Pregenerated sensors for ABRAXAS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000165660Ensembl transcript IDs: ENST00000298492.6
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACACCTTCTGTTCTCCACTaGTGTGTGTCCTCCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: AVLVINGGSCCFQTRSSTPSVLH*CVSSKI Trigger: AATCTTGGAGGACACACAGCAGTGGAGAACAGAAGG...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR TCA 90 bp | CCACTGCTGTGTGTCCTCCAAGATTCCAGAACAGAGACCATAAATGTGCCAGTGCTTTTCTGGCAAAGATaGATTTGGCTCATCATAGAA | + |
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Preference number: 2 (lower is better) Translates to: PLLCVLQDSRTETINVPVLFWQR*IWLIIE Trigger: TTCTATGATGAGCCAAATTCATCTTTGCCAGAAAAG...CACTGGCACATTTATGGTCTCTGTTCTGGAATCTTGGAGGACACACAGCAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATTACCAGTATATCCATaGATCGCACCAGAATTAGGA | + |
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Preference number: 2 (lower is better) Translates to: AVLVINGGSCCFQTRSSTLPVYP*IAPELG Trigger: TCCTAATTCTGGTGCGATTCATGGATATACTGGTAA...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGCCTCTCAGTAAGCAATaGAGAAAAACAGTGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: TETINVPVQHSSHCNPSKPLSKQ*RKTVLG Trigger: ACCTAGCACTGTTTTTCTTCATTGCTTACTGAGAGG...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR TCA 90 bp | TGGAACACATTTGCAGATAAAGTGGTCTGCAGCGTTTTAAATCAAATGGCAGTGGGAACTGGAGCTCAGTaGGTAAATGTGTATCCTATA | + |
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Preference number: 2 (lower is better) Translates to: WNTFADKVVCSVLNQMAVGTGAQ*VNVYPI Trigger: TATAGGATACACATTTACTCACTGAGCTCCAGTTCC...CACTGCCATTTGATTTAAAACGCTGCAGACCACTTTATCTGCAAATGTGTTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR GCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCATAAATGGTGGGTCTTaGTGTTTCCAAACCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFINGGS*CFQTRS Trigger: GCTTCTGGTTTGGAAACAGCAAGACCCACCATTTAT...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCTTTTATCTCACAAAGTCATGCAGACAAGAGAAGGTATATCTGATTTGTAGGCTGCTGCTAAACTaGTTTCCCTTTGAAAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: PLFYLTKSCRQEKVYLICRLLLN*FPFEKV Trigger: TACTTTTTCAAAGGGAAACAAGTTTAGCAGCAGCCT...ACAAATCAGATATACCTTCTCTTGTCTGCATGACTTTGTGAGATAAAAGAGAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| 3UTR TCA 72 bp | ATCTCACAAAGTCATGCAGACAAGAGAAGGTATATCTaGTTTGTTCTAATCAGGCTTCTTGGAATTATCAAA | + |
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Preference number: 3 (lower is better) Translates to: ISQSHADKRRYI*FVLIRLLGIIK Trigger: TTTGATAATTCCAAGAAGCCTGATTAGAACAAATCAGATATACCTTCTCTTGTCTGCATGACTTTGTGAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | CCACTGCTGTGTGTCCTCCAAGATTCCAGAACAGAGACCATAAATGTGCCAGTGAGGTCTGAGTGTTCCTaGGGTCCTCGTCGGGATGTG | + |
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Preference number: 4 (lower is better) Translates to: PLLCVLQDSRTETINVPVRSECS*GPRRDV Trigger: CACATCCCGACGAGGACCCCAGGAACACTCAGACCT...CACTGGCACATTTATGGTCTCTGTTCTGGAATCTTGGAGGACACACAGCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | CCACTGCTGTGTGTCCTCCAAGATTCCAGAACAGAGACCATAAATGTGCCAGTGGTCCTCGTCGGGATGTaGCATGGGTCGAGAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: PLLCVLQDSRTETINVPVVLVGM*HGSRIL Trigger: AAGGATTCTCGACCCATGGCACATCCCGACGAGGAC...CACTGGCACATTTATGGTCTCTGTTCTGGAATCTTGGAGGACACACAGCAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCGGAAACACACAGCACTaGAGGTGTAGCCCGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSGNTQH*RCSPKW Trigger: CCATTTCGGGCTACACCTTCAGTGCTGTGTGTTTCC...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTCGCCGAGGATGCGGGTaGGCTGCTTGTGAAGAACCT | + |
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Preference number: 4 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTRRGCG*AACEEP Trigger: AGGTTCTTCACAAGCAGCTCACCCGCATCCTCGGCG...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | CATGGCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCTCTGCTGCTGCGTATTaGGCCGGAATCTGTACCACC | + |
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Preference number: 4 (lower is better) Translates to: HGCPCHKWWVLLFPNQKLSAAAY*AGICTT Trigger: GGTGGTACAGATTCCGGCGCAATACGCAGCAGCAGA...GAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACACCGAGGACTGAACGCTaGGTCCAAGCTTTCAGACGG | + |
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Preference number: 4 (lower is better) Translates to: AVLVINGGSCCFQTRSSTPRTER*VQAFRR Trigger: CCGTCTGAAAGCTTGGACCCAGCGTTCAGTCCTCGG...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCAGGATCCGAGGCCTCTaGATCTCCAAGTGTACTTCT | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSRIRGL*ISKCTS Trigger: AGAAGTACACTTGGAGATGCAGAGGCCTCGGATCCT...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCAGTAAAAATCCTTCGTaGTCCGCGTTGCTGTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSSKNPS*SALLLA Trigger: CGCCAACAGCAACGCGGACCACGAAGGATTTTTACT...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | CCACTGCTGTGTGTCCTCCAAGATTCCAGAACAGAGACCATAAATGTGCCAGTGCGTCGGGATGTGCCATaGGTCGAGAATCCTTTGAAT | + |
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Preference number: 4 (lower is better) Translates to: PLLCVLQDSRTETINVPVRRDVP*VENPLN Trigger: ATTCAAAGGATTCTCGACCCATGGCACATCCCGACG...CACTGGCACATTTATGGTCTCTGTTCTGGAATCTTGGAGGACACACAGCAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACACAGACCCCCATAGAGTaGCGATCCAAAGAACGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AVLVINGGSCCFQTRSSTQTPIE*RSKERQ Trigger: CTGCCGTTCTTTGGATCGCCACTCTATGGGGGTCTG...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGACGGCATCCGAGGACTaGACGCTGGGTCCAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TETINVPVQHSSHCNPSKTASED*TLGPSF Trigger: AAAGCTTGGACCCAGCGTTCAGTCCTCGGATGCCGT...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ATGGCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAGAAGAGCCCACAGCTTaGGGTCGAGGCATAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: MAVLVINGGSCCFQTRSSEEPTA*GRGIKT Trigger: TGTCTTTATGCCTCGACCTCAAGCTGTGGGCTCTTC...TGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAGGTCCGCGTTGCTGTTaGCGCTGTGGAAACACACAG | + |
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Preference number: 4 (lower is better) Translates to: RTETINVPVQHSSHCNPSGPRCC*RCGNTQ Trigger: CTGTGTGTTTCCACAGCGCCAACAGCAACGCGGACC...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | TGGAACACATTTGCAGATAAAGTGGTCTGCAGCGTTTTAAATCAAATGGCAGTGCTTCGTGGTCCGCGTTaGTGTTGGCGCTGTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: WNTFADKVVCSVLNQMAVLRGPR*CWRCGN Trigger: GTTTCCACAGCGCCAACAGCAACGCGGACCACGAAG...CACTGCCATTTGATTTAAAACGCTGCAGACCACTTTATCTGCAAATGTGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCAACATCTGCACACACTaGCTGAACTTTCTCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSNICTH*LNFLLK Trigger: CTTCAGGAGAAAGTTCAGGCAGTGTGTGCAGATGTT...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAACCACTGTCTCCAGCTaGTCTTTGGGGAGGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RTETINVPVQHSSHCNPSTTVSS*SLGRRK Trigger: CTTCCTCCTCCCCAAAGAGCAGCTGGAGACAGTGGT...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCATCTGTACCACCCAATaGCTTTCTTTCTCCGATCTT | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSICTTQ*LSFSDL Trigger: AAGATCGGAGAAAGAAAGTCATTGGGTGGTACAGAT...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACAATAATCACTGTCGTCTaGATCCTCACCACTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: AVLVINGGSCCFQTRSSTIITVV*ILTTVS Trigger: GGAGACAGTGGTGAGGATTCAGACGACAGTGATTAT...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGAATTCACACTGGCGCTaGAGCTGCGTAGTAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TETINVPVQHSSHCNPSKNSHWR*SCVVGS Trigger: GCTACCTACTACGCAGCTTCAGCGCCAGTGTGAATT...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAACTTCTGCCTTCAGCTaGAAACCCAGAGGACGGCAT | + |
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Preference number: 4 (lower is better) Translates to: RTETINVPVQHSSHCNPSTSAFS*KPRGRH Trigger: ATGCCGTCCTCTGGGTTTGCAGCTGAAGGCAGAAGT...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | ATGGCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCACCTTCTGTTCTCCACTaGTGTGTGTCCTCCAAGATT | + |
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Preference number: 4 (lower is better) Translates to: MAVLVINGGSCCFQTRSSPSVLH*CVSSKI Trigger: AATCTTGGAGGACACACAGCAGTGGAGAACAGAAGG...TGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCATTCTAAAGCGTGAGTaGAATTGTTGGCAGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSILKRE*NCWQWR Trigger: TCTCCACTGCCAACAATTCCACTCACGCTTTAGAAT...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATGCTGGTGGAAGCATAATTaGAAGAGCCCACAGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VLVINGGSCCFQTRSSTCWWKHN*KSPQLE Trigger: CTCAAGCTGTGGGCTCTTCCAATTATGCTTCCACCA...GCATGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCTGTCCTTGTCATAAATaGTGGGTCTTGCTGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ANITRRVVKRQTPIEWRSCPCHK*WVLLFP Trigger: TGGAAACAGCAAGACCCACCATTTATGACAAGGACA...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ATGGCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCACCTGATAAATCGCCCTaGTGTCTTTCATCACTCCAT | + |
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Preference number: 4 (lower is better) Translates to: MAVLVINGGSCCFQTRSSPDKSP*CLSSLH Trigger: ATGGAGTGATGAAAGACATCAGGGCGATTTATCAGG...TGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATGCTTGTTCACTTCTGCCTaGCAAGATTCAACAACTCGC | + |
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Preference number: 4 (lower is better) Translates to: VLVINGGSCCFQTRSSTCLFTSA*QDSTTR Trigger: GCGAGTTGTTGAATCTTGTCAGGCAGAAGTGAACAA...GCATGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GTTTCCAAACCAGAAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTACTTCAGTCCGGCACTaGTGGAAGCATAATTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSKPEAQHAPECLSGFRRTSVRH*WKHNWK Trigger: CTTCCAATTATGCTTCCACCAGTGCCGGACTGAAGT...ACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTTCTGGTTTGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATGCCTGAATGTCAAAATCTaGACAGAGGAGACGGTAATG | + |
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Preference number: 4 (lower is better) Translates to: VLVINGGSCCFQTRSSTCLNVKI*TEETVM Trigger: CATTACCGTCTCCTCTGTTCAGATTTTGACATTCAG...GCATGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | GTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATGCATAAATGGTGGGTCTTaGTGTTTCCAAACCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VLVINGGSCCFQTRSSTCINGGS*CFQTRS Trigger: GCTTCTGGTTTGGAAACAGCAAGACCCACCATTTAT...GCATGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTACATATTCTAAAGCGTaGGTGGAATTGTTGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTTYSKA*VELLAV Trigger: CACTGCCAACAATTCCACTCACGCTTTAGAATATGT...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACAATTGGGAATAGCGAGTaGTATCCTCTGATTATACCT | + |
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Preference number: 4 (lower is better) Translates to: AVLVINGGSCCFQTRSSTIGNSE*YPLIIP Trigger: AGGTATAATCAGAGGATATCACTCGCTATTCCCAAT...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | GTTTCCAAACCAGAAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTATATCTCCTCTGTATaGACTCAGCTAAACCTACCG | + |
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Preference number: 4 (lower is better) Translates to: VSKPEAQHAPECLSGFRRYISSV*TQLNLP Trigger: CGGTAGGTTTAGCTGAGTTCATACAGAGGAGATATA...ACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTTCTGGTTTGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTGGAACTGGAGCTCAGTaGGTAAATGTGTATCCTATA | + |
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Preference number: 4 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTGTGAQ*VNVYPI Trigger: TATAGGATACACATTTACTCACTGAGCTCCAGTTCC...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | TATCTCCTCTGTATGAACTCAGCTAAACCTACCGTGTCTGGAATCTGTTCATTAAGACACTCCTTTCCATaGGAGAGTGGCTCAAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: YLLCMNSAKPTVSGICSLRHSFP*ESGSKY Trigger: GTACTTTGAGCCACTCTCGCATGGAAAGGAGTGTCT...TAATGAACAGATTCCAGACACGGTAGGTTTAGCTGAGTTCATACAGAGGAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACATGGTTTCAGACGTTGTaGGCAAAACTAGAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: AVLVINGGSCCFQTRSSTWFQTL*AKLENK Trigger: CTTGTTTTCTAGTTTTGCCCACAACGTCTGAAACCA...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCATGTGTTGCTGATTTGTaGGTCACTGATGCTAAACGT | + |
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Preference number: 4 (lower is better) Translates to: RTETINVPVQHSSHCNPSCVADL*VTDAKR Trigger: ACGTTTAGCATCAGTGACTCACAAATCAGCAACACA...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCCAGACGGCATCTGTCTaGTTAACACTGCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFQTASV*LTLPAA Trigger: TGCAGCAGGCAGTGTTAAGCAGACAGATGCCGTCTG...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGGCGAGTGATATCCTCTaGTTATACCTTCTATTTGGT | + |
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Preference number: 4 (lower is better) Translates to: TETINVPVQHSSHCNPSKASDIL*LYLLFG Trigger: ACCAAATAGAAGGTATAATCAGAGGATATCACTCGC...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTTCTCCTCATTCACTTTaGTTGCGTAGTCATAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTSPHSL*LRSHKN Trigger: GTTTTTATGACTACGCAAGCAAAGTGAATGAGGAGA...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCTCAGTCCGGCACTGGTaGAAGCATAATTGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFSVRHW*KHNWKS Trigger: GCTCTTCCAATTATGCTTCCACCAGTGCCGGACTGA...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGCTTTTCTGGCAAAGATaGATTTGGCTCATCATAGAA | + |
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Preference number: 4 (lower is better) Translates to: TETINVPVQHSSHCNPSKLFWQR*IWLIIE Trigger: TTCTATGATGAGCCAAATTCATCTTTGCCAGAAAAG...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | TATCTCCTCTGTATGAACTCAGCTAAACCTACCGTGTCTGGAATCTGTTCATTAACTCTTTTCAACATCTaGACACACTGCCTGAACTTT | + |
