RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABLIM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000163995

Ensembl transcript IDs: ENST00000341937.9, ENST00000361581.9, ENST00000361737.9, ENST00000407564.7, ENST00000428004.6, ENST00000447017.7, ENST00000502800.1, ENST00000504172.1, ENST00000505872.5, ENST00000509819.1, ENST00000510277.1, ENST00000512594.5, ENST00000514025.5, ENST00000515079.1, ENST00000545242.6, ENST00000676532.1

Found 1239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTaGGGCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCC +
Preference number: 1 (lower is better)
Translates to: WHCPRRSLPRLRVCL*GQAAQAPKGRVPTP
Trigger: GGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 90 bp CAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: QQASQLTSRPPLSPT*PAPGPGHLENAGKV
Trigger: CACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 90 bp CCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTaGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCC +
Preference number: 1 (lower is better)
Translates to: PAPGPGHLENAGKVG*AAATCVLHLMPDTA
Trigger: GGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 90 bp AGGCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTC +
Preference number: 1 (lower is better)
Translates to: RPGCPGSEGPCAHPR*WCQQPSSTSLTAHV
Trigger: GACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 90 bp CATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCCCTaGCTTCCACCCGGCAGCCCGGACGCCTTTCTCCTAAACAGCCCA +
Preference number: 1 (lower is better)
Translates to: HQPDHAHVCSGGNRP*LPPGSPDAFLLNSP
Trigger: TGGGCTGTTTAGGAGAAAGGCGTCCGGGCTGCCGGGTGGAAGTCAGGGCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR TCA 90 bp CCTCTCCCAGCCCCTGCTTCGAAGCTAAGCCCAAGCCTTGCCCAATaGAAACTGCCCCCAGCCCAGCTGAGACCCGCAGACCGCTTCTGG +
Preference number: 1 (lower is better)
Translates to: PLPAPASKLSPSLAQ*KLPPAQLRPADRFW
Trigger: CCAGAAGCGGTCTGCGGGTCTCAGCTGGGCTGGGGGCAGTTTTCATTGGGCAAGGCTTGGGCTTAGCTTCGAAGCAGGGGCTGGGAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 90 bp CCACTCTACAGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTG +
Preference number: 1 (lower is better)
Translates to: PLYSLSLTPSHSGEG*REASRLGPKLPAGV
Trigger: CACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 90 bp CTGCACCCTAACACACACCTAATGACAGACACCAACGCCTTCGCTTaGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCTGCTGGCTT +
Preference number: 1 (lower is better)
Translates to: LHPNTHLMTDTNAFA*GARPASCSGMPCWL
Trigger: AAGCCAGCAGGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTCTGTCATTAGGTGTGTGTTAGGGTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 90 bp TTGTGTAGGCATCTAGGGGTCGATCTGGAGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGAC +
Preference number: 1 (lower is better)
Translates to: LCRHLGVDLEEERSA*RGAGGRCPVLSLVD
Trigger: GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTCCTCCAGATCGACCCCTAGATGCCTACACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 90 bp ATATTAGGTGCTAAAAACTCCCCCTCCCTAGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTA +
Preference number: 1 (lower is better)
Translates to: ILGAKNSPSLAELGG*EAECETGLGVSWAL
Trigger: TAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAGTTTTTAGCACCTAATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 90 bp GGAGCAGGTCTGGGTTTCTGCATTCTTGCACACCTTGGAAATCTGTaGGGGGACATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGG +
Preference number: 1 (lower is better)
Translates to: GAGLGFCILAHLGNL*GDMQAWPSLAHWLG
Trigger: CCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCCTCACAGATTTCCAAGGTGTGCAAGAATGCAGAAACCCAGACCTGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 90 bp GAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTaGAGAATAAGGCTGGAGGCCGCTCCCCTGCGGAGGGACCGTAAA +
Preference number: 1 (lower is better)
Translates to: EDHTKNRLKPHRSER*RIRLEAAPLRRDRK
Trigger: TTTACGGTCCCTCCGCAGGGGAGCGGCCTCCAGCCTTATTCTCCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 90 bp AGGGAGCACATCGCTCCTGGGGCATGTGGGGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTA +
Preference number: 1 (lower is better)
Translates to: REHIAPGACGVYVSG*DTASHSTRTVHQEL
Trigger: TAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAACCCCACATGCCCCAGGAGCGATGTGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 90 bp ACCCCTAGGGTCAGGCAGACACCATCACTGTCTCTCTATGAAGCCTaGGGCTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGG +
Preference number: 1 (lower is better)
Translates to: TPRVRQTPSLSLYEA*GCASFRMSHRGQGW
Trigger: CCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAGCCTCAGGCTTCATAGAGAGACAGTGATGGTGTCTGCCTGACCCTAGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 90 bp GCGTGTGGTTGTCTGTTTCAGGGAGCACATCGCTCCTGGGGCATGTaGGGTTTATGTTTCAGGCTGAGACACCGCCAGCCACAGCACAAG +
Preference number: 1 (lower is better)
Translates to: ACGCLFQGAHRSWGM*GLCFRLRHRQPQHK
Trigger: CTTGTGCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAACCCCACATGCCCCAGGAGCGATGTGCTCCCTGAAACAGACAACCACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 90 bp TCCCCAACAGCGTGTGGTTGTCTGTTTCAGGGAGCACATCGCTCCTaGGGCATGTGGGGTTTATGTTTCAGGCTGAGACACCGCCAGCCA +
Preference number: 1 (lower is better)
Translates to: SPTACGCLFQGAHRS*GMWGLCFRLRHRQP
Trigger: TGGCTGGCGGTGTCTCAGCCTGAAACATAAACCCCACATGCCCCAGGAGCGATGTGCTCCCTGAAACAGACAACCACACGCTGTTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 90 bp CGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTaGCATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAAT +
Preference number: 1 (lower is better)
Translates to: RMEGRWRKVPCLVPC*HLSLKRPITDACKN
Trigger: ATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 90 bp CATCACTGTCTCTCTATGAAGCCTGAGGCTGTGCCTCGTTCAGGATaGGTCACAGGGGACAGGGATGGTGCCCATCACCAACTCCAAGTC +
Preference number: 1 (lower is better)
Translates to: HHCLSMKPEAVPRSG*VTGDRDGAHHQLQV
Trigger: GACTTGGAGTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAGCCTCAGGCTTCATAGAGAGACAGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR GCA 90 bp TCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCACTaGGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCG +
Preference number: 1 (lower is better)
Translates to: SQAGTSGHTQRGNTH*GRGNRLWCFIHLSA
Trigger: CGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCGCAGTGGGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR GCA 90 bp CTTTCTCCTAAACAGCCCAGGAGCAGGTCTGGGTTTCTGCATTCTTaGACACCTTGGAAATCTGTGAGGGGACATGCAGGCGTGGCCCTC +
Preference number: 1 (lower is better)
Translates to: LSPKQPRSRSGFLHS*TPWKSVRGHAGVAL
Trigger: GAGGGCCACGCCTGCATGTCCCCTCACAGATTTCCAAGGTGTGCAAGAATGCAGAAACCCAGACCTGCTCCTGGGCTGTTTAGGAGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR GCA 90 bp GATTTGAACTTGGGACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTaGTCTCACACCCCCATCCATCCTCTCCCAGCCCCTGCTTCGAAG +
Preference number: 1 (lower is better)
Translates to: DLNLGLPHCKARSFF*SHTPIHPLPAPASK
Trigger: CTTCGAAGCAGGGGCTGGGAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTCCCAAGTTCAAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 90 bp AAACAGCCCAGGAGCAGGTCTGGGTTTCTGCATTCTTGCACACCTTaGAAATCTGTGAGGGGACATGCAGGCGTGGCCCTCGTTAGCACA +
Preference number: 1 (lower is better)
Translates to: KQPRSRSGFLHSCTP*KSVRGHAGVALVST
Trigger: TGTGCTAACGAGGGCCACGCCTGCATGTCCCCTCACAGATTTCCAAGGTGTGCAAGAATGCAGAAACCCAGACCTGCTCCTGGGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR TCA 90 bp ACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTGTaGCGGCCGGTGCTGCACCCTAACACACACCTAATGACAGACACC +
Preference number: 1 (lower is better)
Translates to: TLVFHPPLSALISIL*RPVLHPNTHLMTDT
Trigger: GGTGTCTGTCATTAGGTGTGTGTTAGGGTGCAGCACCGGCCGTCACAGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR GCA 90 bp GAGAAACAGTTTCTGTTTACTGAGCAGCTACTATGGCCGGCCGAATaGCACACACATACCCAGTTCCAGTCTCCTAACACCTGGCGCCCA +
Preference number: 1 (lower is better)
Translates to: EKQFLFTEQLLWPAE*HTHTQFQSPNTWRP
Trigger: TGGGCGCCAGGTGTTAGGAGACTGGAACTGGGTATGTGTGTGGCATTCGGCCGGCCATAGTAGCTGCTCAGTAAACAGAAACTGTTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 90 bp AAGGACGGTGCATCAAGAGCTACGTCGGGTATTAGGCAGGGTACGTaGAAACCCTTGATTCCAGGGCTTTGGCCATCAGAGGAGGATGTT +
Preference number: 1 (lower is better)
Translates to: KDGASRATSGIRQGT*KPLIPGLWPSEEDV
Trigger: AACATCCTCCTCTGATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTACCCTGCCTAATACCCGACGTAGCTCTTGATGCACCGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 90 bp GAGGATGAGGATGAGAAACAGTTTCTGTTTACTGAGCAGCTACTATaGCCGGCCGAATGCCACACACATACCCAGTTCCAGTCTCCTAAC +
Preference number: 1 (lower is better)
Translates to: EDEDEKQFLFTEQLL*PAECHTHTQFQSPN
Trigger: GTTAGGAGACTGGAACTGGGTATGTGTGTGGCATTCGGCCGGCCATAGTAGCTGCTCAGTAAACAGAAACTGTTTCTCATCCTCATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: DTNAFAWGARPASCSGMPPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTGCCCGGCCAGCCTCCTaGTCCGGGATGCCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTARPAS*SGMPCW
Trigger: CCAGCAGGGCATCCCGGAGCAGGAGGCTGGCCGGGC...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: DTNAFAWGARPASCSGMPSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 2 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCGCATGGAGGGGCGCTaGCGGAAGGTGCCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTRMEGR*RKVPCL
Trigger: AAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: RNAAHGGALAEGALSCPLLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: RNAAHGGALAEGALSCPLAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: STSLTAHVPATSVPHVPSSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: LLALSQTLTAPSASLPVRLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTGGCGCTGGCGGAAGGTaGCCTGTCTTGTCCCTTGTT +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTGAGGR*PVLSLV
Trigger: AACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCC...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PTLGTVPDAHCPVCESACAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: STSLTAHVPATSVPHVPSPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 2 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCCTCCTGCTCCGGGATaGCCTGCTGGCTTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTPPAPG*PAGFKD
Trigger: ATCTTTGAAGCCAGCAGGGCATCCCGGAGCAGGAGG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: RTGKQTLVFHPPLSALISPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: SLSLTPSHSGEGWREASRPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: RLRRAVCPPPMMVSATIIHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCACACACCCCACTCTTaGCACTGTCCCAGACGCTCA +
Preference number: 2 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCHTPHS*HCPRRS
Trigger: TGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCATTAGGCAGGGTACGTaGAAACCCTTGATTCCAGGG +
Preference number: 2 (lower is better)
Translates to: DTNAFAWGARPASCSGMPIRQGT*KPLIPG
Trigger: CCCTGGAATCAAGGGTTTCCACGTACCCTGCCTAAT...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: TLGTVPDAHCPVCESACEPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: SHTPLLALSQTLTAPSASPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 2 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 2 (lower is better)
Translates to: PITDACKNHTPHSWHCPRPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 2 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCACACACCCCACTCTTaGCACTGTCCCAGACGCTCA +
Preference number: 2 (lower is better)
Translates to: NAAHGGALAEGALSCPLLHTPHS*HCPRRS
Trigger: TGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCTGCCCCCAGCCCAGCTaGGACCCGCAGACCGCTTCT +
Preference number: 2 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLCPQPS*DPQTAS
Trigger: AGAAGCGGTCTGCGGGTCTCAGCTGGGCTGGGGGCA...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp CTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LKRPITDACKNHTPHSWHPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...GTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 2 (lower is better)
Translates to: RNAAHGGALAEGALSCPLPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: WAAATCVLHLMPDTATLQPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 2 (lower is better)
Translates to: RTGKQTLVFHPPLSALISEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp AAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCGGGGACATGCAGGCGTaGCCCTCGTTAGCACACTGG +
Preference number: 2 (lower is better)
Translates to: KSALISRTMPMSALEGTGGDMQA*PSLAHW
Trigger: CCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCC...GCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: RTGKQTLVFHPPLSALISLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CAA 90 bp GCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTaGTTGACATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: AAHGGALAEGALSCP*LTFVPKETHHRRLQ
Trigger: TTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCATCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 2 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGCGCTCCTGGGGCATGTaGGGTTTATGTTTCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETRSWGM*GLCFRL
Trigger: CAGCCTGAAACATAAACCCCACATGCCCCAGGAGCG...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCCCTCGTTAGCACACTaGCTCGGGGACAGTTCTTGG +
Preference number: 2 (lower is better)
Translates to: PITNSKSALISRTMPMSAPSLAH*LGDSSW
Trigger: CCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGG...AGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CAA 90 bp GCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTaGACATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAA +
Preference number: 2 (lower is better)
Translates to: AHGGALAEGALSCPL*TFVPKETHHRRLQK
Trigger: TTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 2 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCATGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp GATGAGGATGAGGATGAGAAACAGTTTCTGTTTACTGAGCAGCTACTATGGCCGGGAGGGAACAGGCCCTaGCTTCCACCCGGCAGCCCG +
Preference number: 2 (lower is better)
Translates to: DEDEDEKQFLFTEQLLWPGGNRP*LPPGSP
Trigger: CGGGCTGCCGGGTGGAAGTCAGGGCCTGTTCCCTCC...CGGCCATAGTAGCTGCTCAGTAAACAGAAACTGTTTCTCATCCTCATCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp GAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGAGAATAGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: EDHTKNRLKPHRSERWRIEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...TATTCTCCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp TTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: LSLKRPITDACKNHTPHSAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...AGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp TTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 2 (lower is better)
Translates to: LSLKRPITDACKNHTPHSVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...AGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTGTTCTGGGGCCTCTTTaGCGCGAGGCATTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: PITNSKSALISRTMPMSAVLGPL*REAFCA
Trigger: TGCACAAAATGCCTCGCGGCAAAGAGGCCCCAGAAC...AGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp GGGACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCGCAGGTCTGGGTTTCTaGATTCTTGCACACCTTGGA +
Preference number: 2 (lower is better)
Translates to: GTGMVPITNSKSALISRTAGLGF*ILAHLG
Trigger: TCCAAGGTGTGCAAGAATGCAGAAACCCAGACCTGC...GGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp GACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCTCATCAGCCGGACCATaGCCATGTCTGCTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: DCLTAKPGLSSALTPPSISSAGP*PCLLWR
Trigger: CCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGA...GATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACAGGAGCACATCGCTCCTaGGGCATGTGGGGTTTATGT +
Preference number: 2 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTGAHRS*GMWGLC
Trigger: ACATAAACCCCACATGCCCCAGGAGCGATGTGCTCC...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CAA 90 bp CAGCTGAGACCCGCAGACCGCTTCTGGGAGGCACTGAGTGAGCACTaGCTACTGGTTTTCACCTATGATTTACAGCGGCCGGAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: QLRPADRFWEALSEH*LLVFTYDLQRPEAN
Trigger: GTTTGCTTCCGGCCGCTGTAAATCATAGGTGAAAACCAGTAGCAAGTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGGTCTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CAA 90 bp AACACCTGGCGCCCATCACACGACGGGTCAGTGGTGAGCTCAGATTaGAACTTGGGACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: NTWRPSHDGSVVSSD*NLGLPHCKARSFFC
Trigger: GCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCACTGACCCGTCGTGTGATGGGCGCCAGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp CCATCACACGACGGGTCAGTGGTGAGCTCAGATTTGAACTTGGGACTGCCTCACTCTCTCTATGAAGCCTaGGGCTGTGCCTCGTTCAGG +
Preference number: 2 (lower is better)
Translates to: PSHDGSVVSSDLNLGLPHSLYEA*GCASFR
Trigger: CCTGAACGAGGCACAGCCTCAGGCTTCATAGAGAGA...GTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCACTGACCCGTCGTGTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp TGCCACACACATACCCAGTTCCAGTCTCCTAACACCTGGCGCCCATCACACGACATCACTGTCTCTCTATaGAGCCTGAGGCTGTGCCTC +
Preference number: 2 (lower is better)
Translates to: CHTHTQFQSPNTWRPSHDITVSL*SLRLCL
Trigger: GAGGCACAGCCTCAGGCTTCATAGAGAGACAGTGAT...GTCGTGTGATGGGCGCCAGGTGTTAGGAGACTGGAACTGGGTATGTGTGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR GCA 90 bp TTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: LSLKRPITDACKNHTPHSEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...AGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCCTCGGGGACAGTTCTTaGGAAGCCGGCAAACTGCAA +
Preference number: 2 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLLGDSS*EAGKLQ
Trigger: TTGCAGTTTGCCGGCTTCCCAAGAACTGTCCCCGAG...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTACACCAAGAACAGACTaGAACCACACAGATCCGAGC +
Preference number: 2 (lower is better)
Translates to: RHRQPQHKDGASRATSGITPRTD*NHTDPS
Trigger: GCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGT...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACAACACCAAGAACAGACTaGAACCACACAGATCCGAGC +
Preference number: 2 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTTPRTD*NHTDPS
Trigger: GCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGT...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp TGTCCCTTGTTGACATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAAGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 2 (lower is better)
Translates to: CPLLTFVPKETHHRRLQKVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...TTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 2 (lower is better)
Translates to: RTGKQTLVFHPPLSALISPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCATCACACGACGGGTCAGTGGTGAGCTCAGATTTGAACTTGGGACTGCCTCACCACCAACTCCAAGTCTaGACTCATCAGCCGGACCAT +
Preference number: 2 (lower is better)
Translates to: PSHDGSVVSSDLNLGLPHHQLQV*THQPDH
Trigger: ATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTG...GTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCACTGACCCGTCGTGTGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CCA 90 bp GGCAAACTGCAAAAGCCCCATATTTCCTTCCGGTCGGTCCTTAGATTTGTGGGCGATAGCTCTGAGTTCTaGGGCCTCTTTGCCGCGAGG +
Preference number: 2 (lower is better)
Translates to: GKLQKPHISFRSVLRFVGDSSEF*GLFAAR
Trigger: CCTCGCGGCAAAGAGGCCCCAGAACTCAGAGCTATC...GCCCACAAATCTAAGGACCGACCGGAAGGAAATATGGGGCTTTTGCAGTTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp GGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGC +
Preference number: 2 (lower is better)
Translates to: GETDFGVSSTSQRAYQHPVYVSG*DTASHS
Trigger: GCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAAC...AGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR GCA 90 bp CCATCACACGACGGGTCAGTGGTGAGCTCAGATTTGAACTTGGGACTGCCTCACGGGAAGCCGGCAAACTaGAAAAGCCCCATATTTCCT +
Preference number: 2 (lower is better)
Translates to: PSHDGSVVSSDLNLGLPHGKPAN*KSPIFP
Trigger: AGGAAATATGGGGCTTTTGCAGTTTGCCGGCTTCCC...GTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCACTGACCCGTCGTGTGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CCA 90 bp CCCCTGCGGAGGGACCGTAAAATTAAACTCTATATATGTCATCTCGCGTTTAAGGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: PLRRDRKIKLYICHLAFKAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...CTTAAACGCGAGATGACATATATAGAGTTTAATTTTACGGTCCCTCCGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp GGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTCTCCCCAACAGCGTGTaGTTGTCTGTTTCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: GETDFGVSSTSQRAYQHPLPNSV*LSVSGS
Trigger: GCTCCCTGAAACAGACAACCACACGCTGTTGGGGAG...AGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGTGTCTTGTCCCTTGTTaGCATTTGTCCCTAAAGAGA +
Preference number: 2 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETCLVPC*HLSLKR
Trigger: TCTCTTTAGGGACAAATGTCAACAAGGGACAAGACA...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp ACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTAGGCAGGGTACGTGGAAACACACCAAGAACAGACTaGAACCACACAGATCCGAGC +
Preference number: 2 (lower is better)
Translates to: TRTVHQELRRVLGRVRGNTPRTD*NHTDPS
Trigger: GCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGT...GTTTCCACGTACCCTGCCTAATACCCGACGTAGCTCTTGATGCACCGTCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp GGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTGTACGTGGAAACCCTTaGTTCCAGGGCTTTGGCCAT +
Preference number: 2 (lower is better)
Translates to: GETDFGVSSTSQRAYQHPVRGNP*FQGFGH
Trigger: ATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTAC...AGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CCA 90 bp TTTACAAAGCGTTCTTTAGAGGGGTCTGTCTTTAAGGTTACCTGTGTGACGAGAGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 2 (lower is better)
Translates to: FTKRSLEGSVFKVTCVTRAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...TCTCGTCACACAGGTAACCTTAAAGACAGACCCCTCTAAAGAACGCTTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCTGCGGAGGGACCGTAAAATTAAACTCTATATATGTCATCTCGCGTTTAAGTCGCATGGAGGGGCGCTaGCGGAAGGTGCCCTGTCTT +
Preference number: 2 (lower is better)
Translates to: PCGGTVKLNSIYVISRLSRMEGR*RKVPCL
Trigger: AAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG...ACTTAAACGCGAGATGACATATATAGAGTTTAATTTTACGGTCCCTCCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCATTCTTGCACACCTTaGAAATCTGTGAGGGGACAT +
Preference number: 2 (lower is better)
Translates to: PITNSKSALISRTMPMSAHSCTP*KSVRGH
Trigger: ATGTCCCCTCACAGATTTCCAAGGTGTGCAAGAATG...AGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR TCA 90 bp TGTCCCTTGTTGACATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: CPLLTFVPKETHHRRLQKCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...TTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp CGTTCTTTAGAGGGGTCTGTCTTTAAGGTTACCTGTGTGACGAGAAAAAGAAAACTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 2 (lower is better)
Translates to: RSLEGSVFKVTCVTRKRKLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...TTTTCTTTTTCTCGTCACACAGGTAACCTTAAAGACAGACCCCTCTAAAGAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp TTTACAAAGCGTTCTTTAGAGGGGTCTGTCTTTAAGGTTACCTGTGTGACGAGACCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 2 (lower is better)
Translates to: FTKRSLEGSVFKVTCVTRPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...TCTCGTCACACAGGTAACCTTAAAGACAGACCCCTCTAAAGAACGCTTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CGTTCTTTAGAGGGGTCTGTCTTTAAGGTTACCTGTGTGACGAGAAAAAGAAAACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 2 (lower is better)
Translates to: RSLEGSVFKVTCVTRKRKHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TTTTCTTTTTCTCGTCACACAGGTAACCTTAAAGACAGACCCCTCTAAAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CCA 90 bp CCCCTGCGGAGGGACCGTAAAATTAAACTCTATATATGTCATCTCGCGTTTAAGCACACACCCCACTCTTaGCACTGTCCCAGACGCTCA +
Preference number: 2 (lower is better)
Translates to: PLRRDRKIKLYICHLAFKHTPHS*HCPRRS
Trigger: TGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTG...CTTAAACGCGAGATGACATATATAGAGTTTAATTTTACGGTCCCTCCGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR TCA 90 bp TGTGTTACTTTAAAGATATTGTGTAGGCATCTAGGGGTCGATCTGGAGGAGGAATGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 2 (lower is better)
Translates to: CVTLKILCRHLGVDLEEECAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...TTCCTCCTCCAGATCGACCCCTAGATGCCTACACAATATCTTTAAAGTAACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR GCA 90 bp AAAACACCCCTAGGGTCAGGCAGACACCATCACTGTCTCTCTATGAAGCCTGAGGGGTTTCTGCATTCTTaGACACCTTGGAAATCTGTG +
Preference number: 2 (lower is better)
Translates to: KTPLGSGRHHHCLSMKPEGFLHS*TPWKSV
Trigger: CACAGATTTCCAAGGTGTGCAAGAATGCAGAAACCC...CTCAGGCTTCATAGAGAGACAGTGATGGTGTCTGCCTGACCCTAGGGGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CCA 90 bp GGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTCAAGGAAAACAGTGGTaGCTATACCTCACATGTATT +
Preference number: 2 (lower is better)
Translates to: GETDFGVSSTSQRAYQHPQGKQW*LYLTCI
Trigger: AATACATGTGAGGTATAGCCACCACTGTTTTCCTTG...AGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR TCA 90 bp CGTTCTTTAGAGGGGTCTGTCTTTAAGGTTACCTGTGTGACGAGAAAAAGAAAAAGGGAGCTCTGTGTATaGGGACCACACCAAGAACAG +
Preference number: 2 (lower is better)
Translates to: RSLEGSVFKVTCVTRKRKRELCV*GPHQEQ
Trigger: CTGTTCTTGGTGTGGTCCTCATACACAGAGCTCCCT...TTTTCTTTTTCTCGTCACACAGGTAACCTTAAAGACAGACCCCTCTAAAGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 72 bp ACTGCCCCGTCTGCGAGTCTGCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGA +
Preference number: 3 (lower is better)
Translates to: TAPSASLPVRPG*PGSEGPCAHPR
Trigger: TCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGGCAGACTCGCAGACGGGGCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR TCA 72 bp CCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTaGGGCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTG +
Preference number: 3 (lower is better)
Translates to: PRRSLPRLRVCL*GQAAQAPKGRV
Trigger: CACACGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 72 bp TCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGGCACCTCGAGAACGCT +
Preference number: 3 (lower is better)
Translates to: SQLTSRPPLSPT*PAPGPGHLENA
Trigger: AGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 72 bp GTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGCAGCCACCTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: VPSTGARAPRER*EGGLGCSHLCA
Trigger: AGCACACAGGTGGCTGCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 72 bp TGTGAGGCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTGTCAGCAACCATCATC +
Preference number: 3 (lower is better)
Translates to: CEARLPRLRRAV*PPPMMVSATII
Trigger: GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 72 bp ACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCCTGTGAGGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: THPTLGTVPDAH*PVCESACEARL
Trigger: CAGCCTGGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 72 bp CATCTAGGGGTCGATCTGGAGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCC +
Preference number: 3 (lower is better)
Translates to: HLGVDLEEERSA*RGAGGRCPVLS
Trigger: GGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTCCTCCAGATCGACCCCTAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CAA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACTCACACACCCCACTCTaGGCACTGTCCCAGACGCTC +
Preference number: 3 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDSHTPL*ALSQTL
Trigger: GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 72 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCG +
Preference number: 3 (lower is better)
Translates to: SLSLTPSHSGEG*REASRLGPKLP
Trigger: CGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR CCA 72 bp AACACACACCTAATGACAGACACCAACGCCTTCGCTTaGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCC +
Preference number: 3 (lower is better)
Translates to: NTHLMTDTNAFA*GARPASCSGMP
Trigger: GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTCTGTCATTAGGTGTGTGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 72 bp GCTAAAAACTCCCCCTCCCTAGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCA +
Preference number: 3 (lower is better)
Translates to: AKNSPSLAELGG*EAECETGLGVS
Trigger: TGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAGTTTTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CAA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTACGGGGAAACAGACTTaGGTGTTTCATCCACCTCTC +
Preference number: 3 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTTGKQT*VFHPPL
Trigger: GAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGT...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CAA 90 bp GGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATGCCCGCTCGGGGACAGTTCTaGGGAAGCCGGCAAACTGCA +
Preference number: 3 (lower is better)
Translates to: GMVPITNSKSALISRTMPARGQF*GSRQTA
Trigger: TGCAGTTTGCCGGCTTCCCAAGAACTGTCCCCGAGC...GGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR TCA 72 bp TGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCATCAACAAGCCTCACA +
Preference number: 3 (lower is better)
Translates to: CPGSEGPCAHPR*WCQQPSSTSLT
Trigger: TGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR GCA 72 bp GGGGACAGGGATGGTGCCCATCACCAACTCCAAGTCTaGACTCATCAGCCGGACCATGCCCATGTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: GDRDGAHHQLQV*THQPDHAHVCS
Trigger: AGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 72 bp ACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTaGAGAATAAGGCTGGAGGCCGCTCCCCTGCGGAGG +
Preference number: 3 (lower is better)
Translates to: TKNRLKPHRSER*RIRLEAAPLRR
Trigger: CCTCCGCAGGGGAGCGGCCTCCAGCCTTATTCTCCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CAA 90 bp CTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACTTGCCGCGAGGCATTTaGTGCACATCACGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: LCLVQDESQGTGMVPITNLPRGI*CTSRLL
Trigger: AAGGAGCCGTGATGTGCACAAAATGCCTCGCGGCAA...GTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR TCA 72 bp ATCGCTCCTGGGGCATGTGGGGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGCACAAGGACGGTGCAT +
Preference number: 3 (lower is better)
Translates to: IAPGACGVYVSG*DTASHSTRTVH
Trigger: ATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAACCCCACATGCCCCAGGAGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR GCA 72 bp TCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATaGCCATGTCTGCTCTGGAGGGAACAGGCCCTGACT +
Preference number: 3 (lower is better)
Translates to: SPTPSLHSSAGP*PCLLWREQALT
Trigger: AGTCAGGGCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR GCA 72 bp GCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTaGCCATCACCAACTCCAAGTCTGCACTCATCAGCC +
Preference number: 3 (lower is better)
Translates to: ASFRMSHRGQGW*PSPTPSLHSSA
Trigger: GGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR TCA 72 bp CTCTCTATGAAGCCTGAGGCTGTGCCTCGTTCAGGATaGGTCACAGGGGACAGGGATGGTGCCCATCACCAA +
Preference number: 3 (lower is better)
Translates to: LSMKPEAVPRSG*VTGDRDGAHHQ
Trigger: TTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAGCCTCAGGCTTCATAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 72 bp CCATCCTATCTCCATCCTTCTCTCCCCAACAGCGTGTaGTTGTCTGTTTCAGGGAGCACATCGCTCCTGGGG +
Preference number: 3 (lower is better)
Translates to: PSYLHPSLPNSV*LSVSGSTSLLG
Trigger: CCCCAGGAGCGATGTGCTCCCTGAAACAGACAACCACACGCTGTTGGGGAGAGAAGGATGGAGATAGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 72 bp AGGAGCAGGTCTGGGTTTCTGCATTCTTGCACACCTTaGAAATCTGTGAGGGGACATGCAGGCGTGGCCCTC +
Preference number: 3 (lower is better)
Translates to: RSRSGFLHSCTP*KSVRGHAGVAL
Trigger: GAGGGCCACGCCTGCATGTCCCCTCACAGATTTCCAAGGTGTGCAAGAATGCAGAAACCCAGACCTGCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CAA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCGGTACGTGGAAACCCTaGATTCCAGGGCTTTGGCCA +
Preference number: 3 (lower is better)
Translates to: RTGKQTLVFHPPLSALISGTWKP*IPGLWP
Trigger: TGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTACC...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 72 bp TTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTGTaGCGGCCGGTGCTGCACCCTAACACACACCTAATG +
Preference number: 3 (lower is better)
Translates to: FHPPLSALISIL*RPVLHPNTHLM
Trigger: CATTAGGTGTGTGTTAGGGTGCAGCACCGGCCGTCACAGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR TCA 72 bp GTCAGGCAGACACCATCACTGTCTCTCTATGAAGCCTaGGGCTGTGCCTCGTTCAGGATGAGTCACAGGGGA +
Preference number: 3 (lower is better)
Translates to: VRQTPSLSLYEA*GCASFRMSHRG
Trigger: TCCCCTGTGACTCATCCTGAACGAGGCACAGCCTCAGGCTTCATAGAGAGACAGTGATGGTGTCTGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 72 bp AGAGGCAACACCCACTGCGGACGGGGAAACAGACTTTaGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCA +
Preference number: 3 (lower is better)
Translates to: RGNTHCGRGNRL*CFIHLSARLSA
Trigger: TGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCGCAGTGGGTGTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 72 bp TGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATaGTGCCCATCACCAACTCCAAGTCTGCACTCATCA +
Preference number: 3 (lower is better)
Translates to: CASFRMSHRGQG*CPSPTPSLHSS
Trigger: TGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CAA 90 bp AAAACACCCCTAGGGTCAGGCAGACACCATCACTGTCTCTCTATGAAGCCTGAGAGTTCTGGGGCCTCTTaGCCGCGAGGCATTTTGTGC +
Preference number: 3 (lower is better)
Translates to: KTPLGSGRHHHCLSMKPESSGAS*PRGILC
Trigger: GCACAAAATGCCTCGCGGCAAAGAGGCCCCAGAACT...CTCAGGCTTCATAGAGAGACAGTGATGGTGTCTGCCTGACCCTAGGGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR GCA 72 bp GGAACATCGGGACACACACAAAGAGGCAACACCCACTaGGGACGGGGAAACAGACTTTGGTGTTTCATCCAC +
Preference number: 3 (lower is better)
Translates to: GTSGHTQRGNTH*GRGNRLWCFIH
Trigger: GTGGATGAAACACCAAAGTCTGTTTCCCCGTCCGCAGTGGGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR GCA 72 bp GTGGTGAGCTCAGATTTGAACTTGGGACTGCCTCACTaGAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCC +
Preference number: 3 (lower is better)
Translates to: VVSSDLNLGLPH*KARSFFCSHTP
Trigger: GGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR CCA 72 bp GCATCAAGAGCTACGTCGGGTATTAGGCAGGGTACGTaGAAACCCTTGATTCCAGGGCTTTGGCCATCAGAG +
Preference number: 3 (lower is better)
Translates to: ASRATSGIRQGT*KPLIPGLWPSE
Trigger: CTCTGATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTACCCTGCCTAATACCCGACGTAGCTCTTGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR CCA 72 bp AGGCAGGGTACGTGGAAACCCTTGATTCCAGGGCTTTaGCCATCAGAGGAGGATGTTTTCTCCCCAAGACTT +
Preference number: 3 (lower is better)
Translates to: RQGTWKPLIPGL*PSEEDVFSPRL
Trigger: AAGTCTTGGGGAGAAAACATCCTCCTCTGATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTACCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CAA 90 bp TGTCCCTTGTTGACATTTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTaGGCACTGTCCCAGACGCTC +
Preference number: 3 (lower is better)
Translates to: CPLLTFVPKETHHRRLQKSHTPL*ALSQTL
Trigger: GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA...TTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CAA 90 bp GGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCATCCTCTTGATTCCAGGGCTTaGGCCATCAGAGGAGGATGT +
Preference number: 3 (lower is better)
Translates to: GETDFGVSSTSQRAYQHPLDSRA*AIRGGC
Trigger: ACATCCTCCTCTGATGGCCAAAGCCCTGGAATCAAG...AGGATGCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR GCA 72 bp TTTCTGTTTACTGAGCAGCTACTATGGCCGGCCGAATaGCACACACATACCCAGTTCCAGTCTCCTAACACC +
Preference number: 3 (lower is better)
Translates to: FLFTEQLLWPAE*HTHTQFQSPNT
Trigger: GGTGTTAGGAGACTGGAACTGGGTATGTGTGTGGCATTCGGCCGGCCATAGTAGCTGCTCAGTAAACAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CAA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGCTGTCTTGTCCCTTGTaGACATTTGTCCCTAAAGAG +
Preference number: 3 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWLSCPL*TFVPKE
Trigger: CTCTTTAGGGACAAATGTCAACAAGGGACAAGACAG...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
3UTR-3UTR CAA 90 bp TGCTCAGGCTCAGATTGCGCAATGGCAGGAAGCATATTAGGTGCTAAAAACTCCGGAAGGTGCCCTGTCTaGTCCCTTGTTGACATTTGT +
Preference number: 3 (lower is better)
Translates to: CSGSDCAMAGSILGAKNSGRCPV*SLVDIC
Trigger: ACAAATGTCAACAAGGGACAAGACAGGGCACCTTCC...GGAGTTTTTAGCACCTAATATGCTTCCTGCCATTGCGCAATCTGAGCCTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
3UTR-3UTR CAA 90 bp ATGAGAAACAGTTTCTGTTTACTGAGCAGCTACTATGGCCGGCCGAATGCCACAAGCTCAGATTTGAACTaGGGACTGCCTCACTGCAAA +
Preference number: 3 (lower is better)
Translates to: MRNSFCLLSSYYGRPNATSSDLN*GLPHCK
Trigger: TTTGCAGTGAGGCAGTCCCAAGTTCAAATCTGAGCT...TGTGGCATTCGGCCGGCCATAGTAGCTGCTCAGTAAACAGAAACTGTTTCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
3UTR-3UTR CAA 90 bp TGCTCAGGCTCAGATTGCGCAATGGCAGGAAGCATATTAGGTGCTAAAAACTCCGTTACTTTAAAGATATaGTGTAGGCATCTAGGGGTC +
Preference number: 3 (lower is better)
Translates to: CSGSDCAMAGSILGAKNSVTLKI*CRHLGV
Trigger: GACCCCTAGATGCCTACACAATATCTTTAAAGTAAC...GGAGTTTTTAGCACCTAATATGCTTCCTGCCATTGCGCAATCTGAGCCTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCCGAGCATCAGGCAGTaGCACCGCGGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLPSIRQ*HRGGGS
Trigger: GCTGCCGCCGCCGCGGTGGCACTGCCTGATGCTCGG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGGGCTCTCCCTCTGCGTaGCTGGGCCTGGCACCCACG +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGGSPSA*LGLAPT
Trigger: CGTGGGTGCCAGGCCCAGCCACGCAGAGGGAGAGCC...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGTSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: DTNAFAWGARPASCSGMPAELGG*EAECET
Trigger: CGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGC...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLAELGG*EAECET
Trigger: CGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGC...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGAGAGCACGGAGAGGCTaGGGGTGCTCCGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGRARRG*GCSGHF
Trigger: AAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGCCCGGCCAGCCTCCTaGTCCGGGATGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACARPAS*SGMPCW
Trigger: CCAGCAGGGCATCCCGGAGCAGGAGGCTGGCCGGGC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGTCTGTCACCTGCTCCTaGTGCGCCCTGGGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLSVTCS*CALGVH
Trigger: GTGGACTCCCAGGGCGCAGCAGGAGCAGGTGACAGA...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGAGAGCACGGAGAGGCTaGGGGTGCTCCGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLRARRG*GCSGHF
Trigger: AAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCT...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCCAGTGTCTGGGACGTaGAAGTGGCGAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLPVSGT*KWRGAC
Trigger: GCAGGCACCTCGCCACTTCCACGTCCCAGACACTGG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCTGCGTGGCTGGGCCTaGCACCCACGGAGGATCGGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLLRGWA*HPRRIG
Trigger: CCCGATCCTCCGTGGGTGCCAGGCCCAGCCACGCAG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCTCCCTCTGCGTGGCTaGGCCTGGCACCCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLLPLRG*AWHPRR
Trigger: CCTCCGTGGGTGCCAGGCCCAGCCACGCAGAGGGAG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCGGGCTGGGAGCAGCCTaGGGCTGCGACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAGLGAA*GCDTAL
Trigger: GAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
CDS-3UTR CCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDTSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCACACACCCCACTCTTaGCACTGTCCCAGACGCTCA +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGHTPHS*HCPRRS
Trigger: TGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCCCCTCGGTCGGCGTTaGCGAGAGCAACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTPLGRR*REQLRG
Trigger: TCCCCTCAGTTGCTCTCGCCAACGCCGACCGAGGGG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGGGGCACCGGCACACTaGGCCGAGCATCAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLGAPAH*AEHQAV
Trigger: CACTGCCTGATGCTCGGCCCAGTGTGCCGGTGCCCC...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATGCATTCCTTCCCGTTaGAGGTCACTCGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSCIPSR*RSLGPR
Trigger: CCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQETARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLAELGG*EAECET
Trigger: CGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGC...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGGCGCTGGCGGAAGGTaGCCTGTCTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSGAGGR*PVLSLV
Trigger: AACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCC...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGTGGAGGCCGCTCCCCTaGGGAGGGACCGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLWRPLP*GGTVKL
Trigger: TAATTTTACGGTCCCTCCGCAGGGGAGCGGCCTCCA...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGGAGCGTGGCTGCTTaGAAAGGGCCAGCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLWSVAA*KGPAGR
Trigger: CCGACCCGCTGGCCCTTTGCAAGCAGCCACGCTCCA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGAGCGTGGCTGCTTaGAAAGGGCCAGCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAWSVAA*KGPAGR
Trigger: CCGACCCGCTGGCCCTTTGCAAGCAGCCACGCTCCA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCCCATGGAGCGTGGCTaGTTGCAAAGGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLPMERG*LQRASG
Trigger: CCCGCTGGCCCTTTGCAAGCAGCCACGCTCCATGGG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGCAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGAGCGGATGCCGAACTTaGCGTGATAGTCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGSGCRT*RDSQLR
Trigger: GCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVREERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCCCTCGGTCGGCGTTaGCGAGAGCAACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPLGRR*REQLRG
Trigger: TCCCCTCAGTTGCTCTCGCCAACGCCGACCGAGGGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCACAGATCCGAGCGGTaGAGAATAAGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLHRSER*RIRLEA
Trigger: GGCCTCCAGCCTTATTCTCCACCGCTCGGATCTGTG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCTGCGTGGCTGGGCCTaGCACCCACGGAGGATCGGG +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSLRGWA*HPRRIG
Trigger: CCCGATCCTCCGTGGGTGCCAGGCCCAGCCACGCAG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCACTGTGTCTCCCCCTaGCACCCCCATGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLHCVSP*HPHGAW
Trigger: CCACGCTCCATGGGGGTGCCAGGGGGAGACACAGTG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACCAGCACGCGCCCCGTaGTGTATTTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSPARAP*CISHSC
Trigger: ACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSCLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGGGAATAGGGGAATCGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLGIGES*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACGATTCCCCTATTCC...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQESTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGCACAGGATCGCCGTaGTGGGCGACTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLCTGSP*WATSPA
Trigger: CGCTGGAGAAGTCGCCCAGCACGGCGATCCTGTGCA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCGGGGTGGTAGGTCTTaGCCAGCGCCGACACCACCT +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACRGGRS*PAPTPP
Trigger: AGGTGGTGTCGGCGCTGGGCAAGACCTACCACCCCG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCGGAGAGGCTGGGGGTaGTCCGGCCACTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACRRGWG*SGHFHC
Trigger: GCAGTGAAAGTGGCCGGAGCACCCCCAGCCTCTCCG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCGTGGAAGTGGCGAGGTaGCTGCTGGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSVEVAR*LLVGGG
Trigger: CCCTCCACCTACCAGCAGGCACCTCGCCACTTCCAC...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACCTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGCTGGCATCCGGGTCTaGTCCACAGGGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLAGIRV*STGGQI
Trigger: AATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGC...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGCTCCCTGGAACGTGTaGCTGCGAGGGTGGACACCC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACAPWNV*LRGWTP
Trigger: GGGTGTCCACCCTCGCAGGCACACGTTCCAGGGAGC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR CCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGGGGCTGGGAGCAGCCTaGGGCTGCGACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVGLGAA*GCDTAL
Trigger: GAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
CDS-3UTR CCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASTSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACETSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGAGAGCACGGAGAGGCTaGGGGTGCTCCGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQERARRG*GCSGHF
Trigger: AAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCT...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCCAGGTCTGGAGAATTaGTCCTTGTGTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGPGLEN*SLCLHP
Trigger: GGGATGCAGACACAAGGACCAATTCTCCAGACCTGG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGATCCCAAACACTTCCTaGAACTCCTCGGGCGACAAG +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGIPNTS*NSSGDK
Trigger: CTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGAT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCCCCTCGGTCGGCGTTaGCGAGAGCAACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLPLGRR*REQLRG
Trigger: TCCCCTCAGTTGCTCTCGCCAACGCCGACCGAGGGG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCGATCGCCTGGCAGCTaGACGGCTGTAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLRSPGS*TAVVLW
Trigger: CCACAGCACTACAGCCGTCCAGCTGCCAGGCGATCG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361737.9
ENST00000407564.7
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGCTCCCCAACAGCGTGTaGTTGTCTGTTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLLPNSV*LSVSGS
Trigger: GCTCCCTGAAACAGACAACCACACGCTGTTGGGGAG...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGACCAACGCCTTCGCTTaGGGAGCCCGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVTNAFA*GARPAS
Trigger: GGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGT...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACGGCCTGCACAGCTTCTaGGCACCAGAGCCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDGLHSF*APEPSL
Trigger: CAGACTGGGCTCTGGTGCCCAGAAGCTGTGCAGGCC...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCCACCCCCATGGAGCGTaGCTGCTTGCAAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAHPHGA*LLAKGQ
Trigger: CTGGCCCTTTGCAAGCAGCCACGCTCCATGGGGGTG...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HQQASQLTSRPPLSPTCPGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...TGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACCCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSVYVSG*DTASHS
Trigger: GCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAAC...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCTTATCAGCATCCTGTaGCGGCCGGTGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLLISIL*RPVLHP
Trigger: AGGGTGCAGCACCGGCCGTCACAGGATGCTGATAAG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCGCAGACCGCTTCTGGGAGGCACTGAGTGAGCACTTGCTACTGGTTTTCACCGGAGGGAACAGGCCCTaGCTTCCACCCGGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: PADRFWEALSEHLLLVFTGGNRP*LPPGSP
Trigger: CGGGCTGCCGGGTGGAAGTCAGGGCCTGTTCCCTCC...GGTGAAAACCAGTAGCAAGTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGAAGTACTTGTCCTaGACCCGCAGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAWKYLS*TRSTSP
Trigger: GGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCGGGGTGGTAGGTCTTaGCCAGCGCCGACACCACCT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSRGGRS*PAPTPP
Trigger: AGGTGGTGTCGGCGCTGGGCAAGACCTACCACCCCG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCGGGGTGGTAGGTCTTaGCCAGCGCCGACACCACCT +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVRGGRS*PAPTPP
Trigger: AGGTGGTGTCGGCGCTGGGCAAGACCTACCACCCCG...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCGGAGAGGCTGGGGGTaGTCCGGCCACTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSRRGWG*SGHFHC
Trigger: GCAGTGAAAGTGGCCGGAGCACCCCCAGCCTCTCCG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCGGAGAGGCTGGGGGTaGTCCGGCCACTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASRRGWG*SGHFHC
Trigger: GCAGTGAAAGTGGCCGGAGCACCCCCAGCCTCTCCG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGTGGAAGTGGCGAGGTaGCTGCTGGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACVEVAR*LLVGGG
Trigger: CCCTCCACCTACCAGCAGGCACCTCGCCACTTCCAC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCCTCTGTCCCCCACGTaGCCAGCACCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLPLSPT*PAPGPG
Trigger: CCCTGGCCCCGGTGCTGGGCACGTGGGGGACAGAGG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 4 (lower is better)
Translates to: DTNAFAWGARPASCSGMPPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQTSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCCCTTCTGCAAACATCTaGCCGCACCTGACACATAGC +
Preference number: 4 (lower is better)
Translates to: DTNAFAWGARPASCSGMPPSANI*PHLTHS
Trigger: GCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGG...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGACGCCGGATGCCAGATaGAGGAACCTTGAAGATACA +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGTPDAR*RNLEDT
Trigger: TGTATCTTCAAGGTTCCTCCATCTGGCATCCGGCGT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCCAGTGTCTGGGACGTaGAAGTGGCGAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLPVSGT*KWRGAC
Trigger: GCAGGCACCTCGCCACTTCCACGTCCCAGACACTGG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCACAGGGGGCCAGATTaGCATTCCGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLHRGPD*HSAGPS
Trigger: GCTTGGACCAGCGGAATGCCAATCTGGCCCCCTGTG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTCACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCGCATGGAGGGGCGCTaGCGGAAGGTGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRRMEGR*RKVPCL
Trigger: AAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTCCCCATCCGATCGCCTaGCAGCTGGACGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRPHPIA*QLDGCS
Trigger: ACTACAGCCGTCCAGCTGCCAGGCGATCGGATGGGG...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361737.9
ENST00000407564.7
CDS-3UTR CCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTGTGCGAAACGGGACTTaGCGTGTCATGGGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTVRNGT*RVMGAK
Trigger: CTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCAC...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCCCCTGGCACCCCCATaGAGCGTGGCTGCTTGCAAA +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLPLAPP*SVAACK
Trigger: TTTGCAAGCAGCCACGCTCCATGGGGGTGCCAGGGG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGGGACATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGGGACAGTTCTTGGTGCATTCCTTCCCGTTaGAGGTCACTCGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GDMQAWPSLAHWLGDSSWCIPSR*RSLGPR
Trigger: CCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCA...CCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp GGGGACATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGGGACAGTTCTTGGACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: GDMQAWPSLAHWLGDSSWTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...CCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGAAGCAGGGACAGAAATaGTGCTCTCTGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGKQGQK*CSLRKF
Trigger: GAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCCCTGCAGAGTGGCTaGTGTAGGGTGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPLQSG*CRVSRR
Trigger: TCTCCTACTCACCCTACATCAGCCACTCTGCAGGGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESACLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTTGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLCLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACESTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGACACCAAGAACAGACTaGAACCACACAGATCCGAGC +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLTPRTD*NHTDPS
Trigger: GCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGT...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACACCAGAGCCCAGTCTaGCGGCCCTGCTTGAGTGCC +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQHQSPV*RPCLSA
Trigger: GGCACTCAAGCAGGGCCGTCAGACTGGGCTCTGGTG...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGTGCACAGGATCGCCGTaGTGGGCGACTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVCTGSP*WATSPA
Trigger: CGCTGGAGAAGTCGCCCAGCACGGCGATCCTGTGCA...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGTGGAAGTACTTGTCCTaGACCCGCAGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRWKYLS*TRSTSP
Trigger: GGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCA...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACTCTGGTAGTCCAGCGTaGAGATGTACTCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDSGSPA*RCTRPA
Trigger: GGCAGGGCGAGTACATCTGCACGCTGGACTACCAGA...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCAACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGCAGCCCAAGTGCCAGTaGTTGTCCAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLQPKCQ*LSKATR
Trigger: CCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTG...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGGTGGAAGTGGCGAGGTaGCTGCTGGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVVEVAR*LLVGGG
Trigger: CCCTCCACCTACCAGCAGGCACCTCGCCACTTCCAC...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGCTGGCATCCGGGTCTaGTCCACAGGGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEAGIRV*STGGQI
Trigger: AATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGC...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECREGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCGCAGACCGCTTCTGGGAGGCACTGAGTGAGCACTTGCTACTGGTTTTCACCACTTCTCCAGCGGGCTaGGAGCAGCCTGGGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PADRFWEALSEHLLLVFTTSPAG*EQPGAA
Trigger: CGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGT...GGTGAAAACCAGTAGCAAGTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp GGGACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GTGMVPITNSKSALISRTTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...GGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCACCTTCTGCAAACATCTaGCCGCACCTGACACATAGC +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSPSANI*PHLTHS
Trigger: GCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGG...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGACGCCGGATGCCAGATaGAGGAACCTTGAAGATACA +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLTPDAR*RNLEDT
Trigger: TGTATCTTCAAGGTTCCTCCATCTGGCATCCGGCGT...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATTCTGTCTTCAGTTCTaGCTGCTTGTCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSFCLQF*LLVDTP
Trigger: CGGCGTGTCGACAAGCAGCCAGAACTGAAGACAGAA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACERPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGAGAGCACGGAGAGGCTaGGGGTGCTCCGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACERARRG*GCSGHF
Trigger: AAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCT...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCTCCCCTGCCATCCTTTaGAGAGGGTCTCTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSSPAIL*RGSLSV
Trigger: GACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGA...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTCCCCTGCCATCCTTTaGAGAGGGTCTCTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESASPAIL*RGSLSV
Trigger: GACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTCCCCTGCCATCCTTTaGAGAGGGTCTCTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLSPAIL*RGSLSV
Trigger: GACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCACAGGGGGCCAGATTaGCATTCCGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACHRGPD*HSAGPS
Trigger: GCTTGGACCAGCGGAATGCCAATCTGGCCCCCTGTG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATCCGGTCCACGTCTTTaGGCAGTTTCACGCGAATTC +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSSGPRL*AVSREF
Trigger: GAATTCGCGTGAAACTGCCCAAAGACGTGGACCGGA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTACCAGTGGGGCAGGCTaGCAGCCGTCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCTSGAG*QPSEQK
Trigger: CTTTTGTTCTGACGGCTGCCAGCCTGCCCCACTGGT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGCACACACCCCACTCTTaGCACTGTCCCAGACGCTCA +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEHTPHS*HCPRRS
Trigger: TGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTG...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGGGGCTGGGAGCAGCCTaGGGCTGCGACACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTGLGAA*GCDTVS
Trigger: AGACACAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCCAGCACGCGCCCCGTaGTGTATTTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACPARAP*CISHSC
Trigger: ACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCAAGCAGGGACAGAAATaGTGCTCTCTGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: DTNAFAWGARPASCSGMPKQGQK*CSLRKF
Trigger: GAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTT...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCAACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: KSALISRTMPMSALEGTGTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...GCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGTGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRCLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGGAATAGGGGAATCGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCGIGES*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACGATTCCCCTATTCC...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGATAGATCTTGTATTGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGIDLVL*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACAATACAAGATCTAT...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
CDS-3UTR TCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSVYVSG*DTASHS
Trigger: GCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAAC...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCACAGGATCGCCGTaGTGGGCGACTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTCTGSP*WATSPA
Trigger: CGCTGGAGAAGTCGCCCAGCACGGCGATCCTGTGCA...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCACATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQQASQLTSRPPLSPTCPHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...TGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGGGACATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGGGACAGTTCTTGGGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: GDMQAWPSLAHWLGDSSWAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...CCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCTGGAAGTACTTGTCCTaGACCCGCAGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: RLRRAVCPPPMMVSATIIWKYLS*TRSTSP
Trigger: GGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCA...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTTCTGGTAGTCCAGCGTaGAGATGTACTCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRSGSPA*RCTRPA
Trigger: GGCAGGGCGAGTACATCTGCACGCTGGACTACCAGA...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGCGGGGTGGTAGGTCTTaGCCAGCGCCGACACCACCT +
Preference number: 4 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETRGGRS*PAPTPP
Trigger: AGGTGGTGTCGGCGCTGGGCAAGACCTACCACCCCG...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTCATCTCTTCGCCTTCTaGAAACATCTGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTHLFAF*KHLAAP
Trigger: AGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATG...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAGTGGAAGTGGCGAGGTaGCTGCTGGTAGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQVEVAR*LLVGGG
Trigger: CCCTCCACCTACCAGCAGGCACCTCGCCACTTCCAC...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCTTGTATTCTCGCATaGCCCAGCTGGCATCCGGGT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLSCILA*PSWHPG
Trigger: ACCCGGATGCCAGCTGGGGCATGCGAGAATACAAGA...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCCCTGTGAGGCCAGGCTaGCCAGGCTCCGAAGGGCCG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPPVRPG*PGSEGP
Trigger: CGGCCCTTCGGAGCCTGGGCAGCCTGGCCTCACAGG...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGGGCGCTGGCGGAAGGTaGCCTGTCTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSGAGGR*PVLSLV
Trigger: AACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCC...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATGCTCAGGCTCAGATTaGGCAATGGCAGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSCSGSD*AMAGSI
Trigger: TATGCTTCCTGCCATTGCGCAATCTGAGCCTGAGCA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCTCCGGCCACTTTCACTaGCTCGGAAGTAGGGGATGT +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSSGHFH*LGSRGC
Trigger: ACATCCCCTACTTCCGAGGCAGTGAAAGTGGCCGGA...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000447017.7
ENST00000545242.6
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTCACCCTCAATGAACTaGTCGCAGCTGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESASPSMN*SQLKQR
Trigger: CCGCTGCTTCAGCTGCGACCAGTTCATTGAGGGTGA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGAGCGGATGCCGAACTTaGCGTGATAGTCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQESGCRT*RDSQLR
Trigger: GCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCT...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGAGCGGATGCCGAACTTaGCGTGATAGTCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLSGCRT*RDSQLR
Trigger: GCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCT...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTTTTACGCCAGTGTCTaGGACGTGGAAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCFYASV*DVEVAR
Trigger: CCTCGCCACTTCCACGTCCCAGACACTGGCGTAAAA...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGCCCCATCCGATCGCCTaGCAGCATGCTGTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRPHPIA*QHAVCR
Trigger: TCTACAGACAGCATGCTGCCAGGCGATCGGATGGGG...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTTCCCCTGCCATCCTTTaGAGAGGGTCTCTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACSPAIL*RGSLSV
Trigger: GACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGA...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGTCCCCTGCCATCCTTTaGAGAGGGTCTCTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRSPAIL*RGSLSV
Trigger: GACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGA...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTATCCCAAACACTTCCTaGAACTCCTCGGGCGACAAG +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTIPNTS*NSSGDK
Trigger: CTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGAT...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCAGAGCAAGGTGTGTaGGAGGGGTGTGTGCGGTTC +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSPEQGV*EGCVRF
Trigger: GAACCGCACACACCCCTCCCACACACCTTGCTCTGG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCGCATGGAGGGGCGCTaGCGGAAGGTGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPRMEGR*RKVPCL
Trigger: AAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCAGCAAGGAAAACAGTaGTGGCTATACCTCACATGT +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGQQGKQ*WLYLTC
Trigger: ACATGTGAGGTATAGCCACCACTGTTTTCCTTGCTG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACCGCTCCTGGGGCATGTaGGGTTTATGTTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDRSWGM*GLCFRL
Trigger: CAGCCTGAAACATAAACCCCACATGCCCCAGGAGCG...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGTGCATTCCTTCCCGTTaGAGGTCACTCGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQCIPSR*RSLGPR
Trigger: CCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCA...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCCAGCACGCGCCCCGTaGTGTATTTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEPARAP*CISHSC
Trigger: ACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCAGCACGCGCCCCGTaGTGTATTTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSPARAP*CISHSC
Trigger: ACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAAAGCAGGGACAGAAATaGTGCTCTCTGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSKQGQK*CSLRKF
Trigger: GAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTT...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RHRQPQHKDGASRATSGITARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCCCCTGCAGAGTGGCTaGTGTAGGGTGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRPLQSG*CRVSRR
Trigger: TCTCCTACTCACCCTACATCAGCCACTCTGCAGGGG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCCCCTGCAGAGTGGCTaGTGTAGGGTGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEPLQSG*CRVSRR
Trigger: TCTCCTACTCACCCTACATCAGCCACTCTGCAGGGG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTAGGGAGCTCTGTGTATaGGGACCACACCAAGAACAG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCRELCV*GPHQEQ
Trigger: CTGTTCTTGGTGTGGTCCTCATACACAGAGCTCCCT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTACGTGGAAACCCTTaGTTCCAGGGCTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLVRGNP*FQGFGH
Trigger: ATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTAC...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGGTTTATGTTTCAGGCTaGGACACCGCCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLVYVSG*DTASHS
Trigger: GCTGTGGCTGGCGGTGTCTCAGCCTGAAACATAAAC...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCGCCGAGCTGGGCGGGTaGGAAGCCGAGTGCGAAACG +
Preference number: 4 (lower is better)
Translates to: RTGKQTLVFHPPLSALISAELGG*EAECET
Trigger: CGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGC...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp GGGACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCCCAAGCCTTGCCCAATaGAAACTGCCCCCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTGMVPITNSKSALISRTPSLAQ*KLPPAQ
Trigger: CTGGGCTGGGGGCAGTTTTCATTGGGCAAGGCTTGG...GGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGTGGAAGTACTTGTCCTaGACCCGCAGCACCTCGCCC +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQWKYLS*TRSTSP
Trigger: GGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCA...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LCLVQDESQGTGMVPITNQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...GTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGTCTGGTAGTCCAGCGTaGAGATGTACTCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACESGSPA*RCTRPA
Trigger: GGCAGGGCGAGTACATCTGCACGCTGGACTACCAGA...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSTGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCACAGGTGCGCGCTGCTaGCCACCGATACGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: DCLTAKPGLSSALTPPSITGARC*PPIRAG
Trigger: CCCTGCCCGTATCGGTGGGCAGCAGCGCGCACCTGT...GATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: DCLTAKPGLSSALTPPSIGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...GATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: RTGKQTLVFHPPLSALISGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGCAGCCCAAGTGCCAGTaGTTGTCCAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEQPKCQ*LSKATR
Trigger: CCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTG...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTAGCTGTCACAGCGGATaGCGAACTTGGCGTGATAGT +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLSCHSG*RTWRDS
Trigger: ACTATCACGCCAAGTTCGGCATCCGCTGTGACAGCT...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLLRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTCTCCGAAGGGCCGTGTaGCCACCCCCGATGATGGTG +
Preference number: 4 (lower is better)
Translates to: RHRQPQHKDGASRATSGILRRAV*PPPMMV
Trigger: CACCATCATCGGGGGTGGGCACACGGCCCTTCGGAG...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCGCTCACTGCCCCGTCTaGGAGTCTGCCTGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLAHCPV*ESACEA
Trigger: GGCCTCACAGGCAGACTCGCAGACGGGGCAGTGAGC...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGTGGAGGCCGCTCCCCTaGGGAGGGACCGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVWRPLP*GGTVKL
Trigger: TAATTTTACGGTCCCTCCGCAGGGGAGCGGCCTCCA...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCTGGAGGCCGCTCCCCTaGGGAGGGACCGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRWRPLP*GGTVKL
Trigger: TAATTTTACGGTCCCTCCGCAGGGGAGCGGCCTCCA...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACATGGGGGTTTCCAGTTaGTCAGGCTCAGATTGCGCA +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDMGVSS*SGSDCA
Trigger: TGCGCAATCTGAGCCTGAGCAACTGGAAACCCCCAT...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp AAAACACCCCTAGGGTCAGGCAGACACCATCACTGTCTCTCTATGAAGCCTGAGTCCGCGCCCGCTCCTTaGGCACACGCCAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KTPLGSGRHHHCLSMKPESAPAP*AHARQR
Trigger: GCGCTGCCTGGCGTGTGCGCAAGGAGCGGGCGCGGA...CTCAGGCTTCATAGAGAGACAGTGATGGTGTCTGCCTGACCCTAGGGGTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGGGCTGGGAGCAGCCTaGGGCTGCGACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPGLGAA*GCDTAL
Trigger: GAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
CDS-3UTR CCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGGGCTGGGAGCAGCCTaGGGCTGCGACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPGLGAA*GCDTAL
Trigger: GAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
CDS-3UTR CCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGAGCGGATGCCGAACTTaGCGTGATAGTCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLSGCRT*RDSQLR
Trigger: GCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCT...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCCTTCTGCAAACATCTaGCCGCACCTGACACATAGC +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLPSANI*PHLTHS
Trigger: GCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACCCTTCTGCAAACATCTaGCCGCACCTGACACATAGC +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDPSANI*PHLTHS
Trigger: GCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGG...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTCTGTCTTCAGTTCTaGCTGCTTGTCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLFCLQF*LLVDTP
Trigger: CGGCGTGTCGACAAGCAGCCAGAACTGAAGACAGAA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTTCTGTCTTCAGTTCTaGCTGCTTGTCGACACGCCG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAFCLQF*LLVDTP
Trigger: CGGCGTGTCGACAAGCAGCCAGAACTGAAGACAGAA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCAGTGGAGCTTGGGCTaGAGGTCCGACACTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASQWSLG*RSDTAC
Trigger: ACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCGCCACTTTCACTGCCTaGACGGCTGTAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRATFTA*TAVVLW
Trigger: CCACAGCACTACAGCCGTCCAGGCAGTGAAAGTGGC...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000676532.1
CDS-3UTR CCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCCCAGTGTCTGGGACGTaGAAGTGGCGAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPPVSGT*KWRGAC
Trigger: GCAGGCACCTCGCCACTTCCACGTCCCAGACACTGG...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGTTTTACGCCAGTGTCTaGGACGTGGAAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLFYASV*DVEVAR
Trigger: CCTCGCCACTTCCACGTCCCAGACACTGGCGTAAAA...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCCCCATCCGATCGCCTaGCAGCATGCTGTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRPHPIA*QHAVCR
Trigger: TCTACAGACAGCATGCTGCCAGGCGATCGGATGGGG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCCCCATCCGATCGCCTaGCAGCATGCTGTCTGTAGA +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASPHPIA*QHAVCR
Trigger: TCTACAGACAGCATGCTGCCAGGCGATCGGATGGGG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGCCAGGTCTGGAGAATTaGTCCTTGTGTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLPGLEN*SLCLHP
Trigger: GGGATGCAGACACAAGGACCAATTCTCCAGACCTGG...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTCCAGGTCTGGAGAATTaGTCCTTGTGTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLPGLEN*SLCLHP
Trigger: GGGATGCAGACACAAGGACCAATTCTCCAGACCTGG...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KSALISRTMPMSALEGTGSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...GCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGCACAGGGGGCCAGATTaGCATTCCGCTGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTHRGPD*HSAGPS
Trigger: GCTTGGACCAGCGGAATGCCAATCTGGCCCCCTGTG...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTATCCCAAACACTTCCTaGAACTCCTCGGGCGACAAG +
Preference number: 4 (lower is better)
Translates to: EERSAWRGAGGRCPVLSLIPNTS*NSSGDK
Trigger: CTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGAT...AAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGACCAGTGGGGCAGGCTaGCAGCCGTCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACETSGAG*QPSEQK
Trigger: CTTTTGTTCTGACGGCTGCCAGCCTGCCCCACTGGT...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATCCCCTCGGTCGGCGTTaGCGAGAGCAACTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: DRDGAHHQLQVCTHQPDHPLGRR*REQLRG
Trigger: TCCCCTCAGTTGCTCTCGCCAACGCCGACCGAGGGG...ATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCACAGATCCGAGCGGTaGAGAATAAGGCTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRHRSER*RIRLEA
Trigger: GGCCTCCAGCCTTATTCTCCACCGCTCGGATCTGTG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGCGCTCCTGGGGCATGTaGGGTTTATGTTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLRSWGM*GLCFRL
Trigger: CAGCCTGAAACATAAACCCCACATGCCCCAGGAGCG...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGGACTTGGCGTGTCATaGGCGCTAAGGAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACGLGVS*ALRKRS
Trigger: ACTCCGTTTCCTTAGCGCCCATGACACGCCAAGTCC...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGGGACTTGGCGTGTCATaGGCGCTAAGGAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLGLGVS*ALRKRS
Trigger: ACTCCGTTTCCTTAGCGCCCATGACACGCCAAGTCC...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp GCCAGGCTGCCCAGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCATACAGACGAAGCACTTaGTGTGGAAGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: ARLPRLRRAVCPPPMMVSYRRST*CGSTCP
Trigger: AGGACAAGTACTTCCACATCAAGTGCTTCGTCTGTA...TGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCTGGGCAGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GTGAGAAGCCGAGTGCGAAACGGGACTTGGCGTGTCATGGGCGCTAAGGAAACGACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: VRSRVRNGTWRVMGAKETTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...CGTTTCCTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCACTCGGCTTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAACGGCTCGGAGACCCTaGGGTGCTGGAAGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRTARRP*GAGSRD
Trigger: GTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGT...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGTGCCCACCCCCGATaGTGGTGTCAGCAACCATCA +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTCAHPR*WCQQPS
Trigger: TGATGGTTGCTGACACCATCATCGGGGGTGGGCACA...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CACGTGCCCAGCACCGGGGCCAGGGCACCTCGAGAACGCTGGGAAGGTGGGCTGTGTCTTGTCCCTTGTTaGCATTTGTCCCTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: HVPSTGARAPRERWEGGLCLVPC*HLSLKR
Trigger: TCTCTTTAGGGACAAATGTCAACAAGGGACAAGACA...CAGCCCACCTTCCCAGCGTTCTCGAGGTGCCCTGGCCCCGGTGCTGGGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GGGACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCCACCTTGGAAATCTGTaGGGGGACATGCAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GTGMVPITNSKSALISRTHLGNL*GDMQAW
Trigger: CCACGCCTGCATGTCCCCTCACAGATTTCCAAGGTG...GGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp GGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATGCCCGTGCCTCGTTCAGGATaGGTCACAGGGGACAGGGAT +
Preference number: 4 (lower is better)
Translates to: GMVPITNSKSALISRTMPVPRSG*VTGDRD
Trigger: ATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCAC...GGGCATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTCTGGTAGTCCAGCGTaGAGATGTACTCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTSGSPA*RCTRPA
Trigger: GGCAGGGCGAGTACATCTGCACGCTGGACTACCAGA...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGCAGCCCAAGTGCCAGTaGTTGTCCAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTQPKCQ*LSKATR
Trigger: CCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTG...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGAGCTGTCACAGCGGATaGCGAACTTGGCGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRSCHSG*RTWRDS
Trigger: ACTATCACGCCAAGTTCGGCATCCGCTGTGACAGCT...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGACTTTTAGGAAGGGCTaGCAAGTCCCTGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLTFRKG*QVPVVQ
Trigger: CTGGACTACAGGGACTTGGCAGCCCTTCCTAAAAGT...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCGGAGAGGCTGGGGGTaGTCCGGCCACTTTCACTGC +
Preference number: 4 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTRRGWG*SGHFHC
Trigger: GCAGTGAAAGTGGCCGGAGCACCCCCAGCCTCTCCG...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp GGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTATTGGTCCTTGTGTCTaGATCCCCCTTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GTQRMEGRWRKVPCLVPCIGPCV*IPLEHQ
Trigger: CTGATGCTCAAGGGGGATGCAGACACAAGGACCAAT...ACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCGCTGGCATCCGGGTCTaGTCCACAGGGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLAGIRV*STGGQI
Trigger: AATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGC...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGTCTTGTATTCTCGCATaGCCCAGCTGGCATCCGGGT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSSCILA*PSWHPG
Trigger: ACCCGGATGCCAGCTGGGGCATGCGAGAATACAAGA...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTCCCATCACAGACGCCTaGAAAAATCACACACCCCAC +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACPITDA*KNHTPH
Trigger: GTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCAGGCGCTGGCGGAAGGTaGCCTGTCTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASGAGGR*PVLSLV
Trigger: AACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCC...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCACAGCACAAGGACGGTaGATCAAGAGCTACGTCGGG +
Preference number: 4 (lower is better)
Translates to: RLRRAVCPPPMMVSATIITAQGR*IKSYVG
Trigger: CCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGT...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGCCTCCTGCTCCGGGATaGCCTGCTGGCTTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQPPAPG*PAGFKD
Trigger: ATCTTTGAAGCCAGCAGGGCATCCCGGAGCAGGAGG...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCATGCTTCTCTCCGGCCTaGACAGCTTCTGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASCFSPA*TASGHQ
Trigger: CTGGTGCCCAGAAGCTGTGCAGGCCGGAGAGAAGCA...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514025.5
CDS-3UTR CCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGTCACCCTCAATGAACTaGTCGCAGCTGAAGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACESPSMN*SQLKQR
Trigger: CCGCTGCTTCAGCTGCGACCAGTTCATTGAGGGTGA...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCACAACTTCGGAGGCCCTaGGACAGGTGCGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPQLRRP*DRCALL
Trigger: CAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTG...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACGCCGGATGCCAGATaGAGGAACCTTGAAGATACA +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSTPDAR*RNLEDT
Trigger: TGTATCTTCAAGGTTCCTCCATCTGGCATCCGGCGT...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCGACCCAGTGGAGCTTaGGCTGGAGGTCCGACACTG +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLRPSGA*AGGPTL
Trigger: CAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGTTTTACGCCAGTGTCTaGGACGTGGAAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSFYASV*DVEVAR
Trigger: CCTCGCCACTTCCACGTCCCAGACACTGGCGTAAAA...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGTTTTACGCCAGTGTCTaGGACGTGGAAGTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEFYASV*DVEVAR
Trigger: CCTCGCCACTTCCACGTCCCAGACACTGGCGTAAAA...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTAGATTGGCATTCCGCTaGTCCAAGCCATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTRLAFR*SKPFFP
Trigger: TGGAAAGAATGGCTTGGACCAGCGGAATGCCAATCT...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACCCCGGCACACACCAGTaGGGCAGGCTGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: LKRPITDACKNHTPHSWHPGTHQ*GRLAAV
Trigger: GACGGCTGCCAGCCTGCCCCACTGGTGTGTGCCGGG...GTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGCACCTCGAGAACGCTaGGAAGGTGGGCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPAPRER*EGGLGC
Trigger: GCAGCCCAGCCCACCTTCCCAGCGTTCTCGAGGTGC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCACGCATGGAGGGGCGCTaGCGGAAGGTGCCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPRMEGR*RKVPCL
Trigger: AAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCG...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCACCGGGGCAAGGAAAACAGTGGTaGCTATACCTCACATGTATT +
Preference number: 4 (lower is better)
Translates to: ASQLTSRPPLSPTCPAPGQGKQW*LYLTCI
Trigger: AATACATGTGAGGTATAGCCACCACTGTTTTCCTTG...CCCCGGTGCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCATTAGGCAGGGTACGTaGAAACCCTTGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAIRQGT*KPLIPG
Trigger: CCCTGGAATCAAGGGTTTCCACGTACCCTGCCTAAT...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCGGAGCACATCGCTCCTaGGGCATGTGGGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: RLRRAVCPPPMMVSATIIGAHRS*GMWGLC
Trigger: ACATAAACCCCACATGCCCCAGGAGCGATGTGCTCC...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTCCCCAACAGCGTGTaGTTGTCTGTTTCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASLPNSV*LSVSGS
Trigger: GCTCCCTGAAACAGACAACCACACGCTGTTGGGGAG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp ACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTAGGCAGGGTACGTGGAAACACCAACGCCTTCGCTTaGGGAGCCCGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRTVHQELRRVLGRVRGNTNAFA*GARPAS
Trigger: GGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGT...GTTTCCACGTACCCTGCCTAATACCCGACGTAGCTCTTGATGCACCGTCCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGCTTCCTGTTATCCTaGTCCAAGCTTCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQECFLLS*SKLPSS
Trigger: GGAGGATGGAAGCTTGGACCAGGATAACAGGAAGCA...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
CDS-3UTR CCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTGCTTCCTGTTATCCTaGTCCAAGCTTCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLCFLLS*SKLPSS
Trigger: GGAGGATGGAAGCTTGGACCAGGATAACAGGAAGCA...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
CDS-3UTR CCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGACTCACAGTACCAGCTaGACGGCTGTAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVTHSTS*TAVVLW
Trigger: CCACAGCACTACAGCCGTCCAGCTGGTACTGTGAGT...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000447017.7
ENST00000545242.6
CDS-3UTR CCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCACCCCCATGGAGCGTaGCTGCTTGCAAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLHPHGA*LLAKGQ
Trigger: CTGGCCCTTTGCAAGCAGCCACGCTCCATGGGGGTG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCCACTGTGTCTCCCCCTaGCACCCCCATGGAGCGTGG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPHCVSP*HPHGAW
Trigger: CCACGCTCCATGGGGGTGCCAGGGGGAGACACAGTG...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCGGGCCTGGCCATTCTTaGTTTCTGTGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLGPGHS*FLCRSP
Trigger: GGGGCTGCGGCACAGAAATCAAGAATGGCCAGGCCC...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGAAGCAGGGACAGAAATaGTGCTCTCTGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQEKQGQK*CSLRKF
Trigger: GAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTT...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACTGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LCLVQDESQGTGMVPITNCLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...GTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAGGAATAGGGGAATCGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQGIGES*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACGATTCCCCTATTCC...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCTCTACAGCCTCTCCCTaGCACCAAGCCACAGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSSTASP*HQATAG
Trigger: CCCCGCTGTGGCTTGGTGTCAGGGAGAGGCTGTAGA...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTAGGGAGCTCTGTGTATaGGGACCACACCAAGAACAG +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASRELCV*GPHQEQ
Trigger: CTGTTCTTGGTGTGGTCCTCATACACAGAGCTCCCT...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGGTACGTGGAAACCCTTaGTTCCAGGGCTTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSVRGNP*FQGFGH
Trigger: ATGGCCAAAGCCCTGGAATCAAGGGTTTCCACGTAC...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp GACACCAACGCCTTCGCTTGGGGAGCCCGGCCAGCCTCCTGCTCCGGGATGCCCTCCTGGGATCAGATATaGCATTGCACTAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: DTNAFAWGARPASCSGMPSWDQI*HCTNEK
Trigger: TTTCTCATTAGTGCAATGTCATATCTGATCCCAGGA...GGGCATCCCGGAGCAGGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCTGCACAGGATCGCCGTaGTGGGCGACTTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPCTGSP*WATSPA
Trigger: CGCTGGAGAAGTCGCCCAGCACGGCGATCCTGTGCA...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCAGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCAGATGTACTCGCCCTaGCGCACGAAGAAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTQMYSP*RTKKPP
Trigger: GGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATCTG...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp CTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACGGGACAGGTGCGCGCTaGTGCCCACCGATACGGGCA +
Preference number: 4 (lower is better)
Translates to: LKRPITDACKNHTPHSWHGTGAR*CPPIRA
Trigger: TGCCCGTATCGGTGGGCAGCAGCGCGCACCTGTCCC...GTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGCCCAGCTTAAAACAGCCCAAGTaGCAGTGCTTGTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: STSLTAHVPATSVPHVPSLKQPK*QCLSKA
Trigger: AGCCTTGGACAAGCACTGGCACTTGGGCTGTTTTAA...GCTGGGCACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTTAAAACAGCCCAAGTaGCAGTGCTTGTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLLKQPK*QCLSKA
Trigger: AGCCTTGGACAAGCACTGGCACTTGGGCTGTTTTAA...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCATCTCTTCGCCTTCTaGAAACATCTGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASHLFAF*KHLAAP
Trigger: AGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATG...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTATTGGTCCTTGTGTCTaGATCCCCCTTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRIGPCV*IPLEHQ
Trigger: CTGATGCTCAAGGGGGATGCAGACACAAGGACCAAT...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCACACGACGGGTCAGTGGTGAGCTCAGATTTGAACTTGGGACTGCCTCACCTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: PSHDGSVVSSDLNLGLPHLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...GTGAGGCAGTCCCAAGTTCAAATCTGAGCTCACCACTGACCCGTCGTGTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCCTCTGTCGGTCCCGCTaGTGTGGGACAAGGACTGGG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPLCRSR*CGTRTG
Trigger: CCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAG...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGCTGGCATCCGGGTCTaGTCCACAGGGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPAGIRV*STGGQI
Trigger: AATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGAAGGTGGGCTGGGCTaGAGCCACCTGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPEGGLG*SHLCAP
Trigger: TGGAGCACACAGGTGGCTGCAGCCCAGCCCACCTTC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGGTCCCAGACGCTCACTaGCCCGTCTGCGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWVPDAH*PVCESA
Trigger: GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGAC...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCATGGAGGCCGCTCCCCTaGGGAGGGACCGTAAAATTA +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASWRPLP*GGTVKL
Trigger: TAATTTTACGGTCCCTCCGCAGGGGAGCGGCCTCCA...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp TCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTATGGGGGTTTCCAGTTaGTCAGGCTCAGATTGCGCA +
Preference number: 4 (lower is better)
Translates to: SHTPLLALSQTLTAPSASMGVSS*SGSDCA
Trigger: TGCGCAATCTGAGCCTGAGCAACTGGAAACCCCCAT...ACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACTCCTCTCCCAGCCCCTaGTTCGAAGCTAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LCLVQDESQGTGMVPITNSSPSP*FEAKPK
Trigger: CTTGGGCTTAGCTTCGAAGCAGGGGCTGGGAGAGGA...GTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp GTGTATGAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGACAGGATCGCCGTGCTaGGCGACTTCTCCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VYEDHTKNRLKPHRSERWTGSPC*ATSPAG
Trigger: GCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT...CCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTCATACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTAAGGCTACCAGGGCCTaGCCATTCTTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACKATRA*PFLISV
Trigger: CACAGAAATCAAGAATGGCCAGGCCCTGGTAGCCTT...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGGAAGGCTACCAGGGCCTaGCCATTCTTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLALSQTLTAPSASLPVRKATRA*PFLISV
Trigger: CACAGAAATCAAGAATGGCCAGGCCCTGGTAGCCTT...CCTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAAGCGGATGCCGAACTTaGCGTGATAGTCAGCTTCGC +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQSGCRT*RDSQLR
Trigger: GCGAAGCTGACTATCACGCCAAGTTCGGCATCCGCT...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGGGACAGTTCTTGGGAAGCCCCTTCTGCAAACATCTaGCCGCACCTGACACATAGC +
Preference number: 4 (lower is better)
Translates to: MQAWPSLAHWLGDSSWEAPSANI*PHLTHS
Trigger: GCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGG...GGCTTCCCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACGCCGGATGCCAGATaGAGGAACCTTGAAGATACA +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLTPDAR*RNLEDT
Trigger: TGTATCTTCAAGGTTCCTCCATCTGGCATCCGGCGT...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAAGAGCACGGAGAGGCTaGGGGTGCTCCGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRRARRG*GCSGHF
Trigger: AAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCT...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCCCAGTGTCTGGGACGTaGAAGTGGCGAGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPPVSGT*KWRGAC
Trigger: GCAGGCACCTCGCCACTTCCACGTCCCAGACACTGG...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTTCTTCCTGTTATCCTaGTCCAAGCTTCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: HPTLGTVPDAHCPVCESAFFLLS*SKLPSS
Trigger: GGAGGATGGAAGCTTGGACCAGGATAACAGGAAGAA...GGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000676532.1
CDS-3UTR CCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACTTCTTCCTGTTATCCTaGTCCAAGCTTCCATCCTCC +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDFFLLS*SKLPSS
Trigger: GGAGGATGGAAGCTTGGACCAGGATAACAGGAAGAA...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000676532.1
CDS-3UTR CCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCAGGTCTGGAGAATTaGTCCTTGTGTCTGCATCCC +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSPGLEN*SLCLHP
Trigger: GGGATGCAGACACAAGGACCAATTCTCCAGACCTGG...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCTCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: RTGKQTLVFHPPLSALISSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCATCGGTCCCGCTGCTGTaGGACAAGGACTGGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPSVPLL*DKDWVS
Trigger: GGACACCCAGTCCTTGTCCCACAGCAGCGGGACCGA...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCATCCCAAACACTTCCTaGAACTCCTCGGGCGACAAG +
Preference number: 4 (lower is better)
Translates to: RLRRAVCPPPMMVSATIIIPNTS*NSSGDK
Trigger: CTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGAT...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCACCAGTGGGGCAGGCTaGCAGCCGTCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPTSGAG*QPSEQK
Trigger: CTTTTGTTCTGACGGCTGCCAGCCTGCCCCACTGGT...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACACAGCGGGGAAGGGTaGCGTGAAGCTAGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRHSGEG*REASRL
Trigger: GAGACGGCTAGCTTCACGCCACCCTTCCCCGCTGTG...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCCCCCATCCGATCGCCTaGCAGCTGGACGGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLPHPIA*QLDGCS
Trigger: ACTACAGCCGTCCAGCTGCCAGGCGATCGGATGGGG...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp AACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGATTAGGCAGGGTACGTaGAAACCCTTGATTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NAAHGGALAEGALSCPLLIRQGT*KPLIPG
Trigger: CCCTGGAATCAAGGGTTTCCACGTACCCTGCCTAAT...CAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGGGAGCACATCGCTCCTaGGGCATGTGGGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQGAHRS*GMWGLC
Trigger: ACATAAACCCCACATGCCCCAGGAGCGATGTGCTCC...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGAGAATAACCAACGCCTTCGCTTaGGGAGCCCGGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: EDHTKNRLKPHRSERWRITNAFA*GARPAS
Trigger: GGAGGCTGGCCGGGCTCCCCAAGCGAAGGCGTTGGT...TATTCTCCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGGGACTTGGCGTGTCATaGGCGCTAAGGAAACGGAGT +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTGLGVS*ALRKRS
Trigger: ACTCCGTTTCCTTAGCGCCCATGACACGCCAAGTCC...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CTGTGCCTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACGATAGCTCTGAGTTCTaGGGCCTCTTTGCCGCGAGG +
Preference number: 4 (lower is better)
Translates to: LCLVQDESQGTGMVPITNDSSEF*GLFAAR
Trigger: CCTCGCGGCAAAGAGGCCCCAGAACTCAGAGCTATC...GTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCGGGGACATGCAGGCGTaGCCCTCGTTAGCACACTGG +
Preference number: 4 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLGDMQA*PSLAHW
Trigger: CCAGTGTGCTAACGAGGGCCACGCCTGCATGTCCCC...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp CCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCCTCTCCCCGCAGACCGCTTCTaGGAGGCACTGAGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PHCKARSFFCSHTPIHPLPADRF*EALSEH
Trigger: GTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGG...GAGAGGATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp CCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTACAGACGAAGCACTTaGTGTGGAAGTACTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PHSWHCPRRSLPRLRVCLYRRST*CGSTCP
Trigger: AGGACAAGTACTTCCACATCAAGTGCTTCGTCTGTA...CAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCTGCATTCCTTCCCGTTaGAGGTCACTCGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: RTGKQTLVFHPPLSALISCIPSR*RSLGPR
Trigger: CCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCA...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR TCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCTGCATTCCTTCCCGTTaGAGGTCACTCGGTCCCCGG +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSCIPSR*RSLGPR
Trigger: CCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCA...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: PAKITHPTLGTVPDAHCPAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...GGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCCAGCACGCGCCCCGTaGTGTATTTCTCACAGCTGT +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLPARAP*CISHSC
Trigger: ACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGAACATCTGGCCGCACCTaGCACATAGCGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRTSGRT*HIARRK
Trigger: CTTCCTGCGCGCTATGTGTCAGGTGCGGCCAGATGT...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTAAGCAGGGACAGAAATaGTGCTCTCTGAGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRKQGQK*CSLRKF
Trigger: GAACTTCCTCAGAGAGCATCATTTCTGTCCCTGCTT...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCCCCCTGCAGAGTGGCTaGTGTAGGGTGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLPLQSG*CRVSRR
Trigger: TCTCCTACTCACCCTACATCAGCCACTCTGCAGGGG...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACCTGTGTGCTCCATCTaGTGCCCGACACAGCCACTC +
Preference number: 4 (lower is better)
Translates to: PITDACKNHTPHSWHCPRPVCSI*CPTQPL
Trigger: GAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGG...TCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp AGGAACGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGATAGATCTTGTATTGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RNAAHGGALAEGALSCPLIDLVL*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACAATACAAGATCTAT...CAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
CDS-3UTR TCA 90 bp CGGACGGGGAAACAGACTTTGGTGTTTCATCCACCTCTCAGCGCGCTTATCAGCCTTATCAGCATCCTGTaGCGGCCGGTGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: RTGKQTLVFHPPLSALISLISIL*RPVLHP
Trigger: AGGGTGCAGCACCGGCCGTCACAGGATGCTGATAAG...GCTGATAAGCGCGCTGAGAGGTGGATGAAACACCAAAGTCTGTTTCCCCGTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCCTTATCAGCATCCTGTaGCGGCCGGTGCTGCACCCT +
Preference number: 4 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTLISIL*RPVLHP
Trigger: AGGGTGCAGCACCGGCCGTCACAGGATGCTGATAAG...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp CACTCATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCCCTGACTATCACTGTCTCTCTATaGAGCCTGAGGCTGTGCCTC +
Preference number: 4 (lower is better)
Translates to: HSSAGPCPCLLWREQALTITVSL*SLRLCL
Trigger: GAGGCACAGCCTCAGGCTTCATAGAGAGACAGTGAT...AGTCAGGGCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTHSHTC*TGSPCW
Trigger: CCAGCACGGCGATCCTGTGCAACACGTGTGGGAATG...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTGCAGCACCTCGCCCTTaGACACATTCCCACACGTGT +
Preference number: 4 (lower is better)
Translates to: RHRQPQHKDGASRATSGIAAPRP*THSHTC
Trigger: ACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGC...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000676532.1
CDS-3UTR GCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCTCTGGTAGTCCAGCGTaGAGATGTACTCGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLSGSPA*RCTRPA
Trigger: GGCAGGGCGAGTACATCTGCACGCTGGACTACCAGA...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACCGGGGTGGTAGGTCTTaGCCAGCGCCGACACCACCT +
Preference number: 4 (lower is better)
Translates to: LKRPITDACKNHTPHSWHRGGRS*PAPTPP
Trigger: AGGTGGTGTCGGCGCTGGGCAAGACCTACCACCCCG...GTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCCAGCCCAAGTGCCAGTaGTTGTCCAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLQPKCQ*LSKATR
Trigger: CCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTG...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GACAGGGATGGTGCCCATCACCAACTCCAAGTCTGCACTCATCAGCCGGACCATCAGCCCAAGTGCCAGTaGTTGTCCAAGGCTACCAGG +
Preference number: 4 (lower is better)
Translates to: DRDGAHHQLQVCTHQPDHQPKCQ*LSKATR
Trigger: CCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTG...ATGGTCCGGCTGATGAGTGCAGACTTGGAGTTGGTGATGGGCACCATCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAAAGCTGTCACAGCGGATaGCGAACTTGGCGTGATAGT +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQSCHSG*RTWRDS
Trigger: ACTATCACGCCAAGTTCGGCATCCGCTGTGACAGCT...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGCATCTCTTCGCCTTCTaGAAACATCTGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTHLFAF*KHLAAP
Trigger: AGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATG...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACATCTCTTCGCCTTCTaGAAACATCTGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQHLFAF*KHLAAP
Trigger: AGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATG...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp CCCGCAGACCGCTTCTGGGAGGCACTGAGTGAGCACTTGCTACTGGTTTTCACCGTCTTCAGTTCTGGCTaGTTGTCGACACGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PADRFWEALSEHLLLVFTVFSSG*LSTRRM
Trigger: CATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGAC...GGTGAAAACCAGTAGCAAGTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp GAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGACTTTTAGGAAGGGCTaGCAAGTCCCTGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EGWREASRLGPKLPAGVSTFRKG*QVPVVQ
Trigger: CTGGACTACAGGGACTTGGCAGCCCTTCCTAAAAGT...CGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: RPITDACKNHTPHSWHCPALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...GGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp GACTGCCTCACTGCAAAGCCAGGTCTTTCTTCTGCTCTCACACCCCCATCCATCGCTCTGCCTGTCCCCTaGAGAGTGGCTGATGTAGGG +
Preference number: 4 (lower is better)
Translates to: DCLTAKPGLSSALTPPSIALPVP*RVADVG
Trigger: CCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGC...GATGGATGGGGGTGTGAGAGCAGAAGAAAGACCTGGCTTTGCAGTGAGGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCATTGGTCCTTGTGTCTaGATCCCCCTTGAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRIGPCV*IPLEHQ
Trigger: CTGATGCTCAAGGGGGATGCAGACACAAGGACCAAT...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCGGCGCTGGCGGAAGGTaGCCTGTCTTGTCCCTTGTT +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSGAGGR*PVLSLV
Trigger: AACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCC...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR GCA 90 bp AGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACACAAAGAGGCAACACCTCCTGTGACGGCCGGTaGTGCACCCTAACACACACC +
Preference number: 4 (lower is better)
Translates to: SKADSQAGTSGHTQRGNTSCDGR*CTLTHT
Trigger: GGTGTGTGTTAGGGTGCAGCACCGGCCGTCACAGGA...GGTGTTGCCTCTTTGTGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp GACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCATCCTGTGACGGCCGGTaGTGCACCCTAACACACACC +
Preference number: 4 (lower is better)
Translates to: DPSQTPAKITHPTLGTVPSCDGR*CTLTHT
Trigger: GGTGTGTGTTAGGGTGCAGCACCGGCCGTCACAGGA...TGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCTCCTGTGACGGCCGGTaGTGCACCCTAACACACACC +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSSCDGR*CTLTHT
Trigger: GGTGTGTGTTAGGGTGCAGCACCGGCCGTCACAGGA...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp CCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGTGTGCTCAGGCTCAGATTaGGCAATGGCAGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: PSSTSLTAHVPATSVPHVCSGSD*AMAGSI
Trigger: TATGCTTCCTGCCATTGCGCAATCTGAGCCTGAGCA...CACGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp AGGCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCTGCTCAGGCTCAGATTaGGCAATGGCAGGAAGCATA +
Preference number: 4 (lower is better)
Translates to: RLRRAVCPPPMMVSATIICSGSD*AMAGSI
Trigger: TATGCTTCCTGCCATTGCGCAATCTGAGCCTGAGCA...GATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR GCA 90 bp AAGTCTGCACTCATCAGCCGGACCATGCCCATGTCTGCTCTGGAGGGAACAGGCGTTCTGGGGCCTCTTTaGCGCGAGGCATTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KSALISRTMPMSALEGTGVLGPL*REAFCA
Trigger: TGCACAAAATGCCTCGCGGCAAAGAGGCCCCAGAAC...GCCTGTTCCCTCCAGAGCAGACATGGGCATGGTCCGGCTGATGAGTGCAGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp ATGCAGGCGTGGCCCTCGTTAGCACACTGGCTCGGGGACAGTTCTTGGGAAGCCTTGGGACTGCCTCACTaGAAAGCCAGGTCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MQAWPSLAHWLGDSSWEALGLPH*KARSFF
Trigger: GAAGAAAGACCTGGCTTTGCAGTGAGGCAGTCCCAA...GGCTTCCCAAGAACTGTCCCCGAGCCAGTGTGCTAACGAGGGCCACGCCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp GCAAACTGCAAAAGCCCCATATTTCCTTCCGGTCGGTCCTTAGATTTGTGGGCTGGGCTGGGAGCAGCCTaGGGCTGCGACACTGCACTC +
Preference number: 4 (lower is better)
Translates to: ANCKSPIFPSGRSLDLWAGLGAA*GCDTAL
Trigger: GAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCC...AGCCCACAAATCTAAGGACCGACCGGAAGGAAATATGGGGCTTTTGCAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCAAGGCTACCAGGGCCTaGCCATTCTTGATTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRKATRA*PFLISV
Trigger: CACAGAAATCAAGAATGGCCAGGCCCTGGTAGCCTT...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGCCTCTCCCTGACACCAAGCCACAGCGGGGAAGGGTGGCGTGAAGCTAGCCGTAGATTGGCATTCCGCTaGTCCAAGCCATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SLSLTPSHSGEGWREASRRLAFR*SKPFFP
Trigger: TGGAAAGAATGGCTTGGACCAGCGGAATGCCAATCT...ACGGCTAGCTTCACGCCACCCTTCCCCGCTGTGGCTTGGTGTCAGGGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTAGATTGGCATTCCGCTaGTCCAAGCCATTCTTTCCA +
Preference number: 4 (lower is better)
Translates to: PTLGTVPDAHCPVCESACRLAFR*SKPFFP
Trigger: TGGAAAGAATGGCTTGGACCAGCGGAATGCCAATCT...ACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp GCTCCGAAGGGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAATCCGGTCCACGTCTTTaGGCAGTTTCACGCGAATTC +
Preference number: 4 (lower is better)
Translates to: APKGRVPTPDDGVSNHHQSGPRL*AVSREF
Trigger: GAATTCGCGTGAAACTGCCCAAAGACGTGGACCGGA...TTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCCCTTCGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp TGGGCTGCAGCCACCTGTGTGCTCCATCTGATGCCCGACACAGCCACTCTACAGTCCGGTCCACGTCTTTaGGCAGTTTCACGCGAATTC +
Preference number: 4 (lower is better)
Translates to: WAAATCVLHLMPDTATLQSGPRL*AVSREF
Trigger: GAATTCGCGTGAAACTGCCCAAAGACGTGGACCGGA...CTGTAGAGTGGCTGTGTCGGGCATCAGATGGAGCACACAGGTGGCTGCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTACCAGTGGGGCAGGCTaGCAGCCGTCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: RHRQPQHKDGASRATSGITSGAG*QPSEQK
Trigger: CTTTTGTTCTGACGGCTGCCAGCCTGCCCCACTGGT...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp GCGCTAAGGAAACGGAGTAAGGCCGACTCACAGGCAGGAACATCGGGACACACAACCAGTGGGGCAGGCTaGCAGCCGTCAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: ALRKRSKADSQAGTSGHTTSGAG*QPSEQK
Trigger: CTTTTGTTCTGACGGCTGCCAGCCTGCCCCACTGGT...TGTGTGTCCCGATGTTCCTGCCTGTGAGTCGGCCTTACTCCGTTTCCTTAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp TTGTCCCTAAAGAGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTGAGGAACGCAGCGCATaGAGGGGCGCTGGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LSLKRPITDACKNHTPHSEERSA*RGAGGR
Trigger: CCTTCCGCCAGCGCCCCTCCATGCGCTGCGTTCCTC...AGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTGATGGGTCTCTTTAGGGACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR CCA 90 bp ACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTAGGCAGGGTACGTGGAAACCGATCGCCTGGCAGCTaGACGGCTGTAGTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRTVHQELRRVLGRVRGNRSPGS*TAVVLW
Trigger: CCACAGCACTACAGCCGTCCAGCTGCCAGGCGATCG...GTTTCCACGTACCCTGCCTAATACCCGACGTAGCTCTTGATGCACCGTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361737.9
CDS-3UTR CCA 90 bp GGCCGTGTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCAGGAGCACATCGCTCCTaGGGCATGTGGGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: GRVPTPDDGVSNHHQQASGAHRS*GMWGLC
Trigger: ACATAAACCCCACATGCCCCAGGAGCGATGTGCTCC...TGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCACACGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp AGACACCGCCAGCCACAGCACAAGGACGGTGCATCAAGAGCTACGTCGGGTATTGTGCGAAACGGGACTTaGCGTGTCATGGGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: RHRQPQHKDGASRATSGIVRNGT*RVMGAK
Trigger: CTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCAC...AATACCCGACGTAGCTCTTGATGCACCGTCCTTGTGCTGTGGCTGGCGGTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCAGACGCTCGTGCGAAACGGGACTTaGCGTGTCATGGGCGCTAAG +
Preference number: 4 (lower is better)
Translates to: HRRLQKSHTPLLALSQTLVRNGT*RVMGAK
Trigger: CTTAGCGCCCATGACACGCCAAGTCCCGTTTCGCAC...GAGCGTCTGGGACAGTGCCAAGAGTGGGGTGTGTGATTTTTGCAGGCGTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR CCA 90 bp CCCGCAGACCGCTTCTGGGAGGCACTGAGTGAGCACTTGCTACTGGTTTTCACCACTGAGCAGCTACTATaGCCGGCCGAATGCCACACA +
Preference number: 4 (lower is better)
Translates to: PADRFWEALSEHLLLVFTTEQLL*PAECHT
Trigger: TGTGTGGCATTCGGCCGGCCATAGTAGCTGCTCAGT...GGTGAAAACCAGTAGCAAGTGCTCACTCAGTGCCTCCCAGAAGCGGTCTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR CCA 90 bp GAGGACCACACCAAGAACAGACTGAAACCACACAGATCCGAGCGGTGGAGAATAGAGTGCCGTGCTCCCTaGAACGTGTGCCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: EDHTKNRLKPHRSERWRIECRAP*NVCLRG
Trigger: CCCTCGCAGGCACACGTTCCAGGGAGCACGGCACTC...TATTCTCCACCGCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGTGGTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514025.5
3UTR CAA 72 bp GGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTaGACATTTGTCCCTAAAGAGACCCATCACAGACGC +
Preference number: 4 (lower is better)
Translates to: GALAEGALSCPL*TFVPKETHHRR
Trigger: GCGTCTGTGATGGGTCTCTTTAGGGACAAATGTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTCGTTCAGGATGAGTCACAGGGGACAGGGATGGTGCCCATCACCAACTCCAAGGCAGCCCATCCTTGCTaGTGTACTCGGCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: LVQDESQGTGMVPITNSKAAHPC*CTRHSG
Trigger: TCCTGAATGCCGAGTACATCAGCAAGGATGGGCTGC...CTTGGAGTTGGTGATGGGCACCATCCCTGTCCCCTGTGACTCATCCTGAACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp AAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCGCCAGATGGAGGAACCTTaGAGATACATCTCTTCGCCT +
Preference number: 4 (lower is better)
Translates to: KGGVKLAVSALNYRQECRQMEEP*RYISSP
Trigger: AGGCGAAGAGATGTATCTTCAAGGTTCCTCCATCTG...GCGACACTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CGCAGCGCATGGAGGGGCGCTGGCGGAAGGTGCCCTGTCTTGTCCCTTGTTGACAGAAATGATGCTCTCTaGGGAAGTTCTGGTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RSAWRGAGGRCPVLSLVDRNDAL*GSSGFL
Trigger: AAGGAAACCAGAACTTCCTCAGAGAGCATCATTTCT...GTCAACAAGGGACAAGACAGGGCACCTTCCGCCAGCGCCCCTCCATGCGCTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp TGCCACACACATACCCAGTTCCAGTCTCCTAACACCTGGCGCCCATCACACGACGTGGCTGATGTAGGGTaGGTAGGAGATCATGTCGGG +
Preference number: 4 (lower is better)
Translates to: CHTHTQFQSPNTWRPSHDVADVG*VGDHVG
Trigger: CCCGACATGATCTCCTACTCACCCTACATCAGCCAC...GTCGTGTGATGGGCGCCAGGTGTTAGGAGACTGGAACTGGGTATGTGTGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR TCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCCCCCTGCAGAGTGGCTaGTGTAGGGTGAGTAGGAGA +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSPLQSG*CRVSRR
Trigger: TCTCCTACTCACCCTACATCAGCCACTCTGCAGGGG...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCACGTCCTGTCTGCATCCCCCTTaGGCATCAGCCAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: TPDDGVSNHHQQASQLTSCLHPP*ASASCS
Trigger: AGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACA...GGACGTGAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GTGCCCACCCCCGATGATGGTGTCAGCAACCATCATCAACAAGCCTCACAGCTCGGAATAGGGGAATCGTaGGTGAAAGCTGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VPTPDDGVSNHHQQASQLGIGES*VKAVPC
Trigger: GCAGGGGACAGCTTTCACTCACGATTCCCCTATTCC...GAGCTGTGAGGCTTGTTGATGATGGTTGCTGACACCATCATCGGGGGTGGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000341937.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp GCGGGGAAGGGTGGCGTGAAGCTAGCCGTCTCGGCCCTAAACTACCGGCAGGAGTGTCTTGTCCCTTGTTaGCATTTGTCCCTAAAGAGA +
Preference number: 4 (lower is better)
Translates to: AGKGGVKLAVSALNYRQECLVPC*HLSLKR
Trigger: TCTCTTTAGGGACAAATGTCAACAAGGGACAAGACA...CTCCTGCCGGTAGTTTAGGGCCGAGACGGCTAGCTTCACGCCACCCTTCCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000341937.9
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp ACTCTTGGCACTGTCCCAGACGCTCACTGCCCCGTCTGCGAGTCTGCCTGTGAGATCTTGTATTGTGAGTaGAAGCTGTCCCCTGCCATC +
Preference number: 4 (lower is better)
Translates to: TLGTVPDAHCPVCESACEILYCE*KLSPAI
Trigger: GATGGCAGGGGACAGCTTTCACTCACAATACAAGAT...CTCACAGGCAGACTCGCAGACGGGGCAGTGAGCGTCTGGGACAGTGCCAAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361581.9
ENST00000361737.9
ENST00000407564.7
CDS-3UTR TCA 90 bp AACCATCATCAACAAGCCTCACAGCTCACGTCCCGGCCACCTCTGTCCCCCACGACACCAAGAACAGACTaGAACCACACAGATCCGAGC +
Preference number: 4 (lower is better)
Translates to: NHHQQASQLTSRPPLSPTTPRTD*NHTDPS
Trigger: GCTCGGATCTGTGTGGTTTCAGTCTGTTCTTGGTGT...CGTGGGGGACAGAGGTGGCCGGGACGTGAGCTGTGAGGCTTGTTGATGATGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000545242.6
ENST00000676532.1
CDS-3UTR TCA 90 bp CTCCCCCTCCCTAGCCGAGCTGGGCGGGTGAGAAGCCGAGTGCGAAACGGGACTTCCTGGGATCAGATATaGCATTGCACTAATGAGAAA +
Preference number: 4 (lower is better)
Translates to: LPLPSRAGRVRSRVRNGTSWDQI*HCTNEK
Trigger: TTTCTCATTAGTGCAATGTCATATCTGATCCCAGGA...AGTCCCGTTTCGCACTCGGCTTCTCACCCGCCCAGCTCGGCTAGGGAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361737.9
ENST00000447017.7
ENST00000514025.5
ENST00000676532.1
CDS-3UTR TCA 90 bp AACTGCAAAAGCCCCATATTTCCTTCCGGTCGGTCCTTAGATTTGTGGGCTTTGTGCCCCCAGCCCAGCTaGGACCCGCAGACCGCTTCT +
Preference number: 4 (lower is better)
Translates to: NCKSPIFPSGRSLDLWALCPQPS*DPQTAS
Trigger: AGAAGCGGTCTGCGGGTCTCAGCTGGGCTGGGGGCA...CAAAGCCCACAAATCTAAGGACCGACCGGAAGGAAATATGGGGCTTTTGCAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428004.6
CDS-3UTR GCA 90 bp AGACCCATCACAGACGCCTGCAAAAATCACACACCCCACTCTTGGCACTGTCCCCATTCCCACACGTGTTaGACAGGATCGCCGTGCTGG +