RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABLIM3 (Homo sapiens)

Ensembl gene IDs: ENSG00000173210

Ensembl transcript IDs: ENST00000309868.12, ENST00000326685.11, ENST00000356541.4, ENST00000502855.1, ENST00000504238.5, ENST00000506113.5, ENST00000508983.5, ENST00000514212.5, ENST00000515171.5, ENST00000515796.1, ENST00000517451.5, ENST00000519549.1

Found 1094 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACATGCCCTGCCGGCTGTAGGTGGGGGAGTCTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGAGGTCCAGGTTCTCGTAGATGTCGC +
Preference number: 1 (lower is better)
Translates to: TCPAGCRWGSLCTPG*RPVSAGGPGSRRCR
Trigger: GCGACATCTACGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAGACTCCCCCACCTACAGCCGGCAGGGCATGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 90 bp TGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACC +
Preference number: 1 (lower is better)
Translates to: WPTLQQEPRTGGGMV*LPCQPTDQRHRPRT
Trigger: GGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 90 bp AGGATGACGCTGCAGGTCTGGCACTTGAAGCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGTGACTGGCCGTGCTTGATCTCCTCC +
Preference number: 1 (lower is better)
Translates to: RMTLQVWHLKQLTCH*LSRARSDWPCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCATCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 90 bp ACAAATCACCAGAGCGGTAGTAGTGGTGAGGTGAGCGGGAGAAGGTaGGGGACATGCCCTGCCGGCTGTAGGTGGGGGAGTCTATGTACC +
Preference number: 1 (lower is better)
Translates to: TNHQSGSSGEVSGRR*GTCPAGCRWGSLCT
Trigger: GGTACATAGACTCCCCCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCTCCCGCTCACCTCACCACTACTACCGCTCTGGTGATTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 90 bp CAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTC +
Preference number: 1 (lower is better)
Translates to: QLCSRSRGLAGVWYG*PASPQTRGIDQEPF
Trigger: GAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAA +
Preference number: 1 (lower is better)
Translates to: KHGQLCSRSRGLAGV*YGCPASPQTRGIDQ
Trigger: TTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 90 bp AGAGAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTaGCCTGCTCCATCTCCCACTTCCGCTCCCTCTCTTTTCCTCTGG +
Preference number: 1 (lower is better)
Translates to: REEGPKKSCSSDSNR*PAPSPTSAPSLFLW
Trigger: CCAGAGGAAAAGAGAGGGAGCGGAAGTGGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 90 bp AGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCT +
Preference number: 1 (lower is better)
Translates to: SSHSSKSFPVKHGQL*SRSRGLAGVWYGCP
Trigger: AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 90 bp GCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGTAGTGGAAGAGGTCTGCGCTGGGTG +
Preference number: 1 (lower is better)
Translates to: AAVHKGRSCTLACPS*LRSCCRSGRGLRWV
Trigger: CACCCAGCGCAGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 90 bp CCCATGGTAGGTCCAGTACTCAGACTCCGAAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTACTTGGAGGTCTGGCTGATGTCTTC +
Preference number: 1 (lower is better)
Translates to: PMVGPVLRLRSIVGV*RVDGTVLGGLADVF
Trigger: GAAGACATCAGCCAGACCTCCAAGTACAGTCCCATCTACTCGCCAGACCCCTACTATGCTTCGGAGTCTGAGTACTGGACCTACCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 90 bp CAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTGGAAGAGGTCTGCGCTGGGTGTCCT +
Preference number: 1 (lower is better)
Translates to: QFIRVDLVLSHAPVD*VHAVVVEEVCAGCP
Trigger: AGGACACCCAGCGCAGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTACCCTTATGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 90 bp GAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTA +
Preference number: 1 (lower is better)
Translates to: ESHKQPLFQKFPCET*PTLQQEPRTGGGMV
Trigger: TACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 90 bp CTCGATGACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAGC +
Preference number: 1 (lower is better)
Translates to: LDDVGLPDSTEKQVS*QAVCPITQERIIPS
Trigger: GCTCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 90 bp CTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATaGCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAG +
Preference number: 1 (lower is better)
Translates to: LLRSLSALHPLCLGT*LTIPAIGRHIPETE
Trigger: CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CCA 90 bp TCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTaGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTG +
Preference number: 1 (lower is better)
Translates to: SHSFSDHFLPYIRYV*VHALRYPLLVGISL
Trigger: CAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR TCA 90 bp TTGTTCAGTTGGAGCTCTGGTGGGAACATTAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGATTGTAATAAGGCTAAAGAATACAAG +
Preference number: 1 (lower is better)
Translates to: LFSWSSGGNISPAVC*VVRHIDCNKAKEYK
Trigger: CTTGTATTCTTTAGCCTTATTACAATCTATGTGCCTGACAACTCAACACACCGCAGGGCTAATGTTCCCACCAGAGCTCCAACTGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 90 bp TCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAGTCAGTTCTACATTTGCCATGTCAC +
Preference number: 1 (lower is better)
Translates to: SVLSIQQVLNIRGAQ*GFVQFKSVLHLPCH
Trigger: GTGACATGGCAAATGTAGAACTGACTTAAATTGAACAAACCCTCACTGAGCACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR TCA 90 bp GCAATCTCTTCCAGAAAGCTTTCCTGGGTCTGCTCTAGCTGCATATaGCTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGA +
Preference number: 1 (lower is better)
Translates to: AISSRKLSWVCSSCI*LFINITHTFSFLLR
Trigger: TCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCTTTCTGGAAGAGATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR TCA 90 bp CTTGAGAGTCATTATTGTCATTTTCACTTCTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAACAG +
Preference number: 1 (lower is better)
Translates to: LESHYCHFHFFILPP*SQNGPTQGFSKKEQ
Trigger: CTGTTCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAGTGAAAATGACAATAATGACTCTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCCGGTGAGGATGACGCTGCAGGTCTGGCACTTGAAGCAGCTGACGTGCCACTGGCTTACTGCTGGCCATaGACTGGGAGCACGTTTGGC +
Preference number: 2 (lower is better)
Translates to: PGEDDAAGLALEAADVPLAYCWP*TGSTFG
Trigger: GCCAAACGTGCTCCCAGTCCATGGCCAGCAGTAAGC...CAGTGGCACGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCATCCTCACCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACTGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 2 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 2 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 90 bp CCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTaGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTT +
Preference number: 2 (lower is better)
Translates to: PTLQQEPRTGGGMVW*PCQPTDQRHRPRTF
Trigger: AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 2 (lower is better)
Translates to: CPASPQTRGIDQEPFFETLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PASPQTRGIDQEPFFETRGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTGGAGCTTGTGCATGCTaGGGTCAAAATCATCCTCCT +
Preference number: 2 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPGACAC*GQNHPP
Trigger: AGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 2 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CAGGTAGTGCGACCGAGGGGAGCCATTGAGGGACATCTCATAGCCAGCTGTGTGCTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 2 (lower is better)
Translates to: QVVRPRGAIEGHLIASCVLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...CACACAGCTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGTCGCACTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACATGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: CPASPQTRGIDQEPFFETWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp AGCTCCGGGGAGGGGTCCAGGGATCTGCATAGGAGCTCGACCGGGCCTTCATTTACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 2 (lower is better)
Translates to: SSGEGSRDLHRSSTGPSFTWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...AAATGAAGGCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCTCCCCGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR GCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGACTGATTTGGGGAGACTaGTGCAGATCTTCCCATGGG +
Preference number: 2 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRLIWGD*CRSSHG
Trigger: CCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAG...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTTGAAGCAGCTGACGTaGCACTGCTTGTCCAGAGCC +
Preference number: 2 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGLKQLT*HCLSRA
Trigger: GGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAA...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 2 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACTTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDFPCET*PTLQQE
Trigger: CTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAA...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCACTTCCCCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 2 (lower is better)
Translates to: KKSCSSDSNRCPAPSPTSPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...GGAAGTGGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GCGGTCAAAATCATCCTCCTCTCCTCCAGACGAGAACCTTCTGGCTCGGGGCACGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: AVKIILLSSRREPSGSGHGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...GTGCCCCGAGCCAGAAGGTTCTCGTCTGGAGGAGAGGAGGATGATTTTGACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATCAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CAA 90 bp AAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTaGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCC +
Preference number: 2 (lower is better)
Translates to: KQPLFQKFPCETWPT*QQEPRTGGGMVWLP
Trigger: GGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGDRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGCGTAGATGTCGCAGATaGCTCGGTTGGGTGACCCAA +
Preference number: 2 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVRRCRR*LGWVTQ
Trigger: TTGGGTCACCCAACCGAGTCATCTGCGACATCTACG...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 2 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTCTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 2 (lower is better)
Translates to: QEPFFETRPIFSLEDDESLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CAA 90 bp TCTTCCTGGGACAGGTGGCGCTCTAAACGGGTCCTGTCTACATCCTaGGGCAGTCGGTTTCTTCCTCTTGTAGTCACCAGCAGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: SSWDRWRSKRVLSTS*GSRFLPLVVTSSSS
Trigger: TGAACTGCTGCTGGTGACTACAAGAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGACCCGTTTAGAGCGCCACCTGTCCCAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 2 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 2 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCAATTTGGGGAGACTGCTaGAGATCTTCCCATGGGAGG +
Preference number: 2 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPIWGDC*RSSHGR
Trigger: CCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAAT...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: CPASPQTRGIDQEPFFETVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTG +
Preference number: 2 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVKHGQL*SRSRGL
Trigger: CAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 2 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCACTTCCCTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 2 (lower is better)
Translates to: KKSCSSDSNRCPAPSPTSLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...GGAAGTGGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGTTGCACCCGGCACAGTaGCTTGGTCCACGAATCTTG +
Preference number: 2 (lower is better)
Translates to: PQESTELLIGGVEKVLRGLHPAQ*LGPRIL
Trigger: CAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAA...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 2 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR GCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACTTATGTTTGGGTACATaGCTTACGATACCCGCTATT +
Preference number: 2 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDLCLGT*LTIPAI
Trigger: AATAGCGGGTATCGTAAGGCATGTACCCAAACATAA...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 2 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGCGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 2 (lower is better)
Translates to: ERGHEAERRETSSGTFFRRPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CAA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATaGGTAGGCATATCCCTGAGACCGAGTCCCAGGTTGACTCACCCC +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPL*VGISLRPSPRLTHP
Trigger: GGGGTGAGTCAACCTGGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGTCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: ERGHEAERRETSSGTFFRSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTCCAAGAACCTTTCTTTaGGACACGGCCTATTTTCTC +
Preference number: 2 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGPRTFL*DTAYFL
Trigger: GAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGG...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCAAACCTCGGAACCTGTaGGGTACATTTCCTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPKPRNL*GTFPLL
Trigger: AAGGAGAGGAAATGTACCTCACAGGTTCCGAGGTTT...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATAGAAGGTGGGGGACATaGCCTGCCGGCTGTAGGTGG +
Preference number: 2 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYRRWGT*PAGCRW
Trigger: CCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 2 (lower is better)
Translates to: PASPQTRGIDQEPFFETRKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 2 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGC +
Preference number: 2 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMGLAGV*YGCPAS
Trigger: GCTGGCAGGGCAACCATACCATACCCCCGCCAGTCC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TCTTGTAGTCACCAGCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCCCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 2 (lower is better)
Translates to: SCSHQQQFIRVDLVLSHAPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...GGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGCTGGTGACTACAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 2 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTTCCTGTCTACATCCTTaGGCAGTCGGTTTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGSCLHP*AVGFFL
Trigger: GAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGA...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGATAAGGCAACTTCCATaGTTGCGTCTGGCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPIRQLP*LRLAGD
Trigger: ATCCCCAGCCAGACGCAATCATGGAAGTTGCCTTAT...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAGGTCCCAAGAAATCCTaGAGCTCTGATTCTAACAGG +
Preference number: 2 (lower is better)
Translates to: CPASPQTRGIDQEPFFETGPKKS*SSDSNR
Trigger: CCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGACTAAAGAATACAAGCTaGAATCATGGGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRLKNTS*NHGLLL
Trigger: AAGGAGAAGCCCATGATTGCAGCTTGTATTCTTTAG...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 2 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAGTCTGGTTGTTCAGTTaGAGCTCTGGTGGGAACATT +
Preference number: 2 (lower is better)
Translates to: CPASPQTRGIDQEPFFETVWLFS*SSGGNI
Trigger: AATGTTCCCACCAGAGCTCCAACTGAACAACCAGAC...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 2 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 2 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHFPCET*PTLQQE
Trigger: CTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAA...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGGCCATGAGCGGTGTTaGCCAACACTTCATTTTGGA +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPGHERC*PTLHFG
Trigger: TCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATCTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 2 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGATTACCCATTCAAGGTaGAAGGTTTGGAGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVITHSR*KVWRGE
Trigger: TTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAAT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGLVHES*WAYCWP
Trigger: TGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAA...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCCTGATTTGGGGAGACTaGTGCAGATCTTCCCATGGG +
Preference number: 2 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFLIWGD*CRSSHG
Trigger: CCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAG...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGGCTCAACATCAGAGGTaGTCAGTGAGGGTTTGTTCA +
Preference number: 2 (lower is better)
Translates to: ERGHEAERRETSSGTFFRAQHQR*SVRVCS
Trigger: TGAACAAACCCTCACTGAGCACCTCTGATGTTGAGC...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGT +
Preference number: 2 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSQLTCH*LSRARS
Trigger: ACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTG...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTCCAGAAAGCTTTCCTaGGTCTGCTCTAGCTGCATA +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPSRKLS*VCSSCI
