RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000143322

Ensembl transcript IDs: ENST00000344730.7, ENST00000367623.8, ENST00000392043.4, ENST00000502732.6, ENST00000504324.1, ENST00000504405.5, ENST00000507173.5, ENST00000508127.1, ENST00000509520.5, ENST00000511413.5, ENST00000512653.5, ENST00000659126.1, ENST00000660584.1, ENST00000662960.1, ENST00000668691.1

Found 750 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCACTTGGAGGGAAGGGTCCGGCGAGACCTCGCCAGGTGGGCTTaGGAAACGCAGCAACTGCCAAGTGAACACTCTCAGGAAACCACT +
Preference number: 1 (lower is better)
Translates to: VHLEGRVRRDLARWA*ETQQLPSEHSQETT
Trigger: AGTGGTTTCCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGGTCTCGCCGGACCCTTCCCTCCAAGTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp ACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATaGCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCCTC +
Preference number: 1 (lower is better)
Translates to: TAGDILRGSPNTCQE*PAPRVSSNPLNLGL
Trigger: GAGGCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 90 bp GAGGAGATGAACCCAATCACTAGCTGCCTGTGCTGCAACTGCAGGTaGCATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGC +
Preference number: 1 (lower is better)
Translates to: EEMNPITSCLCCNCR*HTAGITQHLPGMPS
Trigger: GCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCACAGGCAGCTAGTGATTGGGTTCATCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 90 bp GGGTCCGGCGAGACCTCGCCAGGTGGGCTTGAGAAACGCAGCAACTaGCAAGTGAACACTCTCAGGAAACCACTTCAAGTGGCGGATTCT +
Preference number: 1 (lower is better)
Translates to: GSGETSPGGLEKRSN*QVNTLRKPLQVADS
Trigger: AGAATCCGCCACTTGAAGTGGTTTCCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGGTCTCGCCGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp CTGAGGACAGTGCTGTGCCTGGCCTTTCCCCTTCAACACGCCAGCTaGTCCCTCAGAGTGAACAGGGCTTTGCTACTCTGCTCAGGTCAA +
Preference number: 1 (lower is better)
Translates to: LRTVLCLAFPLQHAS*SLRVNRALLLCSGQ
Trigger: TTGACCTGAGCAGAGTAGCAAAGCCCTGTTCACTCTGAGGGAGCAGCTGGCGTGTTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp TGTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTaGCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAAC +
Preference number: 1 (lower is better)
Translates to: CAATAGDILRGSPNT*QECPAPRVSSNPLN
Trigger: GTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 90 bp GCACTGGGTGTTTCAAACACCTGGCGAGATTACTGGAGAATACACTaGCCGAGACCCCAGCCCACTGGGAATTCTGATCTGGAGTGGGGC +
Preference number: 1 (lower is better)
Translates to: ALGVSNTWRDYWRIH*PRPQPTGNSDLEWG
Trigger: GCCCCACTCCAGATCAGAATTCCCAGTGGGCTGGGGTCTCGGCCAGTGTATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp GCGAGACCTCGCCAGGTGGGCTTGAGAAACGCAGCAACTGCCAAGTaGACACTCTCAGGAAACCACTTCAAGTGGCGGATTCTCACAGAT +
Preference number: 1 (lower is better)
Translates to: ARPRQVGLRNAATAK*TLSGNHFKWRILTD
Trigger: ATCTGTGAGAATCCGCCACTTGAAGTGGTTTCCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGGTCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp AATAAACTTCCCAAGAGACAGGCTGGACTGAGTCATGGGGGTGAGTaGTCCAGAGTAGGCTGTAGCTTGTCCCACAGCCCTGAATCCCAC +
Preference number: 1 (lower is better)
Translates to: NKLPKRQAGLSHGGE*SRVGCSLSHSPESH
Trigger: GTGGGATTCAGGGCTGTGGGACAAGCTACAGCCTACTCTGGAGCACTCACCCCCATGACTCAGTCCAGCCTGTCTCTTGGGAAGTTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp ATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTGTaGCTGGCCTTTCCCCTTCAACACGCCAGCTGCTCCCTCAGAGTG +
Preference number: 1 (lower is better)
Translates to: ITILLQIWCGLRTVL*LAFPLQHASCSLRV
Trigger: CACTCTGAGGGAGCAGCTGGCGTGTTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp GTGAACACTCTCAGGAAACCACTTCAAGTGGCGGATTCTCACAGATaGAGGATCTGGCCACTGCCATCTGAGAAGCTCGTGTCTACCAGC +
Preference number: 1 (lower is better)
Translates to: VNTLRKPLQVADSHR*RIWPLPSEKLVSTS
Trigger: GCTGGTAGACACGAGCTTCTCAGATGGCAGTGGCCAGATCCTCCATCTGTGAGAATCCGCCACTTGAAGTGGTTTCCTGAGAGTGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp CCAGCAAAAGACAGAGAAGAACCACTAGGGAGACCCCTGTACTTATaGTTTACAGATAGCCACCAACAGGCAGGAAGCCGATCCTGGTCC +
Preference number: 1 (lower is better)
Translates to: PAKDREEPLGRPLYL*FTDSHQQAGSRSWS
Trigger: GGACCAGGATCGGCTTCCTGCCTGTTGGTGGCTATCTGTAAACCATAAGTACAGGGGTCTCCCTAGTGGTTCTTCTCTGTCTTTTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 90 bp GCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTaGGCCTCCTTTGGAGCAGCAATGGTAAGAATCAAGGTTTCCTTT +
Preference number: 1 (lower is better)
Translates to: ARNAQHRVSPLILLT*ASFGAAMVRIKVSF
Trigger: AAAGGAAACCTTGATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 90 bp CTCAGGAAACCACTTCAAGTGGCGGATTCTCACAGATGGAGGATCTaGCCACTGCCATCTGAGAAGCTCGTGTCTACCAGCTCTAGTTCA +
Preference number: 1 (lower is better)
Translates to: LRKPLQVADSHRWRI*PLPSEKLVSTSSSS
Trigger: TGAACTAGAGCTGGTAGACACGAGCTTCTCAGATGGCAGTGGCCAGATCCTCCATCTGTGAGAATCCGCCACTTGAAGTGGTTTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp GTGGCCTCTCAGCAGTTTCTGCCATTCCAAGTCAGCTTTGAATCATaGCCTGCCACAGGCCTCCTTACCTGGGAAGAAGTATGGGATCTT +
Preference number: 1 (lower is better)
Translates to: VASQQFLPFQVSFES*PATGLLTWEEVWDL
Trigger: AAGATCCCATACTTCTTCCCAGGTAAGGAGGCCTGTGGCAGGTCATGATTCAAAGCTGACTTGGAATGGCAGAAACTGCTGAGAGGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 90 bp ATCTTTGAAGGCACAAATCTCCAAGGGTGGCCTCTCAGCAGTTTCTaGCATTCCAAGTCAGCTTTGAATCATGACCTGCCACAGGCCTCC +
Preference number: 1 (lower is better)
Translates to: IFEGTNLQGWPLSSF*HSKSALNHDLPQAS
Trigger: GGAGGCCTGTGGCAGGTCATGATTCAAAGCTGACTTGGAATGGCAGAAACTGCTGAGAGGCCACCCTTGGAGATTTGTGCCTTCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp AGTTTTCAGATAGCACTGGGTGTTTCAAACACCTGGCGAGATTACTaGAGAATACACTGGCCGAGACCCCAGCCCACTGGGAATTCTGAT +
Preference number: 1 (lower is better)
Translates to: SFQIALGVSNTWRDY*RIHWPRPQPTGNSD
Trigger: ATCAGAATTCCCAGTGGGCTGGGGTCTCGGCCAGTGTATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACCCAGTGCTATCTGAAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp CGCTGGTTTTTACATCTGAGTTCTCTTCCAACCACTAGGAGGAGATaGACCCAATCACTAGCTGCCTGTGCTGCAACTGCAGGTGACATA +
Preference number: 1 (lower is better)
Translates to: RWFLHLSSLPTTRRR*TQSLAACAATAGDI
Trigger: TATGTCACCTGCAGTTGCAGCACAGGCAGCTAGTGATTGGGTTCATCTCCTCCTAGTGGTTGGAAGAGAACTCAGATGTAAAAACCAGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 90 bp CCACAGGCCTCCTTACCTGGGAAGAAGTATGGGATCTTCTTATCTTaGTCCCACAGGGTGAAGCCTTCCCTAATTTCCTGTCCTTTGGAT +
Preference number: 1 (lower is better)
Translates to: PQASLPGKKYGIFLS*SHRVKPSLISCPLD
Trigger: ATCCAAAGGACAGGAAATTAGGGAAGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCCATACTTCTTCCCAGGTAAGGAGGCCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp CAGCTGACAAGTCTTTTCCTCTCTGAGACTCATGAAACCCATCTTTaGAGGCACAAATCTCCAAGGGTGGCCTCTCAGCAGTTTCTGCCA +
Preference number: 1 (lower is better)
Translates to: QLTSLFLSETHETHL*RHKSPRVASQQFLP
Trigger: TGGCAGAAACTGCTGAGAGGCCACCCTTGGAGATTTGTGCCTTCAAAGATGGGTTTCATGAGTCTCAGAGAGGAAAAGACTTGTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp GTCAACACACCAACCACGCCACTGCTGTTCATCCAAGGAAAGATCTaGGCGATTCCTCTTTTACTTACTCCCCCTTTCTTAATGGGCACG +
Preference number: 1 (lower is better)
Translates to: VNTPTTPLLFIQGKI*AIPLLLTPPFLMGT
Trigger: CGTGCCCATTAAGAAAGGGGGAGTAAGTAAAAGAGGAATCGCTCAGATCTTTCCTTGGATGAACAGCAGTGGCGTGGTTGGTGTGTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp ATAGACACAGATGACATGTATCACAATTCTGCTCCAAATATGGTGTaGTCTGAGGACAGTGCTGTGCCTGGCCTTTCCCCTTCAACACGC +
Preference number: 1 (lower is better)
Translates to: IDTDDMYHNSAPNMV*SEDSAVPGLSPSTR
Trigger: GCGTGTTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATCTGTGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp ACCTTGAGCCCTCAACCCCTGAAGTTACATAGTTCAAGCATCATGTaGACGGGGTATGCTCCAATAGTCAATGCCACTCTTGACAGTGTT +
Preference number: 1 (lower is better)
Translates to: TLSPQPLKLHSSSIM*TGYAPIVNATLDSV
Trigger: AACACTGTCAAGAGTGGCATTGACTATTGGAGCATACCCCGTCCACATGATGCTTGAACTATGTAACTTCAGGGGTTGAGGGCTCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 90 bp CTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCACTACTGCCTTGCCCCCACTTAATT +
Preference number: 1 (lower is better)
Translates to: LHCLPYDIHMFPIFQ*SFQPCPLLPCPHLI
Trigger: AATTAAGTGGGGGCAAGGCAGTAGTGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 90 bp CACTGCACTAAAAGAGCTTTCCAGAGAGGCTCTCCAAGGGATAGCTaGACACTTACTTGCAACACCCTTGAGAACATGTACTGTTACCTT +
Preference number: 1 (lower is better)
Translates to: HCTKRAFQRGSPRDS*TLTCNTLENMYCYL
Trigger: AAGGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGAGCCTCTCTGGAAAGCTCTTTTAGTGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 90 bp ACAGCTAAGTCAGCCTGTTCACAGTCAACACACCAACCACGCCACTaGTGTTCATCCAAGGAAAGATCTGAGCGATTCCTCTTTTACTTA +
Preference number: 1 (lower is better)
Translates to: TAKSACSQSTHQPRH*CSSKERSERFLFYL
Trigger: TAAGTAAAAGAGGAATCGCTCAGATCTTTCCTTGGATGAACAGCAGTGGCGTGGTTGGTGTGTTGACTGTGAACAGGCTGACTTAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp TCAAGAAATTCCTCTCAAAACATAATGGAGGCCAAATGGCCACAGTaGGAAATTGCTGTCAAAATGGAGGAGAGCTGGTTTCTCTGGCCC +
Preference number: 1 (lower is better)
Translates to: SRNSSQNIMEAKWPQ*EIAVKMEESWFLWP
Trigger: GGGCCAGAGAAACCAGCTCTCCTCCATTTTGACAGCAATTTCTCACTGTGGCCATTTGGCCTCCATTATGTTTTGAGAGGAATTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp CAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTaGACAAAAATTTCTCTTGGTACATTCCCAGCTTTCTTTTCTGCT +
Preference number: 1 (lower is better)
Translates to: QWPCGSKANSYFQQP*TKISLGTFPAFFSA
Trigger: AGCAGAAAAGAAAGCTGGGAATGTACCAAGAGAAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 90 bp CATATAGTGGATAAATGGAGAAGAGTAAGAGGACCTCATCCTTCTTaGGTCAAGGTCCTTGGAAGAGCTTCTGTGTTCTGGAGTGAGTAC +
Preference number: 1 (lower is better)
Translates to: HIVDKWRRVRGPHPS*VKVLGRASVFWSEY
Trigger: GTACTCACTCCAGAACACAGAAGCTCTTCCAAGGACCTTGACTCAAGAAGGATGAGGTCCTCTTACTCTTCTCCATTTATCCACTATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp CAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCTACTACTGGCTTaGTACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAAT +
Preference number: 1 (lower is better)
Translates to: QTEAGIYKGSELLLA*YKLRQRHKPLKPIN
Trigger: ATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTATCAAGCCAGTAGTAGCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 90 bp CCAGAACTCTATCCAAATGATATAGATATCTTGACTGTTAAGAGTTaGAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGAC +
Preference number: 1 (lower is better)
Translates to: PELYPNDIDILTVKS*RRFRSSHILLRIPD
Trigger: GTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGGATAGAGTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 90 bp GTGTATTTATGGACACAAACACACACCAGCTATACAGATCTGAGATaGGAGGGTTTTCAAACATATGCCCTAAAGAACCATAAACAAGTA +
Preference number: 1 (lower is better)
Translates to: VYLWTQTHTSYTDLR*EGFQTYALKNHKQV
Trigger: TACTTGTTTATGGTTCTTTAGGGCATATGTTTGAAAACCCTCTCATCTCAGATCTGTATAGCTGGTGTGTGTTTGTGTCCATAAATACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTGCTGCAGTCTTGCTaGGAGCAGCCCTGCCTAGCA +
Preference number: 2 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPLLQSC*EQPCLA
Trigger: TGCTAGGCAGGGCTGCTCTCAGCAAGACTGCAGCAG...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTCTGGGTGCAGCTGCTaGAGTCTTGCTGAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: GDHPTPARNAQHRVSPLISGCSC*SLAESS
Trigger: GCTGCTCTCAGCAAGACTGCAGCAGCTGCACCCAGA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATAGCCCCAGGTCTGGGTaGAGCTGCTGCAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNSPRSG*SCCSLA
Trigger: AGCAAGACTGCAGCAGCTGCACCCAGACCTGGGGCT...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCTTCCCAGGGTCTACCTaGTGCTCCCTGAAAATGACT +
Preference number: 2 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGFPGST*CSLKMT
Trigger: AGTCATTTTCAGGGAGCACCAGGTAGACCCTGGGAA...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGTATTGAGCTCTCCTTaGGGAGGATGGGGGAAGTAT +
Preference number: 2 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQVLSSP*GGWGKY
Trigger: ATACTTCCCCCATCCTCCCCAAGGAGAGCTCAATAC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCACTGGTTAATGCTCTaGATGCTACCAGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPHWLML*MLPGIK
Trigger: CTTTATTCCTGGTAGCATTCAGAGCATTAACCAGTG...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTCTCCAAGGGATAGCTaGACACTTACTTGCAACACC +
Preference number: 2 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQSPRDS*TLTCNT
Trigger: GGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTGGGTTCAAGCAATTCTaGCTCAGCCTCGGGAGTAGC +
Preference number: 2 (lower is better)
Translates to: APHTHLRGGTFGINVQRVGFKQF*LSLGSS
Trigger: GCTACTCCCGAGGCTGAGGCAGAATTGCTTGAACCC...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAACTGCTGCAGTCTTGCTaGGAGCAGCCCTGCCTAGCA +
Preference number: 2 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQELLQSC*EQPCLA
Trigger: TGCTAGGCAGGGCTGCTCTCAGCAAGACTGCAGCAG...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGATCCTGGTCCATTATaGAATAATATACCAGACTGG +
Preference number: 2 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPDPGPL*NNIPDW
Trigger: CCAGTCTGGTATATTATTTCATAATGGACCAGGATC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATTGTCCACTACTGCCTTaGCCCCACTTAATTTACCTC +
Preference number: 2 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNCPLLP*PHLIYL
Trigger: GAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACA...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAGCCCCAGGTCTGGGTaGAGCTGCTGCAGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQESPRSG*SCCSLA
Trigger: AGCAAGACTGCAGCAGCTGCACCCAGACCTGGGGCT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTCACATACAGGCCACTaGGTTTCAAGAAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: GDHPTPARNAQHRVSPLISHTGH*VSRKDH
Trigger: ATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTTGACAGTGTATCAATaGCAGAGCCAGAAGAAAACT +
Preference number: 2 (lower is better)
Translates to: GDHPTPARNAQHRVSPLILTVYQ*QSQKKT
Trigger: AGTTTTCTTCTGGCTCTGTCATTGATACACTGTCAA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGAGGTCTGGGTGCAGCTaGTGCAGTCTTGCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: LFSTWIGLKVVREGKGTERSGCS*CSLAES
Trigger: GCTCTCAGCAAGACTGCAGCAGCTGCACCCAGACCT...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTGTAGCACTCTGATTTaGAGTTCTTATTACAGCAGC +
Preference number: 2 (lower is better)
Translates to: GDHPTPARNAQHRVSPLICSTLI*SSYYSS
Trigger: GCTGCTGTAATAAGAACTGCAAATCAGAGTGCTACA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTTCACCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 2 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSASPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGTGA...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAGACCCCTGTACTTATaGTTTACAGATAGCCACCAA +
Preference number: 2 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGRPLYL*FTDSHQ
Trigger: TTGGTGGCTATCTGTAAACCATAAGTACAGGGGTCT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTCTGGGAATTCTGATCTaGAGTGGGGCTATTCCGTCA +
Preference number: 2 (lower is better)
Translates to: APHTHLRGGTFGINVQRVLGILI*SGAIPS
Trigger: TGACGGAATAGCCCCACTCCAGATCAGAATTCCCAG...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 90 bp TCTCTGGCCCTCATCTACCAGAAGCATCTCTGTCCCCTGGCGTTCTaGCCACTCACAATACCTGGTATGGTACTTCTGAACTGTGCAGAA +
Preference number: 2 (lower is better)
Translates to: SLALIYQKHLCPLAF*PLTIPGMVLLNCAE
Trigger: TTCTGCACAGTTCAGAAGTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCTGGTAGATGAGGGCCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACGGGATCTTCTTATCTTaGTCCCACAGGGTGAAGCCT +
Preference number: 2 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYGIFLS*SHRVKP
Trigger: AGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCC...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTGTAGCACTCTGATTTaGAGTTCTTATTACAGCAGC +
Preference number: 2 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQCSTLI*SSYYSS
Trigger: GCTGCTGTAATAAGAACTGCAAATCAGAGTGCTACA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACAGCCTCGGGAGTAGCTaGGATTACAGGCATGTACTA +
Preference number: 2 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYSLGSS*DYRHVL
Trigger: TAGTACATGCCTGTAATCCCAGCTACTCCCGAGGCT...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 90 bp GCCACAGGCCTCCTTACCTGGGAAGAAGTATGGGATCTTCTTATCTaGATCCCACAGGGTGAAGCCTTCCCTAATTTCCTGTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: ATGLLTWEEVWDLLI*IPQGEAFPNFLSFG
Trigger: TCCAAAGGACAGGAAATTAGGGAAGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCCATACTTCTTCCCAGGTAAGGAGGCCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAATGCTGCAACTGCAGGTaGCATACTGCGGGGATCACC +
Preference number: 2 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKCCNCR*HTAGIT
Trigger: GGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCA...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTCTTGTCCCACAGCCCTaGATCCCACCCATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSALVPQP*IPPMLL
Trigger: GAGAAGCATGGGTGGGATTCAGGGCTGTGGGACAAG...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAGTGCCTCTTTAACCTaGACCTTGAGCCCTCAACCC +
Preference number: 2 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSASLT*TLSPQP
Trigger: GGGTTGAGGGCTCAAGGTTCAGGTTAAAGAGGCACT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGGTCCCCTGGCGTTCTTaGCACTCACAATACCTGGTA +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPVPWRS*HSQYLV
Trigger: TACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGAC...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGAGCATCTCTGTCCCCTaGCGTTCTTGCCACTCACAA +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPSISVP*RSCHSQ
Trigger: TTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCT...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCCAGGGTCTACCTGGTaGTCCCTGAAAATGACTACT +
Preference number: 2 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHPGSTW*SLKMTT
Trigger: AGTAGTCATTTTCAGGGAGCACCAGGTAGACCCTGG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGGAGAAACGCAGCAACTaGCAAGTGAACACTCTCAGG +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPEKRSN*QVNTLR
Trigger: CCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTC...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGCACCAACCACGCCACTaGTGTTCATCCAAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPHQPRH*CSSKER
Trigger: TCTTTCCTTGGATGAACAGCAGTGGCGTGGTTGGTG...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTAATTTACAAAGGAAGTaGGCTACTACTGGCTTGATA +
Preference number: 2 (lower is better)
Translates to: APHTHLRGGTFGINVQRVNLQRK*ATTGLI
Trigger: TATCAAGCCAGTAGTAGCTCACTTCCTTTGTAAATT...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTTGTCCACTACTGCCTTaGCCCCACTTAATTTACCTC +
Preference number: 2 (lower is better)
Translates to: CGGDSLQIHREENASPYSCPLLP*PHLIYL
Trigger: GAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACA...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEFPIFQ*SFQPCP
Trigger: TGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAA...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTAGGGATGGGCTGCATTaGCTTCCTTATGACATACAC +
Preference number: 2 (lower is better)
Translates to: CGGDSLQIHREENASPYSRDGLH*LPYDIH
Trigger: GTGTATGTCATAAGGAAGGCAATGCAGCCCATCCCT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAGTATTGAGCTCTCCTTaGGGAGGATGGGGGAAGTAT +
Preference number: 2 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKVLSSP*GGWGKY
Trigger: ATACTTCCCCCATCCTCCCCAAGGAGAGCTCAATAC...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGATTGACTGTTAAGAGTTaGAGACGTTTCAGAAGTTCT +
Preference number: 2 (lower is better)
Translates to: DVHGDEEVSALGGKGPARLTVKS*RRFRSS
Trigger: AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAA...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACACCTGGGAAGAAGTATaGGATCTTCTTATCTTGATC +
