference number: 5 (lower is better)
Translates to: GERLSPQEQGAKDSR*LILVSNLILPNLHT
Trigger: AGTGTGCAGGTTGGGGAGGATAAGGTTGGACACCAGAATGAGGCAACGAGAGTCCTTGGCTCCCTGCTCTTGTGGACTCAACCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484284.5
CDS CCA 90 bp ACTAGCCCTTGGCAGGCTCACTTGCAACTCTGGAACATCAGGGTTTaGGGCAGGGAGAGCCAGCCATACAACAGCTTGTCCTGGTCATCC +
Preference number: 5 (lower is better)
Translates to: TSPWQAHLQLWNIRV*GRESQPYNSLSWSS
Trigger: GGATGACCAGGACAAGCTGTTGTATGGCTGGCTCTCCCTGCCCCAAACCCTGATGTTCCAGAGTTGCAAGTGAGCCTGCCAAGGGCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS-3UTR CAA 90 bp GCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCACCTGCAGCCTCTGCATaGCGCAGGTCAACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: AKVSCFSREMPNRSATFSPAASA*RRSTLQ
Trigger: CTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGG...TGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: LVIMDRGGHRHNLSLETAPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...GGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCGGATACCGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: EGRLQFGQALHGGAGADTVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...GGTATCCGCCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCCGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: HHGPWWSQAQSQLGNSPCRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...GCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCCCAACTCTTCTGCCTaGGACCTCCGGGCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GGSTPHPLLYHVISVHIFPNSSA*DLRASR
Trigger: CCTGCTGGCCCGGAGGTCCAAGGCAGAAGAGTTGGG...GAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS TCA 90 bp CTGCTATGCTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAGTCTCCGGGATGTCACGACACAGAT +
Preference number: 5 (lower is better)
Translates to: LLCWPLPVAPTNTVY*QWTKAQSPGCHDTD
Trigger: ATCTGTGTCGTGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAGCATAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418880.1
ENST00000625927.3
CDS GCA 90 bp TCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATaGCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCACAGGCCA +
Preference number: 5 (lower is better)
Translates to: SAGKPGQRYPASPVK*QTAQPHSQRLSHRP
Trigger: TGGCCTGTGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000421218.1
CDS-3UTR CAA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTGCAGCCTCTGCATaGCGCAGGTCAACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFPAASA*RRSTLQ
Trigger: CTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: GKPGQRYPASPVKCQTAQLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...CTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: RAKVSCFSREMPNRSATFLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...GAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: CWEARAKVSCFSREMPNRTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...GCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCTTTCTTGAAGGCAGGCTTCAGTTTGGCCAGGCCCTCCATGGTGGTGCTGGGGCTTGCAAAGGCCTCATaGATCTCGAAGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: SFLKAGFSLARPSMVVLGLAKAS*ISKMST
Trigger: CGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAG...CCCCAGCACCACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTTCAAGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGCCGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: INHGLVAWVTQAAFILHSRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...GCTGTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ACAATCTCAGCTTGGAAACAGCCCTTGCTCTGGGCTCTTGCTGCCTTCTGCTGGTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: TISAWKQPLLWALAAFCWCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...CCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGCTGAGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAACCGCTCATGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: WEARAKVSCFSREMPNRSCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...TGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTTGGAAACAGCCCTTGCTCCCTCCCACTTCTACTTaGCAGAGGGGCCTGGTCTAT +