Trigger: TATGCAGCTAGAGCAGACCCAGGAAAGCTTTCTGGA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGGTCGGACTCACAGTATaGAACACCATCCTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEVGLTV*NTILAD
Trigger: ATCAGCAAGGATGGTGTTCCATACTGTGAGTCCGAC...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 2 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGCCAACACTTCATTTTaGAATCTCATAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGANTSF*NLISSH
Trigger: GTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGC...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATGGCAGCGTACACACCTaGCACAGGTTGGGTGGTAGT +
Preference number: 2 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDGSVHT*HRLGGS
Trigger: ACTACCACCCAACCTGTGCCAGGTGTGTACGCTGCC...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTTCGGTGAACATCTGGTaGCAGCGTACACACCTGGCA +
Preference number: 2 (lower is better)
Translates to: QEPFFETRPIFSLEDDESSVNIW*QRTHLA
Trigger: TGCCAGGTGTGTACGCTGCCACCAGATGTTCACCGA...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 2 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTTCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 2 (lower is better)
Translates to: QEPFFETRPIFSLEDDESSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 2 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 2 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATCTAAAGAATACAAGCTaGAATCATGGGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: EATGKIQDGHERCWPTLHLKNTS*NHGLLL
Trigger: AAGGAGAAGCCCATGATTGCAGCTTGTATTCTTTAG...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCCCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 2 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 2 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAATTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 2 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 2 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 2 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 2 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CAA 90 bp GGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTTaGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: GKSRMAMSGVGQHFI*ESHKQPLFQKFPCE
Trigger: TTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATCTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATCCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 2 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: QEPFFETRPIFSLEDDESSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: LSALHPLCLGTCLTIPAISMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGCTCACCCTTTTAACTaGATTGCCCCAAGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYAHPFN*IAPREH
Trigger: GTGCTCTCTTGGGGCAATGCAGTTAAAAGGGTGAGC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGTTATGTTTGGGTACATaGCTTACGATACCCGCTATT +
Preference number: 2 (lower is better)
Translates to: VWVHALRYPLLVGISLRPLCLGT*LTIPAI
Trigger: AATAGCGGGTATCGTAAGGCATGTACCCAAACATAA...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGCTGAATTTCCTCAGATaGAATCTCTTCCAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPLNFLR*NLFQKA
Trigger: AGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAG...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TCTTGTAGTCACCAGCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCTTTGGAGCTTGTGCATaGTGCGGTCAAAATCATCCT +
Preference number: 2 (lower is better)
Translates to: SCSHQQQFIRVDLVLSHAFGACA*CGQNHP
Trigger: AGGATGATTTTGACCGCAGCATGCACAAGCTCCAAA...GGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGCTGGTGACTACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CAA 90 bp TTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTaGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCT +
Preference number: 2 (lower is better)
Translates to: FSFLLRSLSALHPLC*GTCLTIPAIGRHIP
Trigger: AGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAATTGGTGCTTTCATTTTaGAAAATGTGCAGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: WRMMRVVCLVVQLELWWELVLSF*KMCRVQ
Trigger: CTGAACCCTGCACATTTTTCAAAATGAAAGCACCAA...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
3UTR-3UTR GCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 2 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCGCTCACCCTTTTAACTaGATTGCCCCAAGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFAHPFN*IAPREH
Trigger: GTGCTCTCTTGGGGCAATGCAGTTAAAAGGGTGAGC...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATGCTCACCCTTTTAACTaGATTGCCCCAAGAGAGCAC +
Preference number: 2 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDAHPFN*IAPREH
Trigger: GTGCTCTCTTGGGGCAATGCAGTTAAAAGGGTGAGC...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAATTATGTTTGGGTACATaGCTTACGATACCCGCTATT +
Preference number: 2 (lower is better)
Translates to: WRMMRVVCLVVQLELWWELCLGT*LTIPAI
Trigger: AATAGCGGGTATCGTAAGGCATGTACCCAAACATAA...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACTGAATTTCCTCAGATaGAATCTCTTCCAGAAAGCT +
Preference number: 2 (lower is better)
Translates to: WRMMRVVCLVVQLELWWELNFLR*NLFQKA
Trigger: AGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAG...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 2 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR TCA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATCCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 2 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACCAAGAACCTTTCTTTaGGACACGGCCTATTTTCTC +
Preference number: 2 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTPRTFL*DTAYFL
Trigger: GAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGG...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 2 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCTACAAAGATCCTTCCTaGATTTCCTCAGATGCAATC +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGYKDPS*ISSDAI
Trigger: GATTGCATCTGAGGAAATTCAGGAAGGATCTTTGTA...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATTCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 2 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCTCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 2 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCTACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 2 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 2 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 2 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCATTACCCATTCAAGGTaGAAGGTTTGGAGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFITHSR*KVWRGE
Trigger: TTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAAT...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATACATCGCCAGCCTCTTaGGAGTCATTATTGTCATTT +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDTSPAS*ESLLSF
Trigger: AAATGACAATAATGACTCTCAAGAGGCTGGCGATGT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR TCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTTGGTGCTTTCATTTTaGAAAATGTGCAGGGTTCAG +
Preference number: 2 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMLVLSF*KMCRVQ
Trigger: CTGAACCCTGCACATTTTTCAAAATGAAAGCACCAA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
3UTR-3UTR CCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACTTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 2 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATGCCAACACTTCATTTTaGAATCTCATAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHANTSF*NLISSH
Trigger: GTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGC...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACATACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 2 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR GCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATTTATGTTTGGGTACATaGCTTACGATACCCGCTATT +
Preference number: 2 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDLCLGT*LTIPAI
Trigger: AATAGCGGGTATCGTAAGGCATGTACCCAAACATAA...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp GCCGGCTGTAGGTGGGGGAGTCTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGAGGTCCAGGTTCTCGT +
Preference number: 3 (lower is better)
Translates to: AGCRWGSLCTPG*RPVSAGGPGSR
Trigger: ACGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAGACTCCCCCACCTACAGCCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 72 bp CAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGC +
Preference number: 3 (lower is better)
Translates to: QLCSRSRGLAGV*YGCPASPQTRG
Trigger: GCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACAGTGACTGGCCGTGCTaGATCTCCTCCTTGCACCCG +
Preference number: 3 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDSDWPC*ISSLHP
Trigger: CGGGTGCAAGGAGGAGATCAAGCACGGCCAGTCACT...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 72 bp GAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTaGCAGCCCACAGACCAGAGGCATAGACCAAGAACC +
Preference number: 3 (lower is better)
Translates to: EPRTGGGMVWLP*QPTDQRHRPRT
Trigger: GGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp AGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACCAGAGGCATAGACCAA +
Preference number: 3 (lower is better)
Translates to: SRSRGLAGVWYG*PASPQTRGIDQ
Trigger: TTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp TTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGA +
Preference number: 3 (lower is better)
Translates to: LQQEPRTGGGMV*LPCQPTDQRHR
Trigger: TCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 72 bp CCTTGCACCCGGCACAGTGGCTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCATGGACTGGGAGCACG +
Preference number: 3 (lower is better)
Translates to: PCTRHSGLVHES*WAYCWPWTGST
Trigger: CGTGCTCCCAGTCCATGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 72 bp CTGCAGGTCTGGCACTTGAAGCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGTGACTGGCCGTGCTTG +
Preference number: 3 (lower is better)
Translates to: LQVWHLKQLTCH*LSRARSDWPCL
Trigger: CAAGCACGGCCAGTCACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAAGTGCCAGACCTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR TCA 72 bp TGTAGACAAATCACCAGAGCGGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGACATGCCCTGCCGGCT +
Preference number: 3 (lower is better)
Translates to: CRQITRAVVVVR*AGEGGGHALPA
Trigger: AGCCGGCAGGGCATGTCCCCCACCTTCTCCCGCTCACCTCACCACTACTACCGCTCTGGTGATTTGTCTACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTACCCTTTTAACTGCATaGCCCCAAGAGAGCACTGAG +
Preference number: 3 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPTLLTA*PQESTE
Trigger: CTCAGTGCTCTCTTGGGGCAATGCAGTTAAAAGGGT...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGACCGAGTCCCAGGTaGACTCACCCCGTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPRPSPR*THPVLP
Trigger: GGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTCT...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAACCCTTTTAACTGCATaGCCCCAAGAGAGCACTGAG +
Preference number: 3 (lower is better)
Translates to: LQVQVRQRGQLEVVEGRETLLTA*PQESTE
Trigger: CTCAGTGCTCTCTTGGGGCAATGCAGTTAAAAGGGT...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCAGACCGAGTCCCAGGTaGACTCACCCCGTGCTCCCC +
Preference number: 3 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGRPSPR*THPVLP
Trigger: GGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTCT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp TTCTTCTCTGCCCGGGCTGCCTGTTTGCAGATGGGGTaGCAAACCTCGGAACCTGTGAGGTACATTTCCTCT +
Preference number: 3 (lower is better)
Translates to: FFSARAACLQMG*QTSEPVRYISS
Trigger: AGAGGAAATGTACCTCACAGGTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAGCCCGGGCAGAGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 72 bp GTTGACTGCGTTCATGCTGTCGTAGTGGAAGAGGTCTaGGCTGGGTGTCCTGTGCAGCCCATTTCTTCGGTA +
Preference number: 3 (lower is better)
Translates to: VDCVHAVVVEEV*AGCPVQPISSV
Trigger: TACCGAAGAAATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCCACTACGACAGCATGAACGCAGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 72 bp AAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGG +
Preference number: 3 (lower is better)
Translates to: KQPLFQKFPCET*PTLQQEPRTGG
Trigger: CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp GGTCCAGTACTCAGACTCCGAAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTACTTGGAGGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: GPVLRLRSIVGV*RVDGTVLGGLA
Trigger: AGCCAGACCTCCAAGTACAGTCCCATCTACTCGCCAGACCCCTACTATGCTTCGGAGTCTGAGTACTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTACCAAGAACCTTTCTTaGAGACACGGCCTATTTTCT +
Preference number: 3 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPTKNLS*RHGLFS
Trigger: AGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGT...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp GGGGTGTTGAGAAAGTTCTTCGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGACTGCTGCAGATCTTCC +
Preference number: 3 (lower is better)
Translates to: GVLRKFFVGAQR*SLIWGDCCRSS
Trigger: GGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACGAAGAACTTTCTCAACACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTCAGTGAGGGTTTGTTC +
Preference number: 3 (lower is better)
Translates to: SPSPIQCSVFSR*STSEVLSEGLF
Trigger: GAACAAACCCTCACTGAGCACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp AGGGTAGATCTTGTACTCTCGCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTGGAAGAGGTCTGCGCT +
Preference number: 3 (lower is better)
Translates to: RVDLVLSHAPVD*VHAVVVEEVCA
Trigger: AGCGCAGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCTCGATGACGTGGGCTaGCCTGACAGTACAGAAAAG +
Preference number: 3 (lower is better)
Translates to: VHALRYPLLVGISLRPSPLDDVG*PDSTEK
Trigger: CTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGGAAACATGGCCAACTTaGCAGCAGGAGCCGAGGACT +
Preference number: 3 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPETWPT*QQEPRT
Trigger: AGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTC...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGACTGCAGGTCTGGCACTaGAAGCAGCTGACGTGCCAC +
Preference number: 3 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRLQVWH*KQLTCH
Trigger: GTGGCACGTCAGCTGCTTCAAGTGCCAGACCTGCAG...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAGCCCGGGCTGCCTGTTaGCAGATGGGGTGCCAAACC +
Preference number: 3 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALARAAC*QMGCQT
Trigger: GGTTTGGCACCCCATCTGCAAACAGGCAGCCCGGGC...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTCGCAGATGACTCGGTaGGGTGACCCAATGCTGGAT +
Preference number: 3 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPSQMTR*GDPMLD
Trigger: ATCCAGCATTGGGTCACCCAACCGAGTCATCTGCGA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR GCA 72 bp TCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTGGCGGGGGTATGGTAT +
Preference number: 3 (lower is better)
Translates to: SSKSFPVKHGQL*SRSRGLAGVWY
Trigger: ATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGGGGGTATGGTATGGTaGCCCTGCCAGCCCACAGAC +
Preference number: 3 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMGGMVW*PCQPTD
Trigger: GTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGAAACATGGCCAACTTaGCAGCAGGAGCCGAGGACT +
Preference number: 3 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEETWPT*QQEPRT
Trigger: AGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACCCTTTTAACTGCATaGCCCCAAGAGAGCACTGAG +
Preference number: 3 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRTLLTA*PQESTE
Trigger: CTCAGTGCTCTCTTGGGGCAATGCAGTTAAAAGGGT...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGACCCTTTTAACTGCATaGCCCCAAGAGAGCACTGAG +
Preference number: 3 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRTLLTA*PQESTE
Trigger: CTCAGTGCTCTCTTGGGGCAATGCAGTTAAAAGGGT...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTCCAGGAATCCTAGATTaGGACAAGGGAGAGGTTACA +
Preference number: 3 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGPGILD*DKGEVT
Trigger: TGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 72 bp AGGAAGGGAAGCCACTGGGAAAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACTTCATTTTGGAATCTC +
Preference number: 3 (lower is better)
Translates to: RKGSHWENPGWP*AVLANTSFWNL
Trigger: GAGATTCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTCCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 72 bp CATAAGGGTAGATCTTGTACTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGTAGTGGAAGAGGTCTG +
Preference number: 3 (lower is better)
Translates to: HKGRSCTLACPS*LRSCCRSGRGL
Trigger: CAGACCTCTTCCACTACGACAGCATGAACGCAGTCAACTGGGGCATGCGAGAGTACAAGATCTACCCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCCTCGATGACGTGGGCTaGCCTGACAGTACAGAAAAG +
Preference number: 3 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFLDDVG*PDSTEK
