Pregenerated sensors for ABRAXAS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163322Ensembl transcript IDs: ENST00000321945.12, ENST00000503217.2, ENST00000504777.1, ENST00000506553.5, ENST00000511801.1, ENST00000515303.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATGGCGGGCAGATCACCTaGGGTCAGGTGTTTGAGACC | + |
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Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHGGQIT*GQVFET Trigger: GGTCTCAAACACCTGACCTCAGGTGATCTGCCCGCC...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATCCGGGAAGCAGAGGTTaGAGTGAGCCGGAATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHPGSRG*SEPESH Trigger: GTGGGATTCCGGCTCACTGCAACCTCTGCTTCCCGG...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATAGCCAGGCGTGGTGGTaGATACCTATGGTCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHSQAWW*IPMVPA Trigger: TGCTGGGACCATAGGTATGCACCACCACGCCTGGCT...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR TCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATCTGAGGTCAGGTGTTTaGGACCAGCTTGGCCAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHLRSGV*DQLGQD Trigger: ATCTTGGCCAAGCTGGTCTCAAACACCTGACCTCAG...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR GCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATAGTGACCAGTGTTTGTaGCACTACACTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHSDQCL*HYTPAW Trigger: CCAGGCTGGAGTGTAGTGGCACAAACACTGGTCACT...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR CCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATTGTTTGAGACCAGCTTaGCCAAGATGGCAAAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHCLRPA*PRWQSP Trigger: GGGGCTTTGCCATCTTGGCCAAGCTGGTCTCAAACA...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATACCTCCTGGGTTCAAGTaGTTCTCATGCTTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIPPGFK*FSCFSL Trigger: GAGGCTGAAGCATGAGAATCACTTGAACCCAGGAGG...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATAATACAAATATTGGCTaGGTGTGGTGGCAGTCGCCG | + |
|
Preference number: 2 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHNTNIG*VWWQSP Trigger: CGGCGACTGCCACCACACCCAGCCAATATTTGTATT...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATACTACAACAGCAGAGTTaGGTGGCAGTGATGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIILQQQS*VAVMET Trigger: AGTCTCCATCACTGCCACTCAACTCTGCTGTTGTAG...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR TCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGAGGTCAAGGCTGCAGTaGCCAGTGTTTGTGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: VYLQECDFQIYTQQHKEMRSRLQ*PVFVPL Trigger: TAGTGGCACAAACACTGGTCACTGCAGCCTTGACCT...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGTTGAGCCTAGGAGTTTaGGACCAGCCTGGGCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: VYLQECDFQIYTQQHKEMLSLGV*DQPGQQ Trigger: TTGTTGCCCAGGCTGGTCTCAAACTCCTAGGCTCAA...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAAGGTGTGAGCCACTGTaGCTGGTCTCACTTTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIRCEPL*LVSLFQ Trigger: TTGGAAAAGTGAGACCAGGCACAGTGGCTCACACCT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGACTTAAAAACTTGTTaGGGCTGGGCATGTTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIDLKTC*GWACWL Trigger: GAGCCAACATGCCCAGCCTCAACAAGTTTTTAAGTC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAATGGTCTCAATACGTTaGCCAGGCTGGTCTCTAACT | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIMVSIR*PGWSLT Trigger: AGTTAGAGACCAGCCTGGGCAACGTATTGAGACCAT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGTGAGCCACTGTGCCTaGTCTCACTTTTCCAATTCT | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIVSHCA*SHFSNS Trigger: AGAATTGGAAAAGTGAGACCAGGCACAGTGGCTCAC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATTCAATCAATCCTCCTaGCTTGTCTTCCCTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIFNQSS*LVFPKC Trigger: GCACTTAGGGAAGACAAGTCAGGAGGATTGATTGAA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAAAAATTATCCGGGTGTaGCGGTGCATGCCTGTAATT | + |
|
Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIKIIRV*RCMPVI Trigger: AATTACAGGCATGCACCGCCACACCCGGATAATTTT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGTGATGGAGACTGTATaGCCCACAAAACCTAGATTA | + |
|
Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIIVMETV*PTKPRL Trigger: TAATCTAGGTTTTGTGGGCCATACAGTCTCCATCAC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATGTATTTTTAGAGATTaGGTTTCTCCATGTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: AHRPNSTCSLFILIRFIICIFRD*VSPCWP Trigger: TGGCCAACATGGAGAAACCCAATCTCTAAAAATACA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTGTACTTGTGATATCTTaGGAGATATTAGGCACATAT | + |
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Preference number: 2 (lower is better) Translates to: QITKSKTVQMQPKNRPILVLVIS*EILGTY Trigger: ATATGTGCCTAATATCTCCCAAGATATCACAAGTAC...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR CCA 72 bp | GGTCTCACTACGTTGTCCCCGATGGTCTCGAACTCGTaGGCTCAGGTGATTCACCCGCCTCGGCTTCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: GLTTLSPMVSNS*AQVIHPPRLPK Trigger: TTTGGGAAGCCGAGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGTGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| 3UTR TCA 72 bp | GTGGCAGTCGCCGGTAATCCCAGCTACTCGGGAGGCTaGGACAGGGATAATCACTTGAACCCGGGAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VAVAGNPSYSGG*DRDNHLNPGSR Trigger: TCTGCTTCCCGGGTTCAAGTGATTATCCCTGTCTCAGCCTCCCGAGTAGCTGGGATTACCGGCGACTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR CAA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATTGCAGTGACCAGTGTTaGTGCCACTACACTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHCSDQC*CHYTPA Trigger: GGCTGGAGTGTAGTGGCACAAACACTGGTCACTGCA...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR CAA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATCCTGAGGTCAGGTGTTaGAGACCAGCTTGGCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHPEVRC*RPAWPR Trigger: TCTTGGCCAAGCTGGTCTCAAACACCTGACCTCAGG...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGCTACAACAGCAGAGTaGAGTGGCAGTGATGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: AHRPNSTCSLFILIRFIIATTAE*SGSDGD Trigger: GTCTCCATCACTGCCACTCAACTCTGCTGTTGTAGC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATACGTAGTGCCATATGGTaGTTTTCGAGCTACAACAGC | + |
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Preference number: 3 (lower is better) Translates to: AHRPNSTCSLFILIRFIIRSAIW*FSSYNS Trigger: GCTGTTGTAGCTCGAAAACAACCATATGGCACTACG...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CAA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTGTGTTTGAGACCAGCTaGGCCAAGATGGCAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: QITKSKTVQMQPKNRPILVFETS*AKMAKP Trigger: GGGCTTTGCCATCTTGGCCAAGCTGGTCTCAAACAC...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATGTAGAAATGTTACATaGGGATGGATAGTGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: AHRPNSTCSLFILIRFIICRNVT*GWIVVL Trigger: CAGCACCACTATCCATCCCAATGTAACATTTCTACA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| 3UTR-3UTR CAA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGTGTACTTGTGATATCTaGGGAGATATTAGGCACATA | + |
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Preference number: 3 (lower is better) Translates to: VYLQECDFQIYTQQHKEMCTCDI*GDIRHI Trigger: TATGTGCCTAATATCTCCCAAGATATCACAAGTACA...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CCA 90 bp | GTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACCCGCCTCGGCTTCCATGGTCTCGAACTCGTaGGCTCAGGTGATTCACCCG | + |
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Preference number: 4 (lower is better) Translates to: VPDGLELVGSGDSPASASMVSNS*AQVIHP Trigger: CGGGTGAATCACCTGAGCCCACGAGTTCGAGACCAT...GGAAGCCGAGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR GCA 90 bp | ACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACCCGCCTTACTCTCCCCCTCCATaGTACCGCCGCCTCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: TTLSPMVSNSWAQVIHPPYSPPP*YRRLRL Trigger: TAGCCTGAGGCGGCGGTAGCATGGAGGGGGAGAGTA...AGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR GCA 90 bp | GGTCTCACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACGTGCTGGAAAGCGAGTaGGCCGAGCACAAAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: GLTTLSPMVSNSWAQVIHVLESE*AEHKAR Trigger: TCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCAC...GTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGTGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR GCA 90 bp | GGTCTCACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: GLTTLSPMVSNSWAQVIHESVLR*WKASAP Trigger: CGGCGCACTCGCTTTCCAGCACCTCAACACGGACTC...GTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGTGAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR TCA 90 bp | GGTCTCACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACTGTCCGAGTCCGTGTTaGGGTGCTGGAAAGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: GLTTLSPMVSNSWAQVIHCPSPC*GAGKRV Trigger: CACTCGCTTTCCAGCACCTCAACACGGACTCGGACA...GTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGTGAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR GCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATGTGCTGGAAAGCGAGTaGGCCGAGCACAAAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHVLESE*AEHKAR Trigger: TCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCAC...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATTGTCCGAGTCCGTGTTaGGGTGCTGGAAAGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHCPSPC*GAGKRV Trigger: CACTCGCTTTCCAGCACCTCAACACGGACTCGGACA...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATACTCTCCCCCTCCATaGTACCGCCGCCTCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIIYSPPP*YRRLRL Trigger: TAGCCTGAGGCGGCGGTAGCATGGAGGGGGAGAGTA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGTGCTGGAAAGCGAGTaGGCCGAGCACAAAGCCCGA | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIIVLESE*AEHKAR Trigger: TCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCAC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIIESVLR*WKASAP Trigger: CGGCGCACTCGCTTTCCAGCACCTCAACACGGACTC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATGTCCGAGTCCGTGTTaGGGTGCTGGAAAGCGAGTG | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIICPSPC*GAGKRV Trigger: CACTCGCTTTCCAGCACCTCAACACGGACTCGGACA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGCCGGGAAGCAGAGGTTaGAGTGAGCCGGAATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VYLQECDFQIYTQQHKEMPGSRG*SEPESH Trigger: GTGGGATTCCGGCTCACTGCAACCTCTGCTTCCCGG...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATTTGAGCCTAGGAGTTTaGGACCAGCCTGGGCAACAA | + |
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Preference number: 4 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHLSLGV*DQPGQQ Trigger: TTGTTGCCCAGGCTGGTCTCAAACTCCTAGGCTCAA...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CCA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATAATATTGGCTGGGTGTaGTGGCAGTCGCCGGTAATC | + |
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Preference number: 4 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHNIGWV*WQSPVI Trigger: GATTACCGGCGACTGCCACCACACCCAGCCAATATT...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATACTGGTCTTGAATTCCTaGCCTCAGGTGATCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIILVLNS*PQVIHL Trigger: CAGGTGGATCACCTGAGGTCAGGAATTCAAGACCAG...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR TCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGGGTGAGAGGATCACTTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: VYLQECDFQIYTQQHKEMGERIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAAGTGATCCTCTCACC...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR GCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILESVLR*WKASAP Trigger: CGGCGCACTCGCTTTCCAGCACCTCAACACGGACTC...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGCTGAGGTCAGGTGTTTaGGACCAGCTTGGCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: VYLQECDFQIYTQQHKEMLRSGV*DQLGQD Trigger: ATCTTGGCCAAGCTGGTCTCAAACACCTGACCTCAG...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR GCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTAGCCAGGCGTGGTGGTaGATACCTATGGTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILSQAWW*IPMVPA Trigger: TGCTGGGACCATAGGTATGCACCACCACGCCTGGCT...