Preference number: 5 (lower is better)
Translates to: SWTVVVTGTISAWKQPLLPPTST*QRGLVY
Trigger: ATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGG...GAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCTGTGACCACCACGGTCCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS TCA 90 bp CTGCTATGCTGGCCACTGCCTGTAGCCCCGACGAACACTGTCTATTaGCAGTGGACAAAGGCACAGTCTCCGGGATGTCACTCAGAAACT +
Preference number: 5 (lower is better)
Translates to: LLCWPLPVAPTNTVY*QWTKAQSPGCHSET
Trigger: AGTTTCTGAGTGACATCCCGGAGACTGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTCGGGGCTACAGGCAGTGGCCAGCATAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000421218.1
ENST00000440176.5
ENST00000447223.5
ENST00000465181.1
CDS TCA 90 bp TGCCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTaGAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCACA +
Preference number: 5 (lower is better)
Translates to: CLLLGSQGKGILLLP*NAKPLSHILRGYPT
Trigger: TGTGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301810.11
ENST00000421218.1
CDS GCA 90 bp AGCGGCTCCCATTCCAGTCCCGATGCACATGGACACCACTCCGTATaGCCTGTGAAAACAAAACTTAATTGGCTGGGCAAAGGCACCCAC +
Preference number: 5 (lower is better)
Translates to: SGSHSSPDAHGHHSV*PVKTKLNWLGKGTH
Trigger: GTGGGTGCCTTTGCCCAGCCAATTAAGTTTTGTTTTCACAGGGCATACGGAGTGGTGTCCATGTGCATCGGGACTGGAATGGGAGCCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS CCA 90 bp ACCAGAGATGAGGCATTCCAGATCTTTCTTCGGGACACTAGCCCTTaGCAGGCTCACTTGCAACTCTGGAACATCAGGGTTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: TRDEAFQIFLRDTSP*QAHLQLWNIRVWGR
Trigger: CCTGCCCCAAACCCTGATGTTCCAGAGTTGCAAGTGAGCCTGCCAAGGGCTAGTGTCCCGAAGAAAGATCTGGAATGCCTCATCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS-3UTR CAA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: LAFSFSIKREVIFPGFPLLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...CAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: LLVPLSSWTVVVTGTISATVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...AGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS GCA 90 bp ACTCTCGTTGCCTCATTCTGGTGTCCAACCTTATCCTCCCCAACCTaGACACTGAGTTTCCTGGGGCCTGGGCCCAGTAAAGTGTCAAAA +
Preference number: 5 (lower is better)
Translates to: TLVASFWCPTLSSPT*TLSFLGPGPSKVSK
Trigger: TTTTGACACTTTACTGGGCCCAGGCCCCAGGAAACTCAGTGTGCAGGTTGGGGAGGATAAGGTTGGACACCAGAATGAGGCAACGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484284.5
CDS-3UTR CAA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCCTGCAGCCTCTGCATaGCGCAGGTCAACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: CSHFPNELKCLDLSTATTPAASA*RRSTLQ
Trigger: CTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: SWVTVMLLLVPLSSWTVVDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...CACCACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: FSFSIKREVIFPGFPLSALLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...GGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCATACCCCTACCCCGGACCAGTCTCACCAGCTGTGGTAGAACCATCTTTCTTACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: LIPLPRTSLTSCGRTIFLTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...AAGAAAGATGGTTCTACCACAGCTGGTGAGACTGGTCCGGGGTAGGGGTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000440176.5
CDS-3UTR CAA 90 bp GCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCCTTGCAAAGGCCTCATaGATCTCGAAGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: AKEGLMGGSTPHPLLYHVLAKAS*ISKMST
Trigger: CGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAG...GACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: GWLNTPPTPIPCHQCSHFRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...AAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATCCTCCCACTTCTACTTaGCAGAGGGGCCTGGTCTAT +
Preference number: 5 (lower is better)
Translates to: LHQARSNISRVPSVSQGHPPTST*QRGLVY
Trigger: ATAGACCAGGCCCCTCTGCAAAGTAGAAGTGGGAGG...ATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440176.5
CDS TCA 90 bp CAGCCTGGGCGCCTGAGTAAGACCCTGTCTCAACAAACCAACCTGTaGTGGGTCACCACTGCACAAGTAGTCAACCAAAGAACCAAGATC +
Preference number: 5 (lower is better)
Translates to: QPGRLSKTLSQQTNL*WVTTAQVVNQRTKI
Trigger: GATCTTGGTTCTTTGGTTGACTACTTGTGCAGTGGTGACCCATCACAGGTTGGTTTGTTGAGACAGGGTCTTACTCAGGCGCCCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS TCA 90 bp AATTGGCTGGGCAAAGGCACCCACCAAATTACCTCCAGACCAGGCTaGCCCAGAAGGACGTCATGGACAAGTAGGATGCAAAACCATCAG +
Preference number: 5 (lower is better)
Translates to: NWLGKGTHQITSRPG*PRRTSWTSRMQNHQ
Trigger: CTGATGGTTTTGCATCCTACTTGTCCATGACGTCCTTCTGGGTCAGCCTGGTCTGGAGGTAATTTGGTGGGTGCCTTTGCCCAGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS GCA 90 bp GAGAAAAGGAACTGCTGCTGGGACAGAGCACCAGAGCAAAAGAAATaGCTAAAGTCTGAGGCCAGGGACCACTCGGCCTTACCAGTAATC +
Preference number: 5 (lower is better)
Translates to: EKRNCCWDRAPEQKK*LKSEARDHSALPVI
Trigger: GATTACTGGTAAGGCCGAGTGGTCCCTGGCCTCAGACTTTAGGCATTTCTTTTGCTCTGGTGCTCTGTCCCAGCAGCAGTTCCTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS GCA 90 bp GATCTTCCCCACCTGGTCCACTCAGATGCACACACTAACCTCCTCTaGAAACACCGTCACAGACACACCCAAAGCAATGCTTTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: DLPHLVHSDAHTNLL*KHRHRHTQSNALSG
Trigger: ACCTGACAAAGCATTGCTTTGGGTGTGTCTGTGACGGTGTTTGCAGAGGAGGTTAGTGTGTGCATCTGAGTGGACCAGGTGGGGAAGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS-3UTR CAA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCCTGCAGCCTCTGCATaGCGCAGGTCAACCCTGCAG +
Preference number: 5 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELPAASA*RRSTLQ
Trigger: CTGCAGGGTTGACCTGCGCAATGCAGAGGCTGCAGG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: IKREVIFPGFPLSARDMDLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...GTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCCTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCTTGGTGCCCTTGTCATCATGGACCGTGGTGGTCACAGGCACAATCTCAGCTGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: LLVPLSSWTVVVTGTISADEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...AGCTGAGATTGTGCCTGTGACCACCACGGTCCATGATGACAAGGGCACCAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: CSHFPNELKCLDLSTATTPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: CSHFPNELKCLDLSTATTAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTGATCTGTCCACTGCCACCACCACCAGTGCTGAGTTTTCCCATGTGGTTTTGCAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LICPLPPPPVLSFPMWFCRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...GCAAAACCACATGGGAAAACTCAGCACTGGTGGTGGTGGCAGTGGACAGATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: VAQHPTHSYTMSSVFTFSCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...GGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGATGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CATGGTGGTGCTGGGGCGGATACCCTCATCCTGGGTCACAGTGATGCTCCTCTTCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: HGGAGADTLILGHSDAPLHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...AAGAGGAGCATCACTGTGACCCAGGATGAGGGTATCCGCCCCAGCACCACCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTGTCAGCCCTGCTTTTaGCAAAGCTACTGGGATGGC +
Preference number: 5 (lower is better)
Translates to: DGWLNTPPTPIPCHQCSHCQPCF*QSYWDG
Trigger: GCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACA...ATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAATTAACCATGGCCTTGTGGCCTGGGTGACCCAGGCTGCTTTTATCTTGCACTGTCAGCCCTGCTTTTaGCAAAGCTACTGGGATGGC +
Preference number: 5 (lower is better)
Translates to: RINHGLVAWVTQAAFILHCQPCF*QSYWDG
Trigger: GCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACA...GTGCAAGATAAAAGCAGCCTGGGTCACCCAGGCCACAAGGCCATGGTTAATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS TCA 90 bp AGCCAATGGATCTTCAGCAGTGCTTTGCTCAGCTCCCCCGCCCTTTaGTGCCCTCATTCCATCATTAAGGATTGCATTGCACGTAACCTG +
Preference number: 5 (lower is better)
Translates to: SQWIFSSALLSSPAL*CPHSIIKDCIARNL
Trigger: CAGGTTACGTGCAATGCAATCCTTAATGATGGAATGAGGGCATCAAAGGGCGGGGGAGCTGAGCAAAGCACTGCTGAAGATCCATTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000451419.1
CDS TCA 90 bp CTGCTGCTGGGACAGAGCACCAGAGCAAAAGAAATGCCTAAAGTCTaGGGCCAGGGACCACTCGGCCTTACCAGTAATCATATAGCTAAC +
Preference number: 5 (lower is better)
Translates to: LLLGQSTRAKEMPKV*GQGPLGLTSNHIAN
Trigger: GTTAGCTATATGATTACTGGTAAGGCCGAGTGGTCCCTGGCCTCAGACTTTAGGCATTTCTTTTGCTCTGGTGCTCTGTCCCAGCAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS-3UTR CAA 90 bp TTATCTTGCACAGCTAAAGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: LSCTAKEGLMGGSTPHPLDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...GAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCTTTAGCTGTGCAAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGCTTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: CFSREMPNRSATFSEVIPDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...GGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: STPHPLLYHVISVHIFQMPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TPHPLLYHVISVHIFQMSAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...ACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCTGGCCTTCTCCTTCTCCATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SGLLLLHQARSNISRVPSRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...AGAGGGAACCCTGGAAATATTACTTCGCGCTTGATGGAGAAGGAGAAGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CACCTGGCTAGAGTTTCCAGCTGTGGTAGAACCATCTTTCTTGAAGGCAGGCTTAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: HLARVSSCGRTIFLEGRLRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...AAGCCTGCCTTCAAGAAAGATGGTTCTACCACAGCTGGAAACTCTAGCCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: VVLLLWCYCLAARAAGLSTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...AGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: SCTFTMPIALLIHGFALPKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGAAGGCAGGCTTCAGTTaGGCCAGGCCCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELKAGFS*ARPSMV
Trigger: CACCATGGAGGGCCTGGCCAAACTGAAGCCTGCCTT...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CATGATGTCAGGTGGGACCCCAACCACTGCATAAGACCTCAGGACCCCAAGGATGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HDVRWDPNHCIRPQDPKDVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...ATCCTTGGGGTCCTGAGGTCTTATGCAGTGGTTGGGGTCCCACCTGACATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CTCATCCTGGGTCACAGTGATGCTCCTCTTGGTGCCCTTGTCATCATGGACCGTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: LILGHSDAPLGALVIMDRVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...ACGGTCCATGATGACAAGGGCACCAAGAGGAGCATCACTGTGACCCAGGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000411549.5
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AGAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: RGSDGWLNTPPTPIPCHQHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...CTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CCTTCTGCTGGGAAGCCAGGGCAAAGGTATCCTGCTTCTCCCGTGAAATGCCAAATAAGAAACTCCATGTaGATCGACACAGATGTCCCC +
Preference number: 5 (lower is better)
Translates to: PSAGKPGQRYPASPVKCQIRNSM*IDTDVP
Trigger: GGGGACATCTGTGTCGATCAACATGGAGTTTCTTAT...TTGGCATTTCACGGGAGAAGCAGGATACCTTTGCCCTGGCTTCCCAGCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
CDS GCA 90 bp CCCAGGCTGCAGCACATTTCCTGTGGACAACAAACTTTCATTCAGTaGCAGGCGGTGGTGTTCTGGGCACTAAAGTATAGCTGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: PRLQHISCGQQTFIQ*QAVVFWALKYSCEN