Trigger: CTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAG...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCAAGGTGCTCACTGATTaGGGGAGACTGCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGKVLTD*GRLLQI
Trigger: GATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGAGTTGTCTGTCTGGTaGTTCAGTTGGAGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEELSVW*FSWSSG
Trigger: ACCAGAGCTCCAACTGAACAACCAGACAGACAACTC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGAAGTCAGTTCTACATTaGCCATGTCACATCGCCAGC +
Preference number: 3 (lower is better)
Translates to: ERGHEAERRETSSGTFFRKSVLH*PCHIAS
Trigger: GCTGGCGATGTGACATGGCAAATGTAGAACTGACTT...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp GTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATTACACAAGAGAGGATT +
Preference number: 3 (lower is better)
Translates to: VGLPDSTEKQVS*QAVCPITQERI
Trigger: AATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGGGCCAACACTTCATTTaGGAATCTCATAAGCAGCCA +
Preference number: 3 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPGQHFI*ESHKQP
Trigger: TGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGCC...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGCACATCGCCAGCCTCTaGAGAGTCATTATTGTCATT +
Preference number: 3 (lower is better)
Translates to: VWVHALRYPLLVGISLRPHIASL*RVIIVI
Trigger: AATGACAATAATGACTCTCAAGAGGCTGGCGATGTG...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGCACATCGCCAGCCTCTaGAGAGTCATTATTGTCATT +
Preference number: 3 (lower is better)
Translates to: ERGHEAERRETSSGTFFRHIASL*RVIIVI
Trigger: AATGACAATAATGACTCTCAAGAGGCTGGCGATGTG...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATCTTGGTCCACGAATCTaGATGGGCTTACTGCTGGCC +
Preference number: 3 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYLGPRI*MGLLLA
Trigger: GGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAAG...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATTCTCGCATGCCCCAGTaGACTGCGTTCATGCTGTCG +
Preference number: 3 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDSRMPQ*TAFMLS
Trigger: CGACAGCATGAACGCAGTCAACTGGGGCATGCGAGA...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCAAGTCAGTTCTACATTaGCCATGTCACATCGCCAGC +
Preference number: 3 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGKSVLH*PCHIAS
Trigger: GCTGGCGATGTGACATGGCAAATGTAGAACTGACTT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATTCCACTTTGGAGCTaGTGCATGCTGCGGTCAAAA +
Preference number: 3 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGIPLWS*CMLRSK
Trigger: TTTTGACCGCAGCATGCACAAGCTCCAAAGTGGAAT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR-3UTR CAA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGTCACTTGTTTTGCTCTaGGTTGCTGTAGACAAATCA +
Preference number: 3 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRSLVLL*VAVDKS
Trigger: TGATTTGTCTACAGCAACCAAGAGCAAAACAAGTGA...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
3UTR CCA 72 bp TTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTaGGTACATGCCTTACGATACCCGCTATTGGTAGGC +
Preference number: 3 (lower is better)
Translates to: FSDHFLPYIRYV*VHALRYPLLVG
Trigger: GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACCTCGATGACGTGGGCTaGCCTGACAGTACAGAAAAG +
Preference number: 3 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHLDDVG*PDSTEK
Trigger: CTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAG...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCAAGGTGCTCACTGATTaGGGGAGACTGCTGCAGATC +
Preference number: 3 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFKVLTD*GRLLQI
Trigger: GATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTT...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGGAGTTGTCTGTCTGGTaGTTCAGTTGGAGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLELSVW*FSWSSG
Trigger: ACCAGAGCTCCAACTGAACAACCAGACAGACAACTC...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp AGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGCAAGTCTCATGGCAGG +
Preference number: 3 (lower is better)
Translates to: SKEHKNISMTWA*LTVQKSKSHGR
Trigger: CCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR GCA 72 bp TCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATaGCTTACGATACCCGCTATTGGTAGGCATATCCCT +
Preference number: 3 (lower is better)
Translates to: SLSALHPLCLGT*LTIPAIGRHIP
Trigger: AGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp TTTTCACTTCTTCATCCTTCCTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTCCAAGAAGGAACAGCC +
Preference number: 3 (lower is better)
Translates to: FSLLHPSSMISK*SDSRLLQEGTA
Trigger: GGCTGTTCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAGTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACCCCTGTCCACTTCTGTaGACTGGTGTAATGACTAGA +
Preference number: 3 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHPCPLL*TGVMTR
Trigger: TCTAGTCATTACACCAGTCAACAGAAGTGGACAGGG...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACCCAGGAATCCTAGATTaGGACAAGGGAGAGGTTACA +
Preference number: 3 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHPGILD*DKGEVT
Trigger: TGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATTTACGATACCCGCTATaGGTAGGCATATCCCTGAGA +
Preference number: 3 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDLRYPL*VGISLR
Trigger: TCTCAGGGATATGCCTACCAATAGCGGGTATCGTAA...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp AAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAG +
Preference number: 3 (lower is better)
Translates to: KNLSLRHGLFSL*RMMRVVCLVVQ
Trigger: CTGAACAACCAGACAGACAACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR-3UTR CAA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATCCAGGAATCCTAGATTaGGACAAGGGAGAGGTTACA +
Preference number: 3 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHPGILD*DKGEVT
Trigger: TGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR TCA 72 bp CATTATTGTCATTTTCACTTCTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACTCAAGGCTTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: HYCHFHFFILPP*SQNGPTQGFSK
Trigger: CTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAGTGAAAATGACAATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CCA 72 bp AGAGAAAGTAAGGAGCATAAAAATATCTCGATGACGTaGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCAT +
Preference number: 3 (lower is better)
Translates to: RESKEHKNISMT*ACLTVQKSKSH
Trigger: ATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTGGGGTTGGCAGCGCCTaGTCGCGCGCACCCCGGACT +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPGVGSA*SRAPRT
Trigger: AGTCCGGGGTGCGCGCGAGCAGGCGCTGCCAACCCC...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDLCTPG*RPVSAG
Trigger: TCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAG...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAGGTAGTGCGACCGAGGGGAGCCATTGAGGGACATCTCATAGCCAGCTGTGTGCTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QVVRPRGAIEGHLIASCVLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...CACACAGCTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGTCGCACTACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGGGCTTCCCGGCTGCTaGTGGAGCTCCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGGLPGC*WSSGEG
Trigger: CCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp CAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTaGCCCTGCCAGCCCACAGACCAGAGGCATAGACCA +
Preference number: 4 (lower is better)
Translates to: QQEPRTGGGMVW*PCQPTDQRHRP
Trigger: TGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTGCGCCCCGGTCCTCCTaGTCCTCAGATTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPAPRSS*SSDWNP
Trigger: GGGATTCCAATCTGAGGAGCAGGAGGACCGGGGCGC...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCAGGGCTTCCCGGCTGCTaGTGGAGCTCCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPGLPGC*WSSGEG
Trigger: CCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCC...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAGGAGCTCGACATCCATaGTGCGGGCTCGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREGARHP*CGLAGW
Trigger: CCAACCCGCGAGCCCGCATCATGGATGTCGAGCTCC...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVLCTPG*RPVSAG
Trigger: TCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCACTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCGGGCAGAAGTGGGGTTaGCAGCGCCTGCTCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPGQKWG*QRLLAR
Trigger: GCGCGCGAGCAGGCGCTGCCAACCCCACTTCTGCCC...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCAGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPDRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGCGCCCCGGTCCTCCTaGTCCTCAGATTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVAPRSS*SSDWNP
Trigger: GGGATTCCAATCTGAGGAGCAGGAGGACCGGGGCGC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTCTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTCCGGGGAGGGGTCCAGGGATCTGCATAGGAGCTCGACCGGGCCTTCATTTGGCAGCGTACACACCTaGCACAGGTTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SSGEGSRDLHRSSTGPSFGSVHT*HRLGGS
Trigger: ACTACCACCCAACCTGTGCCAGGTGTGTACGCTGCC...AAATGAAGGCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCTCCCCGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATCTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGGGCTTCCCGGCTGCTaGTGGAGCTCCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPGLPGC*WSSGEG
Trigger: CCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTCTTCCTGGGACAGGTaGCGCTCTAAACGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPSSWDR*RSKRVL
Trigger: CAGGACCCGTTTAGAGCGCCACCTGTCCCAGGAAGA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp CACTGCTTGTCCAGAGCCAGGAGTGACTGGCCGTGCTaGATCTCCTCCTTGCACCCGGCACAGTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HCLSRARSDWPC*ISSLHPAQWLG
Trigger: ACCAAGCCACTGTGCCGGGTGCAAGGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGACAAGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCTCCGGGGAGGGGTCCAGGGATCTGCATAGGAGCTCGACCGGGCCTTCATTTGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSGEGSRDLHRSSTGPSFAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...AAATGAAGGCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCTCCCCGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTCTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: LPLPHSVLSIQQVLNIRGLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...ACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAAATCATCCTCCTCTCCTCCAGACGAGAACCTTCTGGCTCGGGGCACTTTGGGCTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: KIILLSSRREPSGSGHFGLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...CCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTGGAGGAGAGGAGGATGATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACC +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREGVWYG*PASPQT
Trigger: GGTCTGTGGGCTGGCAGGGCAACCATACCATACCCC...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGGGGTTGGCAGCGCCTaGTCGCGCGCACCCCGGACT +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEGVGSA*SRAPRT
Trigger: AGTCCGGGGTGCGCGCGAGCAGGCGCTGCCAACCCC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGCTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCAGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAGCAGGAGCCGAGGACTaGCGGGGGTATGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRAGAED*RGYGMV
Trigger: AACCATACCATACCCCCGCCAGTCCTCGGCTCCTGC...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTCCTGCTCCTCAGATTaGAATCCCGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPSCSSD*NPGQKW
Trigger: CCACTTCTGCCCGGGATTCCAATCTGAGGAGCAGGA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGACTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRLACPS*LRSCCR
Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVLACPS*LRSCCR
Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCGCAGATGACTCGGTTGGGTGACCCAATGCTGGATCCAGGGGGTGAGATGGAGGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SQMTRLGDPMLDPGGEMEAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...CTCCATCTCACCCCCTGGATCCAGCATTGGGTCACCCAACCGAGTCATCTGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPDRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGACAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRQLTCH*LSRARS
Trigger: ACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTG...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTCTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCGGTGAGGATGACGCTGCAGGTCTGGCACTTGAAGCAGCTGACGTGCCACTGATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 4 (lower is better)
Translates to: PGEDDAAGLALEAADVPLIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...CAGTGGCACGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCATCCTCACCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCACCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTCCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: LPLPHSVLSIQQVLNIRGPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...ACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGGGCTTCCCGGCTGCTaGTGGAGCTCCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGGLPGC*WSSGEG
Trigger: CCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGAGCGGTAGCACTGGATaGCATTGGAGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVSGSTG*HWSCPV
Trigger: CACGGGGCAGCTCCAATGTCATCCAGTGCTACCGCT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCAGCGGTAGCACTGGATaGCATTGGAGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSGSTG*HWSCPV
Trigger: CACGGGGCAGCTCCAATGTCATCCAGTGCTACCGCT...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCTTGAAGAAGAAGCCTaGCTGGGCCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRLEEEA*LGQATA
Trigger: GGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTTCAAG...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AAAATCATCCTCCTCTCCTCCAGACGAGAACCTTCTGGCTCGGGGCACTTTGGGGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: KIILLSSRREPSGSGHFGVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...CCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTGGAGGAGAGGAGGATGATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTACCGAGGGGAGCCATTaGGGGACATCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGTEGSH*GTSHSQ
Trigger: CTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGT...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAACTAATAGGCGCAGGTaGGAGCAAGGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGRETNRRR*EQGEGG
Trigger: GCCTCCTTCTCCTTGCTCTCACCTGCGCCTATTAGT...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACCCTCCCCCATTCAGTaGTCAGTATTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVPSPIQ*SVFSRC
Trigger: GCACCTGCTGAATACTGAGCACTGAATGGGGGAGGG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGATCCTGGTCCTCGTCTaGGGTCTCGAATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGILVLV*GLEFQG
Trigger: GCCCTGGAATTCGAGACCCCAGACGAGGACCAGGAT...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR CCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCACCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTTGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGACTTCCCGGCTGCTGGTaGAGCTCCGGGGAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRLPGCW*SSGEGS
Trigger: GGACCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAG...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVGLAGV*YGCPAS
Trigger: GCTGGCAGGGCAACCATACCATACCCCCGCCAGTCC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFGLAGV*YGCPAS
Trigger: GCTGGCAGGGCAACCATACCATACCCCCGCCAGTCC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCAGCAGGAGCCGAGGACTaGCGGGGGTATGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPAGAED*RGYGMV
Trigger: AACCATACCATACCCCCGCCAGTCCTCGGCTCCTGC...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATGTCCCCTCTCTGTCTaGGCTGTAGCCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPCPLSV*AVAPGL
Trigger: AAGGCCAGGGGCTACAGCCCAGACAGAGAGGGGACA...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACTGCGACTGATTTCATaGATCCTGGTCCTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVLRLIS*ILVLVW
Trigger: CCAGACGAGGACCAGGATTCATGAAATCAGTCGCAG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCCCCGGCCCCTGCGACTaGTTTCATGAATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVPGPCD*FHESWS
Trigger: GGACCAGGATTCATGAAATCAGTCGCAGGGGCCGGG...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGCTTGAAGAAGAAGCCTaGCTGGGCCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGLEEEA*LGQATA
Trigger: GGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTTCAAG...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGAGGCTCATAGGAAATaGGGTCGGGGCGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGEAHRK*GRGVVP
Trigger: AGGTACAACGCCCCGACCTCATTTCCTATGAGCCTC...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR TCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFVVVVR*AGEGGG
Trigger: TCCCCCACCTTCTCCCGCTCACCTCACCACTACTAC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGACCGAGGGGAGCCATTaGGGGACATCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVTEGSH*GTSHSQ