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Preference number: 4 (lower is better) Translates to: YLLCMNSAKPTVSGICSLTLFNI*THCLNF Trigger: AAAGTTCAGGCAGTGTGTGCAGATGTTGAAAAGAGT...TAATGAACAGATTCCAGACACGGTAGGTTTAGCTGAGTTCATACAGAGGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | ACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAAGACTTTGTACTCTTGCTaGCTAGTATTTCCTAGATTG | + |
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Preference number: 4 (lower is better) Translates to: TETINVPVQHSSHCNPSKTLYSC*LVFPRL Trigger: CAATCTAGGAAATACTAGCCAGCAAGAGTACAAAGT...CTTTGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CCA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAACTTTCTTGATTGTTTaGGTGAAAATCAGAGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: RTETINVPVQHSSHCNPSTFLIV*VKIRVR Trigger: CCTTACTCTGATTTTCACCCAAACAATCAAGAAAGT...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCCCTCTCAGTAAGCAATaGAGAAAAACAGTGCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFPLSKQ*RKTVLG Trigger: ACCTAGCACTGTTTTTCTTCATTGCTTACTGAGAGG...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCCTTAACACTGCCTGCTaGAATCTTCTTTCTTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFLNTAC*NLLSCS Trigger: GGAACAAGAAAGAAGATTGCAGCAGGCAGTGTTAAG...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR GCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCCTGCTTAACACTGCCTaGTGCAATCTTCTTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFLLNTA*CNLLSC Trigger: ACAAGAAAGAAGATTGCAGCAGGCAGTGTTAAGCAG...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR TCA 90 bp | CTGAAACTACTTTTTCAGAACCCAGATTTTAAGCCTTCAACAACTTCCTTATTCTTACCAGTATATCCATaGATCGCACCAGAATTAGGA | + |
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Preference number: 4 (lower is better) Translates to: LKLLFQNPDFKPSTTSLFLPVYP*IAPELG Trigger: TCCTAATTCTGGTGCGATTCATGGATATACTGGTAA...GAATAAGGAAGTTGTTGAAGGCTTAAAATCTGGGTTCTGAAAAAGTAGTTTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS GCA 90 bp | AGGATCCGAGGCCTCTGCATCTCCAAGTGTACTTCTGCCTTCAGCTaGAAACCCAGAGGACGGCATCCGAGGACTGAACGCTGGGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: RIRGLCISKCTSAFS*KPRGRHPRTERWVQ Trigger: TTGGACCCAGCGTTCAGTCCTCGGATGCCGTCCTCTGGGTTTGCAGCTGAAGGCAGAAGTACACTTGGAGATGCAGAGGCCTCGGATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CCA 90 bp | GAGGAGGAAGGTCAGCCCCACTTCCAGGATACTTCAGTCCGGCACTaGTGGAAGCATAATTGGAAGAGCCCACAGCTTGAGGTCGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: EEEGQPHFQDTSVRH*WKHNWKSPQLEVEA Trigger: TGCCTCGACCTCAAGCTGTGGGCTCTTCCAATTATGCTTCCACCAGTGCCGGACTGAAGTATCCTGGAAGTGGGGCTGACCTTCCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCCCTTCGTGGTCCGCGTaGCTGTTGGCGCTGTGGAAA | + |
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Preference number: 5 (lower is better) Translates to: ANITRRVVKRQTPIEWRSPSWSA*LLALWK Trigger: TTTCCACAGCGCCAACAGCAACGCGGACCACGAAGG...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS GCA 90 bp | GTTTGGGTGAAAATCAGAGTAAGGGGGAGGAGGATCCGAGGCCTCTaGATCTCCAAGTGTACTTCTGCCTTCAGCTGCAAACCCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: VWVKIRVRGRRIRGL*ISKCTSAFSCKPRG Trigger: TCCTCTGGGTTTGCAGCTGAAGGCAGAAGTACACTTGGAGATGCAGAGGCCTCGGATCCTCCTCCCCCTTACTCTGATTTTCACCCAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCTGGTCCGCGTTGCTGTaGGCGCTGTGGAAACACACA | + |