Trigger: GTTTTCACAGCTATACTTTAGTGCCCAGAACACCACCGCCTGGCACTGAATGAAAGTTTGTTGTCCACAGGAAATGTGCTGCAGCCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS CCA 90 bp CCAGAGAGGTGGAACAGTGATTGCCGACCTAGGGGTGGCATCCGCTaGATAAGACTCTTGCCATATCATATTGCTGTATTTCAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PERWNSDCRPRGGIR*IRLLPYHIAVFQGE
Trigger: CTCACCTTGAAATACAGCAATATGATATGGCAAGAGTCTTATCCAGCGGATGCCACCCCTAGGTCGGCAATCACTGTTCCACCTCTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465181.1
CDS-3UTR CAA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: STPHPLLYHVISVHIFQMLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCTCCTCTTGGTGCCCTaGTCATCATGGACCGTGGTG +
Preference number: 5 (lower is better)
Translates to: SCTFTMPIALLIHGFALPLLLVP*SSWTVV
Trigger: CACCACGGTCCATGATGACAAGGGCACCAAGAGGAG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTTGCAAAGGCCTCATaGATCTCGAAGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGLAKAS*ISKMST
Trigger: CGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAG...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTCGGCGCTTCAGCTCATaGAGCAGCGTGATGACCTGT +
Preference number: 5 (lower is better)
Translates to: SCTFTMPIALLIHGFALPRRFSS*SSVMTC
Trigger: ACAGGTCATCACGCTGCTCAATGAGCTGAAGCGCCG...AGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp GAGGGTCTGATGGGTGGCTCAACACCCCACCCACTCCTATACCATGTCATCAGTCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: EGLMGGSTPHPLLYHVISHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...ACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGAGCCACCCATCAGACCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATTGATCTCGAAGATGTCCACGTCACTCACTGTCAGCCCTGCTTTTTGCAAACTCAGATTCACGTCCTaGAGAACCGCGGTCATGACT +
Preference number: 5 (lower is better)
Translates to: SLISKMSTSLTVSPAFCKLRFTS*RTAVMT
Trigger: AGTCATGACCGCGGTTCTCAAGGACGTGAATCTGAG...TTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTCTCCCGTGAAATGCCAAACCGCTCAGCCACATTCTCAGAGGTTATCCCCATAGACGAACACTGTCTATaGACAGTGGACAAAGGCACA +
Preference number: 5 (lower is better)
Translates to: FSREMPNRSATFSEVIPIDEHCL*TVDKGT
Trigger: TGTGCCTTTGTCCACTGTCAATAGACAGTGTTCGTC...TATGGGGATAACCTCTGAGAATGTGGCTGAGCGGTTTGGCATTTCACGGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000411549.5
ENST00000418880.1
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: NSCTFTMPIALLIHGFALPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...CAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ATCAAGCGCGAAGTAATATTTCCAGGGTTCCCTCTGTCAGCCAGGGACATGGACGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: IKREVIFPGFPLSARDMDVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...GTCCATGTCCCTGGCTGACAGAGGGAACCCTGGAAATATTACTTCGCGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000440176.5
ENST00000447223.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCATTGATCTCGAAGATGTCCACGTCACTCACTGTCAGCCCTGCTTTTTGCAAATGTCAGCCCTGCTTTTaGCAAAGCTACTGGGATGGC +
Preference number: 5 (lower is better)
Translates to: SLISKMSTSLTVSPAFCKCQPCF*QSYWDG
Trigger: GCCATCCCAGTAGCTTTGCAAAAAGCAGGGCTGACA...TTTGCAAAAAGCAGGGCTGACAGTGAGTGACGTGGACATCTTCGAGATCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTCCTTGCTCTGGGCTCTaGCTGCCTTCTGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLPCSGL*LPSAGK
Trigger: CTTCCCAGCAGAAGGCAGCAAGAGCCCAGAGCAAGG...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCTTGGAAACAGCCCTaGCTCTGGGCTCTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLAWKQP*LWALAA
Trigger: GGCAGCAAGAGCCCAGAGCAAGGGCTGTTTCCAAGC...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCAACACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGGCACAATCTCAGCTaGGAAACAGCCCTTGCTCTG +
Preference number: 5 (lower is better)
Translates to: STPHPLLYHVISVHIFQMRHNLS*ETALAL
Trigger: CAGAGCAAGGGCTGTTTCCAAGCTGAGATTGTGCCT...CATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTACAGTGATGCTCCTCTaGGTGCCCTTGTCATCATGG +