Trigger: CTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAATTTGGGGAGACTGCTaGAGATCTTCCCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRIWGDC*RSSHGR
Trigger: CCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAAT...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVGVWYG*PASPQT
Trigger: GGTCTGTGGGCTGGCAGGGCAACCATACCATACCCC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCACTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGGGCAGCGTACACACCTaGCACAGGTTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVGSVHT*HRLGGS
Trigger: ACTACCACCCAACCTGTGCCAGGTGTGTACGCTGCC...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTCCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCCAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGGGCTTCCCGGCTGCTaGTGGAGCTCCGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTGLPGC*WSSGEG
Trigger: CCCCTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCTCTTCCTGGGACAGGTaGCGCTCTAAACGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSSWDR*RSKRVL
Trigger: CAGGACCCGTTTAGAGCGCCACCTGTCCCAGGAAGA...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTGGCGGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: LAGVWYGCPASPQTRGIDKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...GTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCCGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTACCTCACTCATCACCTaGGGGGTGAAAAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGTSLIT*GVKRQS
Trigger: GGACTGCCTTTTCACCCCCCAGGTGATGAGTGAGGT...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTACCACAGCCACATACTTaGCAGGTGAAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVPQPHT*QVKHLM
Trigger: CATCAGATGCTTCACCTGTCAAGTATGTGGCTGTGG...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCACTTCCGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: KKSCSSDSNRCPAPSPTSVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...GGAAGTGGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCACCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: LPLPHSVLSIQQVLNIRGNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...ACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCTTGTAGTCACCAGCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SCSHQQQFIRVDLVLSHADRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...GGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGCTGGTGACTACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGGACCACTTCCCCTTTaGAGGTGTCTCCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHGPLPL*RCLHSG
Trigger: ACCGCTGTGGAGACACCTGCAAAGGGGAAGTGGTCC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGCTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGAGSPG*RCTPGS
Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAGC...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTAGCTGTCACAGCGGGTaGCATAGAGTTGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGSCHSG*HRVAGS
Trigger: ACTACCAGCAACTCTATGGCACCCGCTGTGACAGCT...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPQLTCH*LSRARS
Trigger: ACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAGGAGCTTGTGCATGCTaGGGTCAAAATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRGACAC*GQNHPP
Trigger: AGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCCCTCCCCCATTCAGTaGTCAGTATTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPPSPIQ*SVFSRC
Trigger: GCACCTGCTGAATACTGAGCACTGAATGGGGGAGGG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCCTCCCCCATTCAGTaGTCAGTATTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRPSPIQ*SVFSRC
Trigger: GCACCTGCTGAATACTGAGCACTGAATGGGGGAGGG...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAATTGGAGCTGCCCCGTaGATTGTAAGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVIGAAP*IVRILL
Trigger: CAGCAGAATCCTTACAATCCACGGGGCAGCTCCAAT...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGCTTACTGCTGGCCATaGACTGGGAGCACGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHAYCWP*TGSTFG
Trigger: GCCAAACGTGCTCCCAGTCCATGGCCAGCAGTAAGC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATCCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCTCGGTGAACATCTGGTaGCAGCGTACACACCTGGCA +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSVNIW*QRTHLA
Trigger: TGCCAGGTGTGTACGCTGCCACCAGATGTTCACCGA...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGTGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGACTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRLCTPG*RPVSAG
Trigger: TCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAG...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTTCTTCCTGGGACAGGTaGCGCTCTAAACGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFSSWDR*RSKRVL
Trigger: CAGGACCCGTTTAGAGCGCCACCTGTCCCAGGAAGA...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGGCGGGGGTATGGTATaGTTGCCCTGCCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEGGGMV*LPCQPT
Trigger: TGTGGGCTGGCAGGGCAACCATACCATACCCCCGCC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTTCCATGATTGCGTCTaGCTGGGGATGATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPFHDCV*LGMILK
Trigger: CTTTAGAATCATCCCCAGCCAGACGCAATCATGGAA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTGTCCCCTCTCTGTCTaGGCTGTAGCCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPCPLSV*AVAPGL
Trigger: AAGGCCAGGGGCTACAGCCCAGACAGAGAGGGGACA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGGGCAGAAGTGGGGTTaGCAGCGCCTGCTCGCGCGC +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTGQKWG*QRLLAR
Trigger: GCGCGCGAGCAGGCGCTGCCAACCCCACTTCTGCCC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp AAAGTTCTTCGTGGGCGCTCAAAGGTGCTCACTGATTaGGGGAGACTGCTGCAGATCTTCCCATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: KVLRGRSKVLTD*GRLLQIFPWEG
Trigger: GCCCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACGAAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp GACAGGTGGCGCTCTAAACGGGTCCTGTCTACATCCTaGGGCAGTCGGTTTCTTCCTCTTGTAGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: DRWRSKRVLSTS*GSRFLPLVVTS
Trigger: GCTGGTGACTACAAGAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGACCCGTTTAGAGCGCCACCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAAGCGGTAGCACTGGATaGCATTGGAGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWESGSTG*HWSCPV
Trigger: CACGGGGCAGCTCCAATGTCATCCAGTGCTACCGCT...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLPHSVLSIQQVLNIRGLVHES*WAYCWP
Trigger: TGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAA...ACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGAGCTTGTGCATGCTGCGGTCAAAATCATCCTCCTCTCCTCCAGACGAGAACCTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: GACACCGQNHPPLLQTRTLVHES*WAYCWP
Trigger: TGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAA...GGTTCTCGTCTGGAGGAGAGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGATGACTCGGTTGGGTaGCCCAATGCTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPDDSVG*PNAGSR
Trigger: CCTGGATCCAGCATTGGGTCACCCAACCGAGTCATC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGRETWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACAGGTGGCGCTCTAAACGGGTCCTGTCTACATCCTTGGGCAGTCGGTTTCTTCAGCTGTCACAGCGGGTaGCATAGAGTTGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TGGALNGSCLHPWAVGFFSCHSG*HRVAGS
Trigger: ACTACCAGCAACTCTATGGCACCCGCTGTGACAGCT...GAAGAAACCGACTGCCCAAGGATGTAGACAGGACCCGTTTAGAGCGCCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATGCTTCCTGCACAAGCTaGACACGAAGCACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHASCTS*TRSTWG
Trigger: ACCCCAAGTGCTTCGTGTGCAGCTTGTGCAGGAAGC...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPQLTCH*LSRARS
Trigger: ACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTG...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCTTGAAGCAGCTGACGTaGCACTGCTTGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPLKQLT*HCLSRA
Trigger: GGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAA...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAAGAAGGTGGGGGACATaGCCTGCCGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRRRWGT*PAGCRW
Trigger: CCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCT...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGGAGCTTGTGCATGCTaGGGTCAAAATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGGACAC*GQNHPP
Trigger: AGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACGCAGGGCTTCCCGGCTaGTGGTGGAGCTCCGGGGAG +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHAGLPG*WWSSGE
Trigger: CTCCCCGGAGCTCCACCAGCAGCCGGGAAGCCCTGC...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPHAPVD*VHAVVV
Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGATTTGGGGAGACTGCTaGAGATCTTCCCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVIWGDC*RSSHGR
Trigger: CCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAAT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCTGATTTGGGGAGACTaGTGCAGATCTTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPLIWGD*CRSSHG
Trigger: CCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGCTGATTTGGGGAGACTaGTGCAGATCTTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVLIWGD*CRSSHG
Trigger: CCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAG...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGGTCCCAAGAAATCCTaGAGCTCTGATTCTAACAGG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVGPKKS*SSDSNR
Trigger: CCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTACCCCGGACTATTCCTaGCCAGCGGCTCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESTPDYS*PAAPEP
Trigger: GGGCTCCGGAGCCGCTGGGCAGGAATAGTCCGGGGT...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506113.5
CDS-3UTR CCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGATCCTGGTCCTCGTCTaGGGTCTCGAATTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRILVLV*GLEFQG
Trigger: GCCCTGGAATTCGAGACCCCAGACGAGGACCAGGAT...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCACATCTGATGTGGAAGTaGTTGTTGTGCACGCGGACC +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPHLMWK*LLCTRT
Trigger: GGTCCGCGTGCACAACAACCACTTCCACATCAGATG...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGCATCTGATGTGGAAGTaGTTGTTGTGCACGCGGACC +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVHLMWK*LLCTRT
Trigger: GGTCCGCGTGCACAACAACCACTTCCACATCAGATG...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTGCACACGAAGCACTTaGGGTGGTAAGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPCTRST*GGKCGP
Trigger: TGGGCCGCACTTACCACCCCAAGTGCTTCGTGTGCA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGCTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTTTGCACCCGGCACAGTaGCTTGGTCCACGAATCTTG +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFLHPAQ*LGPRIL
Trigger: CAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAA...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTTGCACCCGGCACAGTaGCTTGGTCCACGAATCTTG +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHLHPAQ*LGPRIL
Trigger: CAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAA...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCACTTCCAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KKSCSSDSNRCPAPSPTSRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...GGAAGTGGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAGTCGGACTCACAGTATaGAACACCATCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREVGLTV*NTILAD
Trigger: ATCAGCAAGGATGGTGTTCCATACTGTGAGTCCGAC...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTCCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCAATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGTGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCCTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFLCTPG*RPVSAG
Trigger: TCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAG...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCCCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGACATCTAACTGGCTATaGTATGGAGAGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGTSNWL*YGELRP
Trigger: TGGCCGGAGCTCTCCATACCATAGCCAGTTAGATGT...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAGGTAGTGCGACCGAGGGGAGCCATTGAGGGACATCTCATAGCCAGCTGTGTGGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: QVVRPRGAIEGHLIASCVEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...CACACAGCTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGTCGCACTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHGLAGV*YGCPAS
Trigger: GCTGGCAGGGCAACCATACCATACCCCCGCCAGTCC...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGGGGTATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGATTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GGMVWLPCQPTDQRHRPRFPCET*PTLQQE
Trigger: CTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAA...TCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCATACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTaGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTA +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPT*QQEPRTGGGMV
Trigger: TACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTGGAGCTCGACATCCATaGTGCGGGCTCGCGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSGARHP*CGLAGW
Trigger: CCAACCCGCGAGCCCGCATCATGGATGTCGAGCTCC...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGCTTGAAGAAGAAGCCTaGCTGGGCCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRLEEEA*LGQATA
Trigger: GGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTTCAAG...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGLVHES*WAYCWP
Trigger: TGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAA...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGAGCTTGTGCATGCTGCGGTCAAAATCATCCTCCTCTCCTCCAGACGAGAACCAGGCAGATTTGGAGATaGGAGGATCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: GACACCGQNHPPLLQTRTRQIWR*EDHCQP
Trigger: TGGCTGACAGTGATCCTCTCATCTCCAAATCTGCCT...GGTTCTCGTCTGGAGGAGAGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMDRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTGCCCTTACAAAGATCCTTCCTaGATTTCCTCAGATGCAATC +
Preference number: 4 (lower is better)
Translates to: GQLCSRSRGLAGVWYGCPYKDPS*ISSDAI
Trigger: GATTGCATCTGAGGAAATTCAGGAAGGATCTTTGTA...AGGGCAACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGCGTAGATGTCGCAGATaGCTCGGTTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRRRCRR*LGWVTQ
Trigger: TTGGGTCACCCAACCGAGTCATCTGCGACATCTACG...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326685.11
ENST00000515171.5
CDS-3UTR GCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGTGGAAGTGGTTGTTGTaGACGCGGACCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRWKWLL*TRTTSP
Trigger: AGGGGAAGTGGTCCGCGTGCACAACAACCACTTCCA...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGTGGAAGTGGTTGTTGTaGACGCGGACCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPWKWLL*TRTTSP
Trigger: AGGGGAAGTGGTCCGCGTGCACAACAACCACTTCCA...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGCTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVAGSPG*RCTPGS
Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAGC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTAGCTGTCACAGCGGGTaGCATAGAGTTGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGSCHSG*HRVAGS
Trigger: ACTACCAGCAACTCTATGGCACCCGCTGTGACAGCT...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATCTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAATTTGGAGCTTGTGCATaGTGCGGTCAAAATCATCCT +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGREFGACA*CGQNHP
Trigger: AGGATGATTTTGACCGCAGCATGCACAAGCTCCAAA...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFHAPVD*VHAVVV
Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETKHGQL*SRSRGL
Trigger: CAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCATCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTATTGGAGCTGCCCCGTaGATTGTAAGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LPLPHSVLSIQQVLNIRGIGAAP*IVRILL
Trigger: CAGCAGAATCCTTACAATCCACGGGGCAGCTCCAAT...ACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCATCTGATGTGGAAGTaGTTGTTGTGCACGCGGACC +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPHLMWK*LLCTRT
Trigger: GGTCCGCGTGCACAACAACCACTTCCACATCAGATG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAAGAAGAAGCCTGACTaGGCCAGGCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPKKKPD*ARPQPH
Trigger: ATGTGGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTT...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGAAGAAGAAGCCTGACTaGGCCAGGCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEKKKPD*ARPQPH
Trigger: ATGTGGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTT...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTAGTGCAGATGTACTCCTaGTTCTTGAAGAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVVQMYS*FLKKKP