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGACAGGGATAATCACTTaGACCCGGGAAGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VYLQECDFQIYTQQHKEMTGIIT*TREAEV Trigger: AACCTCTGCTTCCCGGGTTCAAGTGATTATCCCTGT...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGTTCTTCTCTCTTGCTaGCTGAATCTGTGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIIVLLSC*LNLCSS Trigger: AGAGGAGCACAGATTCAGGCAGCAAGAGAGAAGAAC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR TCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTAGGTCAAGGCTGCAGTaGCCAGTGTTTGTGCCACTA | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILRSRLQ*PVFVPL Trigger: TAGTGGCACAAACACTGGTCACTGCAGCCTTGACCT...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR GCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTAGTGACCAGTGTTTGTaGCACTACACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILSDQCL*HYTPAW Trigger: CCAGGCTGGAGTGTAGTGGCACAAACACTGGTCACT...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTTGTTTGAGACCAGCTTaGCCAAGATGGCAAAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILCLRPA*PRWQSP Trigger: GGGGCTTTGCCATCTTGGCCAAGCTGGTCTCAAACA...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR TCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAACAACCGAGATCTCTTaGATTGCCATCTGTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIITTEIS*IAICHL Trigger: TAGATGACAGATGGCAATTCAAGAGATCTCGGTTGT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAAGGCCAAATTCGACCTaGTCCCTTTTTATCTTGATT | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIIRPNST*SLFILI Trigger: AATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAACTACTACCAGTATCTaGTTTAGATCGTTTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIITTTSI*FRSFVL Trigger: CAAGACAAACGATCTAAAGCAGATACTGGTAGTAGT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR CCA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATTGGATGCTTTATCTTaGTTACTACTACCAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: AHRPNSTCSLFILIRFIILDALS*LLLPVS Trigger: AGATACTGGTAGTAGTAACCAAGATAAAGCATCCAA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR GCA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTGCAAAACAGTACAAATaGAGCCAAAGAATAGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: QITKSKTVQMQPKNRPILAKQYK*SQRIGL Trigger: TAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGC...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS GCA 90 bp | CCCCGCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGCACCGCC | + |
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Preference number: 5 (lower is better) Translates to: PRPVPRLTVSESVLR*WKASAPSTKPESTA Trigger: GGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS TCA 90 bp | CCGGACCCCGCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTTaGGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: PDPAPSLGSPCPSPC*GAGKRVRRAQSPRA Trigger: TGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGCGGGGTCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS CCA 90 bp | CGCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTTGAGGTGCTaGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGCACCGCCGAC | + |
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Preference number: 5 (lower is better) Translates to: RPVPRLTVSESVLRC*KASAPSTKPESTAD Trigger: GTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS GCA 90 bp | GCGCCCGACCGTGTCCGAGTCCGTGTTGAGGTGCTGGAAAGCGAGTaGGCCGAGCACAAAGCCCGAGAGCACCGCCGACGTACTCTCCCC | + |
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Preference number: 5 (lower is better) Translates to: APDRVRVRVEVLESE*AEHKAREHRRRTLP Trigger: GGGGAGAGTACGTCGGCGGTGCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTCGGGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS GCA 90 bp | CCGGAAGGCCGCTGCATGTCGGTACCACTGCAGAGGGCTGCGAATTaGTTTTGGTGGCCTGCGCCTGCTGAGCGACCTGTCACAAACATG | + |