Preference number: 5 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLTVMLL*VPLSSW
Trigger: CCATGATGACAAGGGCACCAAGAGGAGCATCACTGT...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TCCCATGTGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGAGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: SHVVLLLWCYCLAARAAGVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...TCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCACATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCGTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: FCFCGVTALLLEQQDCLRVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...ACGCAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGTTCACATTTTCCAAATGAGTTGAAGTGCCTTGATCTGTCCACTGCCACCACCCTTGCAAAGGCCTCATaGATCTCGAAGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: CSHFPNELKCLDLSTATTLAKAS*ISKMST
Trigger: CGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAG...GGTGGTGGCAGTGGACAGATCAAGGCACTTCAACTCATTTGGAAAATGTGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS CCA 90 bp CTCACTACCTCTGGACCAGCCAAGACCTTAGGGACTTTGATCTTTTaGGATTTCAACATTTGGGATTATGGTGCTCAGGACTGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: LTTSGPAKTLGTLIF*DFNIWDYGAQDCVC
Trigger: ACAGACACAGTCCTGAGCACCATAATCCCAAATGTTGAAATCCCAAAAGATCAAAGTCCCTAAGGTCTTGGCTGGTCCAGAGGTAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS-3UTR CAA 90 bp ACCCCACCCACTCCTATACCATGTCATCAGTGTTCACATTTTCCAAATGAGTTGCTTGCAAAGGCCTCATaGATCTCGAAGATGTCCACG +
Preference number: 5 (lower is better)
Translates to: TPPTPIPCHQCSHFPNELLAKAS*ISKMST
Trigger: CGTGGACATCTTCGAGATCAATGAGGCCTTTGCAAG...CAACTCATTTGGAAAATGTGAACACTGATGACATGGTATAGGAGTGGGTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp TGGTTTTGCTTTTGTGGTGTTACTGCCTTGCTGCTAGAGCAGCAGGACTGTCTGCATTTTCCAAATGAGTaGAAGTGCCTTGATCTGTCC +
Preference number: 5 (lower is better)
Translates to: WFCFCGVTALLLEQQDCLHFPNE*KCLDLS
Trigger: GGACAGATCAAGGCACTTCAACTCATTTGGAAAATG...CAGACAGTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACAAAAGCAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000452171.5
ENST00000625927.3
CDS-3UTR CAA 90 bp ACATTCTCAGAGGTTATCCCCATAGGAATCAGGCAATCTCTGGCCTTCTCCTTCATAAGAAACTCCATGTaGATCGACACAGATGTCCCC +
Preference number: 5 (lower is better)
Translates to: TFSEVIPIGIRQSLAFSFIRNSM*IDTDVP
Trigger: GGGGACATCTGTGTCGATCAACATGGAGTTTCTTAT...GAAGGAGAAGGCCAGAGATTGCCTGATTCCTATGGGGATAACCTCTGAGAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440176.5
ENST00000447223.5
CDS-3UTR CAA 90 bp AAATTCATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTTGTGGTGTTACTGCCTaGCTGCTAGAGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: KFMHFYYAHCTSHPWICLCGVTA*LLEQQD
Trigger: GTCCTGCTGCTCTAGCAGCAAGGCAGTAACACCACA...AAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000625927.3
CDS CCA 90 bp CCAGCCAAGACCTTAGGGACTTTGATCTTTTGGGATTTCAACATTTaGGATTATGGTGCTCAGGACTGTGTCTGTCGAGATTATGATCCA +
Preference number: 5 (lower is better)
Translates to: PAKTLGTLIFWDFNI*DYGAQDCVCRDYDP
Trigger: TGGATCATAATCTCGACAGACACAGTCCTGAGCACCATAATCCCAAATGTTGAAATCCCAAAAGATCAAAGTCCCTAAGGTCTTGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469559.5
CDS-3UTR CAA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTGTAGAACCATCTTTCTaGAAGGCAGGCTTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLVEPSF*KAGFSL
Trigger: CAAACTGAAGCCTGCCTTCAAGAAAGATGGTTCTAC...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301810.11
ENST00000333167.13
ENST00000411549.5
ENST00000450296.5
ENST00000625927.3
CDS-3UTR CAA 90 bp CATGCACTTTTACTATGCCCATTGCACTTCTCATCCATGGATTTGCCTTGCCTTCATGTGGTTTTGCTTTaGTGGTGTTACTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: HALLLCPLHFSSMDLPCLHVVLL*WCYCLA
Trigger: AGCAAGGCAGTAACACCACAAAAGCAAAACCACATG...AAGGCAAGGCAAATCCATGGATGAGAAGTGCAATGGGCATAGTAAAAGTGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:<