Trigger: AGGCTTCTTCTTCAAGAACCAGGAGTACATCTGCAC...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGTTGCACCCGGCACAGTaGCTTGGTCCACGAATCTTG +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPLHPAQ*LGPRIL
Trigger: CAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAA...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCGGTGAACATCTGGTaGCAGCGTACACACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETESVNIW*QRTHLA
Trigger: TGCCAGGTGTGTACGCTGCCACCAGATGTTCACCGA...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAAGCCTGGTAAGAGGTTaGAGTGGAGGACCTCACATC +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETSLVRG*SGGPHI
Trigger: GATGTGAGGTCCTCCACTCCAACCTCTTACCAGGCT...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGCGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRRPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCCTGTCTACATCCTTaGGCAGTCGGTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPSCLHP*AVGFFL
Trigger: GAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGA...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCAAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGGAGGGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCAGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: EEGPKKSCSSDSNRCPAPGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...TGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGCTGCGACTGATTTCATaGATCCTGGTCCTCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRLRLIS*ILVLVW
Trigger: CCAGACGAGGACCAGGATTCATGAAATCAGTCGCAG...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGATGACTCGGTTGGGTaGCCCAATGCTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGDDSVG*PNAGSR
Trigger: CCTGGATCCAGCATTGGGTCACCCAACCGAGTCATC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQVVVVR*AGEGGG
Trigger: TCCCCCACCTTCTCCCGCTCACCTCACCACTACTAC...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGTCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGCCAAGAACCTTTCTTTaGGACACGGCCTATTTTCTC +
Preference number: 4 (lower is better)
Translates to: KFPCETWPTLQQEPRTGGPRTFL*DTAYFL
Trigger: GAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGG...CCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGGAGGGAAGGGAAACATCGCCAGCCTCTTaGGAGTCATTATTGTCATTT +
Preference number: 4 (lower is better)
Translates to: LQVQVRQRGQLEVVEGRETSPAS*ESLLSF
Trigger: AAATGACAATAATGACTCTCAAGAGGCTGGCGATGT...TTCCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATGACCGAGTCCCAGGTTaGCTCACCCCGTGCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHDRVPG*LTPCSP
Trigger: AGGGGAGCACGGGGTGAGTCAACCTGGGACTCGGTC...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCATAAGGCAACTTCCATaGTTGCGTCTGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPIRQLP*LRLAGD
Trigger: ATCCCCAGCCAGACGCAATCATGGAAGTTGCCTTAT...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAGGACCACTTCCCCTTTaGAGGTGTCTCCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGGPLPL*RCLHSG
Trigger: ACCGCTGTGGAGACACCTGCAAAGGGGAAGTGGTCC...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAGGTTGGGTGACCCAATaGTGGATCCAGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGGWVTQ*WIQGVR
Trigger: TCTCACCCCCTGGATCCAGCATTGGGTCACCCAACC...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGGTTGGGTGACCCAATaGTGGATCCAGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGGWVTQ*WIQGVR
Trigger: TCTCACCCCCTGGATCCAGCATTGGGTCACCCAACC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAGGTTGGGTGACCCAATaGTGGATCCAGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRGWVTQ*WIQGVR
Trigger: TCTCACCCCCTGGATCCAGCATTGGGTCACCCAACC...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACCTGGAGGCCCGTCTCTaGCGGAGGTCCAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYLEARL*RRSRFS
Trigger: CGAGAACCTGGACCTCCGGCAGAGACGGGCCTCCAG...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGAGAAGGTGGGGGACATaGCCTGCCGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQRRWGT*PAGCRW
Trigger: CCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCT...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGAGAAGGTGGGGGACATaGCCTGCCGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMRRWGT*PAGCRW
Trigger: CCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCT...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGATTTGGGGAGACTGCTaGAGATCTTCCCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEIWGDC*RSSHGR
Trigger: CCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAAT...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGCTGATTTGGGGAGACTaGTGCAGATCTTCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRLIWGD*CRSSHG
Trigger: CCCATGGGAAGATCTGCAGCAGTCTCCCCAAATCAG...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCTCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGGCAACTTCCATGATTaGGTCTGGCTGGGGATGATT +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVGNFHD*VWLGMI
Trigger: AATCATCCCCAGCCAGACGCAATCATGGAAGTTGCC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTATTGGAGCTGCCCCGTaGATTGTAAGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGIGAAP*IVRILL
Trigger: CAGCAGAATCCTTACAATCCACGGGGCAGCTCCAAT...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCGTGAAGCATCTGATGTaGAAGTGGTTGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPVKHLM*KWLLCT
Trigger: CGTGCACAACAACCACTTCCACATCAGATGCTTCAC...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTCTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATGCTTACTGCTGGCCATaGACTGGGAGCACGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHAYCWP*TGSTFG
Trigger: GCCAAACGTGCTCCCAGTCCATGGCCAGCAGTAAGC...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGACCCGGCACAGTGGCTTaGTCCACGAATCTTGATGGG +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRPGTVA*STNLDG
Trigger: CCCATCAAGATTCGTGGACCAAGCCACTGTGCCGGG...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGATGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACCTGCCGGCTGTAGGTaGGGGAGTCTATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALPAGCR*GSLCTP
Trigger: CGGGGTACATAGACTCCCCCACCTACAGCCGGCAGG...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACATGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTGGCTCGGGGCACTTTaGGGGACCCATGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMWLGAL*GTHGRS
Trigger: GGACCTACCATGGGTCCCCCAAAGTGCCCCGAGCCA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWERPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGGAAGAGGTCTGCGCTaGGTGTCCTGTGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPGRGLR*VSCAAH
Trigger: ATGGGCTGCACAGGACACCCAGCGCAGACCTCTTCC...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGTCCTGTCTACATCCTTaGGCAGTCGGTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGSCLHP*AVGFFL
Trigger: GAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGA...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCTCCTGTCTACATCCTTaGGCAGTCGGTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVSCLHP*AVGFFL
Trigger: GAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGA...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTGGGGCCAGTTGGAAGTaGTGGAGGGAAGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSGASWK*WREGKG
Trigger: GCCCTTCCCTTCCCTCCACCACTTCCAACTGGCCCC...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCGGCCATGAGCGGTGTTaGCCAACACTTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPGHERC*PTLHFG
Trigger: TCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCC...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCTCCAGAAAGCTTTCCTaGGTCTGCTCTAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPSRKLS*VCSSCI
Trigger: TATGCAGCTAGAGCAGACCCAGGAAAGCTTTCTGGA...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCTGTCCCCTCTCTGTCTaGGCTGTAGCCCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHICPLSV*AVAPGL
Trigger: AAGGCCAGGGGCTACAGCCCAGACAGAGAGGGGACA...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCAGCCCAAAGGGGGTGTaGACCACAGGGAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFSPKGV*TTGRQG
Trigger: GCCCTGCCTCCCTGTGGTCCACACCCCCTTTGGGCT...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506113.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGAATCCCGGGCAGAAGTaGGGTTGGCAGCGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMNPGQK*GWQRLL
Trigger: GAGCAGGCGCTGCCAACCCCACTTCTGCCCGGGATT...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTAATCCCGGGCAGAAGTaGGGTTGGCAGCGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESNPGQK*GWQRLL
Trigger: GAGCAGGCGCTGCCAACCCCACTTCTGCCCGGGATT...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGCCACAGCCACATACTTaGCAGGTGAAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRPQPHT*QVKHLM
Trigger: CATCAGATGCTTCACCTGTCAAGTATGTGGCTGTGG...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCTTGAAGAAGAAGCCTaGCTGGGCCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSLEEEA*LGQATA
Trigger: GGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTTCAAG...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: LSALHPLCLGTCLTIPAIVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAGTCCAGAGCCAGGAGTaGCTGGCCGTGCTTGATCTC +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALVQSQE*LAVLDL
Trigger: GAGATCAAGCACGGCCAGTCACTCCTGGCTCTGGAC...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGCCAAGACTCTGCCACTaGTGTATCGGTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRPRLCH*CIGHKS
Trigger: AGACTTGTGACCGATACATCAGTGGCAGAGTCTTGG...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGCCAAGACTCTGCCACTaGTGTATCGGTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPPRLCH*CIGHKS
Trigger: AGACTTGTGACCGATACATCAGTGGCAGAGTCTTGG...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTVVVVR*AGEGGG
Trigger: TCCCCCACCTTCTCCCGCTCACCTCACCACTACTAC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAACCGAGGGGAGCCATTaGGGGACATCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQTEGSH*GTSHSQ
Trigger: CTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGT...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGGCAGATTTGGAGATaGGAGGATCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPRQIWR*EDHCQP
Trigger: TGGCTGACAGTGATCCTCTCATCTCCAAATCTGCCT...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CGTGGGCGCTCAAAGGTGCTCACTGATTTGGGGAGACTGCTGCAGATCTTCCCAATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 4 (lower is better)
Translates to: RGRSKVLTDLGRLLQIFPIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...TGGGAAGATCTGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGAGCAGGAGGCAGGGATaGGCTCTCCATCCCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQSRRQG*ALHPWR
Trigger: TCTCCAGGGATGGAGAGCTCATCCCTGCCTCCTGCT...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGTACGGAGGCCCCGGCTaGTTTTTAAATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRYGGPG*FLNLPF
Trigger: GAACGGAAGATTTAAAAAGCAGCCGGGGCCTCCGTA...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTACGGAGGCCCCGGCTaGTTTTTAAATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEYGGPG*FLNLPF
Trigger: GAACGGAAGATTTAAAAAGCAGCCGGGGCCTCCGTA...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGATGGAAGTGGTTGTTGTaGACGCGGACCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGWKWLL*TRTTSP
Trigger: AGGGGAAGTGGTCCGCGTGCACAACAACCACTTCCA...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGATGGGGAAAGGCTTCCTaGACAAGCTGCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGWGKAS*TSCTRS
Trigger: GCTTCGTGTGCAGCTTGTGCAGGAAGCCTTTCCCCA...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTTGAAGCAGCTGACGTaGCACTGCTTGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFLKQLT*HCLSRA
Trigger: GGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAA...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACAGAAGGTGGGGGACATaGCCTGCCGGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYRRWGT*PAGCRW
Trigger: CCACCTACAGCCGGCAGGGCATGTCCCCCACCTTCT...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGTTTTGCTCTTGGTTaGTGTAGACAAATCACCATG +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVCFALG*CRQITM
Trigger: CATGGTGATTTGTCTACAGCAACCAAGAGCAAAACA...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
CDS-3UTR GCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCCCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATCCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATAGGGGTCCAGGGATCTaGATAGGAGCTCGACCGGGC +
Preference number: 4 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDRGPGI*IGARPG
Trigger: GCCCGGTCGAGCTCCTATGCAGATCCCTGGACCCCT...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGTGGGCGCTCAAAGGTaGTCACTGATTTGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGVGAQR*SLIWGD
Trigger: GTCTCCCCAAATCAGTGAGCACCTTTGAGCGCCCAC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACC +
Preference number: 4 (lower is better)
Translates to: LSALHPLCLGTCLTIPAIGVWYG*PASPQT
Trigger: GGTCTGTGGGCTGGCAGGGCAACCATACCATACCCC...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGGGGTATGGTATGGTTaGCCTGCCAGCCCACAGACC +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESGVWYG*PASPQT
Trigger: GGTCTGTGGGCTGGCAGGGCAACCATACCATACCCC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCCGCTCAACATCAGAGGTaGTCAGTGAGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VHALRYPLLVGISLRPSPAQHQR*SVRVCS
Trigger: TGAACAAACCCTCACTGAGCACCTCTGATGTTGAGC...GGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGGGATCTGCATAGGAGCTCGACCGGGCCTTCATTTCTTCCTTCAGAATCAGCCGCTCAACATCAGAGGTaGTCAGTGAGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RDLHRSSTGPSFLPSESAAQHQR*SVRVCS
Trigger: TGAACAAACCCTCACTGAGCACCTCTGATGTTGAGC...GGCTGATTCTGAAGGAAGAAATGAAGGCCCGGTCGAGCTCCTATGCAGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp TTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATCTCCGATCACTTTCTaGCTTACATCCGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: FPVKHGQLCSRSRGLAGVSPITF*LTSVMF
Trigger: AAACATAACGGATGTAAGGCAGAAAGTGATCGGAGA...TACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTTCCTCTGGTTCTCCAAGTCCAGGTCAGGCAAAGGGGCCAGTTGGAAGTGGTGTGAAGCATCTGATGTaGAAGTGGTTGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: FSSGSPSPGQAKGPVGSGVKHLM*KWLLCT
Trigger: CGTGCACAACAACCACTTCCACATCAGATGCTTCAC...ACCACTTCCAACTGGCCCCTTTGCCTGACCTGGACTTGGAGAACCAGAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGGGATCTGCATAGGAGCTCGACCGGGCCTTCATTTCTTCCTTCAGAATCAGCCGTGAAGCATCTGATGTaGAAGTGGTTGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: RDLHRSSTGPSFLPSESAVKHLM*KWLLCT
Trigger: CGTGCACAACAACCACTTCCACATCAGATGCTTCAC...GGCTGATTCTGAAGGAAGAAATGAAGGCCCGGTCGAGCTCCTATGCAGATCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTGCACACGAAGCACTTaGGGTGGTAAGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFCTRST*GGKCGP
Trigger: TGGGCCGCACTTACCACCCCAAGTGCTTCGTGTGCA...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGGTCGGACTCACAGTATaGAACACCATCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGVGLTV*NTILAD
Trigger: ATCAGCAAGGATGGTGTTCCATACTGTGAGTCCGAC...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGATCGGTGAACATCTGGTaGCAGCGTACACACCTGGCA +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGSVNIW*QRTHLA
Trigger: TGCCAGGTGTGTACGCTGCCACCAGATGTTCACCGA...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGACTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCCTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTCTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGCTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCCTATGTACCCCGGGCTaGAGGCCCGTCTCTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFLCTPG*RPVSAG
Trigger: TCCGGCAGAGACGGGCCTCCAGCCCGGGGTACATAG...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGACATCTAACTGGCTATaGTATGGAGAGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRTSNWL*YGELRP
Trigger: TGGCCGGAGCTCTCCATACCATAGCCAGTTAGATGT...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGACCTCACATCTAACTaGCTATGGTATGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFDLTSN*LWYGEL
Trigger: GAGCTCTCCATACCATAGCCAGTTAGATGTGAGGTC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGGTTACTGTCTCCAGCTaGGATGTGAAAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRVTVSS*DVKVLG
Trigger: CCCAAGCACTTTCACATCCCAGCTGGAGACAGTAAC...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCTGTACTTGGAGGTCTaGCTGATGTCTTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPLYLEV*LMSSLV
Trigger: AACAAGTGAAGACATCAGCCAGACCTCCAAGTACAG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAAATCATCCTCCTCTCCTCCAGACGAGAACCTTCTGGCTCGGGGCACTTTGGGCTGTACTTGGAGGTCTaGCTGATGTCTTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: KIILLSSRREPSGSGHFGLYLEV*LMSSLV
Trigger: AACAAGTGAAGACATCAGCCAGACCTCCAAGTACAG...CCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTGGAGGAGAGGAGGATGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGTCCTGTCTACATCCTTaGGCAGTCGGTTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETESCLHP*AVGFFL