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Preference number: 5 (lower is better) Translates to: PEGRCMSVPLQRAAN*FWWPAPAERPVTNM Trigger: CATGTTTGTGACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACATGCAGCGGCCTTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS CCA 90 bp | GGCCGCTGCATGTCGGTACCACTGCAGAGGGCTGCGAATTGCTTTTaGTGGCCTGCGCCTGCTGAGCGACCTGTCACAAACATGCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: GRCMSVPLQRAANCF*WPAPAERPVTNMQS Trigger: GCTTTGCATGTTTGTGACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACATGCAGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS TCA 90 bp | GTCTCACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTaGTTCACCCGCCTCGGCTTCCCAAAGGGCTGGAATTACAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: VSLRCPRWSRTRGLR*FTRLGFPKGWNYRR Trigger: ACGCCTGTAATTCCAGCCCTTTGGGAAGCCGAGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGTGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS-3UTR CAA 90 bp | ACTACGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTGATTCACCCGCCTGTGTCCGAGTCCGTGTaGAGGTGCTGGAAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: TTLSPMVSNSWAQVIHPPVSESV*RCWKAS Trigger: ACTCGCTTTCCAGCACCTCAACACGGACTCGGACAC...AGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS CCA 90 bp | CGCTGCATGTCGGTACCACTGCAGAGGGCTGCGAATTGCTTTTGGTaGCCTGCGCCTGCTGAGCGACCTGTCACAAACATGCAAAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: RCMSVPLQRAANCFW*PAPAERPVTNMQSY Trigger: ATAGCTTTGCATGTTTGTGACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACATGCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAGTGTCCGAGTCCGTGTaGAGGTGCTGGAAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: AHRPNSTCSLFILIRFIIVSESV*RCWKAS Trigger: ACTCGCTTTCCAGCACCTCAACACGGACTCGGACAC...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR CAA 90 bp | GTCTACCTCCAGGAGTGTGACTTTCAAATATACACTCAACAGCACAAAGAAATGGTGTCCGAGTCCGTGTaGAGGTGCTGGAAAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: VYLQECDFQIYTQQHKEMVSESV*RCWKAS Trigger: ACTCGCTTTCCAGCACCTCAACACGGACTCGGACAC...CATTTCTTTGTGCTGTTGAGTGTATATTTGAAAGTCACACTCCTGGAGGTAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CAA 90 bp | CAAATCACTAAAAGCAAAACAGTACAAATGCAGCCAAAGAATAGGCCTATCCTTTGCAGTGACCAGTGTTaGTGCCACTACACTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: QITKSKTVQMQPKNRPILCSDQC*CHYTPA Trigger: GGCTGGAGTGTAGTGGCACAAACACTGGTCACTGCA...AAGGATAGGCCTATTCTTTGGCTGCATTTGTACTGTTTTGCTTTTAGTGATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATAAACAACCGAGATCTCTaGAATTGCCATCTGTCATCT | + |
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Preference number: 5 (lower is better) Translates to: AHRPNSTCSLFILIRFIINNRDL*NCHLSS Trigger: AGATGACAGATGGCAATTCAAGAGATCTCGGTTGTT...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS-3UTR CAA 90 bp | AGATTAAAAGATTTGATAATACCTAGTGTTGGCAAGAGCATGGGGGCCGGGCATTGTACTTGTGATATCTaGGGAGATATTAGGCACATA | + |
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Preference number: 5 (lower is better) Translates to: RLKDLIIPSVGKSMGAGHCTCDI*GDIRHI Trigger: TATGTGCCTAATATCTCCCAAGATATCACAAGTACA...ATGCCCGGCCCCCATGCTCTTGCCAACACTAGGTATTATCAAATCTTTTAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000515303.2 |
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| CDS-3UTR CAA 90 bp | GCCCATAGGCCAAATTCGACCTGCTCCCTTTTTATCTTGATTAGGTTCATCATATCTGCTTTAGATCGTTaGTCTTGTGTATCTAACAAC | + |
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Preference number: 5 (lower is better) Translates to: AHRPNSTCSLFILIRFIISALDR*SCVSNN Trigger: GTTGTTAGATACACAAGACAAACGATCTAAAGCAGA...TATGATGAACCTAATCAAGATAAAAAGGGAGCAGGTCGAATTTGGCCTATGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000321945.12 |
