RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABLIM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099204

Ensembl transcript IDs: ENST00000277895.9, ENST00000369252.8, ENST00000369253.6, ENST00000369256.6, ENST00000369266.7, ENST00000392952.7, ENST00000392955.7, ENST00000428430.1, ENST00000440467.5, ENST00000466400.1, ENST00000477638.1, ENST00000481974.1, ENST00000485570.1, ENST00000533213.6, ENST00000649363.1, ENST00000651023.1, ENST00000651092.1

Found 1670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGCGGAGCCGGCAGGGCCACCTCCTCCTCTACACACAAGCATGTaGCACTTAGCGCGCCAACACACACCTGCTCAGTTTCACAGGGAA +
Preference number: 1 (lower is better)
Translates to: SAEPAGPPPPLHTSM*HLARQHTPAQFHRE
Trigger: TTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAGAGGAGGAGGTGGCCCTGCCGGCTCCGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GAGTATGACAGTGATGCAGAGTATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGGGGAGCAGGTAGGGATCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: EYDSDAEYMTKECSE*CWQQERGAGRDHRH
Trigger: GTGCCTGTGATCCCTACCTGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACTGTCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp CTGACCTCCACATCCCACCTCATCCTTCCTCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACATCAGCGCCAACACCTTTCCATGAAG +
Preference number: 1 (lower is better)
Translates to: LTSTSHLILPLWFPV*SFHELHQRQHLSMK
Trigger: CTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATGAGGTGGGATGTGGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AGGCTCATATTCGAATCTAGTGTTGCAGAGCCTGAGGGACTCTCGTaGGATGCTCTGACCTCCACATCCCACCTCATCCTTCCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: RLIFESSVAEPEGLS*DALTSTSHLILPLW
Trigger: CCACAGAGGAAGGATGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCCTCAGGCTCTGCAACACTAGATTCGAATATGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCCTGTT +
Preference number: 1 (lower is better)
Translates to: QTAPVLGGEQEPDLL*EAERVKGRFPFIPV
Trigger: AACAGGAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATGGCCAC +
Preference number: 1 (lower is better)
Translates to: QEATETPKAKLQTAV*LPTKQELVSSAHGH
Trigger: GTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp ATTTTCCTTCCACCATCTTCCATGAGAGTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGGTCACCTGTCTCTTCCATACACAGG +
Preference number: 1 (lower is better)
Translates to: IFLPPSSMRVRKRVL*APNLERSPVSSIHR
Trigger: CCTGTGTATGGAAGAGACAGGTGACCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GCATTATGGTTTCCAATGACCCCTCCCCAGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTACTGGTGCTTTCTGGCAATGCATTTC +
Preference number: 1 (lower is better)
Translates to: ALWFPMTPPQSRALL*LQIGGYWCFLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp ATCCCACCTCATCCTTCCTCTGTGGTTCCCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACACCTTTCCATGAAGGAAGTGATGTT +
Preference number: 1 (lower is better)
Translates to: IPPHPSSVVPSLILP*ATSAPTPFHEGSDV
Trigger: AACATCACTTCCTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATGAGGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GCAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAGAGCCATTTGCTAAACATGTTAGTA +
Preference number: 1 (lower is better)
Translates to: ANCSVASNQARAGLI*SWPPCQSHLLNMLV
Trigger: TACTAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp CAAATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTaGCATATATACAATCCCCTTCCTAGGGTGAACAAGCTCCACCAG +
Preference number: 1 (lower is better)
Translates to: QMFPNVALYIGTREA*HIYNPLPRVNKLHQ
Trigger: CTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp TGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCATTTGCTAAACATGTTAGTAGATCCA +
Preference number: 1 (lower is better)
Translates to: CSVASNQARAGLICS*PPCQSHLLNMLVDP
Trigger: TGGATCTACTAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp TCCTCTACACACAAGCATGTGGCACTTAGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACACGACACAGCTTTTCAAAAGGAATT +
Preference number: 1 (lower is better)
Translates to: SSTHKHVALSAPTHT*SVSQGTRHSFSKGI
Trigger: AATTCCTTTTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp ACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCACGTGTTaGGGAAACCCTAGGCTCATATTCGAATCTAGTGTTGCAGAGCCT +
Preference number: 1 (lower is better)
Translates to: THVGNHDVVSYARTC*GNPRLIFESSVAEP
Trigger: AGGCTCTGCAACACTAGATTCGAATATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCCGACGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AACTTTATTCACGAAGTTGTGAGTATGACAGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGTGCTGCTGGCAACAGGAGCGGGGAG +
Preference number: 1 (lower is better)
Translates to: NFIHEVVSMTVMQSI*QRSAVSAAGNRSGE
Trigger: CTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACTGTCATACTCACAACTTCGTGAATAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp AAGCATGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCAT +
Preference number: 1 (lower is better)
Translates to: KHGISKKPLRHQRLN*KLQCGFQPSKSWSH
Trigger: ATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTGAGTGTGTTAATAACTGGAATTTTC +
Preference number: 1 (lower is better)
Translates to: SAPGKPAIYTIPFLG*TSSTSLSVLITGIF
Trigger: GAAAATTCCAGTTATTAACACACTCAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp ACATGCATGCTCACAAAATTACTCTGGGTGAGTGAAACCAACATGTaGACACACACCCATGAATTCGACAGAGCTGGGCAAGAAGAAAGC +
Preference number: 1 (lower is better)
Translates to: TCMLTKLLWVSETNM*THTHEFDRAGQEES
Trigger: GCTTTCTTCTTGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCACATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAGCATGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATaGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGA +
Preference number: 1 (lower is better)
Translates to: FANSPIKFGPQYDIL*GTATVSPFSNCHSR
Trigger: TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TTAGAGTTGATTGATATACTGGATTGGGATGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAGGAAACTCAG +
Preference number: 1 (lower is better)
Translates to: LELIDILDWDGEDEN*KRTAPASASEEETQ
Trigger: CTGAGTTTCCTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCCATCCCAATCCAGTATATCAATCAACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: FDSWCFNQTFSFWCC*ATVVCKFSNQVWAS
Trigger: TGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AAAGAAACGTATGCATATATGATCAGTAAGCAGCTCACATCTTTCTaGATGTCAAGGTCTACAGGATTGTCTCTGTCCACCTTTGGTCAA +
Preference number: 1 (lower is better)
Translates to: KETYAYMISKQLTSF*MSRSTGLSLSTFGQ
Trigger: TTGACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGATCATATATGCATACGTTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AAAAGAAGAAAACAACGCAGCTCCTGTTGTATACATAAGGTAATGTaGAAAGCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGA +
Preference number: 1 (lower is better)
Translates to: KRRKQRSSCCIHKVM*KAHMWTLLCVSEHR
Trigger: TCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGCTTTTCACATTACCTTATGTATACAACAGGAGCTGCGTTGTTTTCTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAACATAGTTGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTaGTATCACTGCAAATCTCAAGTCCCAAATAATCTCTTTTTCTGG +
Preference number: 1 (lower is better)
Translates to: QHSWVVPLKYIIAIS*YHCKSQVPNNLFFW
Trigger: CCAGAAAAAGAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCAACTATGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp TGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAATAATCTCTTTTTCTGGATAGAAAGT +
Preference number: 1 (lower is better)
Translates to: WVVPLKYIIAISWYH*KSQVPNNLFFWIES
Trigger: ACTTTCTATCCAGAAAAAGAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp CAGGAACCAGGTTGCCCCACAACCCATCCCTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGGGGCCCACTCTGCATTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: QEPGCPTTHPSSWSL*LGNGVGGPLCIMVS
Trigger: GGAAACCATAATGCAGAGTGGGCCCCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGTTGTGGGGCAACCTGGTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAACAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAALWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGCACCAGGGAAGCCTaGCATATATACAATCCCCTT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGTREA*HIYNPL
Trigger: AAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAALPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTCTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp TTATGGTTTCCAATGACCCCTCCCCAGAGCAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGGTGCTTTCTGGCAATGCATTTCTGC +
Preference number: 2 (lower is better)
Translates to: LWFPMTPPQSRALLC*QIGGYWCFLAMHFC
Trigger: GCAGAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGGGGTCATTGGAAACCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: MFPNVALYIGTREACHIYRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: NTKPFKKGGCEITATPWTQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp TTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: LVLLSDGSLQILQSS*GLNMTSYGAPPLSV
Trigger: GACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp GAAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGTAGCGGAGTAGATGCTAGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: EKELLQPLPQKRKLS*EMTELGSGVDARAH
Trigger: ATGGGCTCTAGCATCTACTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 2 (lower is better)
Translates to: MFPNVALYIGTREACHIYTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 2 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELSRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: NQTCYGKQKELREGFLSFITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTIGGYW*FLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTAT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAACNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 2 (lower is better)
Translates to: LNILIAKSFASQVPVNSRHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAATGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQCISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp AGGTGGTTAATAAAAACTGAGATTGCTTCAGAGGACACAGGAGGGTaGATGAGACAGTCTATTTTCCTTCCACCATCTTCCATGAGAGTC +
Preference number: 2 (lower is better)
Translates to: RWLIKTEIASEDTGG*MRQSIFLPPSSMRV
Trigger: GACTCTCATGGAAGATGGTGGAAGGAAAATAGACTGTCTCATCAACCCTCCTGTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 2 (lower is better)
Translates to: LNILIAKSFASQVPVNSRNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: SVFRNIEISTPCFLASVTSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: EPDLLWEAERVKGRFPFISQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: SVFRNIEISTPCFLASVTPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: QSICKAYLPPPPTASWAASSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp CCACCATCTTCCATGAGAGTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGGTCACCTGTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PPSSMRVRKRVL*APNLERSPVSS
Trigger: GGAAGAGACAGGTGACCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCTGACTCTCATGGAAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp AGTGATGCAGAGTATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGGGGAGCAGGTAGGGAT +
Preference number: 3 (lower is better)
Translates to: SDAEYMTKECSE*CWQQERGAGRD
Trigger: ATCCCTACCTGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp CCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: PVLGGEQEPDLL*EAERVKGRFPF
Trigger: GAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 3 (lower is better)
Translates to: QSICKAYLPPPPTASWAARPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TTCGAATCTAGTGTTGCAGAGCCTGAGGGACTCTCGTaGGATGCTCTGACCTCCACATCCCACCTCATCCTT +
Preference number: 3 (lower is better)
Translates to: FESSVAEPEGLS*DALTSTSHLIL
Trigger: AAGGATGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCCTCAGGCTCTGCAACACTAGATTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CACAAGCATGTGGCACTTAGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACACGACACAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: HKHVALSAPTHT*SVSQGTRHSFS
Trigger: TGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 3 (lower is better)
Translates to: SNTKPFKKGGCEITATPWWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp CATCCTTCCTCTGTGGTTCCCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACACCTTTCCATGAAGGA +
Preference number: 3 (lower is better)
Translates to: HPSSVVPSLILP*ATSAPTPFHEG
Trigger: TCCTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGTTTAGCCTCACTCTaGATCTTTGAGTCACACACA +
Preference number: 3 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSLASL*IFESHT
Trigger: TGTGTGTGACTCAAAGATCAAGAGTGAGGCTAAACT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTaGCATATATACAATCCCCTTCCTAGGGTGAACAAG +
Preference number: 3 (lower is better)
Translates to: PNVALYIGTREA*HIYNPLPRVNK
Trigger: CTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp GCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCATTTGCTAAACATGTTA +
Preference number: 3 (lower is better)
Translates to: ASNQARAGLICS*PPCQSHLLNML
Trigger: TAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp ACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCT +
Preference number: 3 (lower is better)
Translates to: TETPKAKLQTAV*LPTKQELVSSA
Trigger: AGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp ATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: ISKKPLRHQRLN*KLQCGFQPSKS
Trigger: GCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp AGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTCTGCAAGGTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: RALLCLQIGGYW*FLAMHFCKVQF
Trigger: AAACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATaGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGC +
Preference number: 3 (lower is better)
Translates to: SPIKFGPQYDIL*GTATVSPFSNC
Trigger: GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 3 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp GTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGCCACTGTCAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: VCKFSNQVWASI*HPMGHRHCQSF
Trigger: AAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp ACAAACTCTCCCTCATCTAACTCACGTCGGGAATCATaGTGTGGTTTCATATGCACGCACGTGTTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: TNSPSSNSRRES*CGFICTHVLGK
Trigger: TTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACTGTTGGCTGGCCCGAC +
Preference number: 3 (lower is better)
Translates to: YSVFRNIEISTP*FLASVTVGWPD
Trigger: GTCGGGCCAGCCAACAGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CTCACAAAATTACTCTGGGTGAGTGAAACCAACATGTaGACACACACCCATGAATTCGACAGAGCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: LTKLLWVSETNM*THTHEFDRAGQ
Trigger: TTGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCACATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp AATGTCAAGGTCTACAGGATTGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGTGACTCATGGGAACTG +
Preference number: 3 (lower is better)
Translates to: NVKVYRIVSVHL*SMGSGSDSWEL
Trigger: CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 3 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp GGGAAGCCTGCCATATATACAATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTGAGTGTGTTAATAACT +
Preference number: 3 (lower is better)
Translates to: GKPAIYTIPFLG*TSSTSLSVLIT
Trigger: AGTTATTAACACACTCAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp ATTGATATACTGGATTGGGATGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: IDILDWDGEDEN*KRTAPASASEE
Trigger: CTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp GGGAATCATGATGTGGTTTCATATGCACGCACGTGTTaGGGAAACCCTAGGCTCATATTCGAATCTAGTGTT +
Preference number: 3 (lower is better)
Translates to: GNHDVVSYARTC*GNPRLIFESSV
Trigger: AACACTAGATTCGAATATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: WNKQEATETPKAKLQTAVQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATTGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp GACAATTTAGATTCCTTAGGTAAGAGCACAGGAGGATaGTATAGAACAGTGACTGTTCATTCCATCCCCCAA +
Preference number: 3 (lower is better)
Translates to: DNLDSLGKSTGG*YRTVTVHSIPQ
Trigger: TTGGGGGATGGAATGAACAGTCACTGTTCTATAGCATCCTCCTGTGCTCTTACCTAAGGAATCTAAATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp ACTGGTGTCAGAGAGACAGCTTGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTTCAGAGCTTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: TGVRETACNPNI*CQQEELQSFCS
Trigger: AGAACAAAAGCTCTGAAGTTCTTCCTGCTGGCACCAAATATTAGGATTACAAGCTGTCTCTCTGACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: LNILIAKSFASQVPVNSRFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 3 (lower is better)
Translates to: WNKQEATETPKAKLQTAVRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TATGCATATATGATCAGTAAGCAGCTCACATCTTTCTaGATGTCAAGGTCTACAGGATTGTCTCTGTCCACC +
Preference number: 3 (lower is better)
Translates to: YAYMISKQLTSF*MSRSTGLSLST
Trigger: GGTGGACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGATCATATATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: LNILIAKSFASQVPVNSRILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTCATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp GAACATTTCATAACTAACCCCAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGTTTCCCAATGCTCTTC +
Preference number: 3 (lower is better)
Translates to: EHFITNPKPKCR*IASCASFPMLF
Trigger: GAAGAGCATTGGGAAACTTGCACAGCTAGCTATGCATCTACATTTTGGTTTGGGGTTAGTTATGAAATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp TTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTaGACTCTTAGGAGAAACACTTTTGGGAATAATTTT +
Preference number: 3 (lower is better)
Translates to: FGQWVQEVTHGN*TLRRNTFGNNF
Trigger: AAAATTATTCCCAAAAGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATTCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHSKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp AAGATACAAGGAAAGCAGGGTTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTTATCACTGCAATCTTA +
Preference number: 3 (lower is better)
Translates to: KIQGKQGFISGS*FRVQFFITAIL
Trigger: TAAGATTGCAGTGATAAAGAACTGAACCCTAAATCAGCTCCCACTAATGAAACCCTGCTTTCCTTGTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp TGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTaGTATCACTGCAAATCTCAAGTCCCAAATAATCTC +
Preference number: 3 (lower is better)
Translates to: WVVPLKYIIAIS*YHCKSQVPNNL
Trigger: GAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TTTCTGGCAATGCATTTCTGCAAGGTGCAGTTTAAATaGACTCATATGGTACTTGATATGGAAAGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: FLAMHFCKVQFK*THMVLDMERSF
Trigger: AAAGCTTCTTTCCATATCAAGTACCATATGAGTTCATTTAAACTGCACCTTGCAGAAATGCATTGCCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAECTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCCCGAGGGAGGGGTGTaGCACCGGTGGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQPEGGV*HRWVCH
Trigger: GTGGCACACCCACCGGTGGCACACCCCTCCCTCGGG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAERAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAENDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCACTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAALAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAACLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCACGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHECHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCCGAGGGAGGGGTGTaGCACCGGTGGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPEGGV*HRWVCH
Trigger: GTGGCACACCCACCGGTGGCACACCCCTCCCTCGGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGAAACCAGCCCCGTGTaGGGCGGGCAGGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAETSPV*GGQARS
Trigger: AGAGCGTGCCTGCCCGCCGCACACGGGGCTGGTTTC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAGAACGCCGAATGTTTaGCAGCCGCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAERTPNV*QPQLFL
Trigger: GAGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCACGCCTATGAGCGGTaGAGGAGGTCCCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNHAYER*RRSQRP
Trigger: GGGTCTCTGGGACCTCCTTCACCGCTCATAGGCGTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACCTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR TCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAARKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSCHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000649363.1
CDS-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHERAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGAGAGGCTGGGGCCCTaGCTCTCCTCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSERLGP*LSSQES
Trigger: AGACTCCTGGGAGGAGAGCCAGGGCCCCAGCCTCTC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGAGAGGCTGGGGCCCTaGCTCTCCTCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRERLGP*LSSQES
Trigger: AGACTCCTGGGAGGAGAGCCAGGGCCCCAGCCTCTC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 72 bp CCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTCCAGCTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PTHSIWQLAGTR*PHNPSLQLEPF
Trigger: AAAAGGCTCCAGCTGGAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCATAGTGGCACGCCTATaGGCGGTGAAGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFIVARL*AVKEVP
Trigger: TGGGACCTCCTTCACCGCTCATAGGCGTGCCACTAT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAECHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLICTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGACCCAAGGAGCGGTaGTGCCCCACAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGPKER*CPTILS
Trigger: AGAGAGAATTGTGGGGCAGCACCGCTCCTTGGGTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000649363.1
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTCHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTACGGAGACCGTCCTGTaGGTCGAATCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFTETVL*VESDFW
Trigger: CCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGGACTTGCTCTGGGCTaGCAAGGCAGCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVGLALG*QGSCIM
Trigger: CATGATGCAGCTGCCTTGGCAGCCCAGAGCAAGTCC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPHQRLN*KLQCGF
Trigger: GAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTG...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAACATACACGCCCACGTaGGCAGTAGTCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGTYTPT*AVVLGT
Trigger: TGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCCCAAGGAGCGGTGCTaGCCCACAATTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVPKERC*PTILSV
Trigger: AACAGAGAGAATTGTGGGGCAGCACCGCTCCTTGGG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCCCAAGGAGCGGTGCTaGCCCACAATTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSPKERC*PTILSV
Trigger: AACAGAGAGAATTGTGGGGCAGCACCGCTCCTTGGG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIADTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGTAGGGGGCCCACTCTaGATTATGGTTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFVGGPL*IMVSND
Trigger: GTCATTGGAAACCATAATGCAGAGTGGGCCCCCTAC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGGCTAAGGCAACGTaGATCCCTCTAGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSAKAT*IPLETH
Trigger: GTGCGTCTCTAGAGGGATGCACGTTGCCTTAGCCGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAICLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAACTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSEEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGACCCAAGGAGCGGTaGTGCCCCACAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGPKER*CPTILS
Trigger: AGAGAGAATTGTGGGGCAGCACCGCTCCTTGGGTCC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTASGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHETSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHESVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTAATGTTTGTCACCTaGCTCAGGCCAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVMFVT*LRPGFL
Trigger: AAGGAACCCTGGCCTGAGGCAGGTGACAAACATTAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGCTGCCAAGGCAGCTaGATCATGCTGTTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGCQGS*IMLFVD
Trigger: ATCTACAAACAGCATGATGCAGCTGCCTTGGCAGCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQSRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000649363.1
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAASSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTTCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAATTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGATTTCCAAGCAATaGGAAATGGGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEWISKQ*EMGSGD
Trigger: GTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTGGATTTCCAAGCAATaGGAAATGGGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSWISKQ*EMGSGD
Trigger: GTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAILALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCACTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLRVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPRVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGEDEN*KRTAPA
Trigger: GGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTTCCACCATCTTCCATaGGAGTCAGGAAAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQFHHLP*ESGKGF
Trigger: GAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVNGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIARSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTATSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTAATGTTTGTCACCTaGCTCAGGCCAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVMFVT*LRPGFL
Trigger: AAGGAACCCTGGCCTGAGGCAGGTGACAAACATTAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIANHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGGTGCTTTCTGGCAATaGATTTCTGCAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQGAFWQ*ISARCS
Trigger: ACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHESRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGATGTCCTGGTAGGCTaGCTTGGGTTTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDDVLVG*LGFLLK
Trigger: CTTCAACAAAAACCCAAGGCAGCCTACCAGGACATC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAACATACACGCCCACGTaGGCAGTAGTCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSTYTPT*AVVLGT
Trigger: TGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGGCATGTGGCCATCTaGGAGTGTCTGGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRHVAI*ECLEIS
Trigger: CGAGATTTCCAGACACTCCCAGATGGCCACATGCCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGATAGTGGCACGCCTATaGGCGGTGAAGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWIVARL*AVKEVP
Trigger: TGGGACCTCCTTCACCGCTCATAGGCGTGCCACTAT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCAGAGATACAGCAAATaGGTGATAGTGGCACGCCTA +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLQRYSK*VIVARL
Trigger: TAGGCGTGCCACTATCACTCATTTGCTGTATCTCTG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELEEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTREEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIANGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVMQSI*QRSAVS
Trigger: ACTCACTGCACTCCTTTGTCATATACTCTGCATCAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACTCATTGTCTACTTTTaGCCGCAGCTTTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRLIVYF*PQLFLG
Trigger: ACCGAGGAAAAGCTGCGGGCAAAAGTAGACAATGAG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369253.6
ENST00000369266.7
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCACGGAGACCGTCCTGTaGGTCGAATCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTTETVL*VESDFW
Trigger: CCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGTGCTTTCTGGCAATaGATTTCTGCAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSGAFWQ*ISARCS
Trigger: ACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTATGCAAAGCATATCTaGCACCACCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPYAKHI*HHLPLL
Trigger: AAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCCAAGCAATGAGAAATaGGGAGTGGGGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHPSNEK*GVGTQG
Trigger: TCCTTGGGTCCCCACTCCCCATTTCTCATTGCTTGG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHERDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST000003