Trigger: GAGGAAGAAACCGACTGCCCAAGGATGTAGACAGGA...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTGTCTGGTTGTTCAGTTaGAGCTCTGGTGGGAACATT +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFVWLFS*SSGGNI
Trigger: AATGTTCCCACCAGAGCTCCAACTGAACAACCAGAC...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACGGACTGGCGGGGGTATaGTATGGTTGCCCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYGLAGV*YGCPAS
Trigger: GCTGGCAGGGCAACCATACCATACCCCCGCCAGTCC...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGCAGGAGCCGAGGACTaGCGGGGGTATGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESAGAED*RGYGMV
Trigger: AACCATACCATACCCCCGCCAGTCCTCGGCTCCTGC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PASPQTRGIDQEPFFETRSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...CCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACAGGTGGCGCTCTAAACGGGTCCTGTCTACATCCTTGGGCAGTCGGTTTCTTCTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TGGALNGSCLHPWAVGFFSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...GAAGAAACCGACTGCCCAAGGATGTAGACAGGACCCGTTTAGAGCGCCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGTCCAGAAAGCTTTCCTaGGTCTGCTCTAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGSRKLS*VCSSCI
Trigger: TATGCAGCTAGAGCAGACCCAGGAAAGCTTTCTGGA...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGTTCCATGATTGCGTCTaGCTGGGGATGATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVFHDCV*LGMILK
Trigger: CTTTAGAATCATCCCCAGCCAGACGCAATCATGGAA...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp CGTTATGTTTGGGTACATGCCTTACGATACCCGCTATaGGTAGGCATATCCCTGAGACCGAGTCCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RYVWVHALRYPL*VGISLRPSPRL
Trigger: CAACCTGGGACTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATAGCGGTAGCACTGGATaGCATTGGAGCTGCCCCGTG +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHSGSTG*HWSCPV
Trigger: CACGGGGCAGCTCCAATGTCATCCAGTGCTACCGCT...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCCTTGAAGAAGAAGCCTaGCTGGGCCAGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFLEEEA*LGQATA
Trigger: GGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTTCAAG...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGCACATTCTTTACCGCTaGAGGTCACCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRHILYR*RSPCLQ
Trigger: TTGGAGACAAGGTGACCTTCAGCGGTAAAGAATGTG...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGAAACCTCGGAACCTGTaGGGTACATTTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEKPRNL*GTFPLL
Trigger: AAGGAGAGGAAATGTACCTCACAGGTTCCGAGGTTT...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYVVVVR*AGEGGG
Trigger: TCCCCCACCTTCTCCCGCTCACCTCACCACTACTAC...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAACCGAGGGGAGCCATTaGGGGACATCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALTEGSH*GTSHSQ
Trigger: CTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGT...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LSALHPLCLGTCLTIPAILACPS*LRSCCR
Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATCTCGCATGCCCCAGTTaGCTGCGTTCATGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYLACPS*LRSCCR
Trigger: ACGACAGCATGAACGCAGTCAACTGGGGCATGCGAG...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGACCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGCCCCAAGAGAGCACTaGGCTCCTAATTGGGGGTGT +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESAPREH*APNWGC
Trigger: ACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGGC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCTTGTAGTCACCAGCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCTCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SCSHQQQFIRVDLVLSHASWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...GGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGCTGGTGACTACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAATAAGGCAACTTCCATaGTTGCGTCTGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEIRQLP*LRLAGD
Trigger: ATCCCCAGCCAGACGCAATCATGGAAGTTGCCTTAT...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTGGTTTAGGGTTGAAATaGTGTGCTTTTATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGGLGLK*CAFMGN
Trigger: GTTTCCCATAAAAGCACATCATTTCAACCCTAAACC...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCACTAATAGGCGCAGGTaGGAGCAAGGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHITNRRR*EQGEGG
Trigger: GCCTCCTTCTCCTTGCTCTCACCTGCGCCTATTAGT...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAGGACCACTTCCCCTTTaGAGGTGTCTCCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALGPLPL*RCLHSG
Trigger: ACCGCTGTGGAGACACCTGCAAAGGGGAAGTGGTCC...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCTGGAAGTGGTTGTTGTaGACGCGGACCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPWKWLL*TRTTSP
Trigger: AGGGGAAGTGGTCCGCGTGCACAACAACCACTTCCA...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTGGAAGTGGTTGTTGTaGACGCGGACCACTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFWKWLL*TRTTSP
Trigger: AGGGGAAGTGGTCCGCGTGCACAACAACCACTTCCA...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCGCTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFAGSPG*RCTPGS
Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAGC...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCTTGAAGCAGCTGACGTaGCACTGCTTGTCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHILKQLT*HCLSRA
Trigger: GGCTCTGGACAAGCAGTGGCACGTCAGCTGCTTCAA...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGTAGTGCTTCCCTCCTaGCTCCAAGACTCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQVVLPS*LQDSAT
Trigger: AGTGGCAGAGTCTTGGAGGCAGGAGGGAAGCACTAC...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGGTTGGGTGACCCAATaGTGGATCCAGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYGWVTQ*WIQGVR
Trigger: TCTCACCCCCTGGATCCAGCATTGGGTCACCCAACC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGACATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRHAPVD*VHAVVV
Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGGTGAAGCATCTGATGTaGAAGTGGTTGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEVKHLM*KWLLCT
Trigger: CGTGCACAACAACCACTTCCACATCAGATGCTTCAC...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCAAGAAGAAGCCTGACTaGGCCAGGCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIKKKPD*ARPQPH
Trigger: ATGTGGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTT...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGACTGGGAGCACGTTTaGCACACACATTCTTTACCG +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEDWEHV*HTHSLP
Trigger: CGGTAAAGAATGTGTGTGCCAAACGTGCTCCCAGTC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTAGAGCCAGGAGTGACTaGCCGTGCTTGATCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSALHPLCLGTCLTIPAIRARSD*PCLISS
Trigger: GGAGGAGATCAAGCACGGCCAGTCACTCCTGGCTCT...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGTCGGACTCACAGTATaGAACACCATCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPVGLTV*NTILAD
Trigger: ATCAGCAAGGATGGTGTTCCATACTGTGAGTCCGAC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGGCAGCGTACACACCTaGCACAGGTTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTGSVHT*HRLGGS
Trigger: ACTACCACCCAACCTGTGCCAGGTGTGTACGCTGCC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCCCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAACCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTGTACTTGGAGGTCTaGCTGATGTCTTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFLYLEV*LMSSLV
Trigger: AACAAGTGAAGACATCAGCCAGACCTCCAAGTACAG...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGGTCTGGCGAGTAGATaGGACTGTACTTGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGGLASR*DCTWRS
Trigger: AGACCTCCAAGTACAGTCCCATCTACTCGCCAGACC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCCAGACGAGAACCTTCTaGCTCGGGGCACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFQTRTF*LGALWG
Trigger: CCCCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTG...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTCTTCCTGGGACAGGTaGCGCTCTAAACGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMSSWDR*RSKRVL
Trigger: CAGGACCCGTTTAGAGCGCCACCTGTCCCAGGAAGA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCCCAAGAGAGCACTGAGCTCCTAATTGGGGGTGTTGAGAAAGTTCTTCGTGGGTTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: PQESTELLIGGVEKVLRGFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...CCCACGAAGAACTTTCTCAACACCCCCAATTAGGAGCTCAGTGCTCTCTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGGAGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAAGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: WRMMRVVCLVVQLELWWEGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...TTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACGGCAAAGGGGCCAGTTaGAAGTGGTGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHGKGAS*KWWREG
Trigger: CCCTTCCCTCCACCACTTCCAACTGGCCCCTTTGCC...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACAGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AAACATGGCCAACTTTGCAGCAGGAGCCGAGGACTGGCGGGGGTATGGTATGGTTACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 4 (lower is better)
Translates to: KHGQLCSRSRGLAGVWYGYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...ACCATACCATACCCCCGCCAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCAGGAATCCTAGATTTGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGGAGGTCCAGAAAGCTTTCCTaGGTCTGCTCTAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: PGILDLDKGEVTIQGRRRSRKLS*VCSSCI
Trigger: TATGCAGCTAGAGCAGACCCAGGAAAGCTTTCTGGA...CCTCCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp GCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTTaGGAGAGGAGAAGAGAGGTTAAGCTTTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: APTKHYPFKVKG*ERRREVKLSPL
Trigger: CAGGGGAGAAAGCTTAACCTCTCTTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCTTGGTCCACGAATCTTaGTGGGCTTACTGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHILVHES*WAYCWP
Trigger: TGGCCAGCAGTAAGCCCATCAAGATTCGTGGACCAA...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACGATGACTCGGTTGGGTaGCCCAATGCTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHDDSVG*PNAGSR
Trigger: CCTGGATCCAGCATTGGGTCACCCAACCGAGTCATC...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATACCGAGGGGAGCCATTaGGGGACATCTCATAGCCAG +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDTEGSH*GTSHSQ
Trigger: CTGGCTATGAGATGTCCCTCAATGGCTCCCCTCGGT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATAGGCAGATTTGGAGATaGGAGGATCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHRQIWR*EDHCQP
Trigger: TGGCTGACAGTGATCCTCTCATCTCCAAATCTGCCT...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCCTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAATCATGGGCTTCTCCTTaGAAGAGGGAAGGGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQSWASP*KREGSG
Trigger: TCCTGACCCTTCCCTCTTTCAAGGAGAAGCCCATGA...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGCCAAGAACCTTTCTTTaGGACACGGCCTATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRPRTFL*DTAYFL
Trigger: GAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGG...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACGTAGATGTCGCAGATaGCTCGGTTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTRRCRR*LGWVTQ
Trigger: TTGGGTCACCCAACCGAGTCATCTGCGACATCTACG...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326685.11
ENST00000504238.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATGGACCACTTCCCCTTTaGAGGTGTCTCCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHGPLPL*RCLHSG
Trigger: ACCGCTGTGGAGACACCTGCAAAGGGGAAGTGGTCC...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACGGACCACTTCCCCTTTaGAGGTGTCTCCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHGPLPL*RCLHSG
Trigger: ACCGCTGTGGAGACACCTGCAAAGGGGAAGTGGTCC...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCAGCTGTCACAGCGGGTaGCATAGAGTTGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHISCHSG*HRVAGS
Trigger: ACTACCAGCAACTCTATGGCACCCGCTGTGACAGCT...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGCTTCCTGCACAAGCTaGACACGAAGCACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTASCTS*TRSTWG
Trigger: ACCCCAAGTGCTTCGTGTGCAGCTTGTGCAGGAAGC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGCTTCCTGCACAAGCTaGACACGAAGCACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMASCTS*TRSTWG
Trigger: ACCCCAAGTGCTTCGTGTGCAGCTTGTGCAGGAAGC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGTGGGGAAAGGCTTCCTaGACAAGCTGCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQWGKAS*TSCTRS
Trigger: GCTTCGTGTGCAGCTTGTGCAGGAAGCCTTTCCCCA...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTATGGGGAAAGGCTTCCTaGACAAGCTGCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALWGKAS*TSCTRS
Trigger: GCTTCGTGTGCAGCTTGTGCAGGAAGCCTTTCCCCA...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGCAGCTGACGTGCCACTaGTTGTCCAGAGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLQLTCH*LSRARS
Trigger: ACTCCTGGCTCTGGACAAGCAGTGGCACGTCAGCTG...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCCATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFHAPVD*VHAVVV
Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCGATGACGTGGGCTTaGCTGACAGTACAGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFSMTWA*LTVQKS
Trigger: GCTTTTCTGTACTGTCAGGCAAGCCCACGTCATCGA...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGCTCACCCTTTTAACTaGATTGCCCCAAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGAHPFN*IAPREH
Trigger: GTGCTCTCTTGGGGCAATGCAGTTAAAAGGGTGAGC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAGCTCACCCTTTTAACTaGATTGCCCCAAGAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRAHPFN*IAPREH
Trigger: GTGCTCTCTTGGGGCAATGCAGTTAAAAGGGTGAGC...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCCCCTCCCCCATTCAGTGCTCAGTATTCAGCAGGTGCTCAACATCAGAGGTGCTAAAGAATACAAGCTaGAATCATGGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SPSPIQCSVFSRCSTSEVLKNTS*NHGLLL
Trigger: AAGGAGAAGCCCATGATTGCAGCTTGTATTCTTTAG...CACCTCTGATGTTGAGCACCTGCTGAATACTGAGCACTGAATGGGGGAGGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GGTCCCAAGAAATCCTGCAGCTCTGATTCTAACAGGTGCCCTGCTCCATCTCCCCTAAAGAATACAAGCTaGAATCATGGGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GPKKSCSSDSNRCPAPSPLKNTS*NHGLLL
Trigger: AAGGAGAAGCCCATGATTGCAGCTTGTATTCTTTAG...GGGAGATGGAGCAGGGCACCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFKHGQL*SRSRGL
Trigger: CAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AAAATCATCCTCCTCTCCTCCAGACGAGAACCTTCTGGCTCGGGGCACTTTGGGTCTCCGATCACTTTCTaGCTTACATCCGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: KIILLSSRREPSGSGHFGSPITF*LTSVMF
Trigger: AAACATAACGGATGTAAGGCAGAAAGTGATCGGAGA...CCCAAAGTGCCCCGAGCCAGAAGGTTCTCGTCTGGAGGAGAGGAGGATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGGCAACTTCCATGATTaGGTCTGGCTGGGGATGATT +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGGNFHD*VWLGMI
Trigger: AATCATCCCCAGCCAGACGCAATCATGGAAGTTGCC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAAAGGCAGTCCAGTaGCAGCTCTGTATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQEKAVQ*QLCILR
Trigger: CCTGAGGATACAGAGCTGGCACTGGACTGCCTTTTC...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCATGTCCTGCACAAGCTaGACACGAAGCACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFMSCTS*TRSTWG
Trigger: ACCCCAAGTGCTTCGTGTGCAGCTTGTGCAGGACAT...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGTGATGTCTTTGCACTaGGTCTTTCATTCAATACGG +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVVMSLH*VFHSIR
Trigger: CCGTATTGAATGAAAGACCCAGTGCAAAGACATCAC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAATTGGAGCTGCCCCGTaGATTGTAAGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGIGAAP*IVRILL
Trigger: CAGCAGAATCCTTACAATCCACGGGGCAGCTCCAAT...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAAAGAAGAAGCCTGACTaGGCCAGGCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTKKKPD*ARPQPH
Trigger: ATGTGGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTT...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACTGCACACGAAGCACTTaGGGTGGTAAGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHCTRST*GGKCGP
Trigger: TGGGCCGCACTTACCACCCCAAGTGCTTCGTGTGCA...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATTGCACACGAAGCACTTaGGGTGGTAAGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDCTRST*GGKCGP
Trigger: TGGGCCGCACTTACCACCCCAAGTGCTTCGTGTGCA...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATTGCACACGAAGCACTTaGGGTGGTAAGTGCGGCCCA +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDCTRST*GGKCGP
Trigger: TGGGCCGCACTTACCACCCCAAGTGCTTCGTGTGCA...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCGCTTACTGCTGGCCATaGACTGGGAGCACGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFAYCWP*TGSTFG
Trigger: GCCAAACGTGCTCCCAGTCCATGGCCAGCAGTAAGC...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACGCTTACTGCTGGCCATaGACTGGGAGCACGTTTGGC +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYAYCWP*TGSTFG
Trigger: GCCAAACGTGCTCCCAGTCCATGGCCAGCAGTAAGC...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACATTGCACCCGGCACAGTaGCTTGGTCCACGAATCTTG +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTLHPAQ*LGPRIL
Trigger: CAAGATTCGTGGACCAAGCCACTGTGCCGGGTGCAA...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACACCTGGCACAGGTTaGGTGGTAGTGCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFTPGTG*VVVLPS
Trigger: GGAGGGAAGCACTACCACCCAACCTGTGCCAGGTGT...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACGGCAGCGTACACACCTaGCACAGGTTGGGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHGSVHT*HRLGGS
Trigger: ACTACCACCCAACCTGTGCCAGGTGTGTACGCTGCC...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTATCGGTGAACATCTGGTaGCAGCGTACACACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALSVNIW*QRTHLA
Trigger: TGCCAGGTGTGTACGCTGCCACCAGATGTTCACCGA...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTCGGTGAACATCTaGTGGCAGCGTACACACCTG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMPSVNI*WQRTHL
Trigger: CAGGTGTGTACGCTGCCACCAGATGTTCACCGAAGG...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGCTGCCTGTTTGCAGATaGGGTGCCAAACCTCGGAAC +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQLPVCR*GAKPRN
Trigger: GTTCCGAGGTTTGGCACCCCATCTGCAAACAGGCAG...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGGATGTGAAAGTGCTTaGGAGCCTGGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRGCESA*EPGKRL
Trigger: CAACCTCTTACCAGGCTCCCAAGCACTTTCACATCC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCGTTACTGTCTCCAGCTaGGATGTGAAAGTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFVTVSS*DVKVLG
Trigger: CCCAAGCACTTTCACATCCCAGCTGGAGACAGTAAC...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGCGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQRPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGGCCATGAGCGGTGTTaGCCAACACTTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGGHERC*PTLHFG
Trigger: TCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATACCTCACTCATCACCTaGGGGGTGAAAAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYTSLIT*GVKRQS
Trigger: GGACTGCCTTTTCACCCCCCAGGTGATGAGTGAGGT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTCCTGCTCCTCAGATTaGAATCCCGGGCAGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMSCSSD*NPGQKW
Trigger: CCACTTCTGCCCGGGATTCCAATCTGAGGAGCAGGA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp AAGGGCCTTTTCCTTTTCCTACCAGGAATCCTAGATTaGGACAAGGGAGAGGTTACAATCCAGGGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: KGLFLFLPGILD*DKGEVTIQGRR
Trigger: CCTTCTGCCCTGGATTGTAACCTCTCCCTTGTCCAAATCTAGGATTCCTGGTAGGAAAAGGAAAAGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAACCACAGCCACATACTTaGCAGGTGAAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQPQPHT*QVKHLM
Trigger: CATCAGATGCTTCACCTGTCAAGTATGTGGCTGTGG...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGACACATTCTTTACCGCTaGAGGTCACCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRHILYR*RSPCLQ
Trigger: TTGGAGACAAGGTGACCTTCAGCGGTAAAGAATGTG...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAAAACCTCGGAACCTGTaGGGTACATTTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGKPRNL*GTFPLL
Trigger: AAGGAGAGGAAATGTACCTCACAGGTTCCGAGGTTT...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTAAACCTCGGAACCTGTaGGGTACATTTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGKPRNL*GTFPLL
Trigger: AAGGAGAGGAAATGTACCTCACAGGTTCCGAGGTTT...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACGATGACTCGGTTGGGTaGCCCAATGCTGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHDDSVG*PNAGSR
Trigger: CCTGGATCCAGCATTGGGTCACCCAACCGAGTCATC...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCGAGGCTCATAGGAAATaGGGTCGGGGCGTTGTACCT +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFEAHRK*GRGVVP
Trigger: AGGTACAACGCCCCGACCTCATTTCCTATGAGCCTC...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR TCA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATGTAGTAGTGGTGAGGTaGGCGGGAGAAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHVVVVR*AGEGGG
Trigger: TCCCCCACCTTCTCCCGCTCACCTCACCACTACTAC...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRTWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACAATCCAGGATGGCCATaGGCGGTGTTGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHNPGWP*AVLANT
Trigger: AGTGTTGGCCAACACCGCTCATGGCCATCCTGGATT...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCTTCAGGCACCTTCTTTAGGATTACCCATTCAAGGTaGAAGGTTTGGAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ERGHEAERRETSSGTFFRITHSR*KVWRGE
Trigger: TTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAAT...CCTAAAGAAGGTGCCTGAAGAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGAGATTACCCATTCAAGGTaGAAGGTTTGGAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGTCLTIPAIGRHIPETEITHSR*KVWRGE
Trigger: TTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAAT...CTCGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCACTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGATTACCCATTCAAGGTaGAAGGTTTGGAGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PLFQKFPCETWPTLQQEPITHSR*KVWRGE
Trigger: TTCTCCTCTCCAAACCTTTCACCTTGAATGGGTAAT...CGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCATAAGGCAACTTCCATaGTTGCGTCTGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIIRQLP*LRLAGD
Trigger: ATCCCCAGCCAGACGCAATCATGGAAGTTGCCTTAT...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCGGTTTAGGGTTGAAATaGTGTGCTTTTATGGGAAAC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVGLGLK*CAFMGN
Trigger: GTTTCCCATAAAAGCACATCATTTCAACCCTAAACC...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR TCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACACTAATAGGCGCAGGTaGGAGCAAGGAGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHTNRRR*EQGEGG
Trigger: GCCTCCTTCTCCTTGCTCTCACCTGCGCCTATTAGT...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCTACGGAGGCCCCGGCTaGTTTTTAAATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPYGGPG*FLNLPF
Trigger: GAACGGAAGATTTAAAAAGCAGCCGGGGCCTCCGTA...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGCTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESAGSPG*RCTPGS
Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAGC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGCTGGTAGTCCTGGGTaGAGATGTACTCCTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYAGSPG*RCTPGS
Trigger: AGAACCAGGAGTACATCTGCACCCAGGACTACCAGC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTAGCTGTCACAGCGGGTaGCATAGAGTTGCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSSCHSG*HRVAGS
Trigger: ACTACCAGCAACTCTATGGCACCCGCTGTGACAGCT...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCTGGGGAAAGGCTTCCTaGACAAGCTGCACACGAAGC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFWGKAS*TSCTRS
Trigger: GCTTCGTGTGCAGCTTGTGCAGGAAGCCTTTCCCCA...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCGGTTGGGTGACCCAATaGTGGATCCAGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFGWVTQ*WIQGVR
Trigger: TCTCACCCCCTGGATCCAGCATTGGGTCACCCAACC...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACATGCCCCAGTTGACTaGGTTCATGCTGTCGTAGTG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALHAPVD*VHAVVV
Trigger: CACTACGACAGCATGAACGCAGTCAACTGGGGCATG...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAAAACATGGCCAACTTTaGAGCAGGAGCCGAGGACTG +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALKHGQL*SRSRGL
Trigger: CAGTCCTCGGCTCCTGCTGCAAAGTTGGCCATGTTT...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATGCTCAACATCAGAGGTaGTCAGTGAGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHAQHQR*SVRVCS
Trigger: TGAACAAACCCTCACTGAGCACCTCTGATGTTGAGC...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGCTCAACATCAGAGGTaGTCAGTGAGGGTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRAQHQR*SVRVCS
Trigger: TGAACAAACCCTCACTGAGCACCTCTGATGTTGAGC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCTCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGCCCTCCCCCATTCAGTaGTCAGTATTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLPSPIQ*SVFSRC
Trigger: GCACCTGCTGAATACTGAGCACTGAATGGGGGAGGG...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCCCCTCCCCCATTCAGTaGTCAGTATTCAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFPSPIQ*SVFSRC
Trigger: GCACCTGCTGAATACTGAGCACTGAATGGGGGAGGG...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATGGTATGGTTGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTTCTCCGATCACTTTCTaGCTTACATCCGTTATGTTT +
Preference number: 4 (lower is better)
Translates to: MVWLPCQPTDQRHRPRTFSPITF*LTSVMF
Trigger: AAACATAACGGATGTAAGGCAGAAAGTGATCGGAGA...AAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCAACCATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TGCCCTGCCAGCCCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACTGAATTTCCTCAGATaGAATCTCTTCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: CPASPQTRGIDQEPFFETLNFLR*NLFQKA
Trigger: AGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAG...TGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGGGCTGGCAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGGCAACTTCCATGATTaGGTCTGGCTGGGGATGATT +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPGNFHD*VWLGMI
Trigger: AATCATCCCCAGCCAGACGCAATCATGGAAGTTGCC...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCGGCAACTTCCATGATTaGGTCTGGCTGGGGATGATT +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFGNFHD*VWLGMI
Trigger: AATCATCCCCAGCCAGACGCAATCATGGAAGTTGCC...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGAAAAGGCAGTCCAGTaGCAGCTCTGTATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMEKAVQ*QLCILR
Trigger: CCTGAGGATACAGAGCTGGCACTGGACTGCCTTTTC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCCCTGAGACCGGTGATGTCTTTGCACTaGGTCTTTCATTCAATACGG +
Preference number: 4 (lower is better)
Translates to: VWVHALRYPLLVGISLRPVMSLH*VFHSIR
Trigger: CCGTATTGAATGAAAGACCCAGTGCAAAGACATCAC...CGGTCTCAGGGATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAGTGAAGCATCTGATGTaGAAGTGGTTGTTGTGCACG +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGVKHLM*KWLLCT
Trigger: CGTGCACAACAACCACTTCCACATCAGATGCTTCAC...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCGACTGGGAGCACGTTTaGCACACACATTCTTTACCG +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIDWEHV*HTHSLP
Trigger: CGGTAAAGAATGTGTGTGCCAAACGTGCTCCCAGTC...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCGACTGGGAGCACGTTTaGCACACACATTCTTTACCG +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFDWEHV*HTHSLP
Trigger: CGGTAAAGAATGTGTGTGCCAAACGTGCTCCCAGTC...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACCTGCTGGCCATGGACTaGGAGCACGTTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHLLAMD*EHVWHT
Trigger: TGTGTGCCAAACGTGCTCCCAGTCCATGGCCAGCAG...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATATCCAGGGGGTGAGATaGAGGTTTCAGATGTCCGTC +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYIQGVR*RFQMSV
Trigger: GACGGACATCTGAAACCTCCATCTCACCCCCTGGAT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTGGGTGACCCAATGCTaGATCCAGGGGGTGAGATGG +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFWVTQC*IQGVRW
Trigger: CCATCTCACCCCCTGGATCCAGCATTGGGTCACCCA...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCGGATGTGAAAGTGCTTaGGAGCCTGGTAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIGCESA*EPGKRL
Trigger: CAACCTCTTACCAGGCTCCCAAGCACTTTCACATCC...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATCGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDRPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATCGGCCAATTCCACTTTaGAGCTTGTGCATGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHRPIPL*SLCMLR
Trigger: CCGCAGCATGCACAAGCTCCAAAGTGGAATTGGCCG...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGAAGAGAGTTGGACCTTaGGGCACTCAAGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRKRVGP*GTQVRT
Trigger: TGTCCTAACTTGAGTGCCCCAAGGTCCAACTCTCTT...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGGTCTGGTTGTTCAGTTaGAGCTCTGGTGGGAACATT +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRVWLFS*SSGGNI
Trigger: AATGTTCCCACCAGAGCTCCAACTGAACAACCAGAC...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATGCAGGAGCCGAGGACTaGCGGGGGTATGGTATGGTT +
Preference number: 4 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHAGAED*RGYGMV
Trigger: AACCATACCATACCCCCGCCAGTCCTCGGCTCCTGC...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GAAGCCACTGGGAAAATCCAGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 4 (lower is better)
Translates to: EATGKIQDGHERCWPTLHYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...ATGAAGTGTTGGCCAACACCGCTCATGGCCATCCTGGATTTTCCCAGTGGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACGTGGGCTTGCCTGACAGTACAGAAAAGCAAGTCTCATGGCAGGCAGTGTGTCTACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 4 (lower is better)
Translates to: TWACLTVQKSKSHGRQCVYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...GACACACTGCCTGCCATGAGACTTGCTTTTCTGTACTGTCAGGCAAGCCCACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCTCACCTTGTCTCCAATaGGGAAAGGCTTCACTTGCT +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGSPCLQ*GKASLA
Trigger: AGCAAGTGAAGCCTTTCCCCATTGGAGACAAGGTGA...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATCCAAGACTCTGCCACTaGTGTATCGGTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYPRLCH*CIGHKS
Trigger: AGACTTGTGACCGATACATCAGTGGCAGAGTCTTGG...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCCAAGACTCTGCCACTaGTGTATCGGTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSPRLCH*CIGHKS
Trigger: AGACTTGTGACCGATACATCAGTGGCAGAGTCTTGG...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACGCTGGATCCAGGGGGTaGGATGGAGGTTTCAGATGT +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHAGSRG*DGGFRC
Trigger: ACATCTGAAACCTCCATCTCACCCCCTGGATCCAGC...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPTWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATAGGCAGATTTGGAGATaGGAGGATCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYRQIWR*EDHCQP
Trigger: TGGCTGACAGTGATCCTCTCATCTCCAAATCTGCCT...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGATTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: HPSSMISKWSDSRLLQEGFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...TCCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCCGTAGATGTCGCAGATaGCTCGGTTGGGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFRRCRR*LGWVTQ
Trigger: TTGGGTCACCCAACCGAGTCATCTGCGACATCTACG...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326685.11
ENST00000504238.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTATACGGAGGCCCCGGCTaGTTTTTAAATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALYGGPG*FLNLPF
Trigger: GAACGGAAGATTTAAAAAGCAGCCGGGGCCTCCGTA...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACGCTTCCTGCACAAGCTaGACACGAAGCACTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHASCTS*TRSTWG
Trigger: ACCCCAAGTGCTTCGTGTGCAGCTTGTGCAGGAAGC...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
CDS-3UTR GCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGGAGCTTGTGCATGCTaGGGTCAAAATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMGACAC*GQNHPP
Trigger: AGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGGAGCTTGTGCATGCTaGGGTCAAAATCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTGACAC*GQNHPP
Trigger: AGGAGGATGATTTTGACCGCAGCATGCACAAGCTCC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAACCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGATTTGGGGAGACTGCTaGAGATCTTCCCATGGGAGG +
Preference number: 4 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLIWGDC*RSSHGR
Trigger: CCTCCCATGGGAAGATCTGCAGCAGTCTCCCCAAAT...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTCTTCCAAAAGTTTCCCTGTGAAACATGGCCAACTTTGCAGCAGGAGCCGAGGCTGAATTTCCTCAGATaGAATCTCTTCCAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LFQKFPCETWPTLQQEPRLNFLR*NLFQKA
Trigger: AGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAG...CCTCGGCTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAACTTTTGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAGGCAACTTCCATGATTaGGTCTGGCTGGGGATGATT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTGNFHD*VWLGMI
Trigger: AATCATCCCCAGCCAGACGCAATCATGGAAGTTGCC...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATGAAAAGGCAGTCCAGTaGCAGCTCTGTATCCTCAGG +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHEKAVQ*QLCILR
Trigger: CCTGAGGATACAGAGCTGGCACTGGACTGCCTTTTC...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCAAGAAGAAGCCTGACTaGGCCAGGCCACAGCCACAT +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFKKKPD*ARPQPH
Trigger: ATGTGGCTGTGGCCTGGCCCAGTCAGGCTTCTTCTT...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCACAGACCAGAGGCATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCGTGCAGATGTACTCCTaGTTCTTGAAGAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PQTRGIDQEPFFETRPIFVQMYS*FLKKKP
Trigger: AGGCTTCTTCTTCAAGAACCAGGAGTACATCTGCAC...GAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTATGCCTCTGGTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGGACTGGGAGCACGTTTaGCACACACATTCTTTACCG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMDWEHV*HTHSLP
Trigger: CGGTAAAGAATGTGTGTGCCAAACGTGCTCCCAGTC...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCATATCGACCTCACATCTAACTaGCTATGGTATGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: HPLCLGTCLTIPAIGRHIDLTSN*LWYGEL
Trigger: GAGCTCTCCATACCATAGCCAGTTAGATGTGAGGTC...GATATGCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000506113.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGAAAAGCAAGTCTCATaGCAGGCAGTGTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPEKQVS*QAVCPI
Trigger: AATGGGACACACTGCCTGCCATGAGACTTGCTTTTC...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGGGGCCAATAAGGTGTaGAAACCACATGGTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESGANKV*KPHGQH
Trigger: ATGCTGACCATGTGGTTTCCACACCTTATTGGCCCC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTGGCCATGAGCGGTGTTaGCCAACACTTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESGHERC*PTLHFG
Trigger: TCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCC...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATTCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTTTCCATGATTGCGTCTaGCTGGGGATGATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGFHDCV*LGMILK
Trigger: CTTTAGAATCATCCCCAGCCAGACGCAATCATGGAA...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCACCTCACTCATCACCTaGGGGGTGAAAAGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFTSLIT*GVKRQS
Trigger: GGACTGCCTTTTCACCCCCCAGGTGATGAGTGAGGT...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp CTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTaGGGTACATGCCTTACGATACCCGCTATTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LLRSLSALHPLC*GTCLTIPAIGR
Trigger: CCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACCCACAGCCACATACTTaGCAGGTGAAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYPQPHT*QVKHLM
Trigger: CATCAGATGCTTCACCTGTCAAGTATGTGGCTGTGG...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACCCACAGCCACATACTTaGCAGGTGAAGCATCTGATG +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHPQPHT*QVKHLM
Trigger: CATCAGATGCTTCACCTGTCAAGTATGTGGCTGTGG...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCACATTCTTTACCGCTaGAGGTCACCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSHILYR*RSPCLQ
Trigger: TTGGAGACAAGGTGACCTTCAGCGGTAAAGAATGTG...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACACATTCTTTACCGCTaGAGGTCACCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTHILYR*RSPCLQ
Trigger: TTGGAGACAAGGTGACCTTCAGCGGTAAAGAATGTG...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACCCAAGACTCTGCCACTaGTGTATCGGTCACAAGTCT +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHPRLCH*CIGHKS
Trigger: AGACTTGTGACCGATACATCAGTGGCAGAGTCTTGG...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESTWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GAGTTGGACCTTGGGGCACTCAAGTTAGGACAGATGTTTCAGTATAAAAAGGATAGGCAGATTTGGAGATaGGAGGATCACTGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ELDLGALKLGQMFQYKKDRQIWR*EDHCQP
Trigger: TGGCTGACAGTGATCCTCTCATCTCCAAATCTGCCT...ATCCTTTTTATACTGAAACATCTGTCCTAACTTGAGTGCCCCAAGGTCCAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCCTCAAAGGTGCTCACTaGTTTGGGGAGACTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFLKGAH*FGETAA
Trigger: TGCAGCAGTCTCCCCAAATCAGTGAGCACCTTTGAG...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACCCTAATTGGGGGTGTTaGGAAAGTTCTTCGTGGGCG +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHPNWGC*ESSSWA
Trigger: CGCCCACGAAGAACTTTCTCAACACCCCCAATTAGG...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACAGCCCTGCGGTGTGTTaGGTTGTCAGGCACATAGAT +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHSPAVC*VVRHID
Trigger: ATCTATGTGCCTGACAACTCAACACACCGCAGGGCT...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAACCAAGAACCTTTCTTTaGGACACGGCCTATTTTCTC +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQPRTFL*DTAYFL
Trigger: GAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGG...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGCAAGTCTCATGGCAGGCAGTGTGTCCCATTACACAAGAGAGGATTATACCGAACATCGCCAGCCTCTTaGGAGTCATTATTGTCATTT +
Preference number: 4 (lower is better)
Translates to: SKSHGRQCVPLHKRGLYRTSPAS*ESLLSF
Trigger: AAATGACAATAATGACTCTCAAGAGGCTGGCGATGT...TCGGTATAATCCTCTCTTGTGTAATGGGACACACTGCCTGCCATGAGACTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGGATGATGAGAGTTGTCTGTCTGGTTGTTCAGTTGGAGCTCTGGTGGGAACATACATCGCCAGCCTCTTaGGAGTCATTATTGTCATTT +
Preference number: 4 (lower is better)
Translates to: RMMRVVCLVVQLELWWEHTSPAS*ESLLSF
Trigger: AAATGACAATAATGACTCTCAAGAGGCTGGCGATGT...ATGTTCCCACCAGAGCTCCAACTGAACAACCAGACAGACAACTCTCATCATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTATCAGAGGTGCTCAGTaGGGGTTTGTTCAATTTAAG +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGIRGAQ*GFVQFK
Trigger: CTTAAATTGAACAAACCCTCACTGAGCACCTCTGAT...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCATAAGGCAACTTCCATaGTTGCGTCTGGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFIRQLP*LRLAGD
Trigger: ATCCCCAGCCAGACGCAATCATGGAAGTTGCCTTAT...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTACGGAGGCCCCGGCTaGTTTTTAAATCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHYGGPG*FLNLPF
Trigger: GAACGGAAGATTTAAAAAGCAGCCGGGGCCTCCGTA...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCTTTGGAGCTTGTGCATaGTGCGGTCAAAATCATCCT +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPFGACA*CGQNHP
Trigger: AGGATGATTTTGACCGCAGCATGCACAAGCTCCAAA...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAATTTGGAGCTTGTGCATaGTGCGGTCAAAATCATCCT +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQFGACA*CGQNHP
Trigger: AGGATGATTTTGACCGCAGCATGCACAAGCTCCAAA...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp GAAAGTAAGGAGCATAAAAATATCTCGATGACGTGGGCTTGCCTGACAGTACAGAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: ESKEHKNISMTWACLTVQSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATTTTTATGCTCCTTACTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTAAGTCAGTTCTACATTTaGCATGTCACATCGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SFSDHFLPYIRYVWVHALSQFYI*HVTSPA
Trigger: GGCTGGCGATGTGACATGGCAAATGTAGAACTGACT...TAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACATCAGTATTCAGCAGGTaGTCAACATCAGAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTSVFSR*STSEVL
Trigger: GAGCACCTCTGATGTTGAGCACCTGCTGAATACTGA...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCGTGATGTCTTTGCACTaGGTCTTTCATTCAATACGG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGVMSLH*VFHSIR
Trigger: CCGTATTGAATGAAAGACCCAGTGCAAAGACATCAC...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATATTGGAGCTGCCCCGTaGATTGTAAGGATTCTGCTG +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDIGAAP*IVRILL
Trigger: CAGCAGAATCCTTACAATCCACGGGGCAGCTCCAAT...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACCATCTGATGTGGAAGTaGTTGTTGTGCACGCGGACC +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHHLMWK*LLCTRT
Trigger: GGTCCGCGTGCACAACAACCACTTCCACATCAGATG...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATATGACGCTGCAGGTCTaGCACTTGAAGCAGCTGACG +
Preference number: 4 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHMTLQV*HLKQLT
Trigger: CGTCAGCTGCTTCAAGTGCCAGACCTGCAGCGTCAT...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACAAATATCTCGATGACGTaGGCTTGCCTGACAGTACAG +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTNISMT*ACLTVQ
Trigger: CTGTACTGTCAGGCAAGCCCACGTCATCGAGATATT...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TTTCTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACGGTGTGGAAACCACATaGTCAGCATCAGCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: FLIPSPITFCLTSVMFGYGVETT*SASALE
Trigger: TTCTAGGGCTGATGCTGACCATGTGGTTTCCACACC...GTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATGTCTGGTTGTTCAGTTaGAGCTCTGGTGGGAACATT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYVWLFS*SSGGNI
Trigger: AATGTTCCCACCAGAGCTCCAACTGAACAACCAGAC...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGTCTGGTTGTTCAGTTaGAGCTCTGGTGGGAACATT +
Preference number: 4 (lower is better)
Translates to: LSALHPLCLGTCLTIPAIVWLFS*SSGGNI
Trigger: AATGTTCCCACCAGAGCTCCAACTGAACAACCAGAC...AATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTCATTCCTTCTCCGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGTTTCCCTGTGAAACATaGCCAACTTTGCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LIPSPITFCLTSVMFGYMFPCET*PTLQQE
Trigger: CTCCTGCTGCAAAGTTGGCCATGTTTCACAGGGAAA...CATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCGGAGAAGGAATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTCCAAGAAGGAACAGCCCCCACCAAACATTACCCATTCAAGGTGAAAGGTGCCAACACTTCATTTTaGAATCTCATAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLQEGTAPTKHYPFKVKGANTSF*NLISSH
Trigger: GTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGC...ACCTTTCACCTTGAATGGGTAATGTTTGGTGGGGGCTGTTCCTTCTTGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAATCCATGATCTCAAAATaGTCCGACTCAAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQSMISK*SDSRLL
Trigger: GAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGA...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CGATCACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCTTCCATGATTGCGTCTaGCTGGGGATGATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: RSLSALHPLCLGTCLTIPFHDCV*LGMILK
Trigger: CTTTAGAATCATCCCCAGCCAGACGCAATCATGGAA...GGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGTGATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
3UTR CAA 72 bp AGGATGGCCATGAGCGGTGTTGGCCAACACTTCATTTaGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: RMAMSGVGQHFI*ESHKQPLFQKF
Trigger: AAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp AGTTCTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATACTTGGAGGTCTGGCTaGTGTCTTCACTTGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SSTFAMSHRQPLESHYCHTWRSG*CLHLFC
Trigger: GCAAAACAAGTGAAGACATCAGCCAGACCTCCAAGT...ATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGAGAGTTTCATCCTTCCTCCATaGTCTCAAAATGGTCCGACT +
Preference number: 4 (lower is better)
Translates to: QEPFFETRPIFSLEDDESFILPP*SQNGPT
Trigger: AGTCGGACCATTTTGAGATCATGGAGGAAGGATGAA...ACTCTCATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp CTTCTTCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAACATCGCCAGCCTCTTaGGAGTCATTATTGTCATTT +
Preference number: 4 (lower is better)
Translates to: LLHPSSMISKWSDSRLLQTSPAS*ESLLSF
Trigger: AAATGACAATAATGACTCTCAAGAGGCTGGCGATGT...TTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR TCA 90 bp TCTTGTAGTCACCAGCAGCAGTTCATAAGGGTAGATCTTGTACTCTCGCATGCCTACAAAGATCCTTCCTaGATTTCCTCAGATGCAATC +
Preference number: 4 (lower is better)
Translates to: SCSHQQQFIRVDLVLSHAYKDPS*ISSDAI
Trigger: GATTGCATCTGAGGAAATTCAGGAAGGATCTTTGTA...GGCATGCGAGAGTACAAGATCTACCCTTATGAACTGCTGCTGGTGACTACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515171.5
CDS-3UTR TCA 90 bp CCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTGGTAGGCTTGGTGCTTTCATTTTaGAAAATGTGCAGGGTTCAG +
Preference number: 4 (lower is better)
Translates to: PYIRYVWVHALRYPLLVGLVLSF*KMCRVQ
Trigger: CTGAACCCTGCACATTTTTCAAAATGAAAGCACCAA...GCCTACCAATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309868.12
ENST00000326685.11
CDS-3UTR GCA 90 bp ACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCACCCACTTTGGAGCTTGTaGATGCTGCGGTCAAAATCA +
Preference number: 4 (lower is better)
Translates to: TFAMSHRQPLESHYCHFHPLWSL*MLRSKS
Trigger: TGATTTTGACCGCAGCATGCACAAGCTCCAAAGTGG...GTGAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp ATAGACCAAGAACCTTTCTTTGAGACACGGCCTATTTTCTCTCTGGAGGATGATGGTCCCAAGAAATCCTaGAGCTCTGATTCTAACAGG +
Preference number: 4 (lower is better)
Translates to: IDQEPFFETRPIFSLEDDGPKKS*SSDSNR
Trigger: CCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC...ATCATCCTCCAGAGAGAAAATAGGCCGTGTCTCAAAGAAAGGTTCTTGGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp CAAAGATCCTTCCTGAATTTCCTCAGATGCAATCTCTTCCAGAAAGCTTTCCTGGGTCCCAAGAAATCCTaGAGCTCTGATTCTAACAGG +
Preference number: 4 (lower is better)
Translates to: QRSFLNFLRCNLFQKAFLGPKKS*SSDSNR
Trigger: CCTGTTAGAATCAGAGCTGCAGGATTTCTTGGGACC...CAGGAAAGCTTTCTGGAAGAGATTGCATCTGAGGAAATTCAGGAAGGATCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR GCA 90 bp TCATCCTTCCTCCATGATCTCAAAATGGTCCGACTCAAGGCTTCTCCAAGAAGGTTATGTTTGGGTACATaGCTTACGATACCCGCTATT +
Preference number: 4 (lower is better)
Translates to: SSFLHDLKMVRLKASPRRLCLGT*LTIPAI
Trigger: AATAGCGGGTATCGTAAGGCATGTACCCAAACATAA...CCTTCTTGGAGAAGCCTTGAGTCGGACCATTTTGAGATCATGGAGGAAGGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp TCATTTTGGAATCTCATAAGCAGCCACTCTTCCAAAAGTTTCCCTGTGAAACATCATCTGATGTGGAAGTaGTTGTTGTGCACGCGGACC +
Preference number: 4 (lower is better)
Translates to: SFWNLISSHSSKSFPVKHHLMWK*LLCTRT
Trigger: GGTCCGCGTGCACAACAACCACTTCCACATCAGATG...ATGTTTCACAGGGAAACTTTTGGAAGAGTGGCTGCTTATGAGATTCCAAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTGTGCAGATGTACTCCTaGTTCTTGAAGAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSVQMYS*FLKKKP
Trigger: AGGCTTCTTCTTCAAGAACCAGGAGTACATCTGCAC...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCGACTGGGAGCACGTTTaGCACACACATTCTTTACCG +
Preference number: 4 (lower is better)
Translates to: ALAAYDFSLTSRTLSHSFDWEHV*HTHSLP
Trigger: CGGTAAAGAATGTGTGTGCCAAACGTGCTCCCAGTC...GAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCGTCGGACTCACAGTATaGAACACCATCCTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFVGLTV*NTILAD
Trigger: ATCAGCAAGGATGGTGTTCCATACTGTGAGTCCGAC...GAAAATGACAATAATGACTCTCAAGAGGCTGGCGATGTGACATGGCAAATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATCTGTACTTGGAGGTCTaGCTGATGTCTTCACTTGTT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYLYLEV*LMSSLV
Trigger: AACAAGTGAAGACATCAGCCAGACCTCCAAGTACAG...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACAGCATAGTAGGGGTCTaGCGAGTAGATGGGACTGTA +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHSIVGV*RVDGTV
Trigger: TACAGTCCCATCTACTCGCCAGACCCCTACTATGCT...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ACTTTCTGCCTTACATCCGTTATGTTTGGGTACATGCCTTACGATACCCGCTATTTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: TFCLTSVMFGYMPYDTRYFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...ATAGCGGGTATCGTAAGGCATGTACCCAAACATAACGGATGTAAGGCAGAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AGCTTTCCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACATTTAGGAAAGAGAGTTaGACCTTGGGGCACTCAAGT +
Preference number: 4 (lower is better)
Translates to: SFPGSALAAYDFSLTSRTFRKES*TLGHSS
Trigger: ACTTGAGTGCCCCAAGGTCCAACTCTCTTTCCTAAA...TGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGGAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CCTGGGTCTGCTCTAGCTGCATATGACTTTTCATTAACATCACGCACACTTTCTGGCCTATTTTCTCTCTaGAGGATGATGAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PGSALAAYDFSLTSRTLSGLFSL*RMMRVV
Trigger: GACAACTCTCATCATCCTCCAGAGAGAAAATAGGCC...AGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGCAGCTAGAGCAGACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp ATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGAGAGAAGAGAGACTTCGCCAACACTTCATTTTaGAATCTCATAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ISPRNLRKGPRSREKRDFANTSF*NLISSH
Trigger: GTGGCTGCTTATGAGATTCCAAAATGAAGTGTTGGC...GAAGTCTCTCTTCTCTCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp GCATATGACTTTTCATTAACATCACGCACACTTTCTCATTCCTTCTCCGATCACGGCCATGAGCGGTGTTaGCCAACACTTCATTTTGGA +
Preference number: 4 (lower is better)
Translates to: AYDFSLTSRTLSHSFSDHGHERC*PTLHFG
Trigger: TCCAAAATGAAGTGTTGGCCAACACCGCTCATGGCC...GTGATCGGAGAAGGAATGAGAAAGTGTGCGTGATGTTAATGAAAAGTCATATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000504238.5
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp AACCACATGGTCAGCATCAGCCCTAGAAATTTAAGAAAGGGGCCACGAAGCAGATACATCCGTTATGTTTaGGTACATGCCTTACGATAC +
Preference number: 4 (lower is better)
Translates to: NHMVSISPRNLRKGPRSRYIRYV*VHALRY
Trigger: GTATCGTAAGGCATGTACCCAAACATAACGGATGTA...TCTGCTTCGTGGCCCCTTTCTTAAATTTCTAGGGCTGATGCTGACCATGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309868.12
ENST00000326685.11
ENST00000506113.5
ENST00000515171.5
CDS-3UTR CCA 90 bp CTACATTTGCCATGTCACATCGCCAGCCTCTTGAGAGTCATTATTGTCATTTTCTCCAGAAAGCTTTCCTaGGTCTGCTCTAGCTGCATA +
Preference number: 4 (lower is better)
Translates to: LHLPCHIASLLRVIIVIFSRKLS*VCSSCI
Trigg