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| CDS CAA 90 bp | GCCGGACCCCGCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTaGAGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGPRPVPRLTVSESV*RCWKASAPSTKPES Trigger: GCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGCGGGGTCCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS GCA 72 bp | CCACCGCGCCCGACCGTGTCCGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PPRPTVSESVLR*WKASAPSTKPE Trigger: CTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTCGGGCGCGGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS CCA 72 bp | CCGCGCCCGACCGTGTCCGAGTCCGTGTTGAGGTGCTaGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PRPTVSESVLRC*KASAPSTKPES Trigger: GCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTCGGGCGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS TCA 72 bp | GCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTTaGGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: APSLGSPCPSPC*GAGKRVRRAQS Trigger: GCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS CAA 72 bp | CGCCCCGTCCCTCGGCTCACCGTGTCCGAGTCCGTGTaGAGGTGCTGGAAAGCGAGTGCGCCGAGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: RPVPRLTVSESV*RCWKASAPSTK Trigger: CTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGACGGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS GCA 72 bp | GTCCCTCGGCTCACCGTGTCCGAGTCCGTGTTGAGGTaGTGGAAAGCGAGTGCGCCGAGCACAAAGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: VPRLTVSESVLR*WKASAPSTKPE Trigger: CTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGGGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS CCA 72 bp | CCTCGGCTCACCGTGTCCGAGTCCGTGTTGAGGTGCTaGAAAGCGAGTGCGCCGAGCACAAAGCCCGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PRLTVSESVLRC*KASAPSTKPES Trigger: GCTCTCGGGCTTTGTGCTCGGCGCACTCGCTTTCCAGCACCTCAACACGGACTCGGACACGGTGAGCCGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503217.2 |
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| CDS GCA 72 bp | CGCTGCATGTCGGTACCACTGCAGAGGGCTGCGAATTaGTTTTGGTGGCCTGCGCCTGCTGAGCGACCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RCMSVPLQRAAN*FWWPAPAERPV Trigger: GACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACATGCAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS GCA 72 bp | TTCCTCTCCCGGAAGGCCGCTGCATGTCGGTACCACTaGAGAGGGCTGCGAATTGCTTTTGGTGGCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: FLSRKAAACRYH*RGLRIAFGGLR Trigger: GCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACATGCAGCGGCCTTCCGGGAGAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS TCA 72 bp | CGTTGTCCCCGATGGTCTCGAACTCGTGGGCTCAGGTaGTTCACCCGCCTCGGCTTCCCAAAGGGCTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RCPRWSRTRGLR*FTRLGFPKGWN Trigger: ATTCCAGCCCTTTGGGAAGCCGAGGCGGGTGAATCACCTGAGCCCACGAGTTCGAGACCATCGGGGACAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511801.1 |
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| CDS CCA 72 bp | TCGGTACCACTGCAGAGGGCTGCGAATTGCTTTTGGTaGCCTGCGCCTGCTGAGCGACCTGTCACAAACATG | + |
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Preference number: 6 (lower is better) Translates to: SVPLQRAANCFW*PAPAERPVTNM Trigger: CATGTTTGTGACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS CCA 72 bp | ATGTCGGTACCACTGCAGAGGGCTGCGAATTGCTTTTaGTGGCCTGCGCCTGCTGAGCGACCTGTCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: MSVPLQRAANCF*WPAPAERPVTN Trigger: GTTTGTGACAGGTCGCTCAGCAGGCGCAGGCCACCAAAAGCAATTCGCAGCCCTCTGCAGTGGTACCGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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| CDS CCA 72 bp | AAACCTGTAAGGAGTCCCTGGTTAGACTCATTTTACTaGACCATCAAGAGCTACTTTGTTTCTTTGTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: KPVRSPWLDSFY*TIKSYFVSLFS Trigger: ACTGAACAAAGAAACAAAGTAGCTCTTGATGGTCCAGTAAAATGAGTCTAACCAGGGACTCCTTACAGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504777.1 |
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| CDS TCA 72 bp | GTCACAAACATGCAAAGCTATCAAAATGAACACGGTTaGCAGGGTCATTTTAAGACAAGCAATGATTACAAG | + |
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Preference number: 6 (lower is better) Translates to: VTNMQSYQNEHG*QGHFKTSNDYK Trigger: CTTGTAATCATTGCTTGTCTTAAAATGACCCTGTCAACCGTGTTCATTTTGATAGCTTTGCATGTTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506553.5 |
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