Preference number: 2 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYTWEEV*DLLILI
Trigger: GATCAAGATAAGAAGATCCCATACTTCTTCCCAGGT...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 90 bp GTTCCCTATTTTCCAGTGCAGTTTCCAACCCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCTCTCCTATACTTATGTGGTTTGCTT +
Preference number: 2 (lower is better)
Translates to: VPYFPVQFPTLSTTA*PPLNLPLLYLCGLL
Trigger: AAGCAAACCACATAAGTATAGGAGAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGCATTGCCTTCCTTATaGCATACACATGTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: YYSSNGLVEARLTATSNSALPSL*HTHVPY
Trigger: ATAGGGAACATGTGTATGTCATAAGGAAGGCAATGC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAACACTGGTTAATGCTCTaGATGCTACCAGGAATAAAG +
Preference number: 2 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQEHWLML*MLPGIK
Trigger: CTTTATTCCTGGTAGCATTCAGAGCATTAACCAGTG...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACCATCTAGAAAAACACTaGATGAATTTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYHLEKH*MNFLGP
Trigger: TGGCCCTAAGAAATTCATTCAGTGTTTTTCTAGATG...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTCTGGGTGCAGCTGCTaGAGTCTTGCTGAGAGCAGC +
Preference number: 2 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTSGCSC*SLAESS
Trigger: GCTGCTCTCAGCAAGACTGCAGCAGCTGCACCCAGA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAGGTCTGGGTGCAGCTaGTGCAGTCTTGCTGAGAGC +
Preference number: 2 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTRSGCS*CSLAES
Trigger: GCTCTCAGCAAGACTGCAGCAGCTGCACCCAGACCT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTAGCTGCTCAAGTCCTTaGCCAGTATGTCAGTATGCA +
Preference number: 2 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFSCSSP*PVCQYA
Trigger: TGCATACTGACATACTGGCCAAGGACTTGAGCAGCT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTGGGAGAAGGACCGCTaGTTTTTACATCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHWEKDR*FLHLSS
Trigger: AGAACTCAGATGTAAAAACCAGCGGTCCTTCTCCCA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAGTTCAAGCATCATGTaGACGGGGTATGCTCCAATA +
Preference number: 2 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSSSIM*TGYAPI
Trigger: TATTGGAGCATACCCCGTCCACATGATGCTTGAACT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTATGACTGAATTCTACTaGGTGCTTGCTTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAMTEFY*VLAWLV
Trigger: CACAAGCCAAGCAAGCACTCAGTAGAATTCAGTCAT...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGACCCTGAAAATTTGCTaGTGCGAGTACAGTGATGAA +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPTLKIC*CEYSDE
Trigger: TTCATCACTGTACTCGCATCAGCAAATTTTCAGGGT...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGAACATTTATAGAGTGTaGTCATTGTGTGCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPNIYRV*SLCARH
Trigger: GTGCCTGGCACACAATGAGCACACTCTATAAATGTT...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTCTGAATTCTACTGAGTaGTTGCTTGGCTTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSALNSTE*LLGLCS
Trigger: GGAACACAAGCCAAGCAAGCACTCAGTAGAATTCAG...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATTATTACAGCAGCAATaGCCTTGTGGAAGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPLLQQQ*PCGSKA
Trigger: AGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATAA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGGATGAGGCTGTGGTTTaGCAGTGTATCAATGACAGA +
Preference number: 2 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQDEAVV*QCINDR
Trigger: TCTGTCATTGATACACTGTCAAACCACAGCCTCATC...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAGCTTGTATAGTAAGTTaGCAGTGCCTCTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKACIVS*QCLFNL
Trigger: CAGGTTAAAGAGGCACTGTCAACTTACTATACAAGC...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATTGGCAGGAAAGAAGGTaGGAGAAGGACCGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNWQERR*EKDRWF
Trigger: AAACCAGCGGTCCTTCTCCCACCTTCTTTCCTGCCA...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCAGAGCTTCTGTGTTCTaGAGTGAGTACACATTCTTA +
Preference number: 2 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSRASVF*SEYTFL
Trigger: TAAGAATGTGTACTCACTCCAGAACACAGAAGCTCT...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTACCACTAGGAGGAGATaGACCCAATCACTAGCTGCC +
Preference number: 2 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSTTRRR*TQSLAA
Trigger: GGCAGCTAGTGATTGGGTTCATCTCCTCCTAGTGGT...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGTACAATCCCTTAACTTaGATCCCACAACAACAGGGA +
Preference number: 2 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQYNPLT*IPQQQG
Trigger: TCCCTGTTGTTGTGGGATGCAAGTTAAGGGATTGTA...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTTATTACAGCAGCAATaGCCTTGTGGAAGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLLQQQ*PCGSKA
Trigger: AGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATAA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTCCCTATTCTCTACCTaGATTGGGCTTAAGGTGGTA +
Preference number: 2 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLSLFST*IGLKVV
Trigger: TACCACCTTAAGCCCAATCCAGGTAGAGAATAGGGA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCTAATCCTCTTAACCTaGGCCTCCTTTGGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTLILLT*ASFGAA
Trigger: TGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCTCAGTGCTCAATGTTaGATTCCTATCTTCCTAAGC +
Preference number: 2 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLSAQC*IPIFLS
Trigger: GCTTAGGAAGATAGGAATTCAACATTGAGCACTGAG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTCAGGTAGGGATGGGCTaGATTGCCTTCCTTATGACA +
Preference number: 2 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSQVGMG*IAFLMT
Trigger: TGTCATAAGGAAGGCAATGCAGCCCATCCCTACCTG...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGCAGAAGAAAACTCAGTaGTCAATGTTGAATTCCTAT +
Preference number: 2 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPQKKTQ*SMLNSY
Trigger: ATAGGAATTCAACATTGAGCACTGAGTTTTCTTCTG...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTAACCTGGGCCTCCTTTaGAGCAGCAATGGTAAGAAT +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTNLGLL*SSNGKN
Trigger: ATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTT...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTTGGCAGCAGGTATGGTaGAAAGACCCCACAACCATA +
Preference number: 2 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSWQQVW*KDPTTI
Trigger: TATGGTTGTGGGGTCTTTCCACCATACCTGCTGCCA...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAGCATTGCCTTCCTTATaGCATACACATGTTCCCTAT +
Preference number: 2 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTALPSL*HTHVPY
Trigger: ATAGGGAACATGTGTATGTCATAAGGAAGGCAATGC...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTTGACAGTGTATCAATaGCAGAGCCAGAAGAAAACT +
Preference number: 2 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLTVYQ*QSQKKT
Trigger: AGTTTTCTTCTGGCTCTGTCATTGATACACTGTCAA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGGAAGTAATTCAGCTCTaGACTACAACTTTAGCAAAC +
Preference number: 2 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQEVIQL*TTTLAN
Trigger: GTTTGCTAAAGTTGTAGTTCAGAGCTGAATTACTTC...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGCCAAATGGCCACAGTaGGAAATTGCTGTCAAAATG +
Preference number: 2 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNAKWPQ*EIAVKM
Trigger: CATTTTGACAGCAATTTCTCACTGTGGCCATTTGGC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTFPIFQ*SFQPCP
Trigger: TGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCCCAGCTTTCTTTTCTaGTGTCCCACCAAATTCATT +
Preference number: 2 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFPSFLF*CPTKFI
Trigger: AATGAATTTGGTGGGACAGCAGAAAAGAAAGCTGGG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACCCAGCTTTCTTTTCTaGTGTCCCACCAAATTCATT +
Preference number: 2 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTPSFLF*CPTKFI
Trigger: AATGAATTTGGTGGGACAGCAGAAAAGAAAGCTGGG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTAGCTGCACACTTACTTaGAACACCCTTGAGAACATG +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTSCTLT*NTLENM
Trigger: CATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCT...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATCCATTTATATATCGTaGACCCACTGTAGGCAAGAC +
Preference number: 2 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTSIYIS*THCRQD
Trigger: GTCTTGCCTACAGTGGGTGCACGATATATAAATGGA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTCCCTATTCTCTACCTaGATTGGGCTTAAGGTGGTA +
Preference number: 2 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTSLFST*IGLKVV
Trigger: TACCACCTTAAGCCCAATCCAGGTAGAGAATAGGGA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTTGGGAGAAGGACCGCTaGTTTTTACATCTGAGTTCT +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTWEKDR*FLHLSS
Trigger: AGAACTCAGATGTAAAAACCAGCGGTCCTTCTCCCA...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATTACTTGCAACACCCTTaGGAACATGTACTGTTACCT +
Preference number: 2 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNYLQHP*EHVLLP
Trigger: AGGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTA...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGCTTGTATAGTAAGTTaGCAGTGCCTCTTTAACCTG +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTACIVS*QCLFNL
Trigger: CAGGTTAAAGAGGCACTGTCAACTTACTATACAAGC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR TCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTGCTGGTTTTTACATCTaGGTTCTCTTCCAACCACTA +
Preference number: 2 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSAGFYI*VLFQPL
Trigger: TAGTGGTTGGAAGAGAACTCAGATGTAAAAACCAGC...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTGGTGTTTCAAACACCTaGCGAGATTACTGGAGAATA +
Preference number: 2 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSGVSNT*RDYWRI
Trigger: TATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACC...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 90 bp CTAGTAGTTGGAAAACCAGAACTCTATCCAAATGATATAGATATCTaGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTCACATACTC +
Preference number: 2 (lower is better)
Translates to: LVVGKPELYPNDIDI*TVKSWRRFRSSHIL
Trigger: GAGTATGTGAGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGGATAGAGTTCTGGTTTTCCAACTACTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCATCTAGAAAAACACTaGATGAATTTCTTAGGGCCA +
Preference number: 2 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTHLEKH*MNFLGP
Trigger: TGGCCCTAAGAAATTCATTCAGTGTTTTTCTAGATG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGGTTTGTGTTTAAGCTaGTCCTTTTCAAGTAGAAAA +
Preference number: 2 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNGLCLS*SFSSRK
Trigger: TTTTCTACTTGAAAAGGACCAGCTTAAACACAAACC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp GAGGGAAGGGTCCGGCGAGACCTCGCCAGGTGGGCTTaGGAAACGCAGCAACTGCCAAGTGAACACTCTCAG +
Preference number: 3 (lower is better)
Translates to: EGRVRRDLARWA*ETQQLPSEHSQ
Trigger: CTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGGTCTCGCCGGACCCTTCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp CCCAAGAGACAGGCTGGACTGAGTCATGGGGGTGAGTaGTCCAGAGTAGGCTGTAGCTTGTCCCACAGCCCT +
Preference number: 3 (lower is better)
Translates to: PKRQAGLSHGGE*SRVGCSLSHSP
Trigger: AGGGCTGTGGGACAAGCTACAGCCTACTCTGGAGCACTCACCCCCATGACTCAGTCCAGCCTGTCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp GTGCTGTGCCTGGCCTTTCCCCTTCAACACGCCAGCTaGTCCCTCAGAGTGAACAGGGCTTTGCTACTCTGC +
Preference number: 3 (lower is better)
Translates to: VLCLAFPLQHAS*SLRVNRALLLC
Trigger: GCAGAGTAGCAAAGCCCTGTTCACTCTGAGGGAGCAGCTGGCGTGTTGAAGGGGAAAGGCCAGGCACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCT +
Preference number: 3 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPLSTTA*PPLNLP
Trigger: AGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAG...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 72 bp ACTGCAGGTGACATACTGCGGGGATCACCCAACACCTaGCAGGAATGCCCAGCACCGCGTGTCTCCTCTAAT +
Preference number: 3 (lower is better)
Translates to: TAGDILRGSPNT*QECPAPRVSSN
Trigger: ATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 72 bp CTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTGTaGCTGGCCTTTCCCCTTCAACACGCCAGCTGCTCC +
Preference number: 3 (lower is better)
Translates to: LLQIWCGLRTVL*LAFPLQHASCS
Trigger: GGAGCAGCTGGCGTGTTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp AACCCAATCACTAGCTGCCTGTGCTGCAACTGCAGGTaGCATACTGCGGGGATCACCCAACACCTGCCAGGA +
Preference number: 3 (lower is better)
Translates to: NPITSCLCCNCR*HTAGITQHLPG
Trigger: TCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCACAGGCAGCTAGTGATTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 72 bp GACATACTGCGGGGATCACCCAACACCTGCCAGGAATaGCCAGCACCGCGTGTCTCCTCTAATCCTCTTAAC +
Preference number: 3 (lower is better)
Translates to: DILRGSPNTCQE*PAPRVSSNPLN
Trigger: GTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 72 bp CCTTTCCCCTTCAACACGCCAGCTGCTCCCTCAGAGTaGACAGGGCTTTGCTACTCTGCTCAGGTCAAAAGG +
Preference number: 3 (lower is better)
Translates to: PFPFNTPAAPSE*TGLCYSAQVKR
Trigger: CCTTTTGACCTGAGCAGAGTAGCAAAGCCCTGTTCACTCTGAGGGAGCAGCTGGCGTGTTGAAGGGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp ATAGCACTGGGTGTTTCAAACACCTGGCGAGATTACTaGAGAATACACTGGCCGAGACCCCAGCCCACTGGG +
Preference number: 3 (lower is better)
Translates to: IALGVSNTWRDY*RIHWPRPQPTG
Trigger: CCCAGTGGGCTGGGGTCTCGGCCAGTGTATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACCCAGTGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp CCACTTCAAGTGGCGGATTCTCACAGATGGAGGATCTaGCCACTGCCATCTGAGAAGCTCGTGTCTACCAGC +
Preference number: 3 (lower is better)
Translates to: PLQVADSHRWRI*PLPSEKLVSTS
Trigger: GCTGGTAGACACGAGCTTCTCAGATGGCAGTGGCCAGATCCTCCATCTGTGAGAATCCGCCACTTGAAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp CGCCAGGTGGGCTTGAGAAACGCAGCAACTGCCAAGTaGACACTCTCAGGAAACCACTTCAAGTGGCGGATT +
Preference number: 3 (lower is better)
Translates to: RQVGLRNAATAK*TLSGNHFKWRI
Trigger: AATCCGCCACTTGAAGTGGTTTCCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp GAGACCTCGCCAGGTGGGCTTGAGAAACGCAGCAACTaGCAAGTGAACACTCTCAGGAAACCACTTCAAGTG +
Preference number: 3 (lower is better)
Translates to: ETSPGGLEKRSN*QVNTLRKPLQV
Trigger: CACTTGAAGTGGTTTCCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp GCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTaGGCCTCCTTTGGAGCAGCAATGGTAAGAATCAAG +
Preference number: 3 (lower is better)
Translates to: AQHRVSPLILLT*ASFGAAMVRIK
Trigger: CTTGATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CAA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTTACTTGCAACACCCTaGAGAACATGTACTGTTACC +
Preference number: 3 (lower is better)
Translates to: GDHPTPARNAQHRVSPLILLATP*RTCTVT
Trigger: GGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTAA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 72 bp TCACTATGTCCCCTTAGCAATGCACACAGTGCCCGATaGTCCAAACCTCACCCTCTGTGCACCACATACACA +
Preference number: 3 (lower is better)
Translates to: SLCPLSNAHSAR*SKPHPLCTTYT
Trigger: TGTGTATGTGGTGCACAGAGGGTGAGGTTTGGAGCATCGGGCACTGTGTGCATTGCTAAGGGGACATAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTAAAACTGTCAACGCCTaGGACAAGGGCCTTTGCTCA +
Preference number: 3 (lower is better)
Translates to: APHTHLRGGTFGINVQRVKTVNA*DKGLCS
Trigger: TGAGCAAAGGCCCTTGTCCAAGGCGTTGACAGTTTT...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCACTCAGTGCTCAATGTaGAATTCCTATCTTCCTAAG +
Preference number: 3 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGTQCSM*NSYLPK
Trigger: CTTAGGAAGATAGGAATTCAACATTGAGCACTGAGT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CAA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGAGTGATCCGCCCATCTaGGTCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPSDPPI*VSQSAG
Trigger: CCCAGCACTTTGGGAGACCAAGATGGGCGGATCACT...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp TCAGCCTGTTCACAGTCAACACACCAACCACGCCACTaGTGTTCATCCAAGGAAAGATCTGAGCGATTCCTC +
Preference number: 3 (lower is better)
Translates to: SACSQSTHQPRH*CSSKERSERFL
Trigger: GAGGAATCGCTCAGATCTTTCCTTGGATGAACAGCAGTGGCGTGGTTGGTGTGTTGACTGTGAACAGGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp CAGCAGTTTCTGCCATTCCAAGTCAGCTTTGAATCATaGCCTGCCACAGGCCTCCTTACCTGGGAAGAAGTA +
Preference number: 3 (lower is better)
Translates to: QQFLPFQVSFES*PATGLLTWEEV
Trigger: TACTTCTTCCCAGGTAAGGAGGCCTGTGGCAGGTCATGATTCAAAGCTGACTTGGAATGGCAGAAACTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp CATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTaGGGACAGTGCTGTGCCTGGCCTTTCCCCTTCAAC +
Preference number: 3 (lower is better)
Translates to: HVSQFCSKYGVV*GQCCAWPFPFN
Trigger: GTTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTaGTCTGAGGACAGTGCTGTGCCTGGCCTTTCCCCT +
Preference number: 3 (lower is better)
Translates to: DDMYHNSAPNMV*SEDSAVPGLSP
Trigger: AGGGGAAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCT +
Preference number: 3 (lower is better)
Translates to: YYSSNGLVEARLTATSNSLSTTA*PPLNLP
Trigger: AGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAG...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 72 bp AAAGAAGGTGGGAGAAGGACCGCTGGTTTTTACATCTaGGTTCTCTTCCAACCACTAGGAGGAGATGAACCC +
Preference number: 3 (lower is better)
Translates to: KEGGRRTAGFYI*VLFQPLGGDEP
Trigger: GGGTTCATCTCCTCCTAGTGGTTGGAAGAGAACTCAGATGTAAAAACCAGCGGTCCTTCTCCCACCTTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 72 bp AGTCTTTTCCTCTCTGAGACTCATGAAACCCATCTTTaGAGGCACAAATCTCCAAGGGTGGCCTCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: SLFLSETHETHL*RHKSPRVASQQ
Trigger: CTGCTGAGAGGCCACCCTTGGAGATTTGTGCCTTCAAAGATGGGTTTCATGAGTCTCAGAGAGGAAAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp CTTCCTTATGACATACACATGTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCACTACTGCCTTGCCCC +
Preference number: 3 (lower is better)
Translates to: LPYDIHMFPIFQ*SFQPCPLLPCP
Trigger: GGGGCAAGGCAGTAGTGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR GCA 72 bp AGTTTGCCTCCAGCTTTTCTAAAAGGTTACTTAGCATaGTCGGAGACCTCAGCTTCTGAGGGTTCAGCTCAG +
Preference number: 3 (lower is better)
Translates to: SLPPAFLKGYLA*SETSASEGSAQ
Trigger: CTGAGCTGAACCCTCAGAAGCTGAGGTCTCCGAGCATGCTAAGTAACCTTTTAGAAAAGCTGGAGGCAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp GATAGTTTTCAGATAGCACTGGGTGTTTCAAACACCTaGCGAGATTACTGGAGAATACACTGGCCGAGACCC +
Preference number: 3 (lower is better)
Translates to: DSFQIALGVSNT*RDYWRIHWPRP
Trigger: GGGTCTCGGCCAGTGTATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACCCAGTGCTATCTGAAAACTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp ATGAAACCCATCTTTGAAGGCACAAATCTCCAAGGGTaGCCTCTCAGCAGTTTCTGCCATTCCAAGTCAGCT +
Preference number: 3 (lower is better)
Translates to: MKPIFEGTNLQG*PLSSFCHSKSA
Trigger: AGCTGACTTGGAATGGCAGAAACTGCTGAGAGGCCACCCTTGGAGATTTGTGCCTTCAAAGATGGGTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCCTACTGAGTGCTTGCTaGGCTTGTGTTCCCATTACT +
Preference number: 3 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSLLSAC*ACVPIT
Trigger: AGTAATGGGAACACAAGCCAAGCAAGCACTCAGTAG...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp AAAAGAGCTTTCCAGAGAGGCTCTCCAAGGGATAGCTaGACACTTACTTGCAACACCCTTGAGAACATGTAC +
Preference number: 3 (lower is better)
Translates to: KRAFQRGSPRDS*TLTCNTLENMY
Trigger: GTACATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGAGCCTCTCTGGAAAGCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 72 bp CGTGTCTCCTCTAATCCTCTTAACCTGGGCCTCCTTTaGAGCAGCAATGGTAAGAATCAAGGTTTCCTTTCT +
Preference number: 3 (lower is better)
Translates to: RVSSNPLNLGLL*SSNGKNQGFLS
Trigger: AGAAAGGAAACCTTGATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAGAGGAGACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 72 bp CCTCAACCCCTGAAGTTACATAGTTCAAGCATCATGTaGACGGGGTATGCTCCAATAGTCAATGCCACTCTT +
Preference number: 3 (lower is better)
Translates to: PQPLKLHSSSIM*TGYAPIVNATL
Trigger: AAGAGTGGCATTGACTATTGGAGCATACCCCGTCCACATGATGCTTGAACTATGTAACTTCAGGGGTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 72 bp ACACAGATGACATGTATCACAATTCTGCTCCAAATATaGTGTGGTCTGAGGACAGTGCTGTGCCTGGCCTTT +
Preference number: 3 (lower is better)
Translates to: TQMTCITILLQI*CGLRTVLCLAF
Trigger: AAAGGCCAGGCACAGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp TCCTTACCTGGGAAGAAGTATGGGATCTTCTTATCTTaGTCCCACAGGGTGAAGCCTTCCCTAATTTCCTGT +
Preference number: 3 (lower is better)
Translates to: SLPGKKYGIFLS*SHRVKPSLISC
Trigger: ACAGGAAATTAGGGAAGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCCATACTTCTTCCCAGGTAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR GCA 72 bp CAGAGAGGCTCTCCAAGGGATAGCTGCACACTTACTTaGAACACCCTTGAGAACATGTACTGTTACCTTAAT +
Preference number: 3 (lower is better)
Translates to: QRGSPRDSCTLT*NTLENMYCYLN
Trigger: ATTAAGGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGAGCCTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CCA 72 bp CTGTGCACCACATACACACCTGCGGGGCGGGACCTTTaGTATAAACGTTCAACGAGTTTTAAAGAATTGAAT +
Preference number: 3 (lower is better)
Translates to: LCTTYTPAGRDL*YKRSTSFKELN
Trigger: ATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACAGCTGCTCAAGTCCTaGGCCAGTATGTCAGTATGC +
Preference number: 3 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTQLLKS*ASMSVC
Trigger: GCATACTGACATACTGGCCAAGGACTTGAGCAGCTG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGCAGGGTCCATCCACATaGAATCAACTGTCTTATCTT +
Preference number: 3 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQQGPST*NQLSYL
Trigger: AAGATAAGACAGTTGATTCAATGTGGATGGACCCTG...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAGAACAAAAATTTCTCTaGGTACATTCCCAGCTTTCT +
Preference number: 3 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPEQKFL*VHSQLS
Trigger: AGAAAGCTGGGAATGTACCAAGAGAAATTTTTGTTC...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATTACTTGCAACACCCTaGAGAACATGTACTGTTACC +
Preference number: 3 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTLLATP*RTCTVT
Trigger: GGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTAA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGGCAGTTCTCTCTGCTTaGGATTCAAACCTTTTAATT +
Preference number: 3 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQAVLSA*DSNLLI
Trigger: AATTAAAAGGTTTGAATCCAAAGCAGAGAGAACTGC...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR TCA 72 bp TATTTCTTTACTACAAAGTGCACATTGCTGTGTTGCTaGGGTCTGTCCAAAAGAATGACCCCATTGAATTTT +
Preference number: 3 (lower is better)
Translates to: YFFTTKCTLLCC*GLSKRMTPLNF
Trigger: AAAATTCAATGGGGTCATTCTTTTGGACAGACCTCAGCAACACAGCAATGTGCACTTTGTAGTAAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CCA 72 bp TATCCAAATGATATAGATATCTTGACTGTTAAGAGTTaGAGACGTTTCAGAAGTTCTCACATACTCCTACGG +
Preference number: 3 (lower is better)
Translates to: YPNDIDILTVKS*RRFRSSHILLR
Trigger: CCGTAGGAGTATGTGAGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR-3UTR CAA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGAACAAAAATTTCTCTaGGTACATTCCCAGCTTTCT +
Preference number: 3 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTEQKFL*VHSQLS
Trigger: AGAAAGCTGGGAATGTACCAAGAGAAATTTTTGTTC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR TCA 72 bp CAAGTATCTCATTGTTCCTTTCTAGTTTCTGAATACTaGTTGACAATTGGCCTAATCATGGTGATTTCTCAA +
Preference number: 3 (lower is better)
Translates to: QVSHCSFLVSEY*LTIGLIMVISQ
Trigger: TTGAGAAATCACCATGATTAGGCCAATTGTCAATCAGTATTCAGAAACTAGAAAGGAACAATGAGATACTTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGCCGGAGGGCCTGGCTaGACTGCTGCCCCGGATCCC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPAGGPG*TAAPDP
Trigger: GGGATCCGGGGCAGCAGTGCAGCCAGGCCCTCCGGC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATCTGGCCCTGAGTGGCTaGGCCACCGGCGGCTCCGCA +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNLALSG*ATGGSA
Trigger: TGCGGAGCCGCCGGTGGCCCAGCCACTCAGGGCCAG...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCTCTGCCAAGGTGCTaGAGCGGCTCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQALPRC*SGSQQS
Trigger: TGACTGCTGAGAGCCGCTTCAGCACCTTGGCAGAGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGTGGGCAGAGGCACTTaGGGTGGAGGCATCACTGGC +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNVGRGT*GGGITG
Trigger: GCCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCAC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTTTGCTTTCGAGGCAGTaGTGGGGATCCACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPLLSRQ*WGSTRG
Trigger: GCCTCTAGTGGATCCCCAGCACTGCCTCGAAAGCAA...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCCCACTGATGGGCACTaGGCCCAGAGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQPTDGH*AQSCLL
Trigger: AAGAAGGCAGCTCTGGGCGCAGTGCCCATCAGTGGG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACGGGGGCAGCCTTGGCTaGAGAAGGCCAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYGGSLG*RRPARL
Trigger: CAGCCGGGCTGGCCTTCTCCAGCCAAGGCTGCCCCC...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGAGCTGCACGTCAGCTaGAGTGTGTTTCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPELHVS*SVFQSG
Trigger: CCCACTCTGAAACACACTCCAGCTGACGTGCAGCTC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCACTGGTGGTGGGGGTaGGGCACACTTTGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPHWWWG*GTLWFY
Trigger: GTAAAACCAAAGTGTGCCCCACCCCCACCACCAGTG...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCGTATGGAACAACAGATaGCGAGGAGGCGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGVWNNR*RGGGSP
Trigger: GGGAGAGCCGCCTCCTCGTCATCTGTTGTTCCATAC...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCCTGGGAAGGGTCATTaGCATCCTATCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIPGKGH*HPILLW
Trigger: CCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGG...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGTGGTTGTGAGTGGTTaGGAGGACGGGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNVVVSG*EDGGSL
Trigger: AAGGCTGCCCCCGTCCTCCCAACCACTCACAACCAC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGAGGTGGAGGCATCACTaGCCTCCCAGCTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQRWRHH*PPSFPT
Trigger: AGTGGGAAAGCTGGGAGGCCAGTGATGCCTCCACCT...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAGGTGGAGGCATCACTaGCCTCCCAGCTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGRWRHH*PPSFPT
Trigger: AGTGGGAAAGCTGGGAGGCCAGTGATGCCTCCACCT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGAGAGCTGGTTTCTCTaGCCCTCATCTACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPESWFL*PSSTRS
Trigger: GCTTCTGGTAGATGAGGGCCAGAGAAACCAGCTCTC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCAAGAGGCTGCTGGGTaGCTTGTCTCTTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIQEAAG*LVSLLS
Trigger: CGAAAGCAAAGAGACAAGTCACCCAGCAGCCTCTTG...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGCTGATTTTGTCTGCTaGGATTTTCTCAGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPADFVC*DFLSGL
Trigger: CAGGCCGCTGAGAAAATCTCAGCAGACAAAATCAGC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGGGATCTTCTTATCTTaGTCCCACAGGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPGIFLS*SHRVKP
Trigger: AGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTCCACTAGAGGCCTGTaGACCTCTGATGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQSTRGL*TSDEPW
Trigger: CCAGGGTTCATCAGAGGTGCACAGGCCTCTAGTGGA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCCTGGGAAGGGTCATTaGCATCCTATCCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQPGKGH*HPILLW
Trigger: CCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTAGGGCCTGGCTGCACTaGTGCCCCGGATCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFRAWLH*CPGSRG
Trigger: CCCGCGGGATCCGGGGCAGCAGTGCAGCCAGGCCCT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTCACCCAGGCTGGAGTaGAGTGGCGCGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVSPRLE*SGAIWA
Trigger: AGCCCAGATCGCGCCACTGCACTCCAGCCTGGGTGA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTGGAGTTTGGACCTCTaGCAGTTCCTGGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQWSLDL*QFLGRV
Trigger: GACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGGACGGGGGCAGCCTTaGCTGGAGAAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSGRGQP*LEKASP
Trigger: CGGGCTGGCCTTCTCCAGCCAAGGCTGCCCCCGTCC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTGGCAGGAAAGAAGGTaGGAGAAGGACCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIWQERR*EKDRWF
Trigger: AAACCAGCGGTCCTTCTCCCACCTTCTTTCCTGCCA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCTGCGGCCGGAGGGCCTaGCTGCACTGCTGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSCGRRA*LHCCPG
Trigger: TCCGGGGCAGCAGTGCAGCCAGGCCCTCCGGCCGCA...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTGGCACTTTGTGGTTGTaGGTGGTTGGGAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVGTLWL*VVGRTG
Trigger: CCCCGTCCTCCCAACCACTCACAACCACAAAGTGCC...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCCAGAGGATGTGACCTaGTGCTCAGATAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIPEDVT*CSDKSL
Trigger: CAAGCTCTTATCTGAGCATCAGGTCACATCCTCTGG...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAGTGCCTCTTTAACCTaGACCTTGAGCCCTCAACCC +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGSASLT*TLSPQP
Trigger: GGGTTGAGGGCTCAAGGTTCAGGTTAAAGAGGCACT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCCCTGTCAACCCAATATaGACTCCTGGTAGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGPVNPI*TPGRGT
Trigger: TGTGCCCCTACCAGGAGTTCATATTGGGTTGACAGG...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCGAAACCTGTAGCTCCTaGAGGCTGAGTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIETCSS*RLSSSL
Trigger: CAAACTGGAACTCAGCCTGCAGGAGCTACAGGTTTC...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTACGCGGCCCACCTGCTaGCCCATCCCTGCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFTRPTC*PIPALA
Trigger: CGCGAGAGCAGGGATGGGGCAGCAGGTGGGCCGCGT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATAGTCATGGGGGTGAGTaGTCCAGAGTAGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNSHGGE*SRVGCS
Trigger: GCTACAGCCTACTCTGGAGCACTCACCCCCATGACT...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAGGCACGAGCCACTGTaGCCAGCCAAAAGGTATCAT +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGRHEPL*PAKRYH
Trigger: ATGATACCTTTTGGCTGGGCACAGTGGCTCGTGCCT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCGTCCCCTGGCGTTCTTaGCACTCACAATACCTGGTA +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGVPWRS*HSQYLV
Trigger: TACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGAC...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAAACCTCACCCTCTGTaGACCACATACACACCTGCG +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGKPHPL*TTYTPA
Trigger: CGCAGGTGTGTATGTGGTGCACAGAGGGTGAGGTTT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTAGCTGCTCAAGTCCTTaGCCAGTATGTCAGTATGCA +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPSCSSP*PVCQYA
Trigger: TGCATACTGACATACTGGCCAAGGACTTGAGCAGCT...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCTGATTTTGTCTGCTaGGATTTTCTCAGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQADFVC*DFLSGL
Trigger: CAGGCCGCTGAGAAAATCTCAGCAGACAAAATCAGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTGGGCACAGGTTCCGTaGGTGCACTGGACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVWAQVP*VHWTVG
Trigger: ACCTACTGTCCAGTGCACTCACGGAACCTGTGCCCA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCCATGTGGACGGGGTATaGTCCAATAGTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGHVDGV*SNSQCH
Trigger: GTGGCATTGACTATTGGAGCATACCCCGTCCACATG...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACGGCAGCCGCCGCGCTaGCTCCAGGCGACTCACAGA +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKRQPPR*LQATHR
Trigger: TCTGTGAGTCGCCTGGAGGCAGCGCGGCGGCTGCCG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATCTTGGTCTCCCAAAGTaGTGGGATTACAGGCACGAG +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNLGLPK*WDYRHE
Trigger: CTCGTGCCTGTAATCCCAGCACTTTGGGAGACCAAG...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTGGGCACGACAGCAATaGACGTGTATTTATGGACAC +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIWARQQ*TCIYGH
Trigger: GTGTCCATAAATACACGTGCATTGCTGTCGTGCCCA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCATCAGCCACTGTaGAGTGATGGTGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNAHQPL*SDGVQA
Trigger: AGCTTGTACACCATCACTCCACAGTGGCTGATGGGC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCGCCACTTTTACCACATaGTTTTCTCCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIATFTT*FSPTRQ
Trigger: CTGCCTAGTGGGAGAAAACCATGTGGTAAAAGTGGC...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTGGACGGGGGCAGCCTTaGCTGGAGAAGGCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFGRGQP*LEKASP
Trigger: CGGGCTGGCCTTCTCCAGCCAAGGCTGCCCCCGTCC...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTGCCATTGGCCATTTTaGCTGGCGAGATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQCHWPF*LARWKM
Trigger: CATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCAACCTGGGCCTCCTTTaGAGCAGCAATGGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLINLGLL*SSNGKN
Trigger: ATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCAAACTGTCAACGCCTTaGACAAGGGCCTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIKLSTP*TRAFAH
Trigger: ATGAGCAAAGGCCCTTGTCCAAGGCGTTGACAGTTT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCAAAGGAATCAAGCAGTaGCAGCCCAAAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIKGIKQ*QPKGMH
Trigger: ATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTGTCATCACTGGCTGTaGGTTTACCTGCTCGTAAGC +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQCHHWL*VYLLVS
Trigger: GCTTACGAGCAGGTAAACCCACAGCCAGTGATGACA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAGCCTCCCCAGTAGCTaGGACTACAGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQESLPSS*DYRRPP
Trigger: TGGCGGGCGCCTGTAGTCCCAGCTACTGGGGAGGCT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATCACAGATGGAGGATCTaGCCACTGCCATCTGAGAAG +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNHRWRI*PLPSEK
Trigger: CTTCTCAGATGGCAGTGGCCAGATCCTCCATCTGTG...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGTGTTTCAGAGTGGGTaGGATAAGGACTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQVFQSG*DKDWHF
Trigger: AAAGTGCCAGTCCTTATCTCACCCACTCTGAAACAC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTCCCAGCTTTCCCACTaGTGGGCACTGCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSSQLSH*WALRPE
Trigger: CTCTGGGCGCAGTGCCCATCAGTGGGAAAGCTGGGA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGTCCCAGCTTTCCCACTaGTGGGCACTGCGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTESQLSH*WALRPE
Trigger: CTCTGGGCGCAGTGCCCATCAGTGGGAAAGCTGGGA...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCTCAGAGAGGTGGCATaGAAAGCAGAAATTCATCCG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQLREVA*KAEIHP
Trigger: CGGATGAATTTCTGCTTTTCATGCCACCTCTCTGAG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTGCTGCTCCCTCAGAGTaGACAGGGCTTTGCTACTCT +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVAAPSE*TGLCYS
Trigger: AGAGTAGCAAAGCCCTGTTCACTCTGAGGGAGCAGC...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGCTCCACTTCCAGCATaGTCTCATAAGTTCATAAAC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPAPLPA*SHKFIN
Trigger: GTTTATGAACTTATGAGAGCATGCTGGAAGTGGAGC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAACAGTGGCTACCTCTaGACCACATCACTGATTTCC +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGNSGYL*TTSLIS
Trigger: GGAAATCAGTGATGTGGTGCAGAGGTAGCCACTGTT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTCTGCTGCCCCATCCCTaGTCTCGCGTACTCCCGCGC +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSALLPHP*SRVLPR
Trigger: GCGCGGGAGTACGCGAGAGCAGGGATGGGGCAGCAG...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCCTCATTTAGTGCCTaGGGTTCAACATCACAACCA +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQASFSA*GSTSQP
Trigger: TGGTTGTGATGTTGAACCCCAGGCACTAAATGAGGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCCACTTTTACCACATaGTTTTCTCCCACTAGGCAG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQATFTT*FSPTRQ
Trigger: CTGCCTAGTGGGAGAAAACCATGTGGTAAAAGTGGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGACTGCTCTCCATCCTCTaGAACTCCAGCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARLLSIL*NSSHPK
Trigger: CTTGGGATGGCTGGAGTTCCAGAGGATGGAGAGCAG...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGAGCTGCTCAAGTCCTTaGCCAGTATGTCAGTATGCA +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQSCSSP*PVCQYA
Trigger: TGCATACTGACATACTGGCCAAGGACTTGAGCAGCT...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCAGTTCAAGCATCATGTaGACGGGGTATGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLISSSIM*TGYAPI
Trigger: TATTGGAGCATACCCCGTCCACATGATGCTTGAACT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAAACTGTCAACGCCTTaGACAAGGGCCTTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGKLSTP*TRAFAH
Trigger: ATGAGCAAAGGCCCTTGTCCAAGGCGTTGACAGTTT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAAAGGAATCAAGCAGTaGCAGCCCAAAGGCATGCAT +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGKGIKQ*QPKGMH
Trigger: ATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTACTGGAGAATACACTaGCCGAGACCCCAGCCCACT +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVYWRIH*PRPQPT
Trigger: AGTGGGCTGGGGTCTCGGCCAGTGTATTCTCCAGTA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCTCCAAATATGGTGTaGTCTGAGGACAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNAPNMV*SEDSAV
Trigger: CACAGCACTGTCCTCAGACCACACCATATTTGGAGC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTCACGTCCCTCGTACCTaGGCGAGATGGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFHVPRT*ARWTAA
Trigger: GGCAGCTGTCCATCTCGCTCAGGTACGAGGGACGTG...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTTTGACAGTGTATCAATaGCAGAGCCAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPLTVYQ*QSQKKT
Trigger: AGTTTTCTTCTGGCTCTGTCATTGATACACTGTCAA...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCGCTTGTATAGTAAGTTaGCAGTGCCTCTTTAACCTG +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIACIVS*QCLFNL
Trigger: CAGGTTAAAGAGGCACTGTCAACTTACTATACAAGC...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCGGATCCCGCGGGGCTaGGGCTGCTGGAGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTRIPRG*GCWSPG
Trigger: TCCGGGGCTCCAGCAGCCTCAGCCCCGCGGGATCCG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCAATCTCCTGACCTCGTaGTCCACCCGCCTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCNLLTS*STRLSP
Trigger: GGGGCTGAGGCGGGTGGATCACGAGGTCAGGAGATT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCGCCAAATGGCCACAGTaGGAAATTGCTGTCAAAATG +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGAKWPQ*EIAVKM
Trigger: CATTTTGACAGCAATTTCTCACTGTGGCCATTTGGC...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGAGGTGACTTGTCTCTTTaGTTTCGAGGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARGDLSL*FRGSAG
Trigger: CCCAGCACTGCCTCGAAAGCAAAGAGACAAGTCACC...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQFPIFQ*SFQPCP
Trigger: TGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTTGTAGCACTCTGATTTaGAGTTCTTATTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPCSTLI*SSYYSS
Trigger: GCTGCTGTAATAAGAACTGCAAATCAGAGTGCTACA...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCAACACCTGCCAGGAATaGCCAGCACCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPNTCQE*PAPRVS
Trigger: GGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCTACAAAGTGCACATTaGTGTGTTGCTGAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQLQSAH*CVAEVC
Trigger: ACAGACCTCAGCAACACAGCAATGTGCACTTTGTAG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCGCCATAACTATTAGGTaGAAGGAGAACTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGAITIR*KENCPK
Trigger: CTTGGGACAGTTCTCCTTCCACCTAATAGTTATGGC...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGTAGGCAAGACTCTCTaGTGCTGTCCACTTAATAGG +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNVGKTL*CCPLNR
Trigger: CCTATTAAGTGGACAGCACCAGAGAGTCTTGCCTAC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTGGGAGAAGGACCGCTaGTTTTTACATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQWEKDR*FLHLSS
Trigger: AGAACTCAGATGTAAAAACCAGCGGTCCTTCTCCCA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACGCGGATTCTCACAGATaGAGGATCTGGCCACTGCCA +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYADSHR*RIWPLP
Trigger: TGGCAGTGGCCAGATCCTCCATCTGTGAGAATCCGC...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCCACTCACAATACCTaGTATGGTACTTCTGAACTG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQATHNT*YGTSEL
Trigger: CAGTTCAGAAGTACCATACCAGGTATTGTGAGTGGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGAGCGGGGCGGGACCTTTaGTATAAACGTTCAACGAGT +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARAGRDL*YKRSTS
Trigger: ACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCTGCTGCAGTCTTGCTaGGAGCAGCCCTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHLLQSC*EQPCLA
Trigger: TGCTAGGCAGGGCTGCTCTCAGCAAGACTGCAGCAG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACTGGTTAATGCTCTaGATGCTACCAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQHWLML*MLPGIK
Trigger: CTTTATTCCTGGTAGCATTCAGAGCATTAACCAGTG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCCTCAGTGCTCAATGTTaGATTCCTATCTTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGLSAQC*IPIFLS
Trigger: GCTTAGGAAGATAGGAATTCAACATTGAGCACTGAG...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTGCTGCAACTGCAGGTaGCATACTGCGGGGATCACC +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSCCNCR*HTAGIT
Trigger: GGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTCTCGCCAGGTGGGCTTaGGAAACGCAGCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSLARWA*ETQQLP
Trigger: TGGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAG...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATCAAGGACCATACCTCTaGCCAGAAGCACAAAAGTTA +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNQGPYL*PEAQKL
Trigger: TAACTTTTGTGCTTCTGGGCAGAGGTATGGTCCTTG...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTCCCACTGATGGGCACTaGGCCCAGAGCTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFPTDGH*AQSCLL
Trigger: AAGAAGGCAGCTCTGGGCGCAGTGCCCATCAGTGGG...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTAGCCCCAGGTCTGGGTaGAGCTGCTGCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFSPRSG*SCCSLA
Trigger: AGCAAGACTGCAGCAGCTGCACCCAGACCTGGGGCT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTACAATCCCTTAACTTaGATCCCACAACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQYNPLT*IPQQQG
Trigger: TCCCTGTTGTTGTGGGATGCAAGTTAAGGGATTGTA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGAGAGAAACGCAGCAACTaGCAAGTGAACACTCTCAGG +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPAREKRSN*QVNTLR
Trigger: CCTGAGAGTGTTCACTTGGCAGTTGCTGCGTTTCTC...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAACTTTCGAGGCAGTGCTaGGGATCCACTAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQELSRQC*GSTRGL
Trigger: CAGGCCTCTAGTGGATCCCCAGCACTGCCTCGAAAG...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACCTGGCTGAGAAGAGGTaGACACTGTCCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYLAEKR*TLSFPA
Trigger: AGCTGGAAAGGACAGTGTCCACCTCTTCTCAGCCAG...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCTTTGTGGTTGTGAGTaGTTGGGAGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSLCGCE*LGGRGQ
Trigger: CTGCCCCCGTCCTCCCAACCACTCACAACCACAAAG...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGATGCCATTGGCCATTTTaGCTGGCGAGATGGAAGATG +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARCHWPF*LARWKM
Trigger: CATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCA...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGTCACATACAGGCCACTaGGTTTCAAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQSHTGH*VSRKDH
Trigger: ATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGA...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGATTCCCAGGGTCTACCTaGTGCTCCCTGAAAATGACT +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARFPGST*CSLKMT
Trigger: AGTCATTTTCAGGGAGCACCAGGTAGACCCTGGGAA...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGAATTCTGATCTGGAGTaGGGCTATTCCGTCAGTTTT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQNSDLE*GYSVSF
Trigger: AAAACTGACGGAATAGCCCCACTCCAGATCAGAATT...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACACATGGCAGCAGGTATaGTGGAAAGACCCCACAACC +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYTWQQV*WKDPTT
Trigger: GGTTGTGGGGTCTTTCCACCATACCTGCTGCCATGT...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATGTATGGAACAACAGATaGCGAGGAGGCGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHVWNNR*RGGGSP
Trigger: GGGAGAGCCGCCTCCTCGTCATCTGTTGTTCCATAC...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCTCTTCTGTAGGGTCTaGGCAGATGGACGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTELFCRV*ADGRML
Trigger: CAGCATCCGTCCATCTGCTCAGACCCTACAGAAGAG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCACTGCTGCAGTCTTGCTaGGAGCAGCCCTGCCTAGCA +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPLLQSC*EQPCLA
Trigger: TGCTAGGCAGGGCTGCTCTCAGCAAGACTGCAGCAG...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATTACTTGCAACACCCTTaGGAACATGTACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNYLQHP*EHVLLP
Trigger: AGGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTA...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAACTCCTGACCTCAAGTaGTCCGCCCATCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQETPDLK*SAHLGL
Trigger: GAGACCAAGATGGGCGGATCACTTGAGGTCAGGAGT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTAGGTCTGGGTGCAGCTaGTGCAGTCTTGCTGAGAGC +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSRSGCS*CSLAES
Trigger: GCTCTCAGCAAGACTGCAGCAGCTGCACCCAGACCT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAAGCCCCAGGTCTGGGTaGAGCTGCTGCAGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKSPRSG*SCCSLA
Trigger: AGCAAGACTGCAGCAGCTGCACCCAGACCTGGGGCT...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCTGCAGGTGACATACTaGGGGGATCACCCAACACCT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSLQVTY*GDHPTP
Trigger: AGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAG...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCCGACGCGGCCCACCTaGTGCCCCATCCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTPTRPT*CPIPAL
Trigger: GAGAGCAGGGATGGGGCAGCAGGTGGGCCGCGTCGG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGAACACTTGCTATACCTaGTCATACCTGTTAAGCAGT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQNTCYT*SYLLSS
Trigger: ACTGCTTAACAGGTATGAGCAGGTATAGCAAGTGTT...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCTCACTTAGGCTGGAGTaGAGCGGCGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCSLRLE*SGAISA
Trigger: AGCTGAGATCGCGCCGCTGCACTCCAGCCTAAGTGA...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCTGAGGACAGTGCTGTaGCTGGCCTTTCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSLRTVL*LAFPLQ
Trigger: TTGAAGGGGAAAGGCCAGGCACAGCACTGTCCTCAG...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATCACAATGTAAAATGGTaGCTCCAAAGTACACACACC +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNHNVKW*LQSTHT
Trigger: GGTGTGTGTACTTTGGAGCCACCATTTTACATTGTG...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATAAGCAGAATTTTCTGTaGCATCTTGTGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNKQNFL*HLVPLQ
Trigger: TTGAAGGGGCACAAGATGCCACAGAAAATTCTGCTT...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCCTTTCGAGGCAGTGCTaGGGATCCACTAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCLSRQC*GSTRGL
Trigger: CAGGCCTCTAGTGGATCCCCAGCACTGCCTCGAAAG...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGGGGGCAGCCTTGGCTaGAGAAGGCCAGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTGGSLG*RRPARL
Trigger: CAGCCGGGCTGGCCTTCTCCAGCCAAGGCTGCCCCC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTCTTTGTGGTTGTGAGTaGTTGGGAGGACGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFLCGCE*LGGRGQ
Trigger: CTGCCCCCGTCCTCCCAACCACTCACAACCACAAAG...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTCAGAGGCACTTGAGGTaGAGGCATCACTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFQRHLR*RHHWPP
Trigger: GGGAGGCCAGTGATGCCTCCACCTCAAGTGCCTCTG...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGGCTATAATTCAGAAGTaGCCACCAAGGCAATTTACT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQAIIQK*PPRQFT
Trigger: AGTAAATTGCCTTGGTGGCCACTTCTGAATTATAGC...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGGGACAGTGCTGTGCCTaGCCTTTCCCCTTCAACACG +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPGQCCA*PFPFNT
Trigger: CGTGTTGAAGGGGAAAGGCCAGGCACAGCACTGTCC...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGAAATTGCTGTCAAAATaGAGGAGAGCTGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQKLLSK*RRAGFS
Trigger: AGAGAAACCAGCTCTCCTCCATTTTGACAGCAATTT...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGCACAGGCAGCAAAGTaGAGTGTCCTGATCTCTGCC +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCAQAAK*SVLISA
Trigger: GGCAGAGATCAGGACACTTCACTTTGCTGCCTGTGC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR TCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGGCTCTGCCAAGGTGCTaGAGCGGCTCTCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQALPRC*SGSQQS
Trigger: TGACTGCTGAGAGCCGCTTCAGCACCTTGGCAGAGC...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCGCAGTCCACATAGCCTaGGCAGTAGTCAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSAVHIA*AVVKQL
Trigger: CAGCTGCTTGACTACTGCTCAGGCTATGTGGACTGC...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATGCTGCAACTGCAGGTaGCATACTGCGGGGATCACC +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPCCNCR*HTAGIT
Trigger: GGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTACTGAGTCATGGGGGTaGGTGCTCCAGAGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSATESWG*VLQSRL
Trigger: CAGCCTACTCTGGAGCACTCACCCCCATGACTCAGT...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGACTGGTATGGTACTTCTaGACTGTGCAGAACAGTATC +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARLVWYF*TVQNSI
Trigger: GATACTGTTCTGCACAGTTCAGAAGTACCATACCAG...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGATACTCAGCTGCACTaGGTGACACAGGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSDTQLH*VTQVHG
Trigger: ACCATGGACCTGTGTCACGCAGTGCAGCTGAGTATC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTGTACCAGATTAGGATaGTTGATTTCCTTCATTACT +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLICTRLG*LISFIT
Trigger: AGTAATGAAGGAAATCAAGCATCCTAATCTGGTACA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTTTGCTTTCGAGGCAGTaGTGGGGATCCACTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFLLSRQ*WGSTRG
Trigger: GCCTCTAGTGGATCCCCAGCACTGCCTCGAAAGCAA...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAATGCGAGTTTGAGGGATaGAGTCCACATAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQECEFEG*SPHSLS
Trigger: GCTCAGGCTATGTGGACTGCATCCCTCAAACTCGCA...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGAGCCACAGTGAGAAATTaGTGTCAAAATGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARATVRN*CQNGGE
Trigger: CTCTCCTCCATTTTGACAGCAATTTCTCACTGTGGC...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACACCACATACACACCTaGGGGGCGGGACCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKHHIHT*GAGPLV
Trigger: TACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGAAATGCTGGAGTCATaGAACATGGTTTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNEMLES*NMVSKA
Trigger: AGCTTTTGAAACCATGTTCCATGACTCCAGCATTTC...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCATCCTATCCTGCTCTaGAAGCCCCGTGAGTTCGTA +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPHPILL*KPREFV
Trigger: TACGAACTCACGGGGCTTCCAGAGCAGGATAGGATG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTGGAGTTTGGACCTCTaGCAGTTCCTGGGAAGGGTC +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHWSLDL*QFLGRV
Trigger: GACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTTCTTCTCTTTACCCTTaGGGGCAGCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFSSLYP*GQLPLQ
Trigger: CTGGAGTGGCAGCTGCCCCCAAGGGTAAAGAGAAGA...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTCACTGGTGGTGGGGGTaGGGCACACTTTGGTTTTAC +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSHWWWG*GTLWFY
Trigger: GTAAAACCAAAGTGTGCCCCACCCCCACCACCAGTG...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTACCTGCTGTGCCATTaGCCATTTTGGCTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSYLLCH*PFWLAR
Trigger: TCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTCCAGTGTCTACCAGCTaGCTGTTGGGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAPVSTS*LLGTGS
Trigger: GGAACCTGTGCCCAACAGCCAGCTGGTAGACACTGG...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGAAGTTCAAGCATCATGTaGACGGGGTATGCTCCAATA +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARSSSIM*TGYAPI
Trigger: TATTGGAGCATACCCCGTCCACATGATGCTTGAACT...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCGGTTTGTGTTTAAGCTaGTCCTTTTCAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIGLCLS*SFSSRK
Trigger: TTTTCTACTTGAAAAGGACCAGCTTAAACACAAACC...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGCCCCCGCCGACCCCTaGTCACATTCCTCCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLAPADP*SHSSSA
Trigger: AGCCGAGGAGGAATGTGACCAGGGGTCGGCGGGGGC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCATCCTCCACACAGCTaGCAAAGTGATCATGCTGGG +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPHPPHS*QSDHAG
Trigger: CCCAGCATGATCACTTTGCCAGCTGTGTGGAGGATG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAGCATCTCTGTCCCCTaGCGTTCTTGCCACTCACAA +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQESISVP*RSCHSQ
Trigger: TTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 72 bp CTCATCTACCAGAAGCATCTCTGTCCCCTGGCGTTCTaGCCACTCACAATACCTGGTATGGTACTTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LIYQKHLCPLAF*PLTIPGMVLLN
Trigger: GTTCAGAAGTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCTGGTAGATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATCAGCCACTGTGGAGTaGTGGTGTACAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPSATVE*WCTSSA
Trigger: GGCAGAGCTTGTACACCATCACTCCACAGTGGCTGA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAATCAGCCACTGTGGAGTaGTGGTGTACAAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKSATVE*WCTSSA
Trigger: GGCAGAGCTTGTACACCATCACTCCACAGTGGCTGA...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCAAGAGGCTGCTGGGTaGCTTGTCTCTTTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHQEAAG*LVSLLS
Trigger: CGAAAGCAAAGAGACAAGTCACCCAGCAGCCTCTTG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAACCTTCCTATCCCTGGTaGAGCATGTCTCTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQEPSYPW*SMSLWH
Trigger: ATGCCAAAGAGACATGCTTCACCAGGGATAGGAAGG...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTCTCTTCTGTAGGGTCTaGGCAGATGGACGGATGCTG +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFLFCRV*ADGRML
Trigger: CAGCATCCGTCCATCTGCTCAGACCCTACAGAAGAG...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTGCCCACTGGGAATTCTaGTCTGGAGTGGGGCTATTC +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAAHWEF*SGVGLF
Trigger: GAATAGCCCCACTCCAGATCAGAATTCCCAGTGGGC...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGCTGGCCACTGCCATCTaGGAAGCTCGTGTCTACCAG +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQLATAI*EARVYQ
Trigger: CTGGTAGACACGAGCTTCTCAGATGGCAGTGGCCAG...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTAAATATGGTGTGGTCTaGGGACAGTGCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFKYGVV*GQCCAW
Trigger: CCAGGCACAGCACTGTCCTCAGACCACACCATATTT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTCCAGCTATACAGATCTaGGATGAGAGGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVPAIQI*DERVFK
Trigger: TTTGAAAACCCTCTCATCTCAGATCTGTATAGCTGG...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGATACTCAGCTGCACTaGGTGACACAGGTCCATGGT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCDTQLH*VTQVHG
Trigger: ACCATGGACCTGTGTCACGCAGTGCAGCTGAGTATC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACTTCTGTGGCATCTTGTaGCCCTTCAATGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYFCGIL*PFNVLL
Trigger: AAGGAGAACATTGAAGGGGCACAAGATGCCACAGAA...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATCCACTAGAGGCCTGTaGACCTCTGATGAACCCTGG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPSTRGL*TSDEPW
Trigger: CCAGGGTTCATCAGAGGTGCACAGGCCTCTAGTGGA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGAGCCATCCCAAGTCGTaGCCCACCATTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTESHPKS*PTILLF
Trigger: AAAGAGAAGAATGGTGGGGCACGACTTGGGATGGCT...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGTCTGTGCCAATGAGCTaGACGTCAGCTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPSVPMS*TSAGVC
Trigger: ACACACTCCAGCTGACGTGCAGCTCATTGGCACAGA...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCGAGCAGATGGACGGATaGTGCAGTAGTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPEQMDG*CSSLIT
Trigger: AGTGATGAGACTACTGCAGCATCCGTCCATCTGCTC...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCAGGTAGGGATGGGCTaGATTGCCTTCCTTATGACA +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSQVGMG*IAFLMT
Trigger: TGTCATAAGGAAGGCAATGCAGCCCATCCCTACCTG...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGTCTGGGTGCAGCTGCTaGAGTCTTGCTGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQSGCSC*SLAESS
Trigger: GCTGCTCTCAGCAAGACTGCAGCAGCTGCACCCAGA...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCCAGGGTCTACCTGGTaGTCCCTGAAAATGACTACT +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEPGSTW*SLKMTT
Trigger: AGTAGTCATTTTCAGGGAGCACCAGGTAGACCCTGG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTAACCCAATCACTAGCTaGCTGTGCTGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSNPITS*LCCNCR
Trigger: CCTGCAGTTGCAGCACAGGCAGCTAGTGATTGGGTT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAGGGTTCAAGCAATTCTaGCTCAGCCTCGGGAGTAGC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKGFKQF*LSLGSS
Trigger: GCTACTCCCGAGGCTGAGGCAGAATTGCTTGAACCC...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGGCCCATCAGCCACTGTaGAGTGATGGTGTACAAGCT +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPAHQPL*SDGVQA
Trigger: AGCTTGTACACCATCACTCCACAGTGGCTGATGGGC...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCTTTCCAGCTGGAGTTTaGACCTCTGGCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSFPAGV*TSGSSW
Trigger: CCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAA...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCTCTGGGCAATAACTTaGCTTTTGGTCTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTELWAIT*LLVSPC
Trigger: GCAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGAGCTGTGGCTCCTCTaGGCAATAACTTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSELWLL*AITWLL
Trigger: CAAAAGCCAAGTTATTGCCCAGAGGAGCCACAGCTC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATCTTCTCTTTACCCTTaGGGGCAGCTGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPSSLYP*GQLPLQ
Trigger: CTGGAGTGGCAGCTGCCCCCAAGGGTAAAGAGAAGA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCACTGCTCTCCATCCTCTaGAACTCCAGCCATCCCAAG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPLLSIL*NSSHPK
Trigger: CTTGGGATGGCTGGAGTTCCAGAGGATGGAGAGCAG...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAGAGCTGCACGTCAGCTaGAGTGTGTTTCAGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPELHVS*SVFQSG
Trigger: CCCACTCTGAAACACACTCCAGCTGACGTGCAGCTC...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTTCCCAGGGTCTACCTaGTGCTCCCTGAAAATGACT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSFPGST*CSLKMT
Trigger: AGTCATTTTCAGGGAGCACCAGGTAGACCCTGGGAA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTGGAAGTGTCATCACTaGCTGTGGGTTTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPWKCHH*LWVYLL
Trigger: GAGCAGGTAAACCCACAGCCAGTGATGACACTTCCA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATTTGACTGTTAAGAGTTaGAGACGTTTCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNLTVKS*RRFRSS
Trigger: AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAA...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCACAAATCTCCAAGGGTaGCCTCTCAGCAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPTNLQG*PLSSFC
Trigger: GCAGAAACTGCTGAGAGGCCACCCTTGGAGATTTGT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTGAATCCGCATGTTTaGGGACAAAGTTCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVLNPHV*GQSSVN
Trigger: GTTGACAGAACTTTGTCCCCAAACATGCGGATTCAA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCACGTCCCTCGTACCTaGGCGAGATGGACAGCTGCC +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTHVPRT*ARWTAA
Trigger: GGCAGCTGTCCATCTCGCTCAGGTACGAGGGACGTG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCCCTTCCTATCCCTGGTaGAGCATGTCTCTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCPSYPW*SMSLWH
Trigger: ATGCCAAAGAGACATGCTTCACCAGGGATAGGAAGG...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCACATTCTCTTCTGGCTaGGAAGAGGTGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSTFSSG*EEVDTV
Trigger: GACAGTGTCCACCTCTTCTCAGCCAGAAGAGAATGT...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGGCACTTTGTGGTTGTaGGTGGTTGGGAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFGTLWL*VVGRTG
Trigger: CCCCGTCCTCCCAACCACTCACAACCACAAAGTGCC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTCCTTCCTGTGTTTCTaGTGTGGACTGTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSFLCF*CGLSCS
Trigger: ACTGCAGGACAGTCCACATCAGAAACACAGGAAGGA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGTCCTTCCTGTGTTTCTaGTGTGGACTGTCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPSFLCF*CGLSCS
Trigger: ACTGCAGGACAGTCCACATCAGAAACACAGGAAGGA...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGTGGGCAGAGGCACTTaGGGTGGAGGCATCACTGGC +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTVGRGT*GGGITG
Trigger: GCCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCAC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACGCATTGCCTTCCTTATaGCATACACATGTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYALPSL*HTHVPY
Trigger: ATAGGGAACATGTGTATGTCATAAGGAAGGCAATGC...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTGATCCTGGTCCATTATaGAATAATATACCAGACTGG +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVDPGPL*NNIPDW
Trigger: CCAGTCTGGTATATTATTTCATAATGGACCAGGATC...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCACTTGCTGGGCAGGAGTaGAAGAGAACCCATCAGCAT +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPLAGQE*KRTHQH
Trigger: ATGCTGATGGGTTCTCTTTCACTCCTGCCCAGCAAG...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCTTGTCCCACAGCCCTaGATCCCACCCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLVPQP*IPPMLL
Trigger: GAGAAGCATGGGTGGGATTCAGGGCTGTGGGACAAG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAAGCTTCTGGACTACTaGCTCCAGTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHKLLDY*LQSCLP
Trigger: AGGGAGACAAGACTGGAGGCAGTAGTCCAGAAGCTT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGTAGAGCAGCACAACTaGAGTCACCTCTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCVEQHN*SHLFSV
Trigger: AACCGAGAAGAGGTGACTGCAGTTGTGCTGCTCTAC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCATCTTCCAAGAGGCTaGTGGGTGACTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPHLPRG*WVTCLF
Trigger: AAAGAGACAAGTCACCCAGCAGCCTCTTGGAAGATG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAATGCGAGTTTGAGGGATaGAGTCCACATAGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKCEFEG*SPHSLS
Trigger: GCTCAGGCTATGTGGACTGCATCCCTCAAACTCGCA...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACGGTACTTCTGAACTGTaGAGAACAGTATCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYGTSEL*RTVSEV
Trigger: AACCTCAGATACTGTTCTGCACAGTTCAGAAGTACC...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTATTAGAGAATCAGACTaGAGAGAAGGAAAAGTGCAG +
Preference number: 4 (lower is better)
Translates to: APHTHLRGGTFGINVQRVIRESD*REGKVQ
Trigger: CTGCACTTTTCCTTCTCTGCAGTCTGATTCTCTAAT...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACTGGCTGAGAAGAGGTaGACACTGTCCTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKLAEKR*TLSFPA
Trigger: AGCTGGAAAGGACAGTGTCCACCTCTTCTCAGCCAG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCCTCTGGGCAATAACTTaGCTTTTGGTCTCTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSLWAIT*LLVSPC
Trigger: GCAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAG...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTGAGCTGTGGCTCCTCTaGGCAATAACTTGGCTTTTG +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSELWLL*AITWLL
Trigger: CAAAAGCCAAGTTATTGCCCAGAGGAGCCACAGCTC...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGTGGTTGTGAGTGGTTaGGAGGACGGGGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFVVVSG*EDGGSL
Trigger: AAGGCTGCCCCCGTCCTCCCAACCACTCACAACCAC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAATTTTGGCTGGCGAGATaGAAGATGTGGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKFWLAR*KMWAEA
Trigger: TGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAA...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTTTTTGGCTGGCGAGATaGAAGATGTGGGCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAFWLAR*KMWAEA
Trigger: TGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAA...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTATTGGCCATTTTGGCTaGCGAGATGGAAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSIGHFG*RDGRCG
Trigger: CCCACATCTTCCATCTCGCCAGCCAAAATGGCCAAT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCAACCTGGGCCTCCTTTaGAGCAGCAATGGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSNLGLL*SSNGKN
Trigger: ATTCTTACCATTGCTGCTCCAAAGGAGGCCCAGGTT...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCTAATCCTCTTAACCTaGGCCTCCTTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHLILLT*ASFGAA
Trigger: TGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCCTGGGAATTCTGATCTaGAGTGGGGCTATTCCGTCA +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSLGILI*SGAIPS
Trigger: TGACGGAATAGCCCCACTCCAGATCAGAATTCCCAG...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCATCTGCAGTGGTATTaGTCCTGTAGTGATACACAC +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEHLQWY*SCSDTH
Trigger: GTGTGTATCACTACAGGATCAATACCACTGCAGATG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTGTCTCCAGAGGATGTaGCCTGATGCTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHCLQRM*PDAQIR
Trigger: TCTTATCTGAGCATCAGGTCACATCCTCTGGAGACA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGTGTCTCCAGAGGATGTaGCCTGATGCTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPCLQRM*PDAQIR
Trigger: TCTTATCTGAGCATCAGGTCACATCCTCTGGAGACA...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTTGGGCACAGGTTCCGTaGGTGCACTGGACAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFWAQVP*VHWTVG
Trigger: ACCTACTGTCCAGTGCACTCACGGAACCTGTGCCCA...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTCTGCACCACATCACTaGTTTCCTGTACACATGACA +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSSAPHH*FPVHMT
Trigger: TGTCATGTGTACAGGAAATCAGTGATGTGGTGCAGA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCGATGAGGCTGTGGTTTaGCAGTGTATCAATGACAGA +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPDEAVV*QCINDR
Trigger: TCTGTCATTGATACACTGTCAAACCACAGCCTCATC...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGATGACTGAATTCTACTaGGTGCTTGCTTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEMTEFY*VLAWLV
Trigger: CACAAGCCAAGCAAGCACTCAGTAGAATTCAGTCAT...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAACATTGCTGTGTTGCTaGGGTCTGTCCAAAAGAATG +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQETLLCC*GLSKRM
Trigger: CATTCTTTTGGACAGACCTCAGCAACACAGCAATGT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCTTGGCACCCAGCCCTaGCCATTCTTAGAGCGAACT +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLGTQP*PFLERT
Trigger: AGTTCGCTCTAAGAATGGGCAGGGCTGGGTGCCAAG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGGGCAAGACTCTCTGGTaGTGTCCACTTAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEGKTLW*CPLNRK
Trigger: TTTCCTATTAAGTGGACAGCACCAGAGAGTCTTGCC...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTTCTGTGGCATCTTGTaGCCCTTCAATGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSFCGIL*PFNVLL
Trigger: AAGGAGAACATTGAAGGGGCACAAGATGCCACAGAA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAAGCCATCCCAAGTCGTaGCCCACCATTCTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKSHPKS*PTILLF
Trigger: AAAGAGAAGAATGGTGGGGCACGACTTGGGATGGCT...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCACAGATGGACGGATGCTaGAGTAGTCTCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPQMDGC*SSLITG
Trigger: ACCAGTGATGAGACTACTGCAGCATCCGTCCATCTG...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCGGAAGGCAAATTTGTTaGGAGTTTGAGGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPGRQIC*EFEGCS
Trigger: ACTGCATCCCTCAAACTCGCAACAAATTTGCCTTCC...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTTCCCTATTTTCCAGTaGAGTTTCCAACCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPFPIFQ*SFQPCP
Trigger: TGGACAGGGTTGGAAACTGCACTGGAAAATAGGGAA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTTCTGGGTGCAGCTGCTaGAGTCTTGCTGAGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFSGCSC*SLAESS
Trigger: GCTGCTCTCAGCAAGACTGCAGCAGCTGCACCCAGA...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCAGCTGCACACTTACTTaGAACACCCTTGAGAACATG +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPSCTLT*NTLENM
Trigger: CATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTCTCCAAGGGATAGCTaGACACTTACTTGCAACACC +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSPRDS*TLTCNT
Trigger: GGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAAACACCTGCCAGGAATaGCCAGCACCGCGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLNTCQE*PAPRVS
Trigger: GGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTT...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCAGTGTGCTCATTGTGTaGCAGGCACTTGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSSVLIV*QALELS
Trigger: ACTTAGCTCAAGTGCCTGGCACACAATGAGCACACT...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTCCTGAATCCCACCCATaGTTCTCAGTAAGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAPESHP*FSVREE
Trigger: CTCCTCTCTTACTGAGAAGCATGGGTGGGATTCAGG...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGCCTCATTTAGTGCCTaGGGTTCAACATCACAACCA +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCASFSA*GSTSQP
Trigger: TGGTTGTGATGTTGAACCCCAGGCACTAAATGAGGC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACAGTCACAATGTAAAATaGTGGCTCCAAAGTACACAC +
Preference number: 4 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYSHNVK*WLQSTH
Trigger: GTGTGTACTTTGGAGCCACCATTTTACATTGTGACT...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATGTAGGCAAGACTCTCTaGTGCTGTCCACTTAATAGG +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHVGKTL*CCPLNR
Trigger: CCTATTAAGTGGACAGCACCAGAGAGTCTTGCCTAC...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAGTCCACATTCTCTTCTaGCTGAGAAGAGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKVHILF*LRRGGH
Trigger: GTGTCCACCTCTTCTCAGCCAGAAGAGAATGTGGAC...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCAGAGGCACTTGAGGTaGAGGCATCACTGGCCTCCC +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTQRHLR*RHHWPP
Trigger: GGGAGGCCAGTGATGCCTCCACCTCAAGTGCCTCTG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAATTGGCCATTTTGGCTaGCGAGATGGAAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPIGHFG*RDGRCG
Trigger: CCCACATCTTCCATCTCGCCAGCCAAAATGGCCAAT...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCCAGTGTCTACCAGCTaGCTGTTGGGCACAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFPVSTS*LLGTGS
Trigger: GGAACCTGTGCCCAACAGCCAGCTGGTAGACACTGG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAGTATTGAGCTCTCCTTaGGGAGGATGGGGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPVLSSP*GGWGKY
Trigger: ATACTTCCCCCATCCTCCCCAAGGAGAGCTCAATAC...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTACCTGGCGAGATTACTaGAGAATACACTGGCCGAGA +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSATWRDY*RIHWPR
Trigger: TCTCGGCCAGTGTATTCTCCAGTAATCTCGCCAGGT...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTCTGTCACTTAGGCTaGAGTGCAGCGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTLCHLG*SAAARS
Trigger: AGATCGCGCCGCTGCACTCCAGCCTAAGTGACAGAG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAATTCTGCTCCAAATATaGTGTGGTCTGAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQEILLQI*CGLRTV
Trigger: CACTGTCCTCAGACCACACCATATTTGGAGCAGAAT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTAAAATGGAGGAGAGCTaGTTTCTCTGGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFKMEES*FLWPSS
Trigger: AGATGAGGGCCAGAGAAACCAGCTCTCCTCCATTTT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 72 bp CTCCTTACCTGGGAAGAAGTATGGGATCTTCTTATCTaGATCCCACAGGGTGAAGCCTTCCCTAATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LLTWEEVWDLLI*IPQGEAFPNFL
Trigger: CAGGAAATTAGGGAAGGCTTCACCCTGTGGGATCAAGATAAGAAGATCCCATACTTCTTCCCAGGTAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAACACAGCTGGCAAAGTaGTCTGTTAAGTCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPTQLAK*SVKSGR
Trigger: TCTACCCGACTTAACAGATCACTTTGCCAGCTGTGT...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGCAGTCCACATAGCCTaGGCAGTAGTCAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFAVHIA*AVVKQL
Trigger: CAGCTGCTTGACTACTGCTCAGGCTATGTGGACTGC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCTCTGCACCACATCACTaGTTTCCTGTACACATGACA +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCSAPHH*FPVHMT
Trigger: TGTCATGTGTACAGGAAATCAGTGATGTGGTGCAGA...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCAAAATATGTGTGTATTaGGCTCTCCTTGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPKICVY*ALLGED
Trigger: ATCCTCCCCAAGGAGAGCTCAATACACACATATTTT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGGCTGGTTTTTACATCTaGGTTCTCTTCCAACCACTA +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEAGFYI*VLFQPL
Trigger: TAGTGGTTGGAAGAGAACTCAGATGTAAAAACCAGC...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTGTGTGCCAGGCACTTaGGCTAAGTATCTTACAAAT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPCVPGT*AKYLTN
Trigger: ATTTGTAAGATACTTAGCTCAAGTGCCTGGCACACA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTGAGCTACTACTGGCTTaGTACAAGCTAAGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFELLLA*YKLRQR
Trigger: TCTCTGTCTTAGCTTGTATCAAGCCAGTAGTAGCTC...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACTACGGATCCCAGACTaGAGCAGGAATTTACAAAGG +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKLRIPD*SRNLQR
Trigger: CCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGTGCAGAACAGTATCTaGGGTTTACTGTTGATGACA +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSVQNSI*GLLLMT
Trigger: TGTCATCAACAGTAAACCTCAGATACTGTTCTGCAC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTACTTGGCAAACCTTGTaGGAAGACAGAGAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSTWQTL*EDRESS
Trigger: ACTGCTTTCTCTGTCTTCTCACAAGGTTTGCCAAGT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGATACACCTTGCCATCTaGAGTGGTATTGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEIHLAI*SGIDPV
Trigger: TACAGGATCAATACCACTGCAGATGGCAAGGTGTAT...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGGCTCCACTTCCAGCATaGTCTCATAAGTTCATAAAC +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEAPLPA*SHKFIN
Trigger: GTTTATGAACTTATGAGAGCATGCTGGAAGTGGAGC...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAGCCACTTTAGTACCTaGTGTGCCATTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSHFST*CAIGHF
Trigger: AAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCGGAAGGCAAATTTGTTaGGAGTTTGAGGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSGRQIC*EFEGCS
Trigger: ACTGCATCCCTCAAACTCGCAACAAATTTGCCTTCC...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATGTCCACTACTGCCTTaGCCCCACTTAATTTACCTC +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPCPLLP*PHLIYL
Trigger: GAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTAGGGATGGGCTGCATTaGCTTCCTTATGACATACAC +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFRDGLH*LPYDIH
Trigger: GTGTATGTCATAAGGAAGGCAATGCAGCCCATCCCT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAAGGGATGGGCTGCATTaGCTTCCTTATGACATACAC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKRDGLH*LPYDIH
Trigger: GTGTATGTCATAAGGAAGGCAATGCAGCCCATCCCT...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCCCAGCTTTCTTTTCTaGTGTCCCACCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEPSFLF*CPTKFI
Trigger: AATGAATTTGGTGGGACAGCAGAAAAGAAAGCTGGG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGACAGAAGAAAACTCAGTaGTCAATGTTGAATTCCTAT +
Preference number: 4 (lower is better)
Translates to: DVHGDEEVSALGGKGPARQKKTQ*SMLNSY
Trigger: ATAGGAATTCAACATTGAGCACTGAGTTTTCTTCTG...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTTCTCCAAGGGATAGCTaGACACTTACTTGCAACACC +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFSPRDS*TLTCNT
Trigger: GGTGTTGCAAGTAAGTGTGCAGCTATCCCTTGGAGA...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCAGGTGACATACTaGGGGGATCACCCAACACCT +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTLQVTY*GDHPTP
Trigger: AGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTACAATCCCTTAACTTaGATCCCACAACAACAGGGA +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPYNPLT*IPQQQG
Trigger: TCCCTGTTGTTGTGGGATGCAAGTTAAGGGATTGTA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAGGCAGCCCAAAGGCATaGATCCAGATATACAGCATA +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPGSPKA*IQIYSI
Trigger: TATGCTGTATATCTGGATGCATGCCTTTGGGCTGCC...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCAACATTTATAGAGTGTaGTCATTGTGTGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSNIYRV*SLCARH
Trigger: GTGCCTGGCACACAATGAGCACACTCTATAAATGTT...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTGAGAACCCATCAGCATaGTGTAGAGAAGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSENPSA*CREATD
Trigger: ATCTGTTGCTTCTCTACAGCATGCTGATGGGTTCTC...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGACCAGATTCGCCTCTTaGTGGGCAGGAGTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLTRFAS*WAGVKE
Trigger: CTCTTTCACTCCTGCCCAGCAAGAGGCGAATCTGGT...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGGCGACTCACAGATTCTaGTTTTCCCTCCTCCTGTCG +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLATHRF*FSLLLS
Trigger: CGACAGGAGGAGGGAAAAGCAGAATCTGTGAGTCGC...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGCACCAACCACGCCACTaGTGTTCATCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQHQPRH*CSSKER
Trigger: TCTTTCCTTGGATGAACAGCAGTGGCGTGGTTGGTG...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGCACACAGTGCCCGATaGTCCAAACCTCACCCTCTG +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTAHSAR*SKPHPL
Trigger: CAGAGGGTGAGGTTTGGAGCATCGGGCACTGTGTGC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCACAATGTAAAATGGTaGCTCCAAAGTACACACACC +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPHNVKW*LQSTHT
Trigger: GGTGTGTGTACTTTGGAGCCACCATTTTACATTGTG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCTGGAGTCATGGAACATaGTTTCAAAAGCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSWSHGT*FQKLGV
Trigger: CACACCAAGCTTTTGAAACCATGTTCCATGACTCCA...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCTTATTACAGCAGCAATaGCCTTGTGGAAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCLLQQQ*PCGSKA
Trigger: AGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATAA...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAATCACATACAGGCCACTaGGTTTCAAGAAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQESHTGH*VSRKDH
Trigger: ATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGA...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTCCCTATTCTCTACCTaGATTGGGCTTAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHSLFST*IGLKVV
Trigger: TACCACCTTAAGCCCAATCCAGGTAGAGAATAGGGA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGCTAATCCTCTTAACCTaGGCCTCCTTTGGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQLILLT*ASFGAA
Trigger: TGCTGCTCCAAAGGAGGCCCAGGTTAAGAGGATTAG...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTACCTTGGAAAAGGCTTaGAAGTGTCATCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSATLEKA*KCHHWL
Trigger: CAGCCAGTGATGACACTTCCAAGCCTTTTCCAAGGT...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCATTCCCAAAGTGCACTaGTTTTATGGCCATCCACCT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCIPKVH*FYGHPP
Trigger: AGGTGGATGGCCATAAAACCAGTGCACTTTGGGAAT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTAGAAGTAAGTGCACTTaGAGGGAAGGGTCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFRSKCT*REGSGE
Trigger: CTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
3UTR CAA 72 bp TTTCCAGTGCAGTTTCCAACCCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCTCTCCTATACTTATGT +
Preference number: 4 (lower is better)
Translates to: FPVQFPTLSTTA*PPLNLPLLYLC
Trigger: ACATAAGTATAGGAGAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAGGGTTGGAAACTGCACTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAATACCTGGATATGGTaGCATTCCATAGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQENTWIW*HSIGSN
Trigger: ATTGCTACCTATGGAATGTCACCATATCCAGGTATT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGCTCAGATAAGAGCTTaGATTTATTCCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCAQIRA*IYSPES
Trigger: ACTCTCAGGGGAATAAATTCAAGCTCTTATCTGAGC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTGATGAGGCTGTGGTTTaGCAGTGTATCAATGACAGA +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSADEAVV*QCINDR
Trigger: TCTGTCATTGATACACTGTCAAACCACAGCCTCATC...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTTACTTGCAACACCCTTaGGAACATGTACTGTTACCT +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSYLQHP*EHVLLP
Trigger: AGGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTA...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAACCACTAGGAGGAGATaGACCCAATCACTAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTTTRRR*TQSLAA
Trigger: GGCAGCTAGTGATTGGGTTCATCTCCTCCTAGTGGT...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCTGCTCTGGAAGCCCTaGGGACATGGAAGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFLLWKP*GHGRCR
Trigger: TCTACATCTTCCATGTCCTCAGGGCTTCCAGAGCAG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCATCCAAGGAAAGATCTaGGCGATTCCTCTTTTACTT +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSIQGKI*AIPLLL
Trigger: AAGTAAAAGAGGAATCGCTCAGATCTTTCCTTGGAT...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGCGAGTTTTAAAGAATTaGATCCGCATGTTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPRVLKN*IRMFGD
Trigger: GTCCCCAAACATGCGGATTCAATTCTTTAAAACTCG...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCATACACCTTGCCATCTaGAGTGGTATTGATCCTGTA +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCIHLAI*SGIDPV
Trigger: TACAGGATCAATACCACTGCAGATGGCAAGGTGTAT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTATGGTGTACAAGCTCTaGCAAGGTGCTGAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFMVYKL*QGAEAA
Trigger: AGCCGCTTCAGCACCTTGGCAGAGCTTGTACACCAT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACCGCCCCCAAGTTTGTaGTTCATGGTAATATCTGTT +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKPPPSL*FMVISV
Trigger: AACAGATATTACCATGAAGCACAAACTTGGGGGCGG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATCTGTGCCAATGAGCTaGACGTCAGCTGGAGTGTGT +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTSVPMS*TSAGVC
Trigger: ACACACTCCAGCTGACGTGCAGCTCATTGGCACAGA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCCCCAGCTTTCTTTTCTaGTGTCCCACCAAATTCATT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCPSFLF*CPTKFI
Trigger: AATGAATTTGGTGGGACAGCAGAAAAGAAAGCTGGG...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTAGCTGCACACTTACTTaGAACACCCTTGAGAACATG +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFSCTLT*NTLENM
Trigger: CATGTTCTCAAGGGTGTTGCAAGTAAGTGTGCAGCT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAAACCCAATCACTAGCTaGCTGTGCTGCAACTGCAGG +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTNPITS*LCCNCR
Trigger: CCTGCAGTTGCAGCACAGGCAGCTAGTGATTGGGTT...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACATTTATAGAGTGTaGTCATTGTGTGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHNIYRV*SLCARH
Trigger: GTGCCTGGCACACAATGAGCACACTCTATAAATGTT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCACTTTAGCAAACACTTaGTATACCTGCTCATACCTG +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSTLANT*YTCSYL
Trigger: CAGGTATGAGCAGGTATAGCAAGTGTTTGCTAAAGT...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATCTTCAACACGCCAGCTaGTCCCTCAGAGTGAACAGG +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNLQHAS*SLRVNR
Trigger: CCTGTTCACTCTGAGGGAGCAGCTGGCGTGTTGAAG...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCAGCAAATTCCCGTATaGCATGTATTCAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPQQIPV*HVFSHN
Trigger: ATTGTGACTGAATACATGCCATACGGGAATTTGCTG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTAAGCAGAATTTTCTGTaGCATCTTGTGCCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSKQNFL*HLVPLQ
Trigger: TTGAAGGGGCACAAGATGCCACAGAAAATTCTGCTT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTTACCTGCTGTGCCATTaGCCATTTTGGCTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFYLLCH*PFWLAR
Trigger: TCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTA...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATGACGTCAGATTTAATTaGGAAGGTATTGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHDVRFN*EGIVGK
Trigger: CTTGCCTACAATACCTTCTCAATTAAATCTGACGTC...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGACGTCAGATTTAATTaGGAAGGTATTGTAGGCAAG +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCDVRFN*EGIVGK
Trigger: CTTGCCTACAATACCTTCTCAATTAAATCTGACGTC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAATACCTGGATATGGTaGCATTCCATAGGTAGCAAT +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHNTWIW*HSIGSN
Trigger: ATTGCTACCTATGGAATGTCACCATATCCAGGTATT...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATATTTCTTATGGGGCTaGTTCTCCATTTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPYFLWG*FSISRK
Trigger: CTTCCGAGAAATGGAGAATCAGCCCCATAAGAAATA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGCTCTGGAAGCCCCGTaGGTTCGTATTTCTTATGGG +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTALEAP*VRISYG
Trigger: CCCATAAGAAATACGAACTCACGGGGCTTCCAGAGC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTACATTCTCTTCTGGCTaGGAAGAGGTGGACACTGTC +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFTFSSG*EEVDTV
Trigger: GACAGTGTCCACCTCTTCTCAGCCAGAAGAGAATGT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTAAAATATGTGTGTATTaGGCTCTCCTTGGGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFKICVY*ALLGED
Trigger: ATCCTCCCCAAGGAGAGCTCAATACACACATATTTT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACTCAGTGCTCAATGTTaGATTCCTATCTTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKLSAQC*IPIFLS
Trigger: GCTTAGGAAGATAGGAATTCAACATTGAGCACTGAG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCTTGACAGTGTATCAATaGCAGAGCCAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCLTVYQ*QSQKKT
Trigger: AGTTTTCTTCTGGCTCTGTCATTGATACACTGTCAA...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGTCAGCTTTGAATCATaGCCTGCCACAGGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLVSFES*PATGLL
Trigger: AAGGAGGCCTGTGGCAGGTCATGATTCAAAGCTGAC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGAGATGTACATGGGGATaGAGAAGTAAGTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQRCTWG*RSKCTW
Trigger: CCAAGTGCACTTACTTCTTCATCCCCATGTACATCT...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCATGGTGTACAAGCTCTaGCAAGGTGCTGAAGCGGCT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTMVYKL*QGAEAA
Trigger: AGCCGCTTCAGCACCTTGGCAGAGCTTGTACACCAT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCGATTTCCTTCATTACTaGAGCTTCTTTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: YYSSNGLVEARLTATSNSDFLHY*SFFQEF
Trigger: GAATTCCTGAAAGAAGCTGCAGTAATGAAGGAAATC...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGGTGACTTGTCTCTTTaGTTTCGAGGCAGTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTGDLSL*FRGSAG
Trigger: CCCAGCACTGCCTCGAAAGCAAAGAGACAAGTCACC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGAGCAGATGGACGGATaGTGCAGTAGTCTCATCACT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFEQMDG*CSSLIT
Trigger: AGTGATGAGACTACTGCAGCATCCGTCCATCTGCTC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTGTCCACTACTGCCTTaGCCCCACTTAATTTACCTC +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLCPLLP*PHLIYL
Trigger: GAGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCCAGGGTCTACCTGGTaGTCCCTGAAAATGACTACT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFPGSTW*SLKMTT
Trigger: AGTAGTCATTTTCAGGGAGCACCAGGTAGACCCTGG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAATCCATTTATATATCGTaGACCCACTGTAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKSIYIS*THCRQD
Trigger: GTCTTGCCTACAGTGGGTGCACGATATATAAATGGA...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTTAGCAAAGTCAGCATaGTTTATTACCTGGGACATA +
Preference number: 4 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPLAKSA*FITWDI
Trigger: TATGTCCCAGGTAATAAAGCATGCTGACTTTGCTAA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTAGTCACAATGTAAAATaGTGGCTCCAAAGTACACAC +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSSHNVK*WLQSTH
Trigger: GTGTGTACTTTGGAGCCACCATTTTACATTGTGACT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGGCTGCAAGATCTCTATaGATGAAATTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEAARSL*MKFFFS
Trigger: AGAGAAGAAGAATTTCATCCATAGAGATCTTGCAGC...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTTTCCAGCTGGAGTTTaGACCTCTGGCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTFPAGV*TSGSSW
Trigger: CCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTACTGTCCTTTCCAGCTaGAGTTTGGACCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTTVLSS*SLDLWQ
Trigger: CTGCCAGAGGTCCAAACTCCAGCTGGAAAGGACAGT...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAACTGTCCTTTCCAGCTaGAGTTTGGACCTCTGGCAG +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLTVLSS*SLDLWQ
Trigger: CTGCCAGAGGTCCAAACTCCAGCTGGAAAGGACAGT...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTGGCAGGAAAGAAGGTaGGAGAAGGACCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTWQERR*EKDRWF
Trigger: AAACCAGCGGTCCTTCTCCCACCTTCTTTCCTGCCA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTCCCATAGCACTTGGGTaGCACCAGATTCGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSPIALG*HQIRLL
Trigger: CAAGAGGCGAATCTGGTGCCACCCAAGTGCTATGGG...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCAGAGCTTCTGTGTTCTaGAGTGAGTACACATTCTTA +
Preference number: 4 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCRASVF*SEYTFL
Trigger: TAAGAATGTGTACTCACTCCAGAACACAGAAGCTCT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGAAAAGTGCAGGGTCTaGGAGGAGATGGAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNEKCRV*EEMEVL
Trigger: CAGAACCTCCATCTCCTCCCAGACCCTGCACTTTTC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGTGTTTCAGAGTGGGTaGGATAAGGACTGGCACTTT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFVFQSG*DKDWHF
Trigger: AAAGTGCCAGTCCTTATCTCACCCACTCTGAAACAC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTACCAGAGGATGTGACCTaGTGCTCAGATAAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLPEDVT*CSDKSL
Trigger: CAAGCTCTTATCTGAGCATCAGGTCACATCCTCTGG...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAGCAGGGCCTCTTTGCTaGTTTTGTCTGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTAGPLC*FCLLRF
Trigger: AAATCTCAGCAGACAAAATCAGCAAAGAGGCCCTGC...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAGATCCTGGTCCATTATaGAATAATATACCAGACTGG +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPDPGPL*NNIPDW
Trigger: CCAGTCTGGTATATTATTTCATAATGGACCAGGATC...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTCATCTAGAAAAACACTaGATGAATTTCTTAGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSHLEKH*MNFLGP
Trigger: TGGCCCTAAGAAATTCATTCAGTGTTTTTCTAGATG...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCAAGGGTCCATCCACATTaGATCAACTGTCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPRVHPH*INCLIF
Trigger: AAAGATAAGACAGTTGATTCAATGTGGATGGACCCT...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTTCTGTGTTCTGGAGTaGGTACACATTCTTACTTTT +
Preference number: 4 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHFCVLE*VHILTF
Trigger: AAAAGTAAGAATGTGTACTCACTCCAGAACACAGAA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTCAGAATAGACACAGATaGCATGTATCACAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFQNRHR*HVSQFC
Trigger: GCAGAATTGTGATACATGTCATCTGTGTCTATTCTG...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCATTCTGAGGCCTCAGTaGACAGGCAGCAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTILRPQ*TGSKVK
Trigger: CTTCACTTTGCTGCCTGTGCACTGAGGCCTCAGAAT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344730.7
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAAGCTTCTGGACTACTaGCTCCAGTCTTGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTKLLDY*LQSCLP
Trigger: AGGGAGACAAGACTGGAGGCAGTAGTCCAGAAGCTT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCCGCCCCCAAGTTTGTaGTTCATGGTAATATCTGTT +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLPPPSL*FMVISV
Trigger: AACAGATATTACCATGAAGCACAAACTTGGGGGCGG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGTAGAGCAGCACAACTaGAGTCACCTCTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLVEQHN*SHLFSV
Trigger: AACCGAGAAGAGGTGACTGCAGTTGTGCTGCTCTAC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCATCTTCCAAGAGGCTaGTGGGTGACTTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFHLPRG*WVTCLF
Trigger: AAAGAGACAAGTCACCCAGCAGCCTCTTGGAAGATG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCAGATGGACGGATGCTaGAGTAGTCTCATCACTGGT +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTQMDGC*SSLITG
Trigger: ACCAGTGATGAGACTACTGCAGCATCCGTCCATCTG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCAGGTAGGGATGGGCTaGATTGCCTTCCTTATGACA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTQVGMG*IAFLMT
Trigger: TGTCATAAGGAAGGCAATGCAGCCCATCCCTACCTG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTTGTTGGGCAAGAAAACCAGGGAGCCTAAATACACTCAGTAGTGTTTCTCCATGTAGCACTCTGATTTaGAGTTCTTATTACAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCWARKPGSLNTLSSVSPCSTLI*SSYYSS
Trigger: GCTGCTGTAATAAGAACTGCAAATCAGAGTGCTACA...TGGAGAAACACTACTGAGTGTATTTAGGCTCCCTGGTTTTCTTGCCCAACAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTACATGTGGACGGGGTATaGTCCAATAGTCAATGCCAC +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLHVDGV*SNSQCH
Trigger: GTGGCATTGACTATTGGAGCATACCCCGTCCACATG...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTTTAGCAAAGTCAGCATaGTTTATTACCTGGGACATA +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFLAKSA*FITWDI
Trigger: TATGTCCCAGGTAATAAAGCATGCTGACTTTGCTAA...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGTGGAGTCATGGAACATaGTTTCAAAAGCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQWSHGT*FQKLGV
Trigger: CACACCAAGCTTTTGAAACCATGTTCCATGACTCCA...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGTCCACATTCTCTTCTaGCTGAGAAGAGGTGGACAC +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLVHILF*LRRGGH
Trigger: GTGTCCACCTCTTCTCAGCCAGAAGAGAATGTGGAC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGTATTGAGCTCTCCTTaGGGAGGATGGGGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTVLSSP*GGWGKY
Trigger: ATACTTCCCCCATCCTCCCCAAGGAGAGCTCAATAC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGGGTTTGTGTTTAAGCTaGTCCTTTTCAAGTAGAAAA +
Preference number: 4 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEGLCLS*SFSSRK
Trigger: TTTTCTACTTGAAAAGGACCAGCTTAAACACAAACC...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTGGCAGCAGGTATGGTaGAAAGACCCCACAACCATA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTWQQVW*KDPTTI
Trigger: TATGGTTGTGGGGTCTTTCCACCATACCTGCTGCCA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCCATATAGTGGATAAATaGAGAAGAGTAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSHIVDK*RRVRGP
Trigger: AGGTCCTCTTACTCTTCTCCATTTATCCACTATATG...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAGCCTCGGGAGTAGCTaGGATTACAGGCATGTACTA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTSLGSS*DYRHVL
Trigger: TAGTACATGCCTGTAATCCCAGCTACTCCCGAGGCT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAGGAAACCACTTCAAGTaGCGGATTCTCACAGATGGA +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTGNHFK*RILTDG
Trigger: TCCATCTGTGAGAATCCGCCACTTGAAGTGGTTTCC...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTATTTCTTATGGGGCTaGTTCTCCATTTCTCGGAAG +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLYFLWG*FSISRK
Trigger: CTTCCGAGAAATGGAGAATCAGCCCCATAAGAAATA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGCAGGGCCTCTTTGCTaGTTTTGTCTGCTGAGATTT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTAGPLC*FCLLRF
Trigger: AAATCTCAGCAGACAAAATCAGCAAAGAGGCCCTGC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGTGTGTGCCAGGCACTTaGGCTAAGTATCTTACAAAT +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLCVPGT*AKYLTN
Trigger: ATTTGTAAGATACTTAGCTCAAGTGCCTGGCACACA...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTTTGGATCTAGGATATTaGGTCAGAAATGAAGGTATC +
Preference number: 4 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSALDLGY*VRNEGI
Trigger: GATACCTTCATTTCTGACTCAATATCCTAGATCCAA...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTGATTTCCTTCATTACTaGAGCTTCTTTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFDFLHY*SFFQEF
Trigger: GAATTCCTGAAAGAAGCTGCAGTAATGAAGGAAATC...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTAGCCACTTTAGTACCTaGTGTGCCATTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFSHFST*CAIGHF
Trigger: AAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTGAAACCTGTAGCTCCTaGAGGCTGAGTTCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSETCSS*RLSSSL
Trigger: CAAACTGGAACTCAGCCTGCAGGAGCTACAGGTTTC...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAAACAGTGGCTACCTCTaGACCACATCACTGATTTCC +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLNSGYL*TTSLIS
Trigger: GGAAATCAGTGATGTGGTGCAGAGGTAGCCACTGTT...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTCAGAAGAAAACTCAGTaGTCAATGTTGAATTCCTAT +
Preference number: 4 (lower is better)
Translates to: CGGDSLQIHREENASPYSQKKTQ*SMLNSY
Trigger: ATAGGAATTCAACATTGAGCACTGAGTTTTCTTCTG...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGGCAGCCCAAAGGCATaGATCCAGATATACAGCATA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTGSPKA*IQIYSI
Trigger: TATGCTGTATATCTGGATGCATGCCTTTGGGCTGCC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAGTGTGCTCATTGTGTaGCAGGCACTTGAGCTAAGT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTSVLIV*QALELS
Trigger: ACTTAGCTCAAGTGCCTGGCACACAATGAGCACACT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR GCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAAGGGCTTTGCTACTCTaGTCAGGTCAAAAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTRALLL*SGQKVR
Trigger: TCTTACCTTTTGACCTGAGCAGAGTAGCAAAGCCCT...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTATTCTTCTACCTCCATaGTATCTTCCTTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: GLVEARLTATSNSPEQKFILLPP*YLPSMF
Trigger: AAACATTGAAGGAAGATACCATGGAGGTAGAAGAAT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACAGAAGAAATCTGAGTaGCCATGTAGAGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTQKKSE*PCRAAQ
Trigger: TTGTGCTGCTCTACATGGCCACTCAGATTTCTTCTG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATCCCTATTCTCTACCTaGATTGGGCTTAAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTSLFST*IGLKVV
Trigger: TACCACCTTAAGCCCAATCCAGGTAGAGAATAGGGA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAATGAGAAGTTACCCGTaGGTTCGTATTTCTTATGGG +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTMRSYP*VRISYG
Trigger: CCCATAAGAAATACGAACTCACGGGTAACTTCTCAT...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGGAAGATGTAGAGTTTaGCCTTGGAAAAGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNGRCRV*PWKRLG
Trigger: TCCAAGCCTTTTCCAAGGTCAAACTCTACATCTTCC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTTGGTCCCTAGTTTCCTaGAGTAATTCAGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTWSLVS*SNSALN
Trigger: GTTCAGAGCTGAATTACTTCAGGAAACTAGGGACCA...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGGAACTACAGTTGTGCTaGACAGAGCAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLELQLC*TEQVTI
Trigger: TATTGTTACTTGCTCTGTTCAGCACAACTGTAGTTC...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTACCCTGAAAATTTGCTaGTGCGAGTACAGTGATGAA +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFTLKIC*CEYSDE
Trigger: TTCATCACTGTACTCGCATCAGCAAATTTTCAGGGT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGGCAAGACTCTCTGGTaGTGTCCACTTAATAGGAAA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTGKTLW*CPLNRK
Trigger: TTTCCTATTAAGTGGACAGCACCAGAGAGTCTTGCC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCAGAAGAAATCTGAGTaGCCATGTAGAGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTQKKSE*PCRAAQ
Trigger: TTGTGCTGCTCTACATGGCCACTCAGATTTCTTCTG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTTATTACAGCAGCAATaGCCTTGTGGAAGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTLLQQQ*PCGSKA
Trigger: AGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATAA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATTGGGAGAAGGACCGCTaGTTTTTACATCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNWEKDR*FLHLSS
Trigger: AGAACTCAGATGTAAAAACCAGCGGTCCTTCTCCCA...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTACATCAGTAGCAAAATaGAAGGGAGCAGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSTSVAK*KGAEGV
Trigger: GACCCCTTCTGCTCCCTTCCATTTTGCTACTGATGT...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGCTCAGATAAGAGCTTaGATTTATTCCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTAQIRA*IYSPES
Trigger: ACTCTCAGGGGAATAAATTCAAGCTCTTATCTGAGC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGCATTGCCTTCCTTATaGCATACACATGTTCCCTAT +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLALPSL*HTHVPY
Trigger: ATAGGGAACATGTGTATGTCATAAGGAAGGCAATGC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCACTGGTTAATGCTCTaGATGCTACCAGGAATAAAG +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTHWLML*MLPGIK
Trigger: CTTTATTCCTGGTAGCATTCAGAGCATTAACCAGTG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGCTGGTTTTTACATCTaGGTTCTCTTCCAACCACTA +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNAGFYI*VLFQPL
Trigger: TAGTGGTTGGAAGAGAACTCAGATGTAAAAACCAGC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGCTTGTATAGTAAGTTaGCAGTGCCTCTTTAACCTG +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNACIVS*QCLFNL
Trigger: CAGGTTAAAGAGGCACTGTCAACTTACTATACAAGC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTACAGTGAAGTTCAAGTaGACTACAGTTGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTTVKFK*TTVVLN
Trigger: GTTCAGCACAACTGTAGTTCACTTGAACTTCACTGT...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTTCCATTTATATATCGTaGACCCACTGTAGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTSIYIS*THCRQD
Trigger: GTCTTGCCTACAGTGGGTGCACGATATATAAATGGA...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTGAAATGCTGGAGTCATaGAACATGGTTTCAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFEMLES*NMVSKA
Trigger: AGCTTTTGAAACCATGTTCCATGACTCCAGCATTTC...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAGACCCCTGTACTTATaGTTTACAGATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTRPLYL*FTDSHQ
Trigger: TTGGTGGCTATCTGTAAACCATAAGTACAGGGGTCT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAAGACCCCTGTACTTATaGTTTACAGATAGCCACCAA +
Preference number: 4 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLRPLYL*FTDSHQ
Trigger: TTGGTGGCTATCTGTAAACCATAAGTACAGGGGTCT...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATGGTGTTTCAAACACCTaGCGAGATTACTGGAGAATA +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNGVSNT*RDYWRI
Trigger: TATTCTCCAGTAATCTCGCCAGGTGTTTGAAACACC...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGAACCCCAAATCCAGGTaGAACAATTTAATGCAAGAT +
Preference number: 4 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLNPKSR*NNLMQD
Trigger: ATCTTGCATTAAATTGTTCCACCTGGATTTGGGGTT...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTACAACACTGGTAATGTaGCACACAATTGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFTTLVM*HTIDVF
Trigger: AAACACATCAATTGTGTGTCACATTACCAGTGTTGT...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCCAGCAAATTCCCGTATaGCATGTATTCAGTCACAAT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTQQIPV*HVFSHN
Trigger: ATTGTGACTGAATACATGCCATACGGGAATTTGCTG...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAGCTGCAAGATCTCTATaGATGAAATTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTAARSL*MKFFFS
Trigger: AGAGAAGAAGAATTTCATCCATAGAGATCTTGCAGC...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATACCTGGGAAGAAGTATaGGATCTTCTTATCTTGATC +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNTWEEV*DLLILI
Trigger: GATCAAGATAAGAAGATCCCATACTTCTTCCCAGGT...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGAAGTAATTCAGCTCTaGACTACAACTTTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTEVIQL*TTTLAN
Trigger: GTTTGCTAAAGTTGTAGTTCAGAGCTGAATTACTTC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp AAGTTTAACACTGTTAGCAGTTCACAGTCAGACAACAGACGGAGAGAATTAAATAATTTACAAAGGAAGTaGGCTACTACTGGCTTGATA +
Preference number: 4 (lower is better)
Translates to: KFNTVSSSQSDNRRRELNNLQRK*ATTGLI
Trigger: TATCAAGCCAGTAGTAGCTCACTTCCTTTGTAAATT...ATTTAATTCTCTCCGTCTGTTGTCTGACTGTGAACTGCTAACAGTGTTAAACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CCA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAATACTGATTGACAATTaGCCTAATCATGGTGATTTC +
Preference number: 4 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTILIDN*PNHGDF
Trigger: GAAATCACCATGATTAGGCCAATTGTCAATCAGTAT...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR TCA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTCTAGTTTCTGAATACTaGTTGACAATTGGCCTAATC +
Preference number: 4 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSLVSEY*LTIGLI
Trigger: GATTAGGCCAATTGTCAATCAGTATTCAGAAACTAG...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR GCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTGTACCAGATTAGGATaGTTGATTTCCTTCATTACT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTCTRLG*LISFIT
Trigger: AGTAATGAAGGAAATCAAGCATCCTAATCTGGTACA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CCA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCATTCTTCTACCTCCATaGTATCTTCCTTCAATGTTT +
Preference number: 4 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTILLPP*YLPSMF
Trigger: AAACATTGAAGGAAGATACCATGGAGGTAGAAGAAT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
3UTR CAA 72 bp GGAAAACCAGAACTCTATCCAAATGATATAGATATCTaGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GKPELYPNDIDI*TVKSWRRFRSS
Trigger: AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGGATAGAGTTCTGGTTTTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS CCA 90 bp GCCGACCCCTGGTCACATTCCTCCTCGGCTCCGGCCTCGGGCTCCTaGCGCTGCTCCGGTCTCTCCCTCCCAGCCCAGGCCCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: ADPWSHSSSAPASGS*RCSGLSLPAQALAL
Trigger: CAGGGCCAGGGCCTGGGCTGGGAGGGAGAGACCGGAGCAGCGCCAGGAGCCCGAGGCCGGAGCCGAGGAGGAATGTGACCAGGGGTCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392043.4
ENST00000502732.6
ENST00000668691.1
CDS GCA 90 bp TCCTCACGGCAGCCGCCGCGCTGCCTCCAGGCGACTCACAGATTCTaGTTTTCCCTCCTCCTGTCGCGGCTCCGCGCCCCCAACGCCGCC +
Preference number: 5 (lower is better)
Translates to: SSRQPPRCLQATHRF*FSLLLSRLRAPNAA
Trigger: GGCGGCGTTGGGGGCGCGGAGCCGCGACAGGAGGAGGGAAAAGCAGAATCTGTGAGTCGCCTGGAGGCAGCGCGGCGGCTGCCGTGAGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392043.4
ENST00000502732.6
ENST00000668691.1
CDS GCA 90 bp GCCCGGCTGCTCTCCATCCTCTGGAACTCCAGCCATCCCAAGTCGTaGCCCACCATTCTTCTCTTTACCCTTGGGGGCAGCTGCCACTCC +
Preference number: 5 (lower is better)
Translates to: ARLLSILWNSSHPKS*PTILLFTLGGSCHS
Trigger: GGAGTGGCAGCTGCCCCCAAGGGTAAAGAGAAGAATGGTGGGGCACGACTTGGGATGGCTGGAGTTCCAGAGGATGGAGAGCAGCCGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CCA 90 bp CGAGATGGAAGATGTGGGCAGAGGCACTTGAGGTGGAGGCATCACTaGCCTCCCAGCTTTCCCACTGATGGGCACTGCGCCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RDGRCGQRHLRWRHH*PPSFPTDGHCAQSC
Trigger: GCAGCTCTGGGCGCAGTGCCCATCAGTGGGAAAGCTGGGAGGCCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCACATCTTCCATCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS-3UTR CAA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCGTCGGGGTCGGTCCTaGTCTCCAGAGGATGTGACC +
Preference number: 5 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIRRGRS*SPEDVT
Trigger: GGTCACATCCTCTGGAGACAAGGACCGACCCCGACG...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS CCA 90 bp GGCAGCCTTGGCTGGAGAAGGCCAGCCCGGCTGCTCTCCATCCTCTaGAACTCCAGCCATCCCAAGTCGTGCCCCACCATTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GSLGWRRPARLLSIL*NSSHPKSCPTILLF
Trigger: AAAGAGAAGAATGGTGGGGCACGACTTGGGATGGCTGGAGTTCCAGAGGATGGAGAGCAGCCGGGCTGGCCTTCTCCAGCCAAGGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS-3UTR CAA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGTACCTGCTGTGCCATaGGCCATTTTGGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPVPAVP*AILAGE
Trigger: CTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTAC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTAGTGATCCGCCCATCTaGGTCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPSDPPI*VSQSAG
Trigger: CCCAGCACTTTGGGAGACCAAGATGGGCGGATCACT...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS TCA 90 bp GCTGGTGTCCAGTGTCTACCAGCTGGCTGTTGGGCACAGGTTCCGTaGGTGCACTGGACAGTAGGTCAGCACATTCCAGCAGGGCCTCTT +
Preference number: 5 (lower is better)
Translates to: AGVQCLPAGCWAQVP*VHWTVGQHIPAGPL
Trigger: AAGAGGCCCTGCTGGAATGTGCTGACCTACTGTCCAGTGCACTCACGGAACCTGTGCCCAACAGCCAGCTGGTAGACACTGGACACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 90 bp AGGGCAGTTGGCTCTTCTGTAGGGTCTGAGCAGATGGACGGATGCTaGAGTAGTCTCATCACTGGTGGTGGGGGTGGGGCACACTTTGGT +
Preference number: 5 (lower is better)
Translates to: RAVGSSVGSEQMDGC*SSLITGGGGGAHFG
Trigger: ACCAAAGTGTGCCCCACCCCCACCACCAGTGATGAGACTACTGCAGCATCCGTCCATCTGCTCAGACCCTACAGAAGAGCCAACTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CCA 90 bp TACCTGCTGTGCCATTGGCCATTTTGGCTGGCGAGATGGAAGATGTaGGCAGAGGCACTTGAGGTGGAGGCATCACTGGCCTCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: YLLCHWPFWLARWKM*AEALEVEASLASQL
Trigger: AAGCTGGGAGGCCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS-3UTR CAA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGCAATAACTTGGCTTTaGGTCTCTCCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPAITWL*VSPCLE
Trigger: CTCCAAGCAGGGAGAGACCAAAAGCCAAGTTATTGC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS CCA 90 bp TGGACACTGTCCTTTCCAGCTGGAGTTTGGACCTCTGGCAGTTCCTaGGAAGGGTCATTGCCATCCTATCCTGCTCTGGAAGCCCTGAGG +
Preference number: 5 (lower is better)
Translates to: WTLSFPAGVWTSGSS*EGSLPSYPALEALR
Trigger: CCTCAGGGCTTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAGGACAGTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS-3UTR CAA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCACCAGGAAGCTGCCATaGATTAGACTGCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: GDHPTPARNAQHRVSPLITRKLP*IRLLSR
Trigger: TCTGCTCAGCAGTCTAATCAATGGCAGCTTCCTGGT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS TCA 90 bp CATCAGCCACTGTGGAGTGATGGTGTACAAGCTCTGCCAAGGTGCTaGAGCGGCTCTCAGCAGTCACATACACCTTGCCATCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: HQPLWSDGVQALPRC*SGSQQSHTPCHLQW
Trigger: CCACTGCAGATGGCAAGGTGTATGTGACTGCTGAGAGCCGCTTCAGCACCTTGGCAGAGCTTGTACACCATCACTCCACAGTGGCTGATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000668691.1
CDS-3UTR CAA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCTTCAGTGTCCGAGTCTaGGAAGGAAGTATAGGTAGC +
Preference number: 5 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIFSVRV*EGSIGS
Trigger: GCTACCTATACTTCCTTCCAAGACTCGGACACTGAA...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS CCA 90 bp CTTCTGGCTGAGAAGAGGTGGACACTGTCCTTTCCAGCTGGAGTTTaGACCTCTGGCAGTTCCTGGGAAGGGTCATTGCCATCCTATCCT +
Preference number: 5 (lower is better)
Translates to: LLAEKRWTLSFPAGV*TSGSSWEGSLPSYP
Trigger: AGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAGGACAGTGTCCACCTCTTCTCAGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CCA 90 bp TCTCAGAGCCACTTTAGTACCTGCTGTGCCATTGGCCATTTTGGCTaGCGAGATGGAAGATGTGGGCAGAGGCACTTGAGGTGGAGGCAT +
Preference number: 5 (lower is better)
Translates to: SQSHFSTCCAIGHFG*RDGRCGQRHLRWRH
Trigger: ATGCCTCCACCTCAAGTGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCTCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS-3UTR CAA 90 bp GGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCATTTTCTGTGGCATCTaGTGCCCCTTCAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: GDHPTPARNAQHRVSPLIIFCGI*CPFNVL
Trigger: GAGAACATTGAAGGGGCACAAGATGCCACAGAAAAT...GATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGATCCTGGGAAGGGTCATaGCCATCCTATCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: DVHGDEEVSALGGKGPARSWEGS*PSYPAL
Trigger: CAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGA...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTGGTCTCTCCCTGCTaGGAGCAGCACTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: APHTHLRGGTFGINVQRVLVSPC*EQHFPL
Trigger: CAGAGGAAAGTGCTGCTCCAAGCAGGGAGAGACCAA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GTGCTGCAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATTTCTCAGCGGCCTGTTaGGTTTTTCTCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: VLQLQVTYCGDHPTPARNFSAAC*VFLRAT
Trigger: AGTGGCTCTGAGAAAAACCAAACAGGCCGCTGAGAA...ATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTGCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS TCA 90 bp CCTGGTGAAGCATGTCTCTTTGGCATCTTCCAAGAGGCTGCTGGGTaGCTTGTCTCTTTGCTTTCGAGGCAGTGCTGGGGATCCACTAGA +
Preference number: 5 (lower is better)
Translates to: PGEACLFGIFQEAAG*LVSLLSRQCWGSTR
Trigger: TCTAGTGGATCCCCAGCACTGCCTCGAAAGCAAAGAGACAAGTCACCCAGCAGCCTCTTGGAAGATGCCAAAGAGACATGCTTCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 90 bp TTCCAGCTGGAGTTTGGACCTCTGGCAGTTCCTGGGAAGGGTCATTaGCATCCTATCCTGCTCTGGAAGCCCCGTGAGTTCGTATTTCTT +
Preference number: 5 (lower is better)
Translates to: FQLEFGPLAVPGKGH*HPILLWKPREFVFL
Trigger: AAGAAATACGAACTCACGGGGCTTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344730.7
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
CDS-3UTR CAA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCAATTCTACTGAGTGCTaGCTTGGCTTGTGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGNSTEC*LGLCSH
Trigger: ATGGGAACACAAGCCAAGCAAGCACTCAGTAGAATT...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS TCA 90 bp CATAGCACTTGGGTGGCACCAGATTCGCCTCTTGCTGGGCAGGAGTaGAAGAGAACCCATCAGCATGCTGTAGAGAAGCAACAGATGAGA +
Preference number: 5 (lower is better)
Translates to: HSTWVAPDSPLAGQE*KRTHQHAVEKQQMR
Trigger: TCTCATCTGTTGCTTCTCTACAGCATGCTGATGGGTTCTCTTTCACTCCTGCCCAGCAAGAGGCGAATCTGGTGCCACCCAAGTGCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS-3UTR CAA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTGTGGGCAGAGGCACTaGAGGTGGAGGCATCACTGG +
Preference number: 5 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHCGQRH*RWRHHW
Trigger: CCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCACA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTGCAGTTCTCTCTGCTTaGGATTCAAACCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: YCGDHPTPARNAQHRVSPAVLSA*DSNLLI
Trigger: AATTAAAAGGTTTGAATCCAAAGCAGAGAGAACTGC...AGGAGACACGCGGTGCTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp ACCTGCCAGGAATGCCCAGCACCGCGTGTCTCCTCTAATCCTCTTAACCTGGGCCTTGGACAAGGGCCTTaGCTCATTGCTTTTAGAATA +
Preference number: 5 (lower is better)
Translates to: TCQECPAPRVSSNPLNLGLGQGP*LIAFRI
Trigger: TATTCTAAAAGCAATGAGCAAAGGCCCTTGTCCAAG...GCCCAGGTTAAGAGGATTAGAGGAGACACGCGGTGCTGGGCATTCCTGGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS GCA 90 bp TTTCTCAGCGGCCTGTTTGGTTTTTCTCAGAGCCACTTTAGTACCTaGTGTGCCATTGGCCATTTTGGCTGGCGAGATGGAAGATGTGGG +
Preference number: 5 (lower is better)
Translates to: FLSGLFGFSQSHFST*CAIGHFGWRDGRCG
Trigger: CCCACATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCTCTGAGAAAAACCAAACAGGCCGCTGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS-3UTR CAA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCCGAGCAAGTTCTCCTaGGAGCTCCACCTGATAGCC +
Preference number: 5 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHPSKFS*ELHLIA
Trigger: GGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGTCCTGGGAAGGGTCATaGCCATCCTATCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: LFSTWIGLKVVREGKGTESWEGS*PSYPAL
Trigger: CAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGA...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCTTTCCAGCTGGAGTTaGGACCTCTGGCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LFSTWIGLKVVREGKGTELSSWS*DLWQFL
Trigger: CAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTTGGAAGCATGTCATaGGCCCTGTCCACATTCTCT +
Preference number: 5 (lower is better)
Translates to: APHTHLRGGTFGINVQRVFGSMS*ALSTFS
Trigger: AGAGAATGTGGACAGGGCCAATGACATGCTTCCAAA...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTTCTACCAGCTGGCTGTaGGGCACAGGTTCCGTGAGT +
Preference number: 5 (lower is better)
Translates to: GLVEARLTATSNSPEQKFSTSWL*GTGSVS
Trigger: ACTCACGGAACCTGTGCCCAACAGCCAGCTGGTAGA...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCT +
Preference number: 5 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYLSTTA*PPLNLP
Trigger: AGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAG...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGTACATGGGGATGAAGAAGTAAGTGCACTTGGAGGGAAGGGTCCGGCGAGACTACCCTTCAGATTGTaGTTGGGCAAGAAAACCAGG +
Preference number: 5 (lower is better)
Translates to: DVHGDEEVSALGGKGPARLPFRL*LGKKTR
Trigger: CCTGGTTTTCTTGCCCAACAACAATCTGAAGGGTAG...TCTCGCCGGACCCTTCCCTCCAAGTGCACTTACTTCTTCATCCCCATGTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp CAACTGCAGGTGACATACTGCGGGGATCACCCAACACCTGCCAGGAATGCCCAGCCAAGGTTAAATGACTaGCCTTTTAGACTGGCATTA +
Preference number: 5 (lower is better)
Translates to: QLQVTYCGDHPTPARNAQPRLND*PFRLAL
Trigger: TAATGCCAGTCTAAAAGGCAAGTCATTTAACCTTGG...CTGGGCATTCCTGGCAGGTGTTGGGTGATCCCCGCAGTATGTCACCTGCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAGAGTAGGCTGTAGCTaGTCCCACAGCCCTGAATCC +
Preference number: 5 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQERVGCS*SHSPES
Trigger: GGATTCAGGGCTGTGGGACAAGCTACAGCCTACTCT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAATGTCCCCTGGCGTTCTaGCCACTCACAATACCTGGT +
Preference number: 5 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQECPLAF*PLTIPG
Trigger: ACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACA...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS GCA 90 bp GAGTGGCCATGTAGAGCAGCACAACTGCAGTCACCTCTTCTCGGTTaGATTCTCGGAGGTAATCCAGCAAATTCCCGTATGGCATGTATT +
Preference number: 5 (lower is better)
Translates to: EWPCRAAQLQSPLLG*ILGGNPANSRMACI
Trigger: AATACATGCCATACGGGAATTTGCTGGATTACCTCCGAGAATGCAACCGAGAAGAGGTGACTGCAGTTGTGCTGCTCTACATGGCCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000662960.1
ENST00000668691.1
CDS-3UTR CAA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACCGAGCAAGTTCTCCTaGGAGCTCCACCTGATAGCC +
Preference number: 5 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKPSKFS*ELHLIA
Trigger: GGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCAGGCTGCTGGGTGACTaGTCTCTTTGCTTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCRLLGD*SLCFRG
Trigger: GCCTCGAAAGCAAAGAGACAAGTCACCCAGCAGCCT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATTTCTTCTCTTTACCCTaGGGGGCAGCTGCCACTCCA +
Preference number: 5 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHFFSLP*GAAATP
Trigger: TGGAGTGGCAGCTGCCCCCAAGGGTAAAGAGAAGAA...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCGTCGGGGTCGGTCCTaGTCTCCAGAGGATGTGACC +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLRRGRS*SPEDVT
Trigger: GGTCACATCCTCTGGAGACAAGGACCGACCCCGACG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTTCTACCAGCTGGCTGTaGGGCACAGGTTCCGTGAGT +
Preference number: 5 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSASTSWL*GTGSVS
Trigger: ACTCACGGAACCTGTGCCCAACAGCCAGCTGGTAGA...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp ATGAAAGGAATCAAGCAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATCTGGGTAGTGTAATGTaGTCACCAGCCCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: MKGIKQWQPKGMHPDIQHLGSVM*SPAHQP
Trigger: TGGCTGATGGGCTGGTGACAACATTACACTACCCAG...ATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTGCTTGATTCCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTAGGCTGCTGGGTGACTaGTCTCTTTGCTTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFRLLGD*SLCFRG
Trigger: GCCTCGAAAGCAAAGAGACAAGTCACCCAGCAGCCT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TCACATACTCCTACGGATCCCAGACTGAAGCAGGAATTTACAAAGGAAGTGAGCCCTCTGGGCAATAACTaGGCTTTTGGTCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: SHTPTDPRLKQEFTKEVSPLGNN*AFGLSL
Trigger: CAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAGG...GCTCACTTCCTTTGTAAATTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGTGCCATTGGCCATTTaGGCTGGCGAGATGGAAGAT +
Preference number: 5 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCVPLAI*AGEMED
Trigger: ATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCAC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTTCCAGCAGGGCCTCTTaGCTGATTTTGTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CGGDSLQIHREENASPYSSSRAS*LILSAE
Trigger: CTCAGCAGACAAAATCAGCAAAGAGGCCCTGCTGGA...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTAAAAATATGTGTGTATaGAGCTCTCCTTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: APHTHLRGGTFGINVQRVKNMCV*SSPWGG
Trigger: TCCTCCCCAAGGAGAGCTCAATACACACATATTTTT...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCCCTTCAGATTGTTGTaGGGCAAGAAAACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEPFRLL*GKKTRE
Trigger: CTCCCTGGTTTTCTTGCCCAACAACAATCTGAAGGG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCAAAACTGTCAACGCCTaGGACAAGGGCCTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPKTVNA*DKGLCS
Trigger: TGAGCAAAGGCCCTTGTCCAAGGCGTTGACAGTTTT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAGACCTTGGAAAAGGCTaGGAAGTGTCATCACTGGCT +
Preference number: 5 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQEDLGKG*EVSSLA
Trigger: AGCCAGTGATGACACTTCCAAGCCTTTTCCAAGGTC...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAAAGGACCTCATCCTTCTaGAGTCAAGGTCCTTGGAAG +
Preference number: 5 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQERTSSF*SQGPWK
Trigger: CTTCCAAGGACCTTGACTCAAGAAGGATGAGGTCCT...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACCTCGCCAGGTGGGCTaGAGAAACGCAGCAACTGCC +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTPRQVG*RNAATA
Trigger: GGCAGTTGCTGCGTTTCTCAAGCCCACCTGGCGAGG...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS CCA 90 bp AGAACTTCAGAAATGCTGGAGTCATGGAACATGGTTTCAAAAGCTTaGTGTGTTTCAGCAAAAGAGGGCCTATCGGCAGGGCTCCACTTC +
Preference number: 5 (lower is better)
Translates to: RTSEMLESWNMVSKA*CVSAKEGLSAGLHF
Trigger: GAAGTGGAGCCCTGCCGATAGGCCCTCTTTTGCTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTCTGAAGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392043.4
ENST00000668691.1
CDS-3UTR CAA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTACCAGGAAGCTGCCATaGATTAGACTGCTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: CGGDSLQIHREENASPYSTRKLP*IRLLSR
Trigger: TCTGCTCAGCAGTCTAATCAATGGCAGCTTCCTGGT...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGTTCTTCTCTTTACCCTaGGGGGCAGCTGCCACTCCA +
Preference number: 5 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQFFSLP*GAAATP
Trigger: TGGAGTGGCAGCTGCCCCCAAGGGTAAAGAGAAGAA...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATGTGGGCAGAGGCACTaGAGGTGGAGGCATCACTGG +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTCGQRH*RWRHHW
Trigger: CCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCACA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAGTGCCATTGGCCATTTaGGCTGGCGAGATGGAAGAT +
Preference number: 5 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKVPLAI*AGEMED
Trigger: ATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCAC...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACAGCTGCTCAAGTCCTaGGCCAGTATGTCAGTATGC +
Preference number: 5 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKQLLKS*ASMSVC
Trigger: GCATACTGACATACTGGCCAAGGACTTGAGCAGCTG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AGAAGCATCTCTGTCCCCTGGCGTTCTTGCCACTCACAATACCTGGTATGGTACAAGCCCAGTGTCTTTTaGATTAAGCGTGGTGTAAAG +
Preference number: 5 (lower is better)
Translates to: RSISVPWRSCHSQYLVWYKPSVF*IKRGVK
Trigger: CTTTACACCACGCTTAATCAAAAAGACACTGGGCTT...GTACCATACCAGGTATTGTGAGTGGCAAGAACGCCAGGGGACAGAGATGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCGTGCACATTGCTGTGTaGCTGAGGTCTGTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCVHIAV*LRSVQK
Trigger: CTTTTGGACAGACCTCAGCAACACAGCAATGTGCAC...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGACGTTTCAGAAGTTCTCACATACTCCTACGGATCCCAGACTGAAGCAGGAACTTGAGTCAAGGTCCTaGGAAGAGCTTCTGTGTTCT +
Preference number: 5 (lower is better)
Translates to: ETFQKFSHTPTDPRLKQELESRS*EELLCS
Trigger: AGAACACAGAAGCTCTTCCAAGGACCTTGACTCAAG...TTCCTGCTTCAGTCTGGGATCCGTAGGAGTATGTGAGAACTTCTGAAACGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GCACCACATACACACCTGCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTACGAGTTTTAAAGAATaGAATCCGCATGTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: APHTHLRGGTFGINVQRVTSFKE*NPHVWG
Trigger: TCCCCAAACATGCGGATTCAATTCTTTAAAACTCGT...AACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGCAGGTGTGTATGTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS TCA 90 bp ACCCATCAGCATGCTGTAGAGAAGCAACAGATGAGAAGTTACCCGTaGGTTCGTATTTCTTATGGGGCTGATTCTCCATTTCTCGGAAGG +
Preference number: 5 (lower is better)
Translates to: THQHAVEKQQMRSYP*VRISYGADSPFLGR
Trigger: CCTTCCGAGAAATGGAGAATCAGCCCCATAAGAAATACGAACTCACGGGTAACTTCTCATCTGTTGCTTCTCTACAGCATGCTGATGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS-3UTR CAA 90 bp TGTGGGGGTGATTCACTTCAAATCCATAGAGAGGAGAATGCCTCTCCCTATTCTTTCAGTGTCCGAGTCTaGGAAGGAAGTATAGGTAGC +
Preference number: 5 (lower is better)
Translates to: CGGDSLQIHREENASPYSFSVRV*EGSIGS
Trigger: GCTACCTATACTTCCTTCCAAGACTCGGACACTGAA...AGAATAGGGAGAGGCATTCTCCTCTCTATGGATTTGAAGTGAATCACCCCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTGCAATAACTTGGCTTTaGGTCTCTCCCTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAAITWL*VSPCLE
Trigger: CTCCAAGCAGGGAGAGACCAAAAGCCAAGTTATTGC...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCTTACAATCCCTTAACTaGCATCCCACAACAACAGGG +
Preference number: 5 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPLQSLN*HPTTTG
Trigger: CCCTGTTGTTGTGGGATGCAAGTTAAGGGATTGTAA...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTCTACCCTTCAGATTGTaGTTGGGCAAGAAAACCAGG +
Preference number: 5 (lower is better)
Translates to: GLVEARLTATSNSPEQKFLPFRL*LGKKTR
Trigger: CCTGGTTTTCTTGCCCAACAACAATCTGAAGGGTAG...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAAAAAACTGTCAACGCCTaGGACAAGGGCCTTTGCTCA +
Preference number: 5 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKKTVNA*DKGLCS
Trigger: TGAGCAAAGGCCCTTGTCCAAGGCGTTGACAGTTTT...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTTATAGAGTGTGCTCATaGTGTGCCAGGCACTTGAGC +
Preference number: 5 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFYRVCS*CARHLS
Trigger: GCTCAAGTGCCTGGCACACAATGAGCACACTCTATA...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCACCAGATTCGCCTCTaGCTGGGCAGGAGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLHQIRL*LGRSER
Trigger: TCTTTCACTCCTGCCCAGCAAGAGGCGAATCTGGTG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGACATGTATCACAATTCTGCTCCAAATATGGTGTGGTCTGAGGACAGTGCTTGGGATCTTCTTATCTaGATCCCACAGGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: DDMYHNSAPNMVWSEDSAWDLLI*IPQGEA
Trigger: GGCTTCACCCTGTGGGATCAAGATAAGAAGATCCCA...AGCACTGTCCTCAGACCACACCATATTTGGAGCAGAATTGTGATACATGTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATTGGTCTCTCCCTGCTaGGAGCAGCACTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTLVSPC*EQHFPL
Trigger: CAGAGGAAAGTGCTGCTCCAAGCAGGGAGAGACCAA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCGTACCTGCTGTGCCATaGGCCATTTTGGCTGGCGAG +
Preference number: 5 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTVPAVP*AILAGE
Trigger: CTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTAC...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCAGCTGCTCAAGTCCTaGGCCAGTATGTCAGTATGC +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLQLLKS*ASMSVC
Trigger: GCATACTGACATACTGGCCAAGGACTTGAGCAGCTG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGTTACTTGCAACACCCTaGAGAACATGTACTGTTACC +
Preference number: 5 (lower is better)
Translates to: LFSTWIGLKVVREGKGTELLATP*RTCTVT
Trigger: GGTAACAGTACATGTTCTCAAGGGTGTTGCAAGTAA...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGTATAGAGTGTGCTCATaGTGTGCCAGGCACTTGAGC +
Preference number: 5 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQYRVCS*CARHLS
Trigger: GCTCAAGTGCCTGGCACACAATGAGCACACTCTATA...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS TCA 90 bp CATCATCCTGCTCTGTGTCTTTTGGTTCACAATGTTATGCACGTCTaGTTGGCACAATGTAGGAGAACTTCAGAAATGCTGGAGTCATGG +
Preference number: 5 (lower is better)
Translates to: HHPALCLLVHNVMHV*LAQCRRTSEMLESW
Trigger: CCATGACTCCAGCATTTCTGAAGTTCTCCTACATTGTGCCAATCAGACGTGCATAACATTGTGAACCAAAAGACACAGAGCAGGATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS CCA 90 bp CTCTTCTCGGTTGCATTCTCGGAGGTAATCCAGCAAATTCCCGTATaGCATGTATTCAGTCACAATGTAAAATGGTGGCTCCAAAGTACA +
Preference number: 5 (lower is better)
Translates to: LFSVAFSEVIQQIPV*HVFSHNVKWWLQST
Trigger: TGTACTTTGGAGCCACCATTTTACATTGTGACTGAATACATGCCATACGGGAATTTGCTGGATTACCTCCGAGAATGCAACCGAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000662960.1
ENST00000668691.1
CDS-3UTR CAA 90 bp CTGTATCAGAACAGGATTCATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCTGGGTAGTGTAATGTaGTCACCAGCCCATCAGCCA +
Preference number: 5 (lower is better)
Translates to: LYQNRIHSFVRTCRDYYFLGSVM*SPAHQP
Trigger: TGGCTGATGGGCTGGTGACAACATTACACTACCCAG...AAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATGAATCCTGTTCTGATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GCGGGGCGGGACCTTTGGTATAAACGTTCAACGAGTTTTAAAGAATTGAATCCGTCTCTAAGTACTCCATaGCAGAAGAAATCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: AGRDLWYKRSTSFKELNPSLSTP*QKKSEW
Trigger: CCACTCAGATTTCTTCTGCAATGGAGTACTTAGAGA...CGGATTCAATTCTTTAAAACTCGTTGAACGTTTATACCAAAGGTCCCGCCCCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp TCAGTCACATACAGGCCACTGGGTTTCAAGAAAAGACCATCTCCCTGGTATTTTATTTTCTGTGGCATCTaGTGCCCCTTCAATGTTCTC +
Preference number: 5 (lower is better)
Translates to: SVTYRPLGFKKRPSPWYFIFCGI*CPFNVL
Trigger: GAGAACATTGAAGGGGCACAAGATGCCACAGAAAAT...AAAATACCAGGGAGATGGTCTTTTCTTGAAACCCAGTGGCCTGTATGTGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATCCAGCAGGGCCTCTTaGCTGATTTTGTCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTSSRAS*LILSAE
Trigger: CTCAGCAGACAAAATCAGCAAAGAGGCCCTGCTGGA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GATGGGCTGCATTGCCTTCCTTATGACATACACATGTTCCCTATTTTCCAGTGCAAATTTGTTGCGAGTTaGAGGGATGCAGTCCACATA +
Preference number: 5 (lower is better)
Translates to: DGLHCLPYDIHMFPIFQCKFVAS*RDAVHI
Trigger: TATGTGGACTGCATCCCTCAAACTCGCAACAAATTT...GCACTGGAAAATAGGGAACATGTGTATGTCATAAGGAAGGCAATGCAGCCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAAGGCTGAGTTCCAGTTaGCTCACAGCCTCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLRLSSS*LTASRK
Trigger: CTTCCGAGAGGCTGTGAGCAAACTGGAACTCAGCCT...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAGGCTGAGTTCCAGTTaGCTCACAGCCTCTCGGAAG +
Preference number: 5 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTRLSSS*LTASRK
Trigger: CTTCCGAGAGGCTGTGAGCAAACTGGAACTCAGCCT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCTGTCCACTACTGCCTaGCCCCCACTTAATTTACCT +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLSTTA*PPLNLP
Trigger: AGGTAAATTAAGTGGGGGCAAGGCAGTAGTGGACAG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTAAAAATATGTGTGTATaGAGCTCTCCTTGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GLVEARLTATSNSPEQKFKNMCV*SSPWGG
Trigger: TCCTCCCCAAGGAGAGCTCAATACACACATATTTTT...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp TATTACAGCAGCAATGGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCACTCAGTGCTCAATGTaGAATTCCTATCTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: YYSSNGLVEARLTATSNSTQCSM*NSYLPK
Trigger: CTTAGGAAGATAGGAATTCAACATTGAGCACTGAGT...GCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCCATTGCTGCTGTAATA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCACTCAGTGCTCAATGTaGAATTCCTATCTTCCTAAG +
Preference number: 5 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPTQCSM*NSYLPK
Trigger: CTTAGGAAGATAGGAATTCAACATTGAGCACTGAGT...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTATTCTCTACCTGGATTGGGCTTAAGGTGGTAAGGGAAGGGAAAGGTACAGAGCCAAGGTTAAATGACTaGCCTTTTAGACTGGCATTA +
Preference number: 5 (lower is better)
Translates to: LFSTWIGLKVVREGKGTEPRLND*PFRLAL
Trigger: TAATGCCAGTCTAAAAGGCAAGTCATTTAACCTTGG...CTCTGTACCTTTCCCTTCCCTTACCACCTTAAGCCCAATCCAGGTAGAGAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGCTACTGAGTGCTTGCTaGGCTTGTGTTCCCATTACT +
Preference number: 5 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQLLSAC*ACVPIT
Trigger: AGTAATGGGAACACAAGCCAAGCAAGCACTCAGTAG...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGAGAGTGAACAGGGCTTaGCTACTCTGCTCAGGTCAA +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLRVNRA*LLCSGQ
Trigger: TTGACCTGAGCAGAGTAGCAAAGCCCTGTTCACTCT...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS CCA 90 bp ATCCTGCTCTGTGTCTTTTGGTTCACAATGTTATGCACGTCTGATTaGCACAATGTAGGAGAACTTCAGAAATGCTGGAGTCATGGAACA +
Preference number: 5 (lower is better)
Translates to: ILLCVFWFTMLCTSD*HNVGELQKCWSHGT
Trigger: TGTTCCATGACTCCAGCATTTCTGAAGTTCTCCTACATTGTGCCAATCAGACGTGCATAACATTGTGAACCAAAAGACACAGAGCAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS-3UTR CAA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTCTTTCCAGCTGGAGTTaGGACCTCTGGCAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSLSSWS*DLWQFL
Trigger: CAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAG...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCCTCTGGGCAATAACTaGGCTTTTGGTCTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTPLGNN*AFGLSL
Trigger: CAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAGG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CTGATACACCAGCGGAAAATAGGACAGAGGCATTCAGATAGGGCCATATTTCCCCCACTCTTGACAGTGTaGACAAAAATCAATTCCATT +
Preference number: 5 (lower is better)
Translates to: LIHQRKIGQRHSDRAIFPPLLTV*TKINSI
Trigger: AATGGAATTGATTTTTGTCAACACTGTCAAGAGTGG...GGGAAATATGGCCCTATCTGAATGCCTCTGTCCTATTTTCCGCTGGTGTATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CAGTGGCAGCCCAAAGGCATGCATCCAGATATACAGCATAACCACTTTAGAAAACAGGGTCCATCCACATaGAATCAACTGTCTTATCTT +
Preference number: 5 (lower is better)
Translates to: QWQPKGMHPDIQHNHFRKQGPST*NQLSYL
Trigger: AAGATAAGACAGTTGATTCAATGTGGATGGACCCTG...TTTTCTAAAGTGGTTATGCTGTATATCTGGATGCATGCCTTTGGGCTGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS GCA 90 bp TCAGAAATGTGTGCATTTTCCCACCAGGCTAACAGTGGCTACCTCTaGACCACATCACTGATTTCCTGTACACATGACAATAAGTTATTA +
Preference number: 5 (lower is better)
Translates to: SEMCAFSHQANSGYL*TTSLISCTHDNKLL
Trigger: TAATAACTTATTGTCATGTGTACAGGAAATCAGTGATGTGGTGCAGAGGTAGCCACTGTTAGCCTGGTGGGAAAATGCACACATTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344730.7
ENST00000502732.6
ENST00000512653.5
CDS GCA 90 bp ATGTTATGCACGTCTGATTGGCACAATGTAGGAGAACTTCAGAAATaGTGGAGTCATGGAACATGGTTTCAAAAGCTTGGTGTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: MLCTSDWHNVGELQK*WSHGTWFQKLGVFQ
Trigger: CTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTCTGAAGTTCTCCTACATTGTGCCAATCAGACGTGCATAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392043.4
ENST00000668691.1
CDS CCA 90 bp TTATGCACGTCTGATTGGCACAATGTAGGAGAACTTCAGAAATGCTaGAGTCATGGAACATGGTTTCAAAAGCTTGGTGTGTTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: LCTSDWHNVGELQKC*SHGTWFQKLGVFQQ
Trigger: TTGCTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTCTGAAGTTCTCCTACATTGTGCCAATCAGACGTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392043.4
ENST00000668691.1
CDS-3UTR CAA 90 bp CATTCCTTTGTGAGAACCTGTAGGGACTACTATTTTCAAAATCAACACTGGTTAGCAGTCACATACACCTaGCCATCTGCAGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: HSFVRTCRDYYFQNQHWLAVTYT*PSAVVL
Trigger: CAATACCACTGCAGATGGCAAGGTGTATGTGACTGC...TAACCAGTGTTGATTTTGAAAATAGTAGTCCCTACAGGTTCTCACAAAGGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTTTCTCAGCGGCCTGTTaGGTTTTTCTCAGAGCCACT +
Preference number: 5 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTFSAAC*VFLRAT
Trigger: AGTGGCTCTGAGAAAAACCAAACAGGCCGCTGAGAA...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTCCCTTCAGATTGTTGTaGGGCAAGAAAACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTPFRLL*GKKTRE
Trigger: CTCCCTGGTTTTCTTGCCCAACAACAATCTGAAGGG...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GGCCTTGTGGAAGCAAGGCTAACAGCTACTTCCAACAGCCCTGAACAAAAATTTCCACTCTTGACAGTGTaGACAAAAATCAATTCCATT +
Preference number: 5 (lower is better)
Translates to: GLVEARLTATSNSPEQKFPLLTV*TKINSI
Trigger: AATGGAATTGATTTTTGTCAACACTGTCAAGAGTGG...AAATTTTTGTTCAGGGCTGTTGGAAGTAGCTGTTAGCCTTGCTTCCACAAGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp CCAAATGATATAGATATCTTGACTGTTