RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABLIM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000099204

Ensembl transcript IDs: ENST00000277895.9, ENST00000369252.8, ENST00000369253.6, ENST00000369256.6, ENST00000369266.7, ENST00000392952.7, ENST00000392955.7, ENST00000428430.1, ENST00000440467.5, ENST00000466400.1, ENST00000477638.1, ENST00000481974.1, ENST00000485570.1, ENST00000533213.6, ENST00000649363.1, ENST00000651023.1, ENST00000651092.1

Found 1670 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGCGGAGCCGGCAGGGCCACCTCCTCCTCTACACACAAGCATGTaGCACTTAGCGCGCCAACACACACCTGCTCAGTTTCACAGGGAA +
Preference number: 1 (lower is better)
Translates to: SAEPAGPPPPLHTSM*HLARQHTPAQFHRE
Trigger: TTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAGAGGAGGAGGTGGCCCTGCCGGCTCCGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GAGTATGACAGTGATGCAGAGTATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGGGGAGCAGGTAGGGATCACAGGCAC +
Preference number: 1 (lower is better)
Translates to: EYDSDAEYMTKECSE*CWQQERGAGRDHRH
Trigger: GTGCCTGTGATCCCTACCTGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACTGTCATACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp CTGACCTCCACATCCCACCTCATCCTTCCTCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACATCAGCGCCAACACCTTTCCATGAAG +
Preference number: 1 (lower is better)
Translates to: LTSTSHLILPLWFPV*SFHELHQRQHLSMK
Trigger: CTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATGAGGTGGGATGTGGAGGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AGGCTCATATTCGAATCTAGTGTTGCAGAGCCTGAGGGACTCTCGTaGGATGCTCTGACCTCCACATCCCACCTCATCCTTCCTCTGTGG +
Preference number: 1 (lower is better)
Translates to: RLIFESSVAEPEGLS*DALTSTSHLILPLW
Trigger: CCACAGAGGAAGGATGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCCTCAGGCTCTGCAACACTAGATTCGAATATGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCCTGTT +
Preference number: 1 (lower is better)
Translates to: QTAPVLGGEQEPDLL*EAERVKGRFPFIPV
Trigger: AACAGGAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATGGCCAC +
Preference number: 1 (lower is better)
Translates to: QEATETPKAKLQTAV*LPTKQELVSSAHGH
Trigger: GTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp ATTTTCCTTCCACCATCTTCCATGAGAGTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGGTCACCTGTCTCTTCCATACACAGG +
Preference number: 1 (lower is better)
Translates to: IFLPPSSMRVRKRVL*APNLERSPVSSIHR
Trigger: CCTGTGTATGGAAGAGACAGGTGACCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GCATTATGGTTTCCAATGACCCCTCCCCAGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTACTGGTGCTTTCTGGCAATGCATTTC +
Preference number: 1 (lower is better)
Translates to: ALWFPMTPPQSRALL*LQIGGYWCFLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp ATCCCACCTCATCCTTCCTCTGTGGTTCCCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACACCTTTCCATGAAGGAAGTGATGTT +
Preference number: 1 (lower is better)
Translates to: IPPHPSSVVPSLILP*ATSAPTPFHEGSDV
Trigger: AACATCACTTCCTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATGAGGTGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp GCAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAGAGCCATTTGCTAAACATGTTAGTA +
Preference number: 1 (lower is better)
Translates to: ANCSVASNQARAGLI*SWPPCQSHLLNMLV
Trigger: TACTAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp CAAATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTaGCATATATACAATCCCCTTCCTAGGGTGAACAAGCTCCACCAG +
Preference number: 1 (lower is better)
Translates to: QMFPNVALYIGTREA*HIYNPLPRVNKLHQ
Trigger: CTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp TGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCATTTGCTAAACATGTTAGTAGATCCA +
Preference number: 1 (lower is better)
Translates to: CSVASNQARAGLICS*PPCQSHLLNMLVDP
Trigger: TGGATCTACTAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp TCCTCTACACACAAGCATGTGGCACTTAGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACACGACACAGCTTTTCAAAAGGAATT +
Preference number: 1 (lower is better)
Translates to: SSTHKHVALSAPTHT*SVSQGTRHSFSKGI
Trigger: AATTCCTTTTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp ACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCACGTGTTaGGGAAACCCTAGGCTCATATTCGAATCTAGTGTTGCAGAGCCT +
Preference number: 1 (lower is better)
Translates to: THVGNHDVVSYARTC*GNPRLIFESSVAEP
Trigger: AGGCTCTGCAACACTAGATTCGAATATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCCGACGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AACTTTATTCACGAAGTTGTGAGTATGACAGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGTGCTGCTGGCAACAGGAGCGGGGAG +
Preference number: 1 (lower is better)
Translates to: NFIHEVVSMTVMQSI*QRSAVSAAGNRSGE
Trigger: CTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACTGTCATACTCACAACTTCGTGAATAAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp AAGCATGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGCTGGTCTCAT +
Preference number: 1 (lower is better)
Translates to: KHGISKKPLRHQRLN*KLQCGFQPSKSWSH
Trigger: ATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTGAGTGTGTTAATAACTGGAATTTTC +
Preference number: 1 (lower is better)
Translates to: SAPGKPAIYTIPFLG*TSSTSLSVLITGIF
Trigger: GAAAATTCCAGTTATTAACACACTCAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp ACATGCATGCTCACAAAATTACTCTGGGTGAGTGAAACCAACATGTaGACACACACCCATGAATTCGACAGAGCTGGGCAAGAAGAAAGC +
Preference number: 1 (lower is better)
Translates to: TCMLTKLLWVSETNM*THTHEFDRAGQEES
Trigger: GCTTTCTTCTTGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCACATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAGCATGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATaGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGA +
Preference number: 1 (lower is better)
Translates to: FANSPIKFGPQYDIL*GTATVSPFSNCHSR
Trigger: TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TTAGAGTTGATTGATATACTGGATTGGGATGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAGGAAACTCAG +
Preference number: 1 (lower is better)
Translates to: LELIDILDWDGEDEN*KRTAPASASEEETQ
Trigger: CTGAGTTTCCTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCCATCCCAATCCAGTATATCAATCAACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp TTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: FDSWCFNQTFSFWCC*ATVVCKFSNQVWAS
Trigger: TGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AAAGAAACGTATGCATATATGATCAGTAAGCAGCTCACATCTTTCTaGATGTCAAGGTCTACAGGATTGTCTCTGTCCACCTTTGGTCAA +
Preference number: 1 (lower is better)
Translates to: KETYAYMISKQLTSF*MSRSTGLSLSTFGQ
Trigger: TTGACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGATCATATATGCATACGTTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 90 bp AAAAGAAGAAAACAACGCAGCTCCTGTTGTATACATAAGGTAATGTaGAAAGCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGA +
Preference number: 1 (lower is better)
Translates to: KRRKQRSSCCIHKVM*KAHMWTLLCVSEHR
Trigger: TCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGCTTTTCACATTACCTTATGTATACAACAGGAGCTGCGTTGTTTTCTTCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 90 bp CAACATAGTTGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTaGTATCACTGCAAATCTCAAGTCCCAAATAATCTCTTTTTCTGG +
Preference number: 1 (lower is better)
Translates to: QHSWVVPLKYIIAIS*YHCKSQVPNNLFFW
Trigger: CCAGAAAAAGAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCAACTATGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 90 bp TGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAATAATCTCTTTTTCTGGATAGAAAGT +
Preference number: 1 (lower is better)
Translates to: WVVPLKYIIAISWYH*KSQVPNNLFFWIES
Trigger: ACTTTCTATCCAGAAAAAGAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp CAGGAACCAGGTTGCCCCACAACCCATCCCTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGGGGCCCACTCTGCATTATGGTTTCC +
Preference number: 2 (lower is better)
Translates to: QEPGCPTTHPSSWSL*LGNGVGGPLCIMVS
Trigger: GGAAACCATAATGCAGAGTGGGCCCCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGTTGTGGGGCAACCTGGTTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAACAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAALWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGCACCAGGGAAGCCTaGCATATATACAATCCCCTT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGTREA*HIYNPL
Trigger: AAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAALPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTCTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAAQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp TTATGGTTTCCAATGACCCCTCCCCAGAGCAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGGTGCTTTCTGGCAATGCATTTCTGC +
Preference number: 2 (lower is better)
Translates to: LWFPMTPPQSRALLC*QIGGYWCFLAMHFC
Trigger: GCAGAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGGGGTCATTGGAAACCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 2 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: MFPNVALYIGTREACHIYRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: NTKPFKKGGCEITATPWTQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp TTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTC +
Preference number: 2 (lower is better)
Translates to: LVLLSDGSLQILQSS*GLNMTSYGAPPLSV
Trigger: GACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp GAAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGTAGCGGAGTAGATGCTAGAGCCCAT +
Preference number: 2 (lower is better)
Translates to: EKELLQPLPQKRKLS*EMTELGSGVDARAH
Trigger: ATGGGCTCTAGCATCTACTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAASETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 2 (lower is better)
Translates to: MFPNVALYIGTREACHIYTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 2 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELSRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: NQTCYGKQKELREGFLSFITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTIGGYW*FLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTAT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 2 (lower is better)
Translates to: WNKQEATETPKAKLQTAVYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 2 (lower is better)
Translates to: QSICKAYLPPPPTASWAACNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 2 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: VALYIGTREACHIYNPLPPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 2 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 2 (lower is better)
Translates to: LNILIAKSFASQVPVNSRHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAATGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 2 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQCISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 2 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 2 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 90 bp AGGTGGTTAATAAAAACTGAGATTGCTTCAGAGGACACAGGAGGGTaGATGAGACAGTCTATTTTCCTTCCACCATCTTCCATGAGAGTC +
Preference number: 2 (lower is better)
Translates to: RWLIKTEIASEDTGG*MRQSIFLPPSSMRV
Trigger: GACTCTCATGGAAGATGGTGGAAGGAAAATAGACTGTCTCATCAACCCTCCTGTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 2 (lower is better)
Translates to: LNILIAKSFASQVPVNSRNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 2 (lower is better)
Translates to: SVFRNIEISTPCFLASVTSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 2 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 2 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: EPDLLWEAERVKGRFPFISQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 2 (lower is better)
Translates to: SVFRNIEISTPCFLASVTPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR TCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 2 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: QSICKAYLPPPPTASWAASSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp CCACCATCTTCCATGAGAGTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGGTCACCTGTCTCTTCC +
Preference number: 3 (lower is better)
Translates to: PPSSMRVRKRVL*APNLERSPVSS
Trigger: GGAAGAGACAGGTGACCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCTGACTCTCATGGAAGATGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp AGTGATGCAGAGTATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGGGGAGCAGGTAGGGAT +
Preference number: 3 (lower is better)
Translates to: SDAEYMTKECSE*CWQQERGAGRD
Trigger: ATCCCTACCTGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTCATATACTCTGCATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp CCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTC +
Preference number: 3 (lower is better)
Translates to: PVLGGEQEPDLL*EAERVKGRFPF
Trigger: GAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 3 (lower is better)
Translates to: QSICKAYLPPPPTASWAARPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TTCGAATCTAGTGTTGCAGAGCCTGAGGGACTCTCGTaGGATGCTCTGACCTCCACATCCCACCTCATCCTT +
Preference number: 3 (lower is better)
Translates to: FESSVAEPEGLS*DALTSTSHLIL
Trigger: AAGGATGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCCTCAGGCTCTGCAACACTAGATTCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CACAAGCATGTGGCACTTAGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACACGACACAGCTTTTCA +
Preference number: 3 (lower is better)
Translates to: HKHVALSAPTHT*SVSQGTRHSFS
Trigger: TGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGCTAAGTGCCACATGCTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 3 (lower is better)
Translates to: SNTKPFKKGGCEITATPWWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp CATCCTTCCTCTGTGGTTCCCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACACCTTTCCATGAAGGA +
Preference number: 3 (lower is better)
Translates to: HPSSVVPSLILP*ATSAPTPFHEG
Trigger: TCCTTCATGGAAAGGTGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACTGGGAACCACAGAGGAAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGTTTAGCCTCACTCTaGATCTTTGAGTCACACACA +
Preference number: 3 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSLASL*IFESHT
Trigger: TGTGTGTGACTCAAAGATCAAGAGTGAGGCTAAACT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTaGCATATATACAATCCCCTTCCTAGGGTGAACAAG +
Preference number: 3 (lower is better)
Translates to: PNVALYIGTREA*HIYNPLPRVNK
Trigger: CTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp GCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCATTTGCTAAACATGTTA +
Preference number: 3 (lower is better)
Translates to: ASNQARAGLICS*PPCQSHLLNML
Trigger: TAACATGTTTAGCAAATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp ACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAGCTGGTCTCATCTGCT +
Preference number: 3 (lower is better)
Translates to: TETPKAKLQTAV*LPTKQELVSSA
Trigger: AGCAGATGAGACCAGCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp ATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTCCAACCAAGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: ISKKPLRHQRLN*KLQCGFQPSKS
Trigger: GCTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp AGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTCTGCAAGGTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: RALLCLQIGGYW*FLAMHFCKVQF
Trigger: AAACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATaGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGC +
Preference number: 3 (lower is better)
Translates to: SPIKFGPQYDIL*GTATVSPFSNC
Trigger: GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 3 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 3 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 3 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 3 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp GTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGCCACTGTCAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: VCKFSNQVWASI*HPMGHRHCQSF
Trigger: AAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp ACAAACTCTCCCTCATCTAACTCACGTCGGGAATCATaGTGTGGTTTCATATGCACGCACGTGTTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: TNSPSSNSRRES*CGFICTHVLGK
Trigger: TTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACTGTTGGCTGGCCCGAC +
Preference number: 3 (lower is better)
Translates to: YSVFRNIEISTP*FLASVTVGWPD
Trigger: GTCGGGCCAGCCAACAGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp CTCACAAAATTACTCTGGGTGAGTGAAACCAACATGTaGACACACACCCATGAATTCGACAGAGCTGGGCAA +
Preference number: 3 (lower is better)
Translates to: LTKLLWVSETNM*THTHEFDRAGQ
Trigger: TTGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCACATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp AATGTCAAGGTCTACAGGATTGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGTGACTCATGGGAACTG +
Preference number: 3 (lower is better)
Translates to: NVKVYRIVSVHL*SMGSGSDSWEL
Trigger: CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 3 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 3 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp GGGAAGCCTGCCATATATACAATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTGAGTGTGTTAATAACT +
Preference number: 3 (lower is better)
Translates to: GKPAIYTIPFLG*TSSTSLSVLIT
Trigger: AGTTATTAACACACTCAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGATTGTATATATGGCAGGCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp ATTGATATACTGGATTGGGATGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCCTCTGCCTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: IDILDWDGEDEN*KRTAPASASEE
Trigger: CTCTTCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp GGGAATCATGATGTGGTTTCATATGCACGCACGTGTTaGGGAAACCCTAGGCTCATATTCGAATCTAGTGTT +
Preference number: 3 (lower is better)
Translates to: GNHDVVSYARTC*GNPRLIFESSV
Trigger: AACACTAGATTCGAATATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATATGAAACCACATCATGATTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: WNKQEATETPKAKLQTAVQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: NQTCYGKQKELREGFLSFILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATTGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp GACAATTTAGATTCCTTAGGTAAGAGCACAGGAGGATaGTATAGAACAGTGACTGTTCATTCCATCCCCCAA +
Preference number: 3 (lower is better)
Translates to: DNLDSLGKSTGG*YRTVTVHSIPQ
Trigger: TTGGGGGATGGAATGAACAGTCACTGTTCTATAGCATCCTCCTGTGCTCTTACCTAAGGAATCTAAATTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp ACTGGTGTCAGAGAGACAGCTTGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTTCAGAGCTTTTGTTCT +
Preference number: 3 (lower is better)
Translates to: TGVRETACNPNI*CQQEELQSFCS
Trigger: AGAACAAAAGCTCTGAAGTTCTTCCTGCTGGCACCAAATATTAGGATTACAAGCTGTCTCTCTGACACCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 3 (lower is better)
Translates to: LNILIAKSFASQVPVNSRFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 3 (lower is better)
Translates to: WNKQEATETPKAKLQTAVRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TATGCATATATGATCAGTAAGCAGCTCACATCTTTCTaGATGTCAAGGTCTACAGGATTGTCTCTGTCCACC +
Preference number: 3 (lower is better)
Translates to: YAYMISKQLTSF*MSRSTGLSLST
Trigger: GGTGGACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGATCATATATGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 3 (lower is better)
Translates to: LNILIAKSFASQVPVNSRILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTCATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 3 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp GAACATTTCATAACTAACCCCAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGTTTCCCAATGCTCTTC +
Preference number: 3 (lower is better)
Translates to: EHFITNPKPKCR*IASCASFPMLF
Trigger: GAAGAGCATTGGGAAACTTGCACAGCTAGCTATGCATCTACATTTTGGTTTGGGGTTAGTTATGAAATGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR GCA 72 bp TTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTaGACTCTTAGGAGAAACACTTTTGGGAATAATTTT +
Preference number: 3 (lower is better)
Translates to: FGQWVQEVTHGN*TLRRNTFGNNF
Trigger: AAAATTATTCCCAAAAGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 3 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATTCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHSKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp AAGATACAAGGAAAGCAGGGTTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTTATCACTGCAATCTTA +
Preference number: 3 (lower is better)
Translates to: KIQGKQGFISGS*FRVQFFITAIL
Trigger: TAAGATTGCAGTGATAAAGAACTGAACCCTAAATCAGCTCCCACTAATGAAACCCTGCTTTCCTTGTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 3 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CCA 72 bp TGGGTAGTTCCCTTAAAGTACATCATTGCTATAAGTTaGTATCACTGCAAATCTCAAGTCCCAAATAATCTC +
Preference number: 3 (lower is better)
Translates to: WVVPLKYIIAIS*YHCKSQVPNNL
Trigger: GAGATTATTTGGGACTTGAGATTTGCAGTGATACCAACTTATAGCAATGATGTACTTTAAGGGAACTACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR TCA 72 bp TTTCTGGCAATGCATTTCTGCAAGGTGCAGTTTAAATaGACTCATATGGTACTTGATATGGAAAGAAGCTTT +
Preference number: 3 (lower is better)
Translates to: FLAMHFCKVQFK*THMVLDMERSF
Trigger: AAAGCTTCTTTCCATATCAAGTACCATATGAGTTCATTTAAACTGCACCTTGCAGAAATGCATTGCCAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAECTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCCCGAGGGAGGGGTGTaGCACCGGTGGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQPEGGV*HRWVCH
Trigger: GTGGCACACCCACCGGTGGCACACCCCTCCCTCGGG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAERAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAENDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCACTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAALAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAACLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCACGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHECHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCCGAGGGAGGGGTGTaGCACCGGTGGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPEGGV*HRWVCH
Trigger: GTGGCACACCCACCGGTGGCACACCCCTCCCTCGGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGAAACCAGCCCCGTGTaGGGCGGGCAGGCACGCTCT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAETSPV*GGQARS
Trigger: AGAGCGTGCCTGCCCGCCGCACACGGGGCTGGTTTC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAGAACGCCGAATGTTTaGCAGCCGCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAERTPNV*QPQLFL
Trigger: GAGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCACGCCTATGAGCGGTaGAGGAGGTCCCAGAGACCC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNHAYER*RRSQRP
Trigger: GGGTCTCTGGGACCTCCTTCACCGCTCATAGGCGTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACCTCAGCCCGACAGACTaGGGCTCCCACCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYLSPTD*GSHLPG
Trigger: CCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAG...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR TCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAARKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSCHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTCTGTGGGCTGAACTaGACCCGAGGGAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVCGLN*TRGRGV
Trigger: CACACCCCTCCCTCGGGTCCAGTTCAGCCCACAGAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000649363.1
CDS-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHERAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGAGAGGCTGGGGCCCTaGCTCTCCTCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSERLGP*LSSQES
Trigger: AGACTCCTGGGAGGAGAGCCAGGGCCCCAGCCTCTC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGAGAGGCTGGGGCCCTaGCTCTCCTCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRERLGP*LSSQES
Trigger: AGACTCCTGGGAGGAGAGCCAGGGCCCCAGCCTCTC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 72 bp CCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTCCAGCTGGAGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PTHSIWQLAGTR*PHNPSLQLEPF
Trigger: AAAAGGCTCCAGCTGGAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCATAGTGGCACGCCTATaGGCGGTGAAGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFIVARL*AVKEVP
Trigger: TGGGACCTCCTTCACCGCTCATAGGCGTGCCACTAT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAECHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLICTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGACCCAAGGAGCGGTaGTGCCCCACAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGPKER*CPTILS
Trigger: AGAGAGAATTGTGGGGCAGCACCGCTCCTTGGGTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000649363.1
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTGCCACCGGTGGGTGTaGCACAGCCAGCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTCHRWV*HSQRRK
Trigger: CTTCCTGCGCTGGCTGTGGCACACCCACCGGTGGCA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTACGGAGACCGTCCTGTaGGTCGAATCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFTETVL*VESDFW
Trigger: CCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGGACTTGCTCTGGGCTaGCAAGGCAGCTGCATCATG +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVGLALG*QGSCIM
Trigger: CATGATGCAGCTGCCTTGGCAGCCCAGAGCAAGTCC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCACACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPHQRLN*KLQCGF
Trigger: GAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTG...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSDTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGCCACCACCTCCCACTaGTTCCTGGGCCGCAAACAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARATTSH*FLGRKQ
Trigger: CTGTTTGCGGCCCAGGAAGCAGTGGGAGGTGGTGGC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAACATACACGCCCACGTaGGCAGTAGTCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGTYTPT*AVVLGT
Trigger: TGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: APVLGGEQEPDLLWEAERPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCCCAAGGAGCGGTGCTaGCCCACAATTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVPKERC*PTILSV
Trigger: AACAGAGAGAATTGTGGGGCAGCACCGCTCCTTGGG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCCCAAGGAGCGGTGCTaGCCCACAATTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSPKERC*PTILSV
Trigger: AACAGAGAGAATTGTGGGGCAGCACCGCTCCTTGGG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGACACCCAGGCATTGTaGCAAGGCTGCCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIADTQAL*QGCHCR
Trigger: CCTGCAATGGCAGCCTTGGCACAATGCCTGGGTGTC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGTAGGGGGCCCACTCTaGATTATGGTTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFVGGPL*IMVSND
Trigger: GTCATTGGAAACCATAATGCAGAGTGGGCCCCCTAC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGGCTAAGGCAACGTaGATCCCTCTAGAGACGCAC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSAKAT*IPLETH
Trigger: GTGCGTCTCTAGAGGGATGCACGTTGCCTTAGCCGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAICLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGGGGTGTGCCACCGGTaGGTGTGCCACAGCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRGVCHR*VCHSQR
Trigger: GCGCTGGCTGTGGCACACCCACCGGTGGCACACCCC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAACTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARVPWLC*AENSSR
Trigger: CCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAAC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSEEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGACCCAAGGAGCGGTaGTGCCCCACAATTCTCTCT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGPKER*CPTILS
Trigger: AGAGAGAATTGTGGGGCAGCACCGCTCCTTGGGTCC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCCCAAGTGCCACTaGTTATCCAGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIHPKCH*LSSASS
Trigger: GCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTASGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHETSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHESVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTAATGTTTGTCACCTaGCTCAGGCCAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVMFVT*LRPGFL
Trigger: AAGGAACCCTGGCCTGAGGCAGGTGACAAACATTAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGGCTGCCAAGGCAGCTaGATCATGCTGTTTGTAGAT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGGCQGS*IMLFVD
Trigger: ATCTACAAACAGCATGATGCAGCTGCCTTGGCAGCC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGAGCTGGTCTCATCTaGTCATGGCCACCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRAGLI*SWPPCQ
Trigger: CTGACAGGGTGGCCATGAGCAGATGAGACCAGCTCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTGCCAAGGCTGCCATTaGAGGAGGGCACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARCQGCH*RRAQRE
Trigger: CTCTCTCTGTGCCCTCCTGCAATGGCAGCCTTGGCA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGCATTGTGCCAAGGCTaGCATTGCAGGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARALCQG*HCRRAQ
Trigger: CTGTGCCCTCCTGCAATGGCAGCCTTGGCACAATGC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQSRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAARDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000649363.1
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSRLPPA*VTYQAS
Trigger: AGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCT...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCATCTGGGAGTGTCTaGAAATCTCGCACTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPSGSV*KSRTPP
Trigger: CGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCATCACTGCCACCCCATaGACAGACCCCTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCITATP*TDPSLF
Trigger: GAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGAT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAASSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTTCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACACTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAATTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACGCCCACTCTGCATTATaGTTTCCAATGACCCCTCCC +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHAHSAL*FPMTPP
Trigger: GGGAGGGGTCATTGGAAACCATAATGCAGAGTGGGC...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATGCAGTGAGTGCTGCTaGCAACAGGAGCGGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSCSECC*QQERGA
Trigger: TGCTCCCCGCTCCTGTTGCCAGCAGCACTCACTGCA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGATTTCCAAGCAATaGGAAATGGGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEWISKQ*EMGSGD
Trigger: GTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTGGATTTCCAAGCAATaGGAAATGGGGAGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSWISKQ*EMGSGD
Trigger: GTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAILALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCACTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCACCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCTGATCCTTCCATaGGCTACATCAGCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVSLILP*ATSAPT
Trigger: TGTTGGCGCTGATGTAGCTCATGGAAGGATCAGACT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLRVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPRVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGEDEN*KRTAPA
Trigger: GGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTTCCACCATCTTCCATaGGAGTCAGGAAAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQFHHLP*ESGKGF
Trigger: GAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVNGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIARSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTATSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGC +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTTEAPT*LGYISG
Trigger: GCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTAATGTTTGTCACCTaGCTCAGGCCAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVMFVT*LRPGFL
Trigger: AAGGAACCCTGGCCTGAGGCAGGTGACAAACATTAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIANHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGGGACTCTCGTGAGATaGTCTGACCTCCACATCCCA +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTGTLVR*SDLHIP
Trigger: TGGGATGTGGAGGTCAGAGCATCTCACGAGAGTCCC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGGTGCTTTCTGGCAATaGATTTCTGCAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQGAFWQ*ISARCS
Trigger: ACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHESRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGATGTCCTGGTAGGCTaGCTTGGGTTTTTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDDVLVG*LGFLLK
Trigger: CTTCAACAAAAACCCAAGGCAGCCTACCAGGACATC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAACATACACGCCCACGTaGGCAGTAGTCCTTGGGACA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSTYTPT*AVVLGT
Trigger: TGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGGGGAGAGCGGGACGTaGTTGGAGTGTAGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLGESGT*LECSCG
Trigger: GCCACAGCTACACTCCAACCACGTCCCGCTCTCCCC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTGGGAGTTCCGGCCGCTaGACGGCTCATTGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVGSSGR*TAHCQV
Trigger: GACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCCC...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGGCATGTGGCCATCTaGGAGTGTCTGGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRHVAI*ECLEIS
Trigger: CGAGATTTCCAGACACTCCCAGATGGCCACATGCCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCCTCCCAGGAGTCTGTaGGCTGAACTGGACCCGAGG +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGPPRSL*AELDPR
Trigger: CCTCGGGTCCAGTTCAGCCCACAGACTCCTGGGAGG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPSGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGATAGTGGCACGCCTATaGGCGGTGAAGGAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWIVARL*AVKEVP
Trigger: TGGGACCTCCTTCACCGCTCATAGGCGTGCCACTAT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCAGAGATACAGCAAATaGGTGATAGTGGCACGCCTA +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLQRYSK*VIVARL
Trigger: TAGGCGTGCCACTATCACTCATTTGCTGTATCTCTG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGG +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLCTQGS*WSPGSW
Trigger: CCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGTTTGGGCCTCAATATaGCATCCTATGGGGCACCGC +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCVWASI*HPMGHR
Trigger: GCGGTGCCCCATAGGATGTCATATTGAGGCCCAAAC...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCTGCCAGGGCACGGCTaGGTAACACGAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTLPGHG*VTRSHS
Trigger: TGAATGGCTTCGTGTTACTCAGCCGTGCCCTGGCAG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELEEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGAGGAGTTTCCTGAGTaGCTCTGGCTCCTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTREEFPE*LWLLPH
Trigger: ATGAGGAAGGAGCCAGAGTCACTCAGGAAACTCCTC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCAGGAAAAGGGTTCTGTaGGCACCCAACCTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFRKRVL*APNLER
Trigger: CCGCTCCAGGTTGGGTGCTCACAGAACCCTTTTCCT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIANGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAAGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQVMQSI*QRSAVS
Trigger: ACTCACTGCACTCCTTTGTCATATACTCTGCATCAC...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGGACTTGCTCTGGGCTaGCAAGGCAGCATGCTGTTT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVGLALG*QGSMLF
Trigger: AAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACTCGCTGGGGTCTGGTaGCTGGGCTGCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRLAGVW*LGCWEL
Trigger: AAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACTCATTGTCTACTTTTaGCCGCAGCTTTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRLIVYF*PQLFLG
Trigger: ACCGAGGAAAAGCTGCGGGCAAAAGTAGACAATGAG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369253.6
ENST00000369266.7
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCACGGAGACCGTCCTGTaGGTCGAATCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTTETVL*VESDFW
Trigger: CCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATCTCCACCAGCCAAGTaGTGGGACCCAGGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRSPPAK*WDPGGH
Trigger: GTGGCCACCTGGGTCCCAGCACTTGGCTGGTGGAGA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGTGCTTTCTGGCAATaGATTTCTGCAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSGAFWQ*ISARCS
Trigger: ACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTATGCAAAGCATATCTaGCACCACCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPYAKHI*HHLPLL
Trigger: AAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCAAGGAGTGCAGTGAGTaGTGCTGGCAACAGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFKECSE*CWQQER
Trigger: CCGCTCCTGTTGCCAGCAGCACTCACTGCACTCCTT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCCAAGCAATGAGAAATaGGGAGTGGGGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHPSNEK*GVGTQG
Trigger: TCCTTGGGTCCCCACTCCCCATTTCTCATTGCTTGG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHERDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTCLAGV*CLGCWE
Trigger: TTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
CDS-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDEPDLL*EAERVK
Trigger: CTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGAGAGGCTGGGGCCCTaGCTCTCCTCCCAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHERLGP*LSSQES
Trigger: AGACTCCTGGGAGGAGAGCCAGGGCCCCAGCCTCTC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSSSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATCTTCACTAGGCATCTaGCACACAGAAAGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSSLGI*HTERLQ
Trigger: TTGCAGCCTTTCTGTGTGCCAGATGCCTAGTGAAGA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATAGAACGCCGAATGTTTaGCAGCCGCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHRTPNV*QPQLFL
Trigger: GAGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCT...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTATGCACGCACGTGTTaGGGAAACCCTAGGCTCATA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAYARTC*GNPRLI
Trigger: TATGAGCCTAGGGTTTCCCCAACACGTGCGTGCATA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCAGTGGCTTACCCTCCTaGGTGTGGAGTTACACAAAC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTASGLPS*VWSYTN
Trigger: GTTTGTGTAACTCCACACCCAGGAGGGTAAGCCACT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCTACACACAAGCATGTaGCACTTAGCGCGCCAACAC +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELLHTSM*HLARQH
Trigger: GTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTACACACAAGCATGTaGCACTTAGCGCGCCAACAC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRLHTSM*HLARQH
Trigger: GTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 72 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCCTATGGGGCACCGCCA +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSS*GLNMTSYGAPP
Trigger: TGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCTCTCAGATGAGGTaGCTTTGCTTTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNFSQMR*LCFSQS
Trigger: GCTCTGAGAAAAGCAAAGTCACCTCATCTGAGAGAA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATTCTCTCAGATGAGGTaGCTTTGCTTTTCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRFSQMR*LCFSQS
Trigger: GCTCTGAGAAAAGCAAAGTCACCTCATCTGAGAGAA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCAGAGATACAGCAAATaGGTGATAGTGGCACGCCTA +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIQRYSK*VIVARL
Trigger: TAGGCGTGCCACTATCACTCATTTGCTGTATCTCTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMNDRLL*WVVRVL
Trigger: CAGGACCCTCACCACCCATCAGAGAAGCCTGTCATT...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHECHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSLWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTCTCGTGAGATGCTCTaGCCTCCACATCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWSREML*PPHPTS
Trigger: TGAGGTGGGATGTGGAGGTCAGAGCATCTCACGAGA...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTSRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIDAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGATGCTATAGAACAGTaGCTGTTCATTCCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIADAIEQ*LFIPSP
Trigger: GGGGGATGGAATGAACAGTCACTGTTCTATAGCATC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCATTTAGCAAAACTACCTaGTTATGCCCATGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAFSKTT*LCPCFP
Trigger: TGGGAAACATGGGCATAATCAGGTAGTTTTGCTAAA...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQGEDEN*KRTAPA
Trigger: GGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGTGGTTAATAAAAACTaGGATTGCTTCAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAVVNKN*DCFRGH
Trigger: GTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCAC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGCTTTGGGGCATACTaGCAAACACTTCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSFGAY*QTLHWL
Trigger: TAACCAATGAAGTGTTTGTCAGTATGCCCCAAAGCT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSNGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCAGGAACCACACACATaGTTGGACAAGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPQEPHT*LDKSVH
Trigger: ATGTACAGACTTGTCCAATCATGTGTGTGGTTCCTG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCAGGAACCACACACATaGTTGGACAAGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHQEPHT*LDKSVH
Trigger: ATGTACAGACTTGTCCAATCATGTGTGTGGTTCCTG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCAGGAACCACACACATaGTTGGACAAGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLQEPHT*LDKSVH
Trigger: ATGTACAGACTTGTCCAATCATGTGTGTGGTTCCTG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCCTTGGGTTTTTGTTaGAGTTCACTAGACAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVALGFC*SSLDKV
Trigger: CACCTTGTCTAGTGAACTTCAACAAAAACCCAAGGC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR GCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATGCTTTTCTCAGAGCTaGACAATTTCCCCAGACACT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLCFSQS*TISPDT
Trigger: AGTGTCTGGGGAAATTGTGCAGCTCTGAGAAAAGCA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGGGATGGTAGGTCTTaGCCAGAGCAGTCACCACTT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVWDGRS*PEQSPL
Trigger: AAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGCAGCCGGCACAATTaGTGGAGAAGGTGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNRSRHN*WRRWFL
Trigger: AAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCG...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNLKHPK*HCLSSA
Trigger: GGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCCCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVPGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGG...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTTCAGGTCTGTGGAAATaGTGGGGAGAGCGGGACGTG +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLSGLWK*WGERDV
Trigger: CACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGA...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCCACGTGTCAGAGGCTaGAACACAGACTCAGAAACT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQPRVRG*NTDSET
Trigger: AGTTTCTGAGTCTGTGTTGCAGCCTCTGACACGTGG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCAGTTCTTTATCACTaGAATCTTAGGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSVLYH*NLRQAP
Trigger: AGGGGCCTGCCTAAGATTGCAGTGATAAAGAACTGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTC +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVIGGYW*FLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTAT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGTAGGGGGCCCACTCTaGATTATGGTTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARVGGPL*IMVSND
Trigger: GTCATTGGAAACCATAATGCAGAGTGGGCCCCCTAC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGGGCACCAGGGAAGCCTaGCATATATACAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELGTREA*HIYNPL
Trigger: AAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCC...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGGCACCAGGGAAGCCTaGCATATATACAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSGTREA*HIYNPL
Trigger: AAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGAACTGAAAAAGAACTaGTCCAGCCTCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSELKKN*SSLCLR
Trigger: TCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTATGCAAAGCATATCTaGCACCACCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHYAKHI*HHLPLL
Trigger: AAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTATGCAAAGCATATCTaGCACCACCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIYAKHI*HHLPLL
Trigger: AAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGTGACTCATGGGAACTaGACTCTTAGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPVTHGN*TLRRNT
Trigger: AGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCAC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGAGTGCAGTGAGTGCTaGTGGCAACAGGAGCGGGGA +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRECSEC*WQQERG
Trigger: TCCCCGCTCCTGTTGCCAGCAGCACTCACTGCACTC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTATATGACAAAGGAGTaGAGTGAGTGCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLYMTKE*SECCWQ
Trigger: TTGCCAGCAGCACTCACTGCACTCCTTTGTCATATA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAAGGTACGACAACCTCTaGACACCAGGAGACAAAAGC +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSRYDNL*TPGDKS
Trigger: GCTTTTGTCTCCTGGTGTGCAGAGGTTGTCGTACCT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGGAAGGCAGGCATCTTaGCATGGATTTCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHGRQAS*HGFPSN
Trigger: ATTGCTTGGAAATCCATGCCAAGATGCCTGCCTTCC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGTGGGCAGTAGTCCTTaGGACAGAGATACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIVGSSP*DRDTAN
Trigger: ATTTGCTGTATCTCTGTCCCAAGGACTACTGCCCAC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTACAAGCAAAGCAATTaGGATGGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSYKQSN*DGRSCP
Trigger: TGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATACAAGCAAAGCAATTaGGATGGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLYKQSN*DGRSCP
Trigger: TGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRDSVSG*KRALAD
Trigger: ATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACTGGAGCCCTGGCTCGTaGACCGATGGATCATCCGAT +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHWSPGS*TDGSSD
Trigger: ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCA...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRRAGRG*SVAVAA
Trigger: AGCCGCCACAGCTACACTCCAACCACGTCCCGCTCT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGTCTGTGGAAATGCTaGGGAGAGCGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLGLWKC*GERDVV
Trigger: AACCACGTCCCGCTCTCCCCAGCATTTCCACAGACC...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPEPDLL*EAERVK
Trigger: CTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCGGTCTCATCTGCTCATaGCCACCCTGTCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCGLICS*PPCQSH
Trigger: ATGGCTCTGACAGGGTGGCCATGAGCAGATGAGACC...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCTACACACAAGCATGTaGCACTTAGCGCGCCAACAC +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCLHTSM*HLARQH
Trigger: GTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCTGGTAGGCTGCCTTaGGTTTTTGTTGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCPGRLP*VFVEVH
Trigger: GTGAACTTCAACAAAAACCCAAGGCAGCCTACCAGG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR TCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGCGCCTGCCCATTCTTaGTATCTCTTCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHAPAHS*YLFRSR
Trigger: CCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCGATAGTATGACCTGGTaGGCCAGGAATACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCDSMTW*ARNTGA
Trigger: GGCTCCAGTATTCCTGGCTCACCAGGTCATACTATC...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAILVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTAT +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVLALPR*HPHSCY
Trigger: ATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCCAGCCAGGTCCCGGTaGACAGTAGAGAACAAGGAG +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVPARSR*TVENKE
Trigger: CTCCTTGTTCTCTACTGTTCACCGGGACCTGGCTGG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGTGCACACACACCCATaGATTCGACAGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCVHTHP*IRQSWA
Trigger: TGCCCAGCTCTGTCGAATTCATGGGTGTGTGTGCAC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTSRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAGAGTAAAGCAAGGATaGGGACACCCAGGCATTGTG +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSRVKQG*GHPGIV
Trigger: CACAATGCCTGGGTGTCCTCATCCTTGCTTTACTCT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCATTATGGTTTCCAATaGCCCCTCCCCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCHYGFQ*PLPRAE
Trigger: CTCTGCTCTGGGGAGGGGTCATTGGAAACCATAATG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTTCCACCATCTTCCATaGGAGTCAGGAAAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQFHHLP*ESGKGF
Trigger: GAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTCCACCATCTTCCATaGGAGTCAGGAAAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHFHHLP*ESGKGF
Trigger: GAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGCTTTGGGGCATACTaGCAAACACTTCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPSFGAY*QTLHWL
Trigger: TAACCAATGAAGTGTTTGTCAGTATGCCCCAAAGCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGACAAAGGAGTGCAGTaGGTGCTGCTGGCAACAGGA +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCDKGVQ*VLLATG
Trigger: TCCTGTTGCCAGCAGCACTCACTGCACTCCTTTGTC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSREEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSGRHRL*TELTKA
Trigger: TGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCC...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTCTGGTTGCATCTGCTaGATCGTGCACAGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCSGCIC*IVHSWG
Trigger: ACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCGCTGGACGGCTCATTaGCAGGTCTGTGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLRWTAH*QVCGNA
Trigger: AGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGTCTGGTGCCTGGGCTaGTGGGAACTTGGAAAACTT +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLVWCLG*WELGKL
Trigger: AAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGAC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMSVHSH*RHVAIW
Trigger: CCAGATGGCCACATGCCTGCAATGAGAATGGACCGA...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCTCATTGTCTACTTTTaGCCGCAGCTTTTCCTCGGT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTLIVYF*PQLFLG
Trigger: ACCGAGGAAAAGCTGCGGGCAAAAGTAGACAATGAG...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369253.6
ENST00000369266.7
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATCCTAAGGGCACTTaGCAGCTCTTATCCGGACAG +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIHPKGT*QLLSGQ
Trigger: CTGTCCGGATAAGAGCTGGCAAGTGCCCTTAGGATG...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAGCAGGAACCAGACCTaGTATGGGAAGCAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSSRNQT*YGKQKE
Trigger: CTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCTCATGTACAGATTCTaGATCCCCTTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHLMYRF*IPFFSR
Trigger: TCGAGAGAAGAAGGGGATGCAGAATCTGTACATGAG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCACGGAGACCGTCCTGTaGGTCGAATCAGACTTTTGG +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFTETVL*VESDFW
Trigger: CCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHESETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPSETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHHQRLN*KLQCGF
Trigger: GAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACAGCAGAGCACTACTCTaGTTGCAGATAGGAGGCTAC +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNSRALL*LQIGGY
Trigger: GTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGTGCAAGTTTCCCAATaGTCTTCCTATCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQVQVSQ*SSYLLI
Trigger: TATTAGGAGATAGGAAGAGCATTGGGAAACTTGCAC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGCGCCAACACACACCTaGTCAGTTTCACAGGGAACA +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIAPTHT*SVSQGT
Trigger: TGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGGAAGGCAGGCATCTTaGCATGGATTTCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQGRQAS*HGFPSN
Trigger: ATTGCTTGGAAATCCATGCCAAGATGCCTGCCTTCC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATTCTGTTCGAGCCCCTaGCACTGGTTCTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTFCSSP*HWFSQM
Trigger: CATCTGAGAGAACCAGTGCCAGGGGCTCGAACAGAA...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFWFLSD*TTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SPIKFGPQYDILWGTATVHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGTCCGTCTCAATCTTTaGTGTCTCGCTGGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLVRLNL*CLAGVW
Trigger: CCAGACCCCAGCGAGACACCAAAGATTGAGACGGAC...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTGGGGGACCAGGCCAGTaGTCCGTCTCAATCTTTGGT +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVGGPGQ*SVSIFG
Trigger: ACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCC...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCG +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSRHVAI*ECLVIS
Trigger: CGAGATTACCAGACACTCCCAGATGGCCACATGCCT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
CDS-3UTR CCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAACTTCAGGGGCTAAGTaGCGCTCCAGCCTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRTSGAK*RSSLVL
Trigger: CAGAACCAGGCTGGAGCGCCACTTAGCCCCTGAAGT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGAGAACGCCGAATGTTTaGCAGCCGCAGCTTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWRTPNV*QPQLFL
Trigger: GAGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGCCACTGGGCCAATCTaGGGGCAATTTGTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCATGPI*GQFVFF
Trigger: GAAAAACACAAATTGCCCCCAGATTGGCCCAGTGGC...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGCTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCAGGTAAGGAAGCACTaGAAATGCACCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCQVRKH*KCTILS
Trigger: GGAGAGGATGGTGCATTTCCAGTGCTTCCTTACCTG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCACAAAAGAGCAAGCTTTaGGGCATACTGACAAACACT +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPQKSKL*GILTNT
Trigger: AGTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTG...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCCACCTTTGGTCAATaGGTTCAGGAAGTGACTCAT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISTFGQ*VQEVTH
Trigger: ATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: MFPNVALYIGTREACHIYVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCTACACACAAGCATGTaGCACTTAGCGCGCCAACAC +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSLHTSM*HLARQH
Trigger: GTGTTGGCGCGCTAAGTGCCACATGCTTGTGTGTAG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVGCAQS*QRQSLP
Trigger: TGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCC...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCCTGTGATAAACTGGTaGCACGCCTCACATTTCACC +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCPVINW*HASHFT
Trigger: GGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMLDDIF*GLALGC
Trigger: GCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAG...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTCTGTCCACCTCTCTaGGGATTTTGTTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLFCPPL*GFCFAL
Trigger: GAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAA...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACAAGAAAGGCGGGTGTaGAATCACTGCCACCCCATG +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRQERRV*NHCHPM
Trigger: CATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLCDEGP*AQSFPR
Trigger: CCTTGGAAATGACTGAGCTCACGGACCCTCATCACA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGATAAAAGAAATCGGATaGAGAACGCCGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEIKEIG*RTPNVW
Trigger: CCAAACATTCGGCGTTCTTCATCCGATTTCTTTTAT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCAAAATTACTCTGGGTaGGTGAAACCAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAQNYSG*VKPTCA
Trigger: TGCACATGTTGGTTTCACTCACCCAGAGTAATTTTG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCLWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTTAGCAAAACTACCTaGTTATGCCCATGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNFSKTT*LCPCFP
Trigger: TGGGAAACATGGGCATAATCAGGTAGTTTTGCTAAA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATCCCCTTCCTAGGGTaGACAAGCTCCACCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCIPFLG*TSSTSL
Trigger: CAAACTGGTGGAGCTTGTTCACCCTAGGAAGGGGAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGAACTCAGCTTGGAGATaGCAGAATTGGGTAGCGGAG +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMNSAWR*QNWVAE
Trigger: CTCCGCTACCCAATTCTGTCATCTCCAAGCTGAGTT...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGTGGTTAATAAAAACTaGGATTGCTTCAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LSNTKPFKKGGCEITATPVVNKN*DCFRGH
Trigger: GTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCAC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCAGCTTTGGGGCATACTaGCAAACACTTCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTASFGAY*QTLHWL
Trigger: TAACCAATGAAGTGTTTGTCAGTATGCCCCAAAGCT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTACATCTGGTTGCATCTaGTGCATCGTGCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCTSGCI*CIVHSW
Trigger: CCAGCTGTGCACGATGCAGCAGATGCAACCAGATGT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNSVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTCGGTCTTCGTAGATTaGTTACAGTCGGGATGCCAA +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAISVFVD*LQSGCQ
Trigger: TTGGCATCCCGACTGTAAGCAATCTACGAAGACCGA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCGTAATGTTTGTCACCTaGCTCAGGCCAGGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCVMFVT*LRPGFL
Trigger: AAGGAACCCTGGCCTGAGGCAGGTGACAAACATTAC...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTTCCTAGGATTTTCCTaGATTCTGCACAATCCAGAA +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVFLGFS*ILHNPE
Trigger: TTCTGGATTGTGCAGAATGCAGGAAAATCCTAGGAA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTCTAAAGAGACCCCTTaGAAAAGCACATCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHSKETP*KSTSAQ
Trigger: TTGAGCTGATGTGCTTTTGCAAGGGGTCTCTTTAGA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTCTAAAGAGACCCCTTaGAAAAGCACATCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTSKETP*KSTSAQ
Trigger: TTGAGCTGATGTGCTTTTGCAAGGGGTCTCTTTAGA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCSETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGTTCTTTATCACTaGAATCTTAGGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHSVLYH*NLRQAP
Trigger: AGGGGCCTGCCTAAGATTGCAGTGATAAAGAACTGA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRIGGYW*FLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTAT...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGTAGGGGGCCCACTCTaGATTATGGTTTCCAATGAC +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTVGGPL*IMVSND
Trigger: GTCATTGGAAACCATAATGCAGAGTGGGCCCCCTAC...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGCCCCTTTTACTTCATaGCATCATTATGCACTTAAG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPAPFTS*HHYALK
Trigger: CTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWKPKCR*IASCAS
Trigger: ACTTGCACAGCTAGCTATGCATCTACATTTTGGTTT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGAACTGAAAAAGAACTaGTCCAGCCTCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNELKKN*SSLCLR
Trigger: TCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTATGCAAAGCATATCTaGCACCACCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTYAKHI*HHLPLL
Trigger: AAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGTGACTCATGGGAACTaGACTCTTAGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQVTHGN*TLRRNT
Trigger: AGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCAC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCCAAGCAATGAGAAATaGGGAGTGGGGACCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGPSNEK*GVGTQG
Trigger: TCCTTGGGTCCCCACTCCCCATTTCTCATTGCTTGG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGTGGGCAGTAGTCCTTaGGACAGAGATACAGCAAAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNVGSSP*DRDTAN
Trigger: ATTTGCTGTATCTCTGTCCCAAGGACTACTGCCCAC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000277895.9
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTTACAAGCAAAGCAATTaGGATGGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATYKQSN*DGRSCP
Trigger: TGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTA...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCCTTCTGTGAACATCTaGTTGCATCTGCTGCATCGT +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIPSVNI*LHLLHR
Trigger: ACGATGCAGCAGATGCAACCAGATGTTCACAGAAGG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCGATCCCGAACATCCTaGTACCCTTCTGCTGATGGA +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLRSRTS*YPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGGCTCGTGGACCGATaGATCATCCGATCCCGAACA +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVWLVDR*IIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATC +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHELMEP*LVDRWI
Trigger: GATCCATCGGTCCACGAGCCAGGGCTCCATCAACTC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: VALYIGTREACHIYNPLPLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QSICKAYLPPPPTASWAAIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTAGGCATGTGGCCATCTaGGAGTGTCTGGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLRHVAI*ECLEIS
Trigger: CGAGATTTCCAGACACTCCCAGATGGCCACATGCCT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHEPDLL*EAERVK
Trigger: CTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTCACAAAATTACTCTaGGTGAGTGAAACCAACATG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLTKLL*VSETNM
Trigger: CATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTTACCCTCCTGGGTGTaGAGTTACACAAACTCTCCC +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSLPSWV*SYTNSP
Trigger: GGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCCCACACATTCAATCTaGCAGTTAGCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTPTHSI*QLAGTR
Trigger: CCTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAATTGATATACTGGATTaGGATGGAGAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTIDILD*DGEDEN
Trigger: GTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCAAAAGAGCAAGCTTTaGGGCATACTGACAAACACT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAQKSKL*GILTNT
Trigger: AGTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCCTCCCACTGCTTCCTaGGCCGCAAACAGAAAAATA +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCPPTAS*AANRKI
Trigger: TATTTTTCTGTTTGCGGCCCAGGAAGCAGTGGGAGG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACACAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR TCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTTATGTGAAGCTGAGTTaGTGGGAGAATCGTAGCGAC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIYVKLS*WENRSD
Trigger: GTCGCTACGATTCTCCCATCAACTCAGCTTCACATA...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCAGCATGGGCTTGATCTaGTTCATAGGATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSSMGLI*FIGCQR
Trigger: TCTCTGGCATCCTATGAATCAGATCAAGCCCATGCT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACAAAATTACTCTGGGTaGGTGAAACCAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRQNYSG*VKPTCA
Trigger: TGCACATGTTGGTTTCACTCACCCAGAGTAATTTTG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCTCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTSRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTTAACTCTATCTCTTTaGGGTTTTGGAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSLTLSL*GFGEQE
Trigger: TTCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAAACGTATGCATATATaGTCAGTAAGCAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPKRMHI*SVSSSH
Trigger: ATGTGAGCTGCTTACTGATCATATATGCATACGTTT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACAC +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVEEAPL*QVTATH
Trigger: GTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTC...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGTAATGTTTGTCACCTaGCTCCAGGACTTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIVMFVT*LQDFPC
Trigger: ACAGGGAAAGTCCTGGAGGCAGGTGACAAACATTAC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGCATCTGCTGCATCGTaGACAGCTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHASAAS*TAGVVM
Trigger: CATTACCACCCCAGCTGTGCACGATGCAGCAGATGC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: GPQYDILWGTATVSPFSNLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR GCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSNRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTAACCGATTTTTCCCATaGGGCATCCTAAGGGCACTT +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFINRFFP*GILRAL
Trigger: AAGTGCCCTTAGGATGCCGCATGGGAAAAATCGGTT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTAATCACCTAATGGCATaGCACTGGGCCAATCTGGGG +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVNHLMA*HWANLG
Trigger: CCCCAGATTGGCCCAGTGGCATGCCATTAGGTGATT...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTCACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLHQRLN*KLQCGF
Trigger: GAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTG...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCGCGCCAACACACACCTGCTCAGTTTCACAGGGAACACGACACAGCTTTTCAATCTTCTCAAGTTGGATaGAGAACTGAGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: ARQHTPAQFHREHDTAFQSSQVG*RTEFKR
Trigger: TCTTTTAAACTCAGTTCTGCATCCAACTTGAGAAGA...TTGAAAAGCTGTGTCGTGTTCCCTGTGAAACTGAGCAGGTGTGTGTTGGCGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 4 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGCISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGGCACCAGGGAAGCCTaGCATATATACAATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGGTREA*HIYNPL
Trigger: AAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTGCAAGTTTCCCAATaGTCTTCCTATCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVQVSQ*SSYLLI
Trigger: TATTAGGAGATAGGAAGAGCATTGGGAAACTTGCAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTKPKCR*IASCAS
Trigger: ACTTGCACAGCTAGCTATGCATCTACATTTTGGTTT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAACTGAAAAAGAACTaGTCCAGCCTCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLELKKN*SSLCLR
Trigger: TCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGTGACTCATGGGAACTaGACTCTTAGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNVTHGN*TLRRNT
Trigger: AGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCAC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGACAATGGTTTCCTCTaGTGTAAAGAAACGTATGCA +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIADNGFL*CKETYA
Trigger: TGCATACGTTTCTTTACAGCAGAGGAAACCATTGTC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGCTCAGAGAGCTTCAATaGGGAGTCATCAGCAACTCG +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLLRELQ*GVISNS
Trigger: CGAGTTGCTGATGACTCCGCATTGAAGCTCTCTGAG...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTATATGACAAAGGAGTaGAGTGAGTGCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNYMTKE*SECCWQ
Trigger: TTGCCAGCAGCACTCACTGCACTCCTTTGTCATATA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTGGAAATGTTTGGTCTaGACCCGAAGCACTTCACCC +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCWKCLV*TRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAACTCCCCACAGCCATaGCAGCGTGTCCCGTACATC +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVNSPQP*QRVPYI
Trigger: GATGTACGGGACACGCTGCCATGGCTGTGGGGAGTT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTACAAGCAAAGCAATTaGGATGGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIYKQSN*DGRSCP
Trigger: TGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: DILWGTATVSPFSNCHSRVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIALFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHLIAGM*PSGSVW
Trigger: CCAGACACTCCCAGATGGCCACATGCCTGCAATGAG...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCAATATGACATCCTATaGGGCACCGCCACTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHQYDIL*GTATVS
Trigger: ACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNEPDLL*EAERVK
Trigger: CTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGAACCAGACCTGCTATaGGAAGCAGAAAGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTEPDLL*EAERVK
Trigger: CTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTTCTTTGCAAAGGTaGAGCTCCAGACAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLLSLQR*SSRQLL
Trigger: CAGGAGCTGTCTGGAGCTCCACCTTTGCAAAGAAAG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACTAATGGCATGCCACTaGGCCAATCTGGGGGCAATT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRLMACH*ANLGAI
Trigger: AATTGCCCCCAGATTGGCCCAGTGGCATGCCATTAG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTCACAAAATTACTCTaGGTGAGTGAAACCAACATG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLTKLL*VSETNM
Trigger: CATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTCTCACAAAATTACTCTaGGTGAGTGAAACCAACATG +
Preference number: 4 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLTKLL*VSETNM
Trigger: CATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAGCATGATAATAAAGTaGCTTACCCTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSSMIIK*LTLLGV
Trigger: CACACCCAGGAGGGTAAGCCACTTTATTATCATGCT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACAGCATGATAATAAAGTaGCTTACCCTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNSMIIK*LTLLGV
Trigger: CACACCCAGGAGGGTAAGCCACTTTATTATCATGCT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: FGPQYDILWGTATVSPFSCNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSCNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCAACCAAGCAAGAGCTaGTCTCATCTGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTQPSKS*SHLLMA
Trigger: GGCCATGAGCAGATGAGACCAGCTCTTGCTTGGTTG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGTGCTGGGACCCAGGTaGCCACCATTGTTATTGACA +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRVLGPR*PPLLLT
Trigger: TGTCAATAACAATGGTGGCCACCTGGGTCCCAGCAC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTATTGATATACTGGATTaGGATGGAGAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIIDILD*DGEDEN
Trigger: GTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCAAACGGTGGAGCCTTaGAGATACATTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHQTVEP*RYISSP
Trigger: AGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCTGGTACCCTTCTGCTaGTGGAGTAGGAGACAAAGT +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTLVPFC*WSRRQS
Trigger: ACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGCTTTCGGTAAATGTTaGTTCCTTGATCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVAFGKC*FLDQVC
Trigger: ACAGACCTGATCAAGGAATCAACATTTACCGAAAGC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000392952.7
CDS-3UTR TCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCATTACTCTGGGTGAGTaGAACCAACATGTGCACACA +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSITLGE*NQHVHT
Trigger: TGTGTGCACATGTTGGTTTCACTCACCCAGAGTAAT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACTGTGGTTCCCAGTCTaGTCCTTCCATGAGCTACAT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRLWFPV*SFHELH
Trigger: ATGTAGCTCATGGAAGGATCAGACTGGGAACCACAG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTCACGTCGGGAATCATaGTGTGGTTTCATATGCACG +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGSRRES*CGFICT
Trigger: CGTGCATATGAAACCACATCATGATTCCCGACGTGA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTTTTAGCAAAACTACCTaGTTATGCCCATGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATFSKTT*LCPCFP
Trigger: TGGGAAACATGGGCATAATCAGGTAGTTTTGCTAAA...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTTAGCAAAACTACCTaGTTATGCCCATGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQFSKTT*LCPCFP
Trigger: TGGGAAACATGGGCATAATCAGGTAGTTTTGCTAAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGGAGAGGATGAGAACTaGAAAAGAACTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTGEDEN*KRTAPA
Trigger: GGCTGGAGCAGTTCTTTTTCAGTTCTCATCCTCTCC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTTCCACCATCTTCCATaGGAGTCAGGAAAAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCFHHLP*ESGKGF
Trigger: GAACCCTTTTCCTGACTCTCATGGAAGATGGTGGAA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGTGGTTAATAAAAACTaGGATTGCTTCAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHVVNKN*DCFRGH
Trigger: GTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCAC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACACAGGAACCACACACATaGTTGGACAAGTCTGTACAT +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTQEPHT*LDKSVH
Trigger: ATGTACAGACTTGTCCAATCATGTGTGTGGTTCCTG...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSVMQSI*QRSAVS
Trigger: ACTCACTGCACTCCTTTGTCATATACTCTGCATCAC...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMVMQSI*QRSAVS
Trigger: ACTCACTGCACTCCTTTGTCATATACTCTGCATCAC...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATAGCGCCAGCAGCGCCTaGCCATTCTTGATATCTCTT +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHSASSA*PFLISL
Trigger: AAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATCTAAAGAGACCCCTTaGAAAAGCACATCAGCTCAA +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSSKETP*KSTSAQ
Trigger: TTGAGCTGATGTGCTTTTGCAAGGGGTCTCTTTAGA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTCATGTACAGATTCTaGATCCCCTTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFILMYRF*IPFFSR
Trigger: TCGAGAGAAGAAGGGGATGCAGAATCTGTACATGAG...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTCTCAAGTTGGATaGAGAACTGAGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: KFGPQYDILWGTATVSPFSSQVG*RTEFKR
Trigger: TCTTTTAAACTCAGTTCTGCATCCAACTTGAGAAGA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTCTTCTCAAGTTGGATaGAGAACTGAGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSSQVG*RTEFKR
Trigger: TCTTTTAAACTCAGTTCTGCATCCAACTTGAGAAGA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACGGTGCTTTCTGGCAATaGATTTCTGCAAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHGAFWQ*ISARCS
Trigger: ACTGCACCTTGCAGAAATGCATTGCCAGAAAGCACC...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAAATAGCCATCTTGTGTaGTGTGACCAGGATGGACAT +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTNSHLV*CDQDGH
Trigger: ATGTCCATCCTGGTCACAGCACACAAGATGGCTATT...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGCCCCTTTTACTTCATaGCATCATTATGCACTTAAG +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRAPFTS*HHYALK
Trigger: CTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGTGCAAGTTTCCCAATaGTCTTCCTATCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRVQVSQ*SSYLLI
Trigger: TATTAGGAGATAGGAAGAGCATTGGGAAACTTGCAC...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATGTGCAAGTTTCCCAATaGTCTTCCTATCTCCTAATA +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHVQVSQ*SSYLLI
Trigger: TATTAGGAGATAGGAAGAGCATTGGGAAACTTGCAC...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAKPKCR*IASCAS
Trigger: ACTTGCACAGCTAGCTATGCATCTACATTTTGGTTT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SNTKPFKKGGCEITATPWISWYH*KSQVPN
Trigger: ATTTGGGACTTGAGATTTGCAGTGATACCAACTTAT...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATATATGACAAAGGAGTaGAGTGAGTGCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTYMTKE*SECCWQ
Trigger: TTGCCAGCAGCACTCACTGCACTCCTTTGTCATATA...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTGCATCGTGCACAGCTaGGGTGGTAATGTTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTCIVHS*GGNVCH
Trigger: GTGACAAACATTACCACCCCAGCTGTGCACGATGCA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGGTGCCTGGGCTGCTaGGAACTTGGAAAACTTGAT +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVWCLGC*ELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: NTKPFKKGGCEITATPWTIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCGGCAAGTGTTACTGTTaGCTGGCCCGACATTTGACT +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVGKCYC*LARHLT
Trigger: AGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCTCACAAAATTACTCTaGGTGAGTGAAACCAACATG +
Preference number: 4 (lower is better)
Translates to: QYDILWGTATVSPFSNCHLTKLL*VSETNM
Trigger: CATGTTGGTTTCACTCACCCAGAGTAATTTTGTGAG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCTGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTACNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCTGCAAACTGCAGTGTaGCTTCCAACCAAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVLQTAV*LPTKQE
Trigger: CTCTTGCTTGGTTGGAAGCCACACTGCAGTTTGCAG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATACCCATCCCTCCAGCTaGAGCCTTTTGCTGGGAAAT +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHTHPSS*SLLLGN
Trigger: ATTTCCCAGCAAAAGGCTCCAGCTGGAGGGATGGGT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCAAAAGAGCAAGCTTTaGGGCATACTGACAAACACT +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCQKSKL*GILTNT
Trigger: AGTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCTATCACAACATAGTTaGGTAGTTCCCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHLSQHS*VVPLKY
Trigger: GTACTTTAAGGGAACTACCCAACTATGTTGTGATAG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTATCACAACATAGTTaGGTAGTTCCCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLSQHS*VVPLKY
Trigger: GTACTTTAAGGGAACTACCCAACTATGTTGTGATAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCTCCACCTTTGGTCAATaGGTTCAGGAAGTGACTCAT +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTSTFGQ*VQEVTH
Trigger: ATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGA...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATTTATGGCAGTGAATaGCAGGCTTCTCTGATGGGT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCIYGSE*QASLMG
Trigger: ACCCATCAGAGAAGCCTGTCATTCACTGCCATAAAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCCACATTTATGGCAGTaGATGACAGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGPHLWQ*MTGFSD
Trigger: ATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTTGTCATAAATTGCCTTaGCCTTCGGAATGGCTGCTA +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLCHKLP*PSEWLL
Trigger: TAGCAGCCATTCCGAAGGTCAAGGCAATTTATGACA...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGCTTTCGGTAAATGTTaGTTCCTTGATCTGGAACAT +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCAFGKC*FLDLEH
Trigger: ATGTTCCAGATCAAGGAATCAACATTTACCGAAAGC...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLINCSS*SCRRLR
Trigger: TCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAAT...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGGCTTTCGGTAAATGTTaGTTCCTTGATCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMAFGKC*FLDQVC
Trigger: ACAGACCTGATCAAGGAATCAACATTTACCGAAAGC...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCAAAATTACTCTGGGTaGGTGAAACCAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTQNYSG*VKPTCA
Trigger: TGCACATGTTGGTTTCACTCACCCAGAGTAATTTTG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATAATGGGTTCAGGAAGTaGCTCATGGGAACTGCACTC +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHNGFRK*LMGTAL
Trigger: GAGTGCAGTTCCCATGAGTCACTTCCTGAACCCATT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAAACGTATGCATATATaGTCAGTAAGCAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELKRMHI*SVSSSH
Trigger: ATGTGAGCTGCTTACTGATCATATATGCATACGTTT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCAAACGTATGCATATATaGTCAGTAAGCAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARKRMHI*SVSSSH
Trigger: ATGTGAGCTGCTTACTGATCATATATGCATACGTTT...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTGTGATGCAGAGTATATaGCAAAGGAGTGCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCVMQSI*QRSAVS
Trigger: ACTCACTGCACTCCTTTGTCATATACTCTGCATCAC...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTGCTGGTAGTCCAGGGTaGAGAGATACTCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVAGSPG*RDTLRS
Trigger: AGAACGGAGAGTATCTCTGCACCCTGGACTACCAGC...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: RNQTCYGKQKELREGFLSEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGATTTTCCTGCATTCTaGACAATCCAGAATCCAGAT +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTDFPAF*TIQNPD
Trigger: ATCTGGATTCTGGATTGTGCAGAATGCAGGAAAATC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTAGTGAAACCAACATGTaGACACACACCCATGAATTC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFISETNM*THTHEF
Trigger: GAATTCATGGGTGTGTGTGCACATGTTGGTTTCACT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCACCAAAGGCTAAACTaGAAACTGCAGTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVHQRLN*KLQCGF
Trigger: GAAGCCACACTGCAGTTTGCAGTTTAGCCTTTGGTG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTCAGTTCTTTATCACTaGAATCTTAGGCAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCSVLYH*NLRQAP
Trigger: AGGGGCCTGCCTAAGATTGCAGTGATAAAGAACTGA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 4 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLICISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACGCCCCTTTTACTTCATaGCATCATTATGCACTTAAG +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNAPFTS*HHYALK
Trigger: CTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGC...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCGAACTGAAAAAGAACTaGTCCAGCCTCTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVELKKN*SSLCLR
Trigger: TCTGAGGCAGAGGCTGGAGCAGTTCTTTTTCAGTTC...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACC +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMVKHLM*KCLVWT
Trigger: GGTCCAGACCAAACATTTCCACATCAAGTGTTTCAC...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCGGGATGCCAAACGGTaGAGCCTTGAAGATACATTT +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVRDAKR*SLEDTF
Trigger: AAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCATGCTGTTTGTAGATaGGTGGCTTTCGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTHAVCR*VAFGKC
Trigger: ACATTTACCGAAAGCCACCCATCTACAAACAGCATG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAGGCATGTGGCCATCTaGGAGTGTCTGGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVRHVAI*ECLEIS
Trigger: CGAGATTTCCAGACACTCCCAGATGGCCACATGCCT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCGTCGAATCAGACTTTTaGAATAAAAGAAATCGGATG +
Preference number: 4 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAVESDF*NKRNRM
Trigger: CATCCGATTTCTTTTATTCCAAAAGTCTGATTCGAC...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CCA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCGTCGAATCAGACTTTTaGAATAAAAGAAATCGGATG +
Preference number: 4 (lower is better)
Translates to: PQYDILWGTATVSPFSNCVESDF*NKRNRM
Trigger: CATCCGATTTCTTTTATTCCAAAAGTCTGATTCGAC...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTAGCATGATAATAAAGTaGCTTACCCTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLSMIIK*LTLLGV
Trigger: CACACCCAGGAGGGTAAGCCACTTTATTATCATGCT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCAAAAGAGCAAGCTTTaGGGCATACTGACAAACACT +
Preference number: 4 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCQKSKL*GILTNT
Trigger: AGTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCTATCACAACATAGTTaGGTAGTTCCCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATLSQHS*VVPLKY
Trigger: GTACTTTAAGGGAACTACCCAACTATGTTGTGATAG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTATCACAACATAGTTaGGTAGTTCCCTTAAAGTAC +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSLSQHS*VVPLKY
Trigger: GTACTTTAAGGGAACTACCCAACTATGTTGTGATAG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTCCACCTTTGGTCAATaGGTTCAGGAAGTGACTCAT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGSTFGQ*VQEVTH
Trigger: ATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCGTCTCTGTCCACCTTTaGTCAATGGGTTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVVSVHL*SMGSGS
Trigger: ACTTCCTGAACCCATTGACCAAAGGTGGACAGAGAC...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 72 bp GACTTTCTCTTTTTGGTGTTGCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGTTTGGGCCTCAATATG +
Preference number: 4 (lower is better)
Translates to: DFLFLVLLSDGS*QILQSSLGLNM
Trigger: CATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
3UTR CAA 72 bp CTTCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACCAGACTTTCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLGKCYCWLARH*THGVLTRLSLF
Trigger: AAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTCTTTTTGGTGTTGCTaGGCGACGGTAGTTTGCAAA +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVSFWCC*ATVVCK
Trigger: TTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGATAAAAGAAATCGGATaGAGAACGCCGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWIKEIG*RTPNVW
Trigger: CCAAACATTCGGCGTTCTTCATCCGATTTCTTTTAT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR TCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAGGGCAAGAAGAAAGCTaGAAAGGCCAAATTAAATAC +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTGQEES*KGQIKY
Trigger: GTATTTAATTTGGCCTTTTCAGCTTTCTTCTTGCCC...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGCAAAATTACTCTGGGTaGGTGAAACCAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGQNYSG*VKPTCA
Trigger: TGCACATGTTGGTTTCACTCACCCAGAGTAATTTTG...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTAATGTCCCCATTCTATaGCAGACCCATGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCNVPIL*QTHVFF
Trigger: AAAGAAGACATGGGTCTGTCATAGAATGGGGACATT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGTGGTTAATAAAAACTaGGATTGCTTCAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: FANSPIKFGPQYDILWGTVVNKN*DCFRGH
Trigger: GTGTCCTCTGAAGCAATCTCAGTTTTTATTAACCAC...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTCATTGTCTACTTTTaGATAGATAGTATGACCTGG +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNLIVYF*IDSMTW
Trigger: CCAGGTCATACTATCTATGCAAAAGTAGACAATGAG...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCCTCATGTACAGATTCTaGATCCCCTTCTTCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVLMYRF*IPFFSR
Trigger: TCGAGAGAAGAAGGGGATGCAGAATCTGTACATGAG...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: NSPIKFGPQYDILWGTATISWYH*KSQVPN
Trigger: ATTTGGGACTTGAGATTTGCAGTGATACCAACTTAT...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGGACAATGGTTTCCTCTaGTGTAAAGAAACGTATGCA +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMDNGFL*CKETYA
Trigger: TGCATACGTTTCTTTACAGCAGAGGAAACCATTGTC...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCGACAATGGTTTCCTCTaGTGTAAAGAAACGTATGCA +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSDNGFL*CKETYA
Trigger: TGCATACGTTTCTTTACAGCAGAGGAAACCATTGTC...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTATATGACAAAGGAGTaGAGTGAGTGCTGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVYMTKE*SECCWQ
Trigger: TTGCCAGCAGCACTCACTGCACTCCTTTGTCATATA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCTACAAGCAAAGCAATTaGGATGGTAGGTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVYKQSN*DGRSCP
Trigger: TGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTA...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAGCCGGCACAATTGCTaGAGAAGGTGGTTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVSRHNC*RRWFLS
Trigger: CGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGAGAATCGTAGCGACTaGCTAACAGAGATGACCTTT +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTENRSD*LTEMTF
Trigger: AAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFICQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGATTGCCATTCACGAGTaGGACTTAGAAGAGTTTTGC +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGIAIHE*DLEEFC
Trigger: GCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAAT...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAISQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAAAACACTCGTTTCTaGGAAGCCACTATTAGAACA +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLENTRF*EATIRT
Trigger: TGTTCTAATAGTGGCTTCCCAGAAACGAGTGTTTTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR CCA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGTCGAATCAGACTTTTaGAATAAAAGAAATCGGATG +
Preference number: 4 (lower is better)
Translates to: YDILWGTATVSPFSNCHSVESDF*NKRNRM
Trigger: CATCCGATTTCTTTTATTCCAAAAGTCTGATTCGAC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCAGCATGATAATAAAGTaGCTTACCCTCCTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVSMIIK*LTLLGV
Trigger: CACACCCAGGAGGGTAAGCCACTTTATTATCATGCT...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCATTGATATACTGGATTaGGATGGAGAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSIDILD*DGEDEN
Trigger: GTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTCCACCTTTGGTCAATaGGTTCAGGAAGTGACTCAT +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTSTFGQ*VQEVTH
Trigger: ATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGCTTTCGGTAAATGTTaGTTCCTTGATCAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRAFGKC*FLDQVC
Trigger: ACAGACCTGATCAAGGAATCAACATTTACCGAAAGC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR TCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACAATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATACATAAGGTAATGTaGAAAGCTCACATGTGGACA +
Preference number: 4 (lower is better)
Translates to: NQTCYGKQKELREGFLSFIHKVM*KAHMWT
Trigger: TGTCCACATGTGAGCTTTTCACATTACCTTATGTAT...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTTCATTAGTGGGAGCTaGTTTAGGGTTCAGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCFISGS*FRVQFF
Trigger: AAAGAACTGAACCCTAAATCAGCTCCCACTAATGAA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTAACTCTATCTCTTTaGGGTTTTGGAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLLTLSL*GFGEQE
Trigger: TTCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAA...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTT +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVSPFSN*HSRVGL
Trigger: AAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACT...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGTTTTTCCTTTCTTTaGAAAGGTGGAGCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVCFSFL*KGGAPD
Trigger: GTCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVCISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: WNKQEATETPKAKLQTAVISWYH*KSQVPN
Trigger: ATTTGGGACTTGAGATTTGCAGTGATACCAACTTAT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATGTGACTCATGGGAACTaGACTCTTAGGAGAAACACT +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHVTHGN*TLRRNT
Trigger: AGTGTTTCTCCTAAGAGTGCAGTTCCCATGAGTCAC...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGAGGAATACTGGAGCCTaGCCTAGAATAAATACTTTC +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGRNTGA*PRINTF
Trigger: GAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCT...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGAGTCAGCACTGTTGTTaGACAACAGATAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMSQHCC*TTDKGK
Trigger: TTTTCCTTTATCTGTTGTCCAACAACAGTGCTGACT...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATGTAATCCTAATATTTaGTGCCAGCAGGAAGAACTT +
Preference number: 4 (lower is better)
Translates to: LSDGSLQILQSSLGLNMTCNPNI*CQQEEL
Trigger: AAGTTCTTCCTGCTGGCACCAAATATTAGGATTACA...TGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGAAATTTCTACGCCATaGTTCTTGGCAAGTGTTACT +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTEISTP*FLASVT
Trigger: AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTTCTTCTCAAGTTGGATaGAGAACTGAGTTTAAAAGA +
Preference number: 4 (lower is better)
Translates to: EPDLLWEAERVKGRFPFISSQVG*RTEFKR
Trigger: TCTTTTAAACTCAGTTCTGCATCCAACTTGAGAAGA...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTATAGGAGGCTACTGGTaGTTTCTGGCAATGCATTTC +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVIGGYW*FLAMHF
Trigger: GAAATGCATTGCCAGAAAGCACCAGTAGCCTCCTAT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGCCCCTTTTACTTCATaGCATCATTATGCACTTAAG +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRAPFTS*HHYALK
Trigger: CTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGAAACCAAAATGTAGATaGATAGCTAGCTGTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLKPKCR*IASCAS
Trigger: ACTTGCACAGCTAGCTATGCATCTACATTTTGGTTT...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGACAATGGTTTCCTCTaGTGTAAAGAAACGTATGCA +
Preference number: 4 (lower is better)
Translates to: SVFRNIEISTPCFLASVTDNGFL*CKETYA
Trigger: TGCATACGTTTCTTTACAGCAGAGGAAACCATTGTC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVLFVDG*LSVNVD
Trigger: ATCAACATTTACCGAAAGCCACCCATCTACAAACAG...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVCQTPV*TFQRFP
Trigger: GGGAAATCTTTGGAATGTCCATACAGGAGTTTGACA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCCGACATTTGACTCATaGTGTTTTAACCAGACTTTC +
Preference number: 4 (lower is better)
Translates to: YSVFRNIEISTPCFLASVPTFDS*CFNQTF
Trigger: GAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATTCATTATGGCTTTaGAAACAGTTCCCTGACAAA +
Preference number: 4 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSYSLWL*KQFPDK
Trigger: TTTGTCAGGGAACTGTTTCCAAAGCCATAATGAATA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS-3UTR CCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAATTGATATACTGGATTaGGATGGAGAGGATGAGAAC +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRIDILD*DGEDEN
Trigger: GTTCTCATCCTCTCCATCCCAATCCAGTATATCAAT...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATAAAAGAAATCGGATaGAGAACGCCGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHIKEIG*RTPNVW
Trigger: CCAAACATTCGGCGTTCTTCATCCGATTTCTTTTAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369252.8
ENST00000392952.7
CDS-3UTR TCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAGCTTTGGGGCATACTaGCAAACACTTCATTGGTTA +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVSFGAY*QTLHWL
Trigger: TAACCAATGAAGTGTTTGTCAGTATGCCCCAAAGCT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTATAAGTTGGTATCACTaGAAATCTCAAGTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCISWYH*KSQVPN
Trigger: ATTTGGGACTTGAGATTTGCAGTGATACCAACTTAT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp CTATCATCATTGAGGCCCCTTTTACTTCATGCCATCATTATGCACTTAAGAGTCGTTGATTCCTTGATCTaGAACATGGAAATGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LSSLRPLLLHAIIMHLRVVDSLI*NMEMFR
Trigger: CCTAAACATTTCCATGTTCCAGATCAAGGAATCAAC...GACTCTTAAGTGCATAATGATGGCATGAAGTAAAAGGGGCCTCAATGATGATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR GCA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATGCATTTCTGCAAGGTaGAGTTTAAATGAACTCATA +
Preference number: 4 (lower is better)
Translates to: LNILIAKSFASQVPVNSRCISAR*SLNELI
Trigger: TATGAGTTCATTTAAACTGCACCTTGCAGAAATGCA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTTTAACTCTATCTCTTTaGGGTTTTGGAGAACAGGAA +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVLTLSL*GFGEQE
Trigger: TTCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAA...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR TCA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAAACGTATGCATATATaGTCAGTAAGCAGCTCACAT +
Preference number: 4 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVKRMHI*SVSSSH
Trigger: ATGTGAGCTGCTTACTGATCATATATGCATACGTTT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CCA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATATATGGAAATATCTTTaGTTCCAACATGTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHIWKYL*FQHVGH
Trigger: ATGCCCAACATGTTGGAACCAAAGATATTTCCATAT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS CCA 90 bp ACTCTGGGAGTGGAAGCGCGCCTCGGCAGACAGATCCGCGGGCGCTaGGGCAGCCAGGAGAAGCCCCGGCATCCGCTTGTGAGGTCCGGG +
Preference number: 5 (lower is better)
Translates to: TLGVEARLGRQIRGR*GSQEKPRHPLVRSG
Trigger: CCCGGACCTCACAAGCGGATGCCGGGGCTTCTCCTGGCTGCCCCAGCGCCCGCGGATCTGTCTGCCGAGGCGCGCTTCCACTCCCAGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS CCA 90 bp CCGACGAGCAGGACTGAAGAAGGAACGAGGAATAAACTCTGGGAGTaGAAGCGCGCCTCGGCAGACAGATCCGCGGGCGCTGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PTSRTEEGTRNKLWE*KRASADRSAGAGAA
Trigger: GGCTGCCCCAGCGCCCGCGGATCTGTCTGCCGAGGCGCGCTTCCACTCCCAGAGTTTATTCCTCGTTCCTTCTTCAGTCCTGCTCGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS CCA 90 bp GGTCCTCCGACGAGCAGGACTGAAGAAGGAACGAGGAATAAACTCTaGGAGTGGAAGCGCGCCTCGGCAGACAGATCCGCGGGCGCTGGG +
Preference number: 5 (lower is better)
Translates to: GPPTSRTEEGTRNKL*EWKRASADRSAGAG
Trigger: CCCAGCGCCCGCGGATCTGTCTGCCGAGGCGCGCTTCCACTCCCAGAGTTTATTCCTCGTTCCTTCTTCAGTCCTGCTCGTCGGAGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS-3UTR CAA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS GCA 90 bp GAGACCCCCTACACCTGGCCTGGTTCATGCAGTGTCCCCAAGGCCTaGAGGGACAGCTTGACCCAGGCACCAGGCATGTCTGCTCTTCAC +
Preference number: 5 (lower is better)
Translates to: ETPYTWPGSCSVPKA*RDSLTQAPGMSALH
Trigger: GTGAAGAGCAGACATGCCTGGTGCCTGGGTCAAGCTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTAGGGGGTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS TCA 90 bp GGGACGTGGTTGGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGGACCGATGGATCATCCGATCCCGAA +
Preference number: 5 (lower is better)
Translates to: GTWLECSCGGCTQGS*WSPGSWTDGSSDPE
Trigger: TTCGGGATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 90 bp CTCATTGCCAGGTCTGTGGAAATGCTGGGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTTGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: LIARSVEMLGRAGRG*SVAVAAVHRGVDGA
Trigger: GGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGGCAATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000651023.1
ENST00000651092.1
CDS CCA 90 bp ACCCTTACCAGGTCTGTGGAAATGCTGGGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTTGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: TLTRSVEMLGRAGRG*SVAVAAVHRGVDGA
Trigger: GGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGGTAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466400.1
CDS CCA 90 bp AGGACTCTCCAAGGCCAAAGCAAGAGAGACCCCCTACACCTGGCCTaGTTCATGCAGTGTCCCCAAGGCCTGCAGGGACAGCTTGACCCA +
Preference number: 5 (lower is better)
Translates to: RTLQGQSKRDPLHLA*FMQCPQGLQGQLDP
Trigger: TGGGTCAAGCTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTAGGGGGTCTCTCTTGCTTTGGCCTTGGAGAGTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 90 bp CAGAGAGGACTCTCCAAGGCCAAAGCAAGAGAGACCCCCTACACCTaGCCTGGTTCATGCAGTGTCCCCAAGGCCTGCAGGGACAGCTTG +
Preference number: 5 (lower is better)
Translates to: QRGLSKAKARETPYT*PGSCSVPKACRDSL
Trigger: CAAGCTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTAGGGGGTCTCTCTTGCTTTGGCCTTGGAGAGTCCTCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS GCA 90 bp TGGGTTACATATCAGGCTTCTCTCCGAAGCTCGGCTAAGGCAACGTaGATCCCTCTAGAGACGCACTCCGGAAACCAGCCCCGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: WVTYQASLRSSAKAT*IPLETHSGNQPRVR
Trigger: CCGCACACGGGGCTGGTTTCCGGAGTGCGTCTCTAGAGGGATGCACGTTGCCTTAGCCGAGCTTCGGAGAGAAGCCTGATATGTAACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392952.7
ENST00000428430.1
CDS CCA 90 bp CGGCTGTACACAGGGGAGTTGATGGAGCCCTGGCTCGTGGACCGATaGATCATCCGATCCCGAACATCCTGGTACCCTTCTGCTGATGGA +
Preference number: 5 (lower is better)
Translates to: RLYTGELMEPWLVDR*IIRSRTSWYPSADG
Trigger: TCCATCAGCAGAAGGGTACCAGGATGTTCGGGATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 90 bp TCCTTGATCAGGTCTGTGGAAATGCTGGGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTTGATGGAGCC +
Preference number: 5 (lower is better)
Translates to: SLIRSVEMLGRAGRG*SVAVAAVHRGVDGA
Trigger: GGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGATCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000428430.1
ENST00000440467.5
CDS CCA 90 bp GTAGATGCCAGACCTCAGCCCGACAGACTGAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCTCTCCGAAGCTCGGCTAAGGCAACG +
Preference number: 5 (lower is better)
Translates to: VDARPQPDRLRLPPA*VTYQASLRSSAKAT
Trigger: CGTTGCCTTAGCCGAGCTTCGGAGAGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAGGTCTGGCATCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392952.7
ENST00000428430.1
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: FGPQYDILWGTATVSPFSESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: SNTKPFKKGGCEITATPWESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: LSNTKPFKKGGCEITATPESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS CCA 90 bp GGCAGGCATCTTGGCATGGATTTCCAAGCAATGAGAAATGGGGAGTaGGGACCCAAGGAGCGGTGCTGCCCCACAATTCTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GRHLGMDFQAMRNGE*GPKERCCPTILSVP
Trigger: GGGAACAGAGAGAATTGTGGGGCAGCACCGCTCCTTGGGTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCATGCCAAGATGCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CAA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: APVLGGEQEPDLLWEAERGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGAACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: APVLGGEQEPDLLWEAERTFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp CTTGCAAGGCTCCCCACATTTATGGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTGAGGGTGGGCCACTTTGTAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LARLPTFMAVNDRLL*WVVRVLRVGHFVVS
Trigger: GGAGACTACAAAGTGGCCCACCCTCAGGACCCTCACCACCCATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGGGGAGCCTTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS CCA 90 bp TTCCGCAGCCGGCACAATTGCTGGAGAAGGTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCACAGAGTTGACAAAGGCAGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FRSRHNCWRRWFLSD*TTSAVHRVDKGSLS
Trigger: GGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 90 bp ATGTTGGGCATAGACACTCCTCGGTCCATTCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGGAAATCTCGCACTCCCCCGCTGACA +
Preference number: 5 (lower is better)
Translates to: MLGIDTPRSILIAGM*PSGSVWKSRTPPLT
Trigger: TGTCAGCGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGAGTGTCTATGCCCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: QSICKAYLPPPPTASWAARQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGGCCTGAGCGTAAGTaGGAGTTAGAGGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGPERK*ELEGGC
Trigger: ACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAGGGCCTGAGCGTAAGTaGGAGTTAGAGGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: LSNTKPFKKGGCEITATPGPERK*ELEGGC
Trigger: ACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCC...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCATGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp CTTGCAAGGCTCCCCACATTTATGGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTGAGGGTGGGCCACAAAAGGATCAAC +
Preference number: 5 (lower is better)
Translates to: LARLPTFMAVNDRLL*WVVRVLRVGHKRIN
Trigger: GTTGATCCTTTTGTGGCCCACCCTCAGGACCCTCACCACCCATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGGGGAGCCTTGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS TCA 90 bp CTTGCAAGGCTCCCCACATTTATGGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTGAGGGTGGGCCACTTTTTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LARLPTFMAVNDRLL*WVVRVLRVGHFFLH
Trigger: GTGAAGGAAAAAGTGGCCCACCCTCAGGACCCTCACCACCCATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGGGGAGCCTTGCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS CCA 90 bp ACCAGGCCAGTGGTCCGTCTCAATCTTTGGTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAACTTGGAAAACTTGATGATATCTTC +
Preference number: 5 (lower is better)
Translates to: TRPVVRLNLWCLAGV*CLGCWELGKLDDIF
Trigger: GAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACACCAAAGATTGAGACGGACCACTGGCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCAGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: QSICKAYLPPPPTASWAAGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGRQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHSACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: LSNTKPFKKGGCEITATPYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGGGCCTGAGCGTAAGTaGGAGTTAGAGGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIGPERK*ELEGGC
Trigger: ACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCC...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: DILWGTATVSPFSNCHSRGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: NTKPFKKGGCEITATPWTGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp AAGGTGGTTTCTTTCGGACTGGACGACATCGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCATTGAATGTGACTCGGTCTCCGGGT +
Preference number: 5 (lower is better)
Translates to: KVVSFGLDDIGCAQS*QRQSLPLNVTRSPG
Trigger: ACCCGGAGACCGAGTCACATTCAATGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS GCA 90 bp TGGTTCCAACATGTTGGGCATAGACACTCCTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGGGAGTGTCTGGTAATCTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: WFQHVGHRHSSVHSH*RHVAIWECLVISHS
Trigger: GGAGTGCGAGATTACCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGAGTGTCTATGCCCAACATGTTGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000649363.1
CDS GCA 90 bp TGGTTCCAACATGTTGGGCATAGACACTCCTCGGTCCATTCTCATTaGAGGCATGTGGCCATCTGGGAGTGTCTGGAAATCTCGCACTCC +
Preference number: 5 (lower is better)
Translates to: WFQHVGHRHSSVHSH*RHVAIWECLEISHS
Trigger: GGAGTGCGAGATTTCCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGAGTGTCTATGCCCAACATGTTGGAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPRQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFRQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PQYDILWGTATVSPFSNCSACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSSACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLISACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWTFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CCTCCCCAGAGCAGAGCACTACTCTGCTTGCAGATAGGAGGCTACTGGTGCTTTCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PPQSRALLCLQIGGYWCFPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...AAAGCACCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCTGCTCTGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGGGCCTGAGCGTAAGTaGGAGTTAGAGGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSGPERK*ELEGGC
Trigger: ACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGACTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: DILWGTATVSPFSNCHSRLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCCTGTCCTAGGCGGGGAGCAGGAACCAGACCTGCTATGGGAAGCAGAAAGACTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: APVLGGEQEPDLLWEAERLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...TCTTTCTGCTTCCCATAGCAGGTCTGGTTCCTGCTCCCCGCCTAGGACAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACAAGAACGCCGAATGTTaGGCAGCCGCAGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDKNAEC*AAAAFP
Trigger: AGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCTT...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CAA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: VALYIGTREACHIYNPLPSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp GAGGGTGGGCCACTTTGTAGTCTCCCATGGTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGGTCATTAACATGCACAAAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: EGGPLCSLPWCDEGP*AQSFPRSLTCTKLQ
Trigger: CTGGAGCTTTGTGCATGTTAATGACCTTGGAAATGACTGAGCTCACGGACCCTCATCACACCATGGGAGACTACAAAGTGGCCCACCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp TGGTGCCTGGGCTGCTGGGAACTTGGAAAACTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGCCAAGGCAGCTGCATCATGCTGTTT +
Preference number: 5 (lower is better)
Translates to: WCLGCWELGKLDDIF*GLALGCQGSCIMLF
Trigger: AAACAGCATGATGCAGCTGCCTTGGCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS CCA 90 bp TGTGCCAGGTCACAGCCACACACTTTGCAGGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACCCGAAGCACTTCACCCTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: CARSQPHTLQVKHLM*KCLVWTRSTSPLQG
Trigger: GCCTTGCAAGGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGACCTGGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGGTGGAAACGGGCGCTaGCAGATAGTACAAGCAAAG +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNGGNGR*QIVQAK
Trigger: CTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: PQYDILWGTATVSPFSNCRQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVTFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHTFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHETFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: FGPQYDILWGTATVSPFSLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTACTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGESGTW*ECSCGG
Trigger: GCCGCCACAGCTACACTCCAACCACGTCCCGCTCTC...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGGGCCTGAGCGTAAGTaGGAGTTAGAGGGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIGPERK*ELEGGC
Trigger: ACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCC...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: PQYDILWGTATVSPFSNCLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...GCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGAAGAACGCCGAATGTTaGGCAGCCGCAGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVKNAEC*AAAAFP
Trigger: AGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCTT...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CAA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGTCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: TELPCSLMEFHSCQGTAESKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACAGATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: TRSHSRKAGVKSLPPHGQMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...CTGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: LSNTKPFKKGGCEITATPRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp TCAGGCCAGGGTTCCTTTTCTTCTAATTCTGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGGCTTCAAGTTCAGAACACGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SGQGSFSSNSVPWLC*AENSSRLQVQNTAK
Trigger: CTTGGCCGTGTTCTGAACTTGAAGCCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAACAGAATTAGAAGAAAAGGAACCCTGGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000428430.1
CDS CCA 90 bp AGGGTGGGCCACAAAAGGATCAACGCTGTTACATACACGCCCACGTaGGCAGTAGTCCTTGGGACAGAGATACAGCAAATGAGTGATAGT +
Preference number: 5 (lower is better)
Translates to: RVGHKRINAVTYTPT*AVVLGTEIQQMSDS
Trigger: ACTATCACTCATTTGCTGTATCTCTGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGTAACAGCGTTGATCCTTTTGTGGCCCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAISACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTACCTTCCCGCAGGACTaGCATTTAAAGCACCCCAAG +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLITFPQD*HLKHPK
Trigger: CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTACGGAGCACCATCCTaGCTGATGTACTCCCCGGTG +
Preference number: 5 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNYGAPS*LMYSPV
Trigger: CACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: SNTKPFKKGGCEITATPWSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: NTKPFKKGGCEITATPWTSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACATTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: NTKPFKKGGCEITATPWTFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...TGTCCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHEPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: VALYIGTREACHIYNPLPPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCATGGACCAGGATGGACATTTaGAGGACAAGCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SNTKPFKKGGCEITATPWTRMDI*RTSMLS
Trigger: GCTCAGCATGCTTGTCCTCAAAATGTCCATCCTGGT...CCATGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTACCAGGATGGACATTTaGAGGACAAGCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPTRMDI*RTSMLS
Trigger: GCTCAGCATGCTTGTCCTCAAAATGTCCATCCTGGT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTACCAGGATGGACATTTaGAGGACAAGCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLTRMDI*RTSMLS
Trigger: GCTCAGCATGCTTGTCCTCAAAATGTCCATCCTGGT...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 5 (lower is better)
Translates to: VALYIGTREACHIYNPLPRPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTGGAGATGACAGAATaGGGTAGCGGAGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLEMTE*GSGVDA
Trigger: AGCATCTACTCCGCTACCCAATTCTGTCATCTCCAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGATTGGAGATGACAGAATaGGGTAGCGGAGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGLEMTE*GSGVDA
Trigger: AGCATCTACTCCGCTACCCAATTCTGTCATCTCCAA...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGATGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: DILWGTATVSPFSNCHSRCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACAGAGCTGCCCTGTTCCCTGATGGAGTTCCATTCCTGCCAGGGCACGGCTGAGAAAAGAACATCAGTTTaGTGGACAATGGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: TELPCSLMEFHSCQGTAEKRTSV*WTMVSS
Trigger: AGAGGAAACCATTGTCCACAAAACTGATGTTCTTTT...CTCAGCCGTGCCCTGGCAGGAATGGAACTCCATCAGGGAACAGGGCAGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATGACGGCTCATTGCCTTaGATATGGGGAATGAAGTGG +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNDGSLP*IWGMKW
Trigger: CCACTTCATTCCCCATATCAAAGGCAATGAGCCGTC...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGTCAGATGAGGTGACTTaGCTTTTCTCAGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVSDEVT*LFSELH
Trigger: GTGCAGCTCTGAGAAAAGCAAAGTCACCTCATCTGA...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CAA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATCAGATGAGGTGACTTaGCTTTTCTCAGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLSDEVT*LFSELH
Trigger: GTGCAGCTCTGAGAAAAGCAAAGTCACCTCATCTGA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCTTGATGTGGAAATGTTaGGTCTGGACCCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVLMWKC*VWTRST
Trigger: AGTGCTTCGGGTCCAGACCAAACATTTCCACATCAA...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGAGGCAGTCTCTCCCATaGAATGTGACTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: WNKQEATETPKAKLQTAVRQSLP*NVTRSP
Trigger: CGGAGACCGAGTCACATTCAATGGGAGAGACTGCCT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCCGCAGCCGGCACAATaGCTGGAGAAGGTGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSPQPAQ*LEKVVS
Trigger: AGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCAGCGCCTGCCCATTCTaGATATCTCTTCCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: FANSPIKFGPQYDILWGTSACPF*ISLPQP
Trigger: CGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCT...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: NSPIKFGPQYDILWGTATWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: QYDILWGTATVSPFSNCHWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGAGTGTTTTTCCTTTCTTaGCAAAGGTGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGVFFLS*QRWSSR
Trigger: TCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACAC...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: QSICKAYLPPPPTASWAAQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCAAGTTTAGCCTCACTCTaGATCTTTGAGTCACACACA +
Preference number: 5 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASLASL*IFESHT
Trigger: TGTGTGTGACTCAAAGATCAAGAGTGAGGCTAAACT...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTTGCAAAGGTGGAGCTCCAGACAGCTCCTGTCCTAGGCGGGGAGCAGGAACCAAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 5 (lower is better)
Translates to: FAKVELQTAPVLGGEQEPRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...TGGTTCCTGCTCCCCGCCTAGGACAGGAGCTGTCTGGAGCTCCACCTTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMLAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTTTAGCAGGAACCAGGTaGCCCCACAACCCATCCCTC +
Preference number: 5 (lower is better)
Translates to: EPDLLWEAERVKGRFPFILAGTR*PHNPSL
Trigger: GAGGGATGGGTTGTGGGGCAACCTGGTTCCTGCTAA...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGGCTGCCTTGGGTTTTaGTTGAAGTTCACTAGACAA +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWGCLGF*LKFTRQ
Trigger: TTGTCTAGTGAACTTCAACAAAAACCCAAGGCAGCC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS CCA 90 bp CTTGGAGCCAGCAGTCTGGGTTGGAACATGGCTGTTCTATCGGTGTaGCCAATTCAAGAAAGACAAAGTGTTCCATACCTGGTAATCTCG +
Preference number: 5 (lower is better)
Translates to: LGASSLGWNMAVLSV*PIQERQSVPYLVIS
Trigger: CGAGATTACCAGGTATGGAACACTTTGTCTTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 90 bp AGAGATCAACCACAACAAGCATCTTCTCAACAGAAACTGTTGCCTTaGAGCCAGCAGTCTGGGTTGGAACATGGCTGTTCTATCGGTGTG +
Preference number: 5 (lower is better)
Translates to: RDQPQQASSQQKLLP*SQQSGLEHGCSIGV
Trigger: CACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGTTGTGGTTGATCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGACTGTACACAGGGGAGTaGATGGAGCCCTGGCTCGTG +
Preference number: 5 (lower is better)
Translates to: LNILIAKSFASQVPVNSRLYTGE*MEPWLV
Trigger: CACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAG...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: SSLGLNMTSYGAPPLSVLWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: FGPQYDILWGTATVSPFSWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCACATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAAHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLILFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: TSYGAPPLSVLSLIAIHELSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...CTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: LGLNMTSYGAPPLSVLSLFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: QYDILWGTATVSPFSNCHPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGAAATCACTGCCACCCCATGGACAGACCCCTCACTCTTCCTTCTTAGCCGCATCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: VKSLPPHGQTPHSSFLAASKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...TGCGGCTAAGAAGGAAGAGTGAGGGGTCTGTCCATGGGGTGGCAGTGATTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATCCCAGGTGGCCACCATaGTTATTGACAGGTAAGGAA +
Preference number: 5 (lower is better)
Translates to: QYDILWGTATVSPFSNCHPRWPP*LLTGKE
Trigger: TTCCTTACCTGTCAATAACAATGGTGGCCACCTGGG...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTCCAGCTGGAGCCTTTaGCTGGGAAATGGAGTAGGG +
Preference number: 5 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWSSWSL*LGNGVG
Trigger: CCCTACTCCATTTCCCAGCAAAAGGCTCCAGCTGGA...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACTGCCTTGGGTTTTTGTaGAAGTTCACTAGACAAGGT +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDCLGFL*KFTRQG
Trigger: ACCTTGTCTAGTGAACTTCAACAAAAACCCAAGGCA...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS GCA 90 bp ACTAGAGAGATCAACCACAACAAGCATCTTCTCAACAGAAACTGTTaGCTTGGAGCCAGCAGTCTGGGTTGGAACATGGCTGTTCTATCG +
Preference number: 5 (lower is better)
Translates to: TREINHNKHLLNRNC*LGASSLGWNMAVLS
Trigger: CGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGTTGTGGTTGATCTCTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 90 bp TCATGTCGTTGCGTCTCCAAAGAGGTAACCTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCCGAAACACTTCAGGGGCTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: SCRCVSKEVTCQTPV*TFQRFPETLQGLSG
Trigger: GCCACTTAGCCCCTGAAGTGTTTCGGGAAATCTTTGGAATGTCCATACAGGAGTTTGACAGGTTACCTCTTTGGAGACGCAACGACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CCA 90 bp TCAACAGAAACTGTTGCCTTGGAGCCAGCAGTCTGGGTTGGAACATaGCTGTTCTATCGGTGTGGCCAATTCAAGAAAGACAAAGTGTTC +
Preference number: 5 (lower is better)
Translates to: STETVALEPAVWVGT*LFYRCGQFKKDKVF
Trigger: GAACACTTTGTCTTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 90 bp CATCTTCTCAACAGAAACTGTTGCCTTGGAGCCAGCAGTCTGGGTTaGAACATGGCTGTTCTATCGGTGTGGCCAATTCAAGAAAGACAA +
Preference number: 5 (lower is better)
Translates to: HLLNRNCCLGASSLG*NMAVLSVWPIQERQ
Trigger: TTGTCTTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 90 bp ACAAGCATCTTCTCAACAGAAACTGTTGCCTTGGAGCCAGCAGTCTaGGTTGGAACATGGCTGTTCTATCGGTGTGGCCAATTCAAGAAA +
Preference number: 5 (lower is better)
Translates to: TSIFSTETVALEPAV*VGTWLFYRCGQFKK
Trigger: TTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS-3UTR CAA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCTTGATGTGGAAATGTTaGGTCTGGACCCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARLMWKC*VWTRST
Trigger: AGTGCTTCGGGTCCAGACCAAACATTTCCACATCAA...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGTCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTCTGTGAACATCTGGTaGCATCTGCTGCATCGTGCA +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNSVNIW*HLLHRA
Trigger: TGCACGATGCAGCAGATGCAACCAGATGTTCACAGA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGGTCCGTCTCAATCTTaGGTGTCTCGCTGGGGTCTG +
Preference number: 5 (lower is better)
Translates to: SVFRNIEISTPCFLASVTGPSQS*VSRWGL
Trigger: CAGACCCCAGCGAGACACCAAAGATTGAGACGGACC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: LWGTATVSPFSNCHSRVGHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...TCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GTGGCTTACCCTCCTGGGTGTGGAGTTACACAAACTCTCCCTCATCTAACTCACTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: VAYPPGCGVTQTLPHLTHFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...GTGAGTTAGATGAGGGAGAGTTTGTGTAACTCCACACCCAGGAGGGTAAGCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: KFGPQYDILWGTATVSPFFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...GAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: IKFGPQYDILWGTATVSPILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...AGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: ANSPIKFGPQYDILWGTALSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTCCAGACTTTCTCTTTTaGGTGTTGCTGAGCGACGGT +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTPDFLF*VLLSDG
Trigger: ACCGTCGCTCAGCAACACCAAAAAGAGAAAGTCTGG...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTGGCAAGTGTTACTGTaGGCTGGCCCGACATTTGAC +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSWQVLL*AGPTFD
Trigger: GTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGTAAATGTTGATTCCTaGATCAGGTCTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: SYGAPPLSVLSLIAIHEWVNVDS*IRSVEM
Trigger: CATTTCCACAGACCTGATCAAGGAATCAACATTTAC...CCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CAA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGAAGAACGCCGAATGTTaGGCAGCCGCAGCTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWKNAEC*AAAAFP
Trigger: AGGAAAAGCTGCGGCTGCCAAACATTCGGCGTTCTT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS-3UTR CAA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCGTGTTTTTCCTTTCTTaGCAAAGGTGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAVFFLS*QRWSSR
Trigger: TCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACAC...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGATGAAGGAAGTGATGTaGGGGTCGCAGTTTAGCCTC +
Preference number: 5 (lower is better)
Translates to: WNKQEATETPKAKLQTAVMKEVM*GSQFSL
Trigger: GAGGCTAAACTGCGACCCCAACATCACTTCCTTCAT...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: GPQYDILWGTATVSPFSNPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...ATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGAGAGCACTACTCTGCTaGCAGATAGGAGGCTACTGG +
Preference number: 5 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWRALLC*QIGGYW
Trigger: CCAGTAGCCTCCTATCTGCAAGCAGAGTAGTGCTCT...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACACCAGGATGGACATTTaGAGGACAAGCATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNTRMDI*RTSMLS
Trigger: GCTCAGCATGCTTGTCCTCAAAATGTCCATCCTGGT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 5 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNRPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNRPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTGAGTAACACGAAGCCATTCAAGAAAGGCGGGTGTGAAATCACTGCCACCCCAACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 5 (lower is better)
Translates to: LSNTKPFKKGGCEITATPTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...TGGGGTGGCAGTGATTTCACACCCGCCTTTCTTGAATGGCTTCGTGTTACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGTTGGAGATGACAGAATaGGGTAGCGGAGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQLEMTE*GSGVDA
Trigger: AGCATCTACTCCGCTACCCAATTCTGTCATCTCCAA...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATCCATATGCAAAGCATATCTGCCACCACCTCCCACTGCTTCCTGGGCCGCACATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: QSICKAYLPPPPTASWAAHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...TGCGGCCCAGGAAGCAGTGGGAGGTGGTGGCAGATATGCTTTGCATATGGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTCAAGGTCTACAGGATaGTCTCTGTCCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTSRSTG*SLSTFG
Trigger: ACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGA...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp TATGGGACAGCCCAGGAAAGGATCACTGAAAACAGACAATTTGGCTaGACAATCTTGATTCTCTGGGCAGTCTCCTTGGTCCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: YGTAQERITENRQFG*TILILWAVSLVLGL
Trigger: AAGACCAAGGACCAAGGAGACTGCCCAGAGAATCAAGATTGTTCAGCCAAATTGTCTGTTTTCAGTGATCCTTTCCTGGGCTGTCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCACAGCCACACACTTaGCAGGTGAAACACTTGATG +
Preference number: 5 (lower is better)
Translates to: WNKQEATETPKAKLQTAVSQPHT*QVKHLM
Trigger: CATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGA...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCA +
Preference number: 5 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLLGLRR*LTVGMP
Trigger: TGGCATCCCGACTGTAAGCAATCTACGAAGACCGAG...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTCTCGGTCCATTCTCATaGCAGGCATGTGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: SVFRNIEISTPCFLASVTLGPFS*QACGHL
Trigger: CAGATGGCCACATGCCTGCAATGAGAATGGACCGAG...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SLGLNMTSYGAPPLSVLSHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...AGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp ATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: ILWGTATVSPFSNCHSRVHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...CACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAILFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: SWQVLLLAGPTFDSWCFNLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...GTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: LNMTSYGAPPLSVLSLIAFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...GGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: ANSPIKFGPQYDILWGTAILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...GGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: NSPIKFGPQYDILWGTATLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...AGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGGTGTTTTTCCTTTCTTaGCAAAGGTGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQVFFLS*QRWSSR
Trigger: TCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACAC...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAGTGGGACGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: YGAPPLSVLSLIAIHEWDESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...GTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCCCTTCCTTCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: VALYIGTREACHIYNPLPSKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...AGGAAGGGGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGCACTAGTTTAGCCTCACTCTaGATCTTTGAGTCACACACA +
Preference number: 5 (lower is better)
Translates to: SLSTFGQWVQEVTHGNCTSLASL*IFESHT
Trigger: TGTGTGTGACTCAAAGATCAAGAGTGAGGCTAAACT...AGTGCAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGT +
Preference number: 5 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELKRKLS*EMTELG
Trigger: ACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAACAAAAGAGCAAGCTTaGGGGCATACTGACAAACAC +
Preference number: 5 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRTKEQA*GHTDKH
Trigger: GTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTGT...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCACAAAAGAGCAAGCTTaGGGGCATACTGACAAACAC +
Preference number: 5 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTTKEQA*GHTDKH
Trigger: GTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTGT...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTTGATGTGGAAATGTTaGGTCTGGACCCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSLMWKC*VWTRST
Trigger: AGTGCTTCGGGTCCAGACCAAACATTTCCACATCAA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTTGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LGKCYCWLARHLTHGVLTLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCCATTTGCTAAACATGTTAGTAGATCCAACACACACACACACACACACACACTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGG +
Preference number: 5 (lower is better)
Translates to: SHLLNMLVDPTHTHTHTHFGSNM*GIDTPR
Trigger: CCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAA...GTGTGTGTGTGTGTGTGTGTGTGTTGGATCTACTAACATGTTTAGCAAATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: QYDILWGTATVSPFSNCHFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...ATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGATTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAILSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: RNQTCYGKQKELREGFLSFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGTGTTTTTCCTTTCTTaGCAAAGGTGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: WNKQEATETPKAKLQTAVVFFLS*QRWSSR
Trigger: TCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACAC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: MFPNVALYIGTREACHIYQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 5 (lower is better)
Translates to: SPIKFGPQYDILWGTATVRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...GACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACGAAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 5 (lower is better)
Translates to: DILWGTATVSPFSNCHSRRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...TCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCTGGCCACCATTGTTATaGACAGGTAAGGAAGCACTG +
Preference number: 5 (lower is better)
Translates to: NQTCYGKQKELREGFLSFWPPLL*TGKEAL
Trigger: CAGTGCTTCCTTACCTGTCAATAACAATGGTGGCCA...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAATGTGCAGGCATTCTAGCCCACACATTCAATCTGGCAGTTAGCAGGAACCAGACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 5 (lower is better)
Translates to: KCAGILAHTFNLAVSRNQTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...CTGGTTCCTGCTAACTGCCAGATTGAATGTGTGGGCTAGAATGCCTGCACATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAACAAGCTCCACCAGTTaGAGTGTGTTAATAACTGGA +
Preference number: 5 (lower is better)
Translates to: GKCYCWLARHLTHGVLTRTSSTS*SVLITG
Trigger: TCCAGTTATTAACACACTCAAACTGGTGGAGCTTGT...TCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGTTGGAGATGACAGAATaGGGTAGCGGAGTAGATGCT +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMLEMTE*GSGVDA
Trigger: AGCATCTACTCCGCTACCCAATTCTGTCATCTCCAA...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGT +
Preference number: 5 (lower is better)
Translates to: RNQTCYGKQKELREGFLSKRKLS*EMTELG
Trigger: ACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGT +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIKRKLS*EMTELG
Trigger: ACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTT...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCAGTCTCCGAGTTAGAGTaGATTGATATACTGGATTGG +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSVSELE*IDILDW
Trigger: CCAATCCAGTATATCAATCAACTCTAACTCGGAGAC...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACGTCTCCGAGTTAGAGTaGATTGATATACTGGATTGG +
Preference number: 5 (lower is better)
Translates to: MFPNVALYIGTREACHIYVSELE*IDILDW
Trigger: CCAATCCAGTATATCAATCAACTCTAACTCGGAGAC...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ACTCTCCCTCATCTAACTCACGTCGGGAATCATGATGTGGTTTCATATGCACGCGTCTCCGAGTTAGAGTaGATTGATATACTGGATTGG +
Preference number: 5 (lower is better)
Translates to: TLPHLTHVGNHDVVSYARVSELE*IDILDW
Trigger: CCAATCCAGTATATCAATCAACTCTAACTCGGAGAC...GCGTGCATATGAAACCACATCATGATTCCCGACGTGAGTTAGATGAGGGAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTACAAAAGAGCAAGCTTaGGGGCATACTGACAAACAC +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTTKEQA*GHTDKH
Trigger: GTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTGT...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTTGTCTCTGTCCACCTTaGGTCAATGGGTTCAGGAAG +
Preference number: 5 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCCLCPP*VNGFRK
Trigger: CTTCCTGAACCCATTGACCAAAGGTGGACAGAGACA...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTCAAGGTCTACAGGATaGTCTCTGTCCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSSRSTG*SLSTFG
Trigger: ACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGTCAAGGTCTACAGGATaGTCTCTGTCCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMSRSTG*SLSTFG
Trigger: ACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGA...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS TCA 90 bp CCCAGGAAAGGATCACTGAAAACAGACAATTTGGCTGAACAATCTTaGTTCTCTGGGCAGTCTCCTTGGTCCTTGGTCTTTTCTAAATGG +
Preference number: 5 (lower is better)
Translates to: PRKGSLKTDNLAEQS*FSGQSPWSLVFSKW
Trigger: CCATTTAGAAAAGACCAAGGACCAAGGAGACTGCCCAGAGAATCAAGATTGTTCAGCCAAATTGTCTGTTTTCAGTGATCCTTTCCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS CCA 90 bp GTCATCATAGCCCGAAGTGTAGAAAGGCTCATAGGTAATAAGATCTaGACGTTCAATGTCATAAATTGCCTTGACCTTCGGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: VIIARSVERLIGNKI*TFNVINCLDLRNGC
Trigger: GCAGCCATTCCGAAGGTCAAGGCAATTTATGACATTGAACGTCCAGATCTTATTACCTATGAGCCTTTCTACACTTCGGGCTATGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 90 bp TTTCTAAATGGTCTAGAAGTTTCTTTGCAGGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACCCGAAGCACTTCACCCTTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: FLNGLEVSLQVKHLM*KCLVWTRSTSPLQG
Trigger: GCCTTGCAAGGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAGTGTTTCACCTGCAAAGAAACTTCTAGACCATTTAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTGGGCTGCTGGGAACTaGGAAAACTTGATGATATCT +
Preference number: 5 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCWAAGN*ENLMIS
Trigger: AGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCA...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: YDILWGTATVSPFSNCHSHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...TGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp AGGAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCAATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: RNQTCYGKQKELREGFLSILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...TGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: VLLSDGSLQILQSSLGLNILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...ATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: NQTCYGKQKELREGFLSFLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GCTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTGAGCGACGGTAGTTaGCAAATTCTCCAATCAAGT +
Preference number: 5 (lower is better)
Translates to: AHMWTLLCVSEHRNFYAMLSDGS*QILQSS
Trigger: ACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAG...CATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTGGCTGGCCCGACATTaGACTCATGGTGTTTTAACC +
Preference number: 5 (lower is better)
Translates to: YSVFRNIEISTPCFLASVWLARH*THGVLT
Trigger: GGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTGTGTTTTTCCTTTCTTaGCAAAGGTGGAGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIVFFLS*QRWSSR
Trigger: TCTGGAGCTCCACCTTTGCAAAGAAAGGAAAAACAC...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAATCCAGAACTTCAGAGCTTTaGTTCTTAGTGGCATATGAA +
Preference number: 5 (lower is better)
Translates to: PKCSPLHRHQGSLPYIQSRTSEL*FLVAYE
Trigger: TTCATATGCCACTAAGAACAAAAGCTCTGAAGTTCT...GGATTGTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCACCATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: MTSYGAPPLSVLSLIAIHHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...GTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGCCTCAATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTCATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: GLNMTSYGAPPLSVLSLIHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...AATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATCCAAACGGTGGAGCCTaGAAGATACATTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHPNGGA*KIHFLS
Trigger: GGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGG...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AATATGACATCCTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTGCCATTCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: NMTSYGAPPLSVLSLIAIHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...AATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAGGATGTCATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS-3UTR CAA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTTTGTTTCGCCCTCTGTaGGTCACCATGAGCATTTCA +
Preference number: 5 (lower is better)
Translates to: SVFRNIEISTPCFLASVTLFRPL*VTMSIS
Trigger: TGAAATGCTCATGGTGACCAACAGAGGGCGAAACAA...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: LTCGHYSVFRNIEISTPCFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...GCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTTTCTCTTTTTGGTGTaGCTGAGCGACGGTAGTTTG +
Preference number: 5 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGFLFLV*LSDGSL
Trigger: CAAACTACCGTCGCTCAGCAACACCAAAAAGAGAAA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTGTAAATGTTGATTCCTaGATCAGGTCTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTVNVDS*IRSVEM
Trigger: CATTTCCACAGACCTGATCAAGGAATCAACATTTAC...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CAA 90 bp AACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCCAATCTGGGGGCAATTaGTGTTTTTCCTTTCTTTGC +
Preference number: 5 (lower is better)
Translates to: NQTCYGKQKELREGFLSFQSGGN*CFSFLC
Trigger: GCAAAGAAAGGAAAAACACAAATTGCCCCCAGATTG...GAATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: YCWLARHLTHGVLTRLSLPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...AAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCAGTAAGCAGCTCACATCTTTCTGAATGTCAAGGTCTACAGGATTGTCTCTGTAAGAGGAAACTCAGCTaGGAGATGACAGAATTGGGT +
Preference number: 5 (lower is better)
Translates to: SVSSSHLSECQGLQDCLCKRKLS*EMTELG
Trigger: ACCCAATTCTGTCATCTCCAAGCTGAGTTTCCTCTT...ACAGAGACAATCCTGTAGACCTTGACATTCAGAAAGATGTGAGCTGCTTACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGCAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGAAAAGAACATCAGTTTaGTGGACAATGGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WQVLLLAGPTFDSWCFNQKRTSV*WTMVSS
Trigger: AGAGGAAACCATTGTCCACAAAACTGATGTTCTTTT...CTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATGTTCCCAAATGTAGCCCTTTACATCGGCACCAGGGAAGCCTGCCATATATACAAAAGAACATCAGTTTaGTGGACAATGGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: MFPNVALYIGTREACHIYKRTSV*WTMVSS
Trigger: AGAGGAAACCATTGTCCACAAAACTGATGTTCTTTT...GTATATATGGCAGGCTTCCCTGGTGCCGATGTAAAGGGCTACATTTGGGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp ATTGTCTCTGTCCACCTTTGGTCAATGGGTTCAGGAAGTGACTCATGGGAACTGAAAAGAACATCAGTTTaGTGGACAATGGTTTCCTCT +
Preference number: 5 (lower is better)
Translates to: IVSVHLWSMGSGSDSWELKRTSV*WTMVSS
Trigger: AGAGGAAACCATTGTCCACAAAACTGATGTTCTTTT...CAGTTCCCATGAGTCACTTCCTGAACCCATTGACCAAAGGTGGACAGAGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS CCA 90 bp ATTTGGCTGAACAATCTTGATTCTCTGGGCAGTCTCCTTGGTCCTTaGTCTTTTCTAAATGGTCTAGAAGTTTCTTTGCAGGTGAAACAC +
Preference number: 5 (lower is better)
Translates to: IWLNNLDSLGSLLGP*SFLNGLEVSLQVKH
Trigger: GTGTTTCACCTGCAAAGAAACTTCTAGACCATTTAGAAAAGACCAAGGACCAAGGAGACTGCCCAGAGAATCAAGATTGTTCAGCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTTTCTCTTTTTGGCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: LAGPTFDSWCFNQTFSFWHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...CCAAAAAGAGAAAGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GAACCAGACCTGCTATGGGAAGCAGAAAGAGTTAAGGGAAGGTTTCCTTTCATTCATATGGAAATATCTTaGGTTCCAACATGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: EPDLLWEAERVKGRFPFIHMEIS*VPTCWA
Trigger: TGCCCAACATGTTGGAACCAAAGATATTTCCATATG...AATGAAAGGAAACCTTCCCTTAACTCTTTCTGCTTCCCATAGCAGGTCTGGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CTCTTTTTGGTGTTGCTGAGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: LFLVLLSDGSLQILQSSLFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...CAAACTTGATTGGAGAATTTGCAAACTACCGTCGCTCAGCAACACCAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGTTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: GSLQILQSSLGLNMTSYGFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...CCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp GGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGTGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: GISKKPLRHQRLNCKLQCESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...ACACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TGGAATAAGCAAGAAGCCACTGAGACACCAAAGGCTAAACTGCAAACTGCAGTGGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: WNKQEATETPKAKLQTAVESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...CACTGCAGTTTGCAGTTTAGCCTTTGGTGTCTCAGTGGCTTCTTGCTTATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGCGACGGTAGTTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTCGAAGGAGTCTACTTaGGAGTTGCAGAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: SDGSLQILQSSLGLNMTSSKEST*ELQRFK
Trigger: TTTAAATCTCTGCAACTCCAAAGTAGACTCCTTCGA...GGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAACTACCGTCGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTAGTTTAGCCTCACTCTaGATCTTTGAGTCACACACA +
Preference number: 5 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLSLASL*IFESHT
Trigger: TGTGTGTGACTCAAAGATCAAGAGTGAGGCTAAACT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTAGACCAATAGCCATCTaGTGTGCTGTGACCAGGATG +
Preference number: 5 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVRPIAI*CAVTRM
Trigger: CATCCTGGTCACAGCACACAAGATGGCTATTGGTCT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp CAAGTGTTACTGTTGGCTGGCCCGACATTTGACTCATGGTGTTTTAACCAGACTATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: QVLLLAGPTFDSWCFNQTINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...AGTCTGGTTAAAACACCATGAGTCAAATGTCGGGCCAGCCAACAGTAACACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTTTGCAGGTGAAACACTaGATGTGGAAATGTTTGGTC +
Preference number: 5 (lower is better)
Translates to: YSVFRNIEISTPCFLASVLQVKH*MWKCLV
Trigger: GACCAAACATTTCCACATCAAGTGTTTCACCTGCAA...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGATTTTTCTTCATGTCGTaGCGTCTCCAAAGAGGTAAC +
Preference number: 5 (lower is better)
Translates to: LNILIAKSFASQVPVNSRFFFMS*RLQRGN
Trigger: GTTACCTCTTTGGAGACGCAACGACATGAAGAAAAA...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTATTCTCCAATCAAGTTaGGGCCTCAATATGACATCC +
Preference number: 5 (lower is better)
Translates to: SVFRNIEISTPCFLASVTILQSS*GLNMTS
Trigger: GGATGTCATATTGAGGCCCAAACTTGATTGGAGAAT...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTCCCTGTCAGAGCCATTaGCTAAACATGTTAGTAGAT +
Preference number: 5 (lower is better)
Translates to: YSVFRNIEISTPCFLASVPCQSH*LNMLVD
Trigger: ATCTACTAACATGTTTAGCAAATGGCTCTGACAGGG...AACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AGAACATCAGTTTTGTGGACAATGGTTTCCTCTGCTGTAAAGAAACGTATGCATACAAAAGAGCAAGCTTaGGGGCATACTGACAAACAC +
Preference number: 5 (lower is better)
Translates to: RTSVLWTMVSSAVKKRMHTKEQA*GHTDKH
Trigger: GTGTTTGTCAGTATGCCCCAAAGCTTGCTCTTTTGT...ATGCATACGTTTCTTTACAGCAGAGGAAACCATTGTCCACAAAACTGATGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTTGCAAATTCTCCAATCAAGTTTGGGCCTCAATATGACATCCTATGGGGCACCCATCATTGCTATAAGTaGGTATCACTGCAAATCTCA +
Preference number: 5 (lower is better)
Translates to: FANSPIKFGPQYDILWGTHHCYK*VSLQIS
Trigger: TGAGATTTGCAGTGATACCAACTTATAGCAATGATG...GGTGCCCCATAGGATGTCATATTGAGGCCCAAACTTGATTGGAGAATTTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTTCAAGGTCTACAGGATaGTCTCTGTCCACCTTTGGT +
Preference number: 5 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVSRSTG*SLSTFG
Trigger: ACCAAAGGTGGACAGAGACAATCCTGTAGACCTTGA...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTCTTGGCAAGTGTTACTGTAAATGTTGATTCCTaGATCAGGTCTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: SVFRNIEISTPCFLASVTVNVDS*IRSVEM
Trigger: CATTTCCACAGACCTGATCAAGGAATCAACATTTAC...AGTAACACTTGCCAAGAAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS-3UTR CAA 90 bp CACATGTGGACACTACTCTGTGTTTCGGAACATAGAAATTTCTACGCCATGCTTATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: HMWTLLCVSEHRNFYAMLINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...AAGCATGGCGTAGAAATTTCTATGTTCCGAAACACAGAGTAGTGTCCACATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp TTAAATATACTAATAGCTAAGTCATTTGCCAGCCAGGTCCCGGTGAACAGTAGAGAGTCTACTTTGGAGTaGCAGAGATTTAAAAGAGAA +
Preference number: 5 (lower is better)
Translates to: LNILIAKSFASQVPVNSRESTLE*QRFKRE
Trigger: TTCTCTTTTAAATCTCTGCAACTCCAAAGTAGACTC...TCTACTGTTCACCGGGACCTGGCTGGCAAATGACTTAGCTATTAGTATATTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS-3UTR CAA 90 bp AAGAAAGCTGAAAAGGCCAAATTAAATACGTTCGAAGGAGTCTACTTTGGAGTTATTAACTCTATCTCTTaGAGGTTTTGGAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: KKAEKAKLNTFEGVYFGVINSIS*RFWRTG
Trigger: TCCTGTTCTCCAAAACCTCAAAGAGATAGAGTTAAT...AACTCCAAAGTAGACTCCTTCGAACGTATTTAATTTGGCCTTTTCAGCTTTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
CDS CCA 72 bp GTGGAAGCGCGCCTCGGCAGACAGATCCGCGGGCGCTaGGGCAGCCAGGAGAAGCCCCGGCATCCGCTTGTG +
Preference number: 6 (lower is better)
Translates to: VEARLGRQIRGR*GSQEKPRHPLV
Trigger: CACAAGCGGATGCCGGGGCTTCTCCTGGCTGCCCCAGCGCCCGCGGATCTGTCTGCCGAGGCGCGCTTCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS GCA 72 bp GAACCACAACGCCCGGTGCCCACTGAAAGGAACGCGTaGCCGCGCCCAGCCTTACTTGCTGATGTACTCCCC +
Preference number: 6 (lower is better)
Translates to: EPQRPVPTERNA*PRPALLADVLP
Trigger: GGGGAGTACATCAGCAAGTAAGGCTGGGCGCGGGCACGCGTTCCTTTCAGTGGGCACCGGGCGTTGTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481974.1
CDS GCA 72 bp TACACCTGGCCTGGTTCATGCAGTGTCCCCAAGGCCTaGAGGGACAGCTTGACCCAGGCACCAGGCATGTCT +
Preference number: 6 (lower is better)
Translates to: YTWPGSCSVPKA*RDSLTQAPGMS
Trigger: AGACATGCCTGGTGCCTGGGTCAAGCTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 72 bp CTGTGGCGGCTGTACACAGGGGAGTTGATGGAGCCCTaGCTCGTGGACCGATGGATCATCCGATCCCGAACA +
Preference number: 6 (lower is better)
Translates to: LWRLYTGELMEP*LVDRWIIRSRT
Trigger: TGTTCGGGATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp CAAGGCCAAAGCAAGAGAGACCCCCTACACCTGGCCTaGTTCATGCAGTGTCCCCAAGGCCTGCAGGGACAG +
Preference number: 6 (lower is better)
Translates to: QGQSKRDPLHLA*FMQCPQGLQGQ
Trigger: CTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTAGGGGGTCTCTCTTGCTTTGGCCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 72 bp CTCTCCAAGGCCAAAGCAAGAGAGACCCCCTACACCTaGCCTGGTTCATGCAGTGTCCCCAAGGCCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LSKAKARETPYT*PGSCSVPKACR
Trigger: CCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGTGTAGGGGGTCTCTCTTGCTTTGGCCTTGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CAA 72 bp CAGGTCTGTGGAAATGCTGGGGAGAGCGGGACGTGGTaGGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGT +
Preference number: 6 (lower is better)
Translates to: QVCGNAGESGTW*ECSCGGCTQGS
Trigger: ACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS TCA 72 bp TTGGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTTaGTGGAGCCCTGGCTCGTGGACCGATGGATCATCC +
Preference number: 6 (lower is better)
Translates to: LECSCGGCTQGS*WSPGSWTDGSS
Trigger: GGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS GCA 72 bp ACCTTCCCGCAGGACTTGCATTTAAAGCACCCCAAGTaGCACTGCTTATCCAGCGCCAGCAGCGCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: TFPQDLHLKHPK*HCLSSASSACP
Trigger: TGGGCAGGCGCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS GCA 72 bp TGCCAGACCTCAGCCCGACAGACTGAGGCTCCCACCTaGCTGGGTTACATATCAGGCTTCTCTCCGAAGCTC +
Preference number: 6 (lower is better)
Translates to: CQTSARQTEAPT*LGYISGFSPKL
Trigger: GAGCTTCGGAGAGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAGGTCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000392952.7
ENST00000428430.1
CDS CCA 72 bp AGGTCTGTGGAAATGCTGGGGAGAGCGGGACGTGGTTaGAGTGTAGCTGTGGCGGCTGTACACAGGGGAGTT +
Preference number: 6 (lower is better)
Translates to: RSVEMLGRAGRG*SVAVAAVHRGV
Trigger: AACTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp AGACCTCAGCCCGACAGACTGAGGCTCCCACCTGCCTaGGTTACATATCAGGCTTCTCTCCGAAGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: RPQPDRLRLPPA*VTYQASLRSSA
Trigger: AGCCGAGCTTCGGAGAGAAGCCTGATATGTAACCCAGGCAGGTGGGAGCCTCAGTCTGTCGGGCTGAGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392952.7
ENST00000428430.1
CDS CCA 72 bp AGGACTGAAGAAGGAACGAGGAATAAACTCTGGGAGTaGAAGCGCGCCTCGGCAGACAGATCCGCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: RTEEGTRNKLWE*KRASADRSAGA
Trigger: AGCGCCCGCGGATCTGTCTGCCGAGGCGCGCTTCCACTCCCAGAGTTTATTCCTCGTTCCTTCTTCAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS CAA 90 bp ACCTGGCCTGGTTCATGCAGTGTCCCCAAGGCCTGCAGGGACAGCTaGACCCAGGCACCAGGCATGTCTGCTCTTCACGGCTATAGAGTA +
Preference number: 6 (lower is better)
Translates to: TWPGSCSVPKACRDS*TQAPGMSALHGYRV
Trigger: TACTCTATAGCCGTGAAGAGCAGACATGCCTGGTGCCTGGGTCAAGCTGTCCCTGCAGGCCTTGGGGACACTGCATGAACCAGGCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS GCA 72 bp TATCAGGCTTCTCTCCGAAGCTCGGCTAAGGCAACGTaGATCCCTCTAGAGACGCACTCCGGAAACCAGCCC +
Preference number: 6 (lower is better)
Translates to: YQASLRSSAKAT*IPLETHSGNQP
Trigger: GGGCTGGTTTCCGGAGTGCGTCTCTAGAGGGATGCACGTTGCCTTAGCCGAGCTTCGGAGAGAAGCCTGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000392952.7
ENST00000428430.1
CDS GCA 72 bp GGGCTGAGGCTGCTGGTGCGCAGGTACGACAACCTCTaGACACCAGGAGACAAAAGCTCAGGTCTGTGGAAA +
Preference number: 6 (lower is better)
Translates to: GLRLLVRRYDNL*TPGDKSSGLWK
Trigger: TTTCCACAGACCTGAGCTTTTGTCTCCTGGTGTGCAGAGGTTGTCGTACCTGCGCACCAGCAGCCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS CCA 72 bp ACAGGGGAGTTGATGGAGCCCTGGCTCGTGGACCGATaGATCATCCGATCCCGAACATCCTGGTACCCTTCT +
Preference number: 6 (lower is better)
Translates to: TGELMEPWLVDR*IIRSRTSWYPS
Trigger: AGAAGGGTACCAGGATGTTCGGGATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000428430.1
ENST00000440467.5
ENST00000466400.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp TCCTCGGTCCATTCTCATTGCAGGCATGTGGCCATCTaGGAGTGTCTGGTAATCTCGCACTCCCCCGCTGAC +
Preference number: 6 (lower is better)
Translates to: SSVHSHCRHVAI*ECLVISHSPAD
Trigger: GTCAGCGGGGGAGTGCGAGATTACCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000649363.1
CDS CCA 72 bp TCCTCGGTCCATTCTCATTGCAGGCATGTGGCCATCTaGGAGTGTCTGGAAATCTCGCACTCCCCCGCTGAC +
Preference number: 6 (lower is better)
Translates to: SSVHSHCRHVAI*ECLEISHSPAD
Trigger: GTCAGCGGGGGAGTGCGAGATTTCCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS CCA 72 bp ACGAGCAGGACTGAAGAAGGAACGAGGAATAAACTCTaGGAGTGGAAGCGCGCCTCGGCAGACAGATCCGCG +
Preference number: 6 (lower is better)
Translates to: TSRTEEGTRNKL*EWKRASADRSA
Trigger: CGCGGATCTGTCTGCCGAGGCGCGCTTCCACTCCCAGAGTTTATTCCTCGTTCCTTCTTCAGTCCTGCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651023.1
CDS CAA 72 bp CCTGGTAGGCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: PGRPQLFLGLRR*LTVGMPNGGAL
Trigger: CAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGCCTACCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000392955.7
ENST00000428430.1
ENST00000533213.6
ENST00000651023.1
ENST00000651092.1
CDS TCA 72 bp AGGAAGGCAGGCATCTTGGCATGGATTTCCAAGCAATaGGAAATGGGGAGTGGGGACCCAAGGAGCGGTGCT +
Preference number: 6 (lower is better)
Translates to: RKAGILAWISKQ*EMGSGDPRSGA
Trigger: AGCACCGCTCCTTGGGTCCCCACTCCCCATTTCTCATTGCTTGGAAATCCATGCCAAGATGCCTGCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS TCA 72 bp CTCCCCACATTTATGGCAGTGAATGACAGGCTTCTCTaGTGGGTGGTGAGGGTCCTGAGGGTGGGCCACAAA +
Preference number: 6 (lower is better)
Translates to: LPTFMAVNDRLL*WVVRVLRVGHK
Trigger: TTTGTGGCCCACCCTCAGGACCCTCACCACCCATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS TCA 72 bp CATCTGGGAGTGTCTGGTAATCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTATACTGAGCGAAGTCGG +
Preference number: 6 (lower is better)
Translates to: HLGVSGNLALPR*HPHSCYTERSR
Trigger: CCGACTTCGCTCAGTATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAGATTACCAGACACTCCCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000369253.6
ENST00000369256.6
ENST00000392952.7
ENST00000392955.7
ENST00000649363.1
CDS TCA 72 bp CATCTGGGAGTGTCTGGAAATCTCGCACTCCCCCGCTaGCATCCCCATAGCTGTTATACTGAGCGAAGTCGG +
Preference number: 6 (lower is better)
Translates to: HLGVSGNLALPR*HPHSCYTERSR
Trigger: CCGACTTCGCTCAGTATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAGATTTCCAGACACTCCCAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS GCA 72 bp CTGAGTGACTCTGGCTCCTTCCTCATGTACAGATTCTaGATCCCCTTCTTCTCTCGACCCTGCCCCTACCAC +
Preference number: 6 (lower is better)
Translates to: LSDSGSFLMYRF*IPFFSRPCPYH
Trigger: GTGGTAGGGGCAGGGTCGAGAGAAGAAGGGGATGCAGAATCTGTACATGAGGAAGGAGCCAGAGTCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000533213.6
CDS CCA 72 bp TATCTCTTCCGCAGCCGGCACAATTGCTGGAGAAGGTaGTTTCTTTCGGACTGGACGACATCGGCTGTGCAC +
Preference number: 6 (lower is better)
Translates to: YLFRSRHNCWRR*FLSDWTTSAVH
Trigger: GTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGGAAGAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp GTGGTCCGTCTCAATCTTTGGTGTCTCGCTGGGGTCTaGTGCCTGGGCTGCTGGGAACTTGGAAAACTTGAT +
Preference number: 6 (lower is better)
Translates to: VVRLNLWCLAGV*CLGCWELGKLD
Trigger: ATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAGACACCAAAGATTGAGACGGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CAA 72 bp GGGTCTGGTGCCTGGGCTGCTGGGAACTTGGAAAACTaGATGATATCTTCTGAGGACTTGCTCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GSGAWAAGNLEN*MISSEDLLWAA
Trigger: GGCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CAA 72 bp GTTTGGCAGCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: VWQPQLFLGLRR*LTVGMPNGGAL
Trigger: CAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGCTGCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS CAA 90 bp GAAGGTGGTTTCTTTCGGACTGGACGACATCGGCTGTGCACAGAGTaGACAAAGGCAGTCTCTCCCATTGAATGTGACTCGGTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: EGGFFRTGRHRLCTE*TKAVSPIECDSVSG
Trigger: CCCGGAGACCGAGTCACATTCAATGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp GCAGTCTCTCCCATTGAATGTGACTCGGTCTCCGGGTaGAAACGGGCGCTTGCAGATAGTACAAGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: AVSPIECDSVSG*KRALADSTSKA
Trigger: TGCTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTCACATTCAATGGGAGAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp CGGCACAATTGCTGGAGAAGGTGGTTTCTTTCGGACTaGACGACATCGGCTGTGCACAGAGTTGACAAAGGC +
Preference number: 6 (lower is better)
Translates to: RHNCWRRWFLSD*TTSAVHRVDKG
Trigger: GCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTCTCCAGCAATTGTGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp ATAGACACTCCTCGGTCCATTCTCATTGCAGGCATGTaGCCATCTGGGAGTGTCTGGAAATCTCGCACTCCC +
Preference number: 6 (lower is better)
Translates to: IDTPRSILIAGM*PSGSVWKSRTP
Trigger: GGGAGTGCGAGATTTCCAGACACTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGAGTGTCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369266.7
ENST00000533213.6
CDS CAA 90 bp CGAGGATGTCCTGGTAGGCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTGAAGATACAT +
Preference number: 6 (lower is better)
Translates to: RGCPGRPQLFLGLRR*LTVGMPNGGALKIH
Trigger: ATGTATCTTCAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGCCTACCAGGACATCCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277895.9
ENST00000392955.7
ENST00000428430.1
ENST00000533213.6
ENST00000651023.1
ENST00000651092.1
CDS TCA 72 bp TCTTTCGGACTGGACGACATCGGCTGTGCACAGAGTTaGCAAAGGCAGTCTCTCCCATTGAATGTGACTCGG +
Preference number: 6 (lower is better)
Translates to: SFGLDDIGCAQS*QRQSLPLNVTR
Trigger: CCGAGTCACATTCAATGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS TCA 72 bp GGCTGCTGGGAACTTGGAAAACTTGATGATATCTTCTaGGGACTTGCTCTGGGCTGCCAAGGCAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: GCWELGKLDDIF*GLALGCQGSCI
Trigger: GATGCAGCTGCCTTGGCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS CAA 72 bp TACTTTTGCCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTG +
Preference number: 6 (lower is better)
Translates to: YFCPQLFLGLRR*LTVGMPNGGAL
Trigger: CAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGGCAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369253.6
ENST00000369266.7
CDS CAA 72 bp TCCGAGGATGTCCTGGTAGGCTGCCTTGGGTTTTTGTaGAAGTTCACTAGACAAGGTGGGGATAACAGCCGC +
Preference number: 6 (lower is better)
Translates to: SEDVLVGCLGFL*KFTRQGGDNSR
Trigger: GCGGCTGTTATCCCCACCTTGTCTAGTGAACTTCAACAAAAACCCAAGGCAGCCTACCAGGACATCCTCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649363.1
CDS CAA 90 bp ACGCCGAATGTTTGGCAGCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTGAAGATACAT +
Preference number: 6 (lower is better)
Translates to: TPNVWQPQLFLGLRR*LTVGMPNGGALKIH
Trigger: ATGTATCTTCAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGCTGCCAAACATTCGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS CAA 90 bp GTCCAGGGTGCAGAGATACTCTCCGTTCTTTATGAAGAAGCCCCCTaGTGCCAGGTCACAGCCACACACTTTGCAGGTGAAACACTTGAT +
Preference number: 6 (lower is better)
Translates to: VQGAEILSVLYEEAP*CQVTATHFAGETLD
Trigger: ATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTCATAAAGAACGGAGAGTATCTCTGCACCCTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS GCA 72 bp GAAGGTGGTTTCTTTCGGACTGGACGACATCGGCTGTaGACAGAGTTGACAAAGGCAGTCTCTCCCATTGAA +
Preference number: 6 (lower is better)
Translates to: EGGFFRTGRHRL*TELTKAVSPIE
Trigger: TTCAATGGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000481974.1
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp ACTGTTGCCTTGGAGCCAGCAGTCTGGGTTGGAACATaGCTGTTCTATCGGTGTGGCCAATTCAAGAAAGAC +
Preference number: 6 (lower is better)
Translates to: TVALEPAVWVGT*LFYRCGQFKKD
Trigger: GTCTTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS GCA 72 bp GAGATACTCTCCGTTCTTTATGAAGAAGCCCCCTTGTaGCAGGTCACAGCCACACACTTTGCAGGTGAAACA +
Preference number: 6 (lower is better)
Translates to: EILSVLYEEAPL*QVTATHFAGET
Trigger: TGTTTCACCTGCAAAGTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTCATAAAGAACGGAGAGTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp CACAAAAGGATCAACGCTGTTACATACACGCCCACGTaGGCAGTAGTCCTTGGGACAGAGATACAGCAAATG +
Preference number: 6 (lower is better)
Translates to: HKRINAVTYTPT*AVVLGTEIQQM
Trigger: CATTTGCTGTATCTCTGTCCCAAGGACTACTGCCCACGTGGGCGTGTATGTAACAGCGTTGATCCTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000277895.9
ENST00000649363.1
CDS CCA 72 bp CTGGGCTGCCAAGGCAGCATGCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGATTCCTTGATCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LGCQGSMLFVDG*LSVNVDSLIWN
Trigger: GTTCCAGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGCTGCCTTGGCAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CCA 72 bp CTGGGCTGCCAAGGCAGCATGCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGATTCCTTGATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: LGCQGSMLFVDG*LSVNVDSLIRS
Trigger: AGACCTGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGCTGCCTTGGCAGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
CDS CCA 72 bp AACAGAAACTGTTGCCTTGGAGCCAGCAGTCTGGGTTaGAACATGGCTGTTCTATCGGTGTGGCCAATTCAA +
Preference number: 6 (lower is better)
Translates to: NRNCCLGASSLG*NMAVLSVWPIQ
Trigger: TTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 72 bp CCACAACAAGCATCTTCTCAACAGAAACTGTTGCCTTaGAGCCAGCAGTCTGGGTTGGAACATGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: PQQASSQQKLLP*SQQSGLEHGCS
Trigger: AGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CAA 72 bp GATCAACCACAACAAGCATCTTCTCAACAGAAACTGTaGCCTTGGAGCCAGCAGTCTGGGTTGGAACATGGC +
Preference number: 6 (lower is better)
Translates to: DQPQQASSQQKL*PWSQQSGLEHG
Trigger: GCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGTTGTGGTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CAA 90 bp CTCATTGTCTACTTTTGCCCGCAGCTTTTCCTCGGTCTTCGTAGATaGCTTACAGTCGGGATGCCAAACGGTGGAGCCTTGAAGATACAT +
Preference number: 6 (lower is better)
Translates to: LIVYFCPQLFLGLRR*LTVGMPNGGALKIH
Trigger: ATGTATCTTCAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGGCAAAAGTAGACAATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369253.6
ENST00000369266.7
CDS CAA 90 bp GAGAGATCAACCACAACAAGCATCTTCTCAACAGAAACTGTTGCCTaGGAGCCAGCAGTCTGGGTTGGAACATGGCTGTTCTATCGGTGT +
Preference number: 6 (lower is better)
Translates to: ERSTTTSIFSTETVA*EPAVWVGTWLFYRC
Trigger: ACACCGATAGAACAGCCATGTTCCAACCCAGACTGCTGGCTCCAAGGCAACAGTTTCTGTTGAGAAGATGCTTGTTGTGGTTGATCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS TCA 72 bp CCACTTTGTAGTCTCCCATGGTGTGATGAGGGTCCGTaGGCTCAGTCATTTCCAAGGTCATTAACATGCACA +
Preference number: 6 (lower is better)
Translates to: PLCSLPWCDEGP*AQSFPRSLTCT
Trigger: TGTGCATGTTAATGACCTTGGAAATGACTGAGCTCACGGACCCTCATCACACCATGGGAGACTACAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392955.7
ENST00000533213.6
CDS GCA 72 bp CTATGGGGCACCGCCACTGTCAGTCCTTTCTCTAATTaGCATTCACGAGTGGGACTTAGAAGAGTTTTGCTT +
Preference number: 6 (lower is better)
Translates to: LWGTATVSPFSN*HSRVGLRRVLL
Trigger: AAGCAAAACTCTTCTAAGTCCCACTCGTGAATGGCAATTAGAGAAAGGACTGACAGTGGCGGTGCCCCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CCA 72 bp CTCAATGACGCCACACCCACTGAAAACACTCGTTTCTaGGAAGCCACTATTAGAACACGCCAAGAATGTTCC +
Preference number: 6 (lower is better)
Translates to: LNDATPTENTRF*EATIRTRQECS
Trigger: GGAACATTCTTGGCGTGTTCTAATAGTGGCTTCCCAGAAACGAGTGTTTTCAGTGGGTGTGGCGTCATTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS TCA 72 bp CCCAGGCCTGAGTTAAGCTTCATTAATTGCTCTTCTTaGAGCTGCCGACGTCTCAGAAGTTCCTCATCATCT +
Preference number: 6 (lower is better)
Translates to: PRPELSFINCSS*SCRRLRSSSSS
Trigger: AGATGATGAGGAACTTCTGAGACGTCGGCAGCTTCAAGAAGAGCAATTAATGAAGCTTAACTCAGGCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
ENST00000651023.1
ENST00000651092.1
CDS TCA 72 bp GGTTCCTTTTCTTCTAATTCTGTTCCTTGGCTGTGCTaGGCAGAGAACTCCTCCAGGCTTCAAGTTCAGAAC +
Preference number: 6 (lower is better)
Translates to: GSFSSNSVPWLC*AENSSRLQVQN
Trigger: GTTCTGAACTTGAAGCCTGGAGGAGTTCTCTGCTCAGCACAGCCAAGGAACAGAATTAGAAGAAAAGGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000428430.1
CDS TCA 72 bp CATGCTGTTTGTAGATGGGTGGCTTTCGGTAAATGTTaGTTCCTTGATCAGGTCTGTGGAAATGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: HAVCRWVAFGKC*FLDQVCGNAGE
Trigger: CTCCCCAGCATTTCCACAGACCTGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369253.6
ENST00000369266.7
ENST00000392952.7
ENST00000440467.5
CDS TCA 72 bp AAGGCCCATTTCCTGCTGTGGCAAGTGGCAGCTACTTaGAGCTACATACACAGTTACCCAGTCATTAGTTGT +
Preference number: 6 (lower is better)
Translates to: KAHFLLWQVAAT*SYIHSYPVISC
Trigger: ACAACTAATGACTGGGTAACTGTGTATGTAGCTTCAAGTAGCTGCCACTTGCCACAGCAGGAAATGGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS TCA 72 bp GCCCAGGAAAGGATCACTGAAAACAGACAATTTGGCTaGACAATCTTGATTCTCTGGGCAGTCTCCTTGGTC +
Preference number: 6 (lower is better)
Translates to: AQERITENRQFG*TILILWAVSLV
Trigger: GACCAAGGAGACTGCCCAGAGAATCAAGATTGTTCAGCCAAATTGTCTGTTTTCAGTGATCCTTTCCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS CCA 72 bp TGCGTCTCCAAAGAGGTAACCTGTCAAACTCCTGTATaGACATTCCAAAGATTTCCCGAAACACTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: CVSKEVTCQTPV*TFQRFPETLQG
Trigger: CCCCTGAAGTGTTTCGGGAAATCTTTGGAATGTCCATACAGGAGTTTGACAGGTTACCTCTTTGGAGACGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1
CDS CCA 72 bp GAGACGGAGACCGTCCTGTGCGTCGAATCAGACTTTTaGAATAAAAGAAATCGGATGAAGAACGCCGAATGT +
Preference number: 6 (lower is better)
Translates to: ETETVLCVESDF*NKRNRMKNAEC
Trigger: ACATTCGGCGTTCTTCATCCGATTTCTTTTATTCCAAAAGTCTGATTCGACGCACAGGACGGTCTCCGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369252.8
ENST00000369256.6
ENST00000392952.7
CDS CCA 72 bp TGCCAAGGCAGCTGCATCATGCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGATTCCTTGATCTGGAAC +
Preference number: 6 (lower is better)
Translates to: CQGSCIMLFVDG*LSVNVDSLIWN
Trigger: GTTCCAGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGATGCAGCTGCCTTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369256.6
CDS CCA 72 bp GGTCTAGAAGTTTCTTTGCAGGTGAAACACTTGATGTaGAAATGTTTGGTCTGGACCCGAAGCACTTCACCC +
Preference number: 6 (lower is better)
Translates to: GLEVSLQVKHLM*KCLVWTRSTSP
Trigger: GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAGTGTTTCACCTGCAAAGAAACTTCTAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS CCA 72 bp AGCAGTCTGGGTTGGAACATGGCTGTTCTATCGGTGTaGCCAATTCAAGAAAGACAAAGTGTTCCATACCTG +
Preference number: 6 (lower is better)
Translates to: SSLGWNMAVLSV*PIQERQSVPYL
Trigger: CAGGTATGGAACACTTTGTCTTTCTTGAATTGGCCACACCGATAGAACAGCCATGTTCCAACCCAGACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485570.1
CDS CCA 72 bp GCGTTTCATGTCAGGTCCATGCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGATTCCTTGATCTGGAAC +
Preference number: 6 (lower is better)
Translates to: AFHVRSMLFVDG*LSVNVDSLIWN
Trigger: GTTCCAGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGGACCTGACATGAAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651023.1
ENST00000651092.1
CDS CCA 72 bp GATGACTTCAAACAGTACATGCTGTTTGTAGATGGGTaGCTTTCGGTAAATGTTGATTCCTTGATCAGGTCT +
Preference number: 6 (lower is better)
Translates to: DDFKQYMLFVDG*LSVNVDSLIRS
Trigger: AGACCTGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGTACTGTTTGAAGTCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440467.5
CDS CCA 72 bp AACAATCTTGATTCTCTGGGCAGTCTCCTTGGTCCTTaGTCTTTTCTAAATGGTCTAGAAGTTTCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: NNLDSLGSLLGP*SFLNGLEVSLQ
Trigger: CTGCAAAGAAACTTCTAGACCATTTAGAAAAGACCAAGGACCAAGGAGACTGCCCAGAGAATCAAGATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477638.1
CDS CAA 72 bp AGCATTTCATATGGAAATATCTTTGGTTCCAACATGTaGGGCATAGACACTCCTCGGTCCATTCTCATTGCA +
Preference number: 6 (lower is better)
Translates to: SISYGNIFGSNM*GIDTPRSILIA
Trigger: TGCAATGAGAATGGACCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAAGATATTTCCATATGAAATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000277895.9
ENST00000369252.8
ENST00000369253.6
ENST00000369256.6
ENST00000369266.7
ENST00000392952.7
ENST00000392955.7
ENST00000533213.6
ENST00000649363.1