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Preference number: 5 (lower is better) Translates to: ANITRRVVKRQTPIEWRSWSALL*ALWKHT Trigger: TGTGTGTTTCCACAGCGCCAACAGCAACGCGGACCA...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACAGGAAGAGCCCACAGCTaGAGGTCGAGGCATAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: AVLVINGGSCCFQTRSSTGRAHS*RSRHKD Trigger: GTCTTTATGCCTCGACCTCAAGCTGTGGGCTCTTCC...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTATCTGCTGCTGCGTATaGCGCCGGAATCTGTACCAC | + |
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Preference number: 5 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTICCCV*RRNLYH Trigger: GTGGTACAGATTCCGGCGCAATACGCAGCAGCAGAT...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | GCCAACATAACCAGGAGAGTAGTTAAAAGACAGACCCCCATAGAGTGGCGATCCCATAAATGGTGGGTCTaGCTGTTTCCAAACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: ANITRRVVKRQTPIEWRSHKWWV*LFPNQK Trigger: CTTCTGGTTTGGAAACAGCAAGACCCACCATTTATG...GGATCGCCACTCTATGGGGGTCTGTCTTTTAACTACTCTCCTGGTTATGTTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | GCTGTCCTTGTCATAAATGGTGGGTCTTGCTGTTTCCAAACCAGAAGCTCAACAGGCACTGAAGACACTTaGTACTCTTGCTGGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: AVLVINGGSCCFQTRSSTGTEDT*YSCWLV Trigger: TACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCC...TGTTGAGCTTCTGGTTTGGAAACAGCAAGACCCACCATTTATGACAAGGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCACTGTCTAATTTAGTATaGGAACTGGAGCTCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RTETINVPVQHSSHCNPSLSNLV*ELELSE Trigger: CTCACTGAGCTCCAGTTCCAATACTAAATTAGACAG...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | AAGCTCAACATGCTCCTGAATGTCTTAGTGGTTTCAGACGTTGTGGGCAAAACTGCTCAAAGTACTTTCTaGATTGTTTGGGTGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: KLNMLLNVLVVSDVVGKTAQSTF*IVWVKI Trigger: GATTTTCACCCAAACAATCAAGAAAGTACTTTGAGC...AGTTTTGCCCACAACGTCTGAAACCACTAAGACATTCAGGAGCATGTTGAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | AGAACAGAGACCATAAATGTGCCAGTGCAACACAGTAGTCACTGTAATCCATCAAGGCTGCTGCTAAACTaGTTTCCCTTTGAAAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: RTETINVPVQHSSHCNPSRLLLN*FPFEKV Trigger: TACTTTTTCAAAGGGAAACAAGTTTAGCAGCAGCCT...TGATGGATTACAGTGACTACTGTGTTGCACTGGCACATTTATGGTCTCTGTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | TGGAACACATTTGCAGATAAAGTGGTCTGCAGCGTTTTAAATCAAATGGCAGTGCTAGTATTTCCTAGATaGGGAATAGCGAGTGATATC | + |
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Preference number: 5 (lower is better) Translates to: WNTFADKVVCSVLNQMAVLVFPR*GIASDI Trigger: GATATCACTCGCTATTCCCAATCTAGGAAATACTAG...CACTGCCATTTGATTTAAAACGCTGCAGACCACTTTATCTGCAAATGTGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | TGGAACACATTTGCAGATAAAGTGGTCTGCAGCGTTTTAAATCAAATGGCAGTGAACTCTGAGAAGTATTaGGCACTGAAGACACTTTGT | + |
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Preference number: 5 (lower is better) Translates to: WNTFADKVVCSVLNQMAVNSEKY*ALKTLC Trigger: ACAAAGTGTCTTCAGTGCCAAATACTTCTCAGAGTT...CACTGCCATTTGATTTAAAACGCTGCAGACCACTTTATCTGCAAATGTGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS-3UTR CAA 90 bp | TGGAACACATTTGCAGATAAAGTGGTCTGCAGCGTTTTAAATCAAATGGCAGTGTGGGTCGAGAATCCTTaGAATGTGAGTATTCACTAT | + |
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Preference number: 5 (lower is better) Translates to: WNTFADKVVCSVLNQMAVWVENP*NVSIHY Trigger: ATAGTGAATACTCACATTCAAAGGATTCTCGACCCA...CACTGCCATTTGATTTAAAACGCTGCAGACCACTTTATCTGCAAATGTGTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS GCA 72 bp | GGCCTCTGCATCTCCAAGTGTACTTCTGCCTTCAGCTaGAAACCCAGAGGACGGCATCCGAGGACTGAACGC | + |
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Preference number: 6 (lower is better) Translates to: GLCISKCTSAFS*KPRGRHPRTER Trigger: GCGTTCAGTCCTCGGATGCCGTCCTCTGGGTTTGCAGCTGAAGGCAGAAGTACACTTGGAGATGCAGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CCA 72 bp | GGTCAGCCCCACTTCCAGGATACTTCAGTCCGGCACTaGTGGAAGCATAATTGGAAGAGCCCACAGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: GQPHFQDTSVRH*WKHNWKSPQLE Trigger: CTCAAGCTGTGGGCTCTTCCAATTATGCTTCCACCAGTGCCGGACTGAAGTATCCTGGAAGTGGGGCTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CAA 90 bp | CTTCAGTCCGGCACTGGTGGAAGCATAATTGGAAGAGCCCACAGCTaGAGGTCGAGGCATAAAGACACTCCTTTCCATGCGAGAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LQSGTGGSIIGRAHS*RSRHKDTPFHARVA Trigger: AGCCACTCTCGCATGGAAAGGAGTGTCTTTATGCCTCGACCTCAAGCTGTGGGCTCTTCCAATTATGCTTCCACCAGTGCCGGACTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CAA 72 bp | GGCACTGGTGGAAGCATAATTGGAAGAGCCCACAGCTaGAGGTCGAGGCATAAAGACACTCCTTTCCATGCG | + |
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Preference number: 6 (lower is better) Translates to: GTGGSIIGRAHS*RSRHKDTPFHA Trigger: CGCATGGAAAGGAGTGTCTTTATGCCTCGACCTCAAGCTGTGGGCTCTTCCAATTATGCTTCCACCAGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS GCA 72 bp | AAAATCAGAGTAAGGGGGAGGAGGATCCGAGGCCTCTaGATCTCCAAGTGTACTTCTGCCTTCAGCTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: KIRVRGRRIRGL*ISKCTSAFSCK Trigger: TTTGCAGCTGAAGGCAGAAGTACACTTGGAGATGCAGAGGCCTCGGATCCTCCTCCCCCTTACTCTGATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CAA 90 bp | CACTCCTTTCCATGCGAGAGTGGCTCAAAGTACTTTCTTGATTGTTaGGGTGAAAATCAGAGTAAGGGGGAGGAGGATCCGAGGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: HSFPCESGSKYFLDC*GENQSKGEEDPRPL Trigger: CAGAGGCCTCGGATCCTCCTCCCCCTTACTCTGATTTTCACCCAAACAATCAAGAAAGTACTTTGAGCCACTCTCGCATGGAAAGGAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CCA 72 bp | TCTGAGTGTTCCTGGGGTCCTCGTCGGGATGTGCCATaGGTCGAGAATCCTTTGAATGTGAGTATTCACTAT | + |
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Preference number: 6 (lower is better) Translates to: SECSWGPRRDVP*VENPLNVSIHY Trigger: ATAGTGAATACTCACATTCAAAGGATTCTCGACCCATGGCACATCCCGACGAGGACCCCAGGAACACTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CAA 90 bp | CATAAAGACACTCCTTTCCATGCGAGAGTGGCTCAAAGTACTTTCTaGATTGTTTGGGTGAAAATCAGAGTAAGGGGGAGGAGGATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: HKDTPFHARVAQSTF*IVWVKIRVRGRRIR Trigger: TCGGATCCTCCTCCCCCTTACTCTGATTTTCACCCAAACAATCAAGAAAGTACTTTGAGCCACTCTCGCATGGAAAGGAGTGTCTTTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS TCA 72 bp | CTTCTATTTGGTCTGAAGAGCACATATTCTAAAGCGTaGGTGGAATTGTTGGCAGTGGAGATGAAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLFGLKSTYSKA*VELLAVEMKLK Trigger: CTTCAGCTTCATCTCCACTGCCAACAATTCCACTCACGCTTTAGAATATGTGCTCTTCAGACCAAATAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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| CDS CCA 72 bp | GAAGTATTTGGCACTGAAGACACTTTGTACTCTTGCTaGCTAGTATTTCCTAGATTGGGAATAGCGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: EVFGTEDTLYSC*LVFPRLGIASD Trigger: ATCACTCGCTATTCCCAATCTAGGAAATACTAGCCAGCAAGAGTACAAAGTGTCTTCAGTGCCAAATACTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000298492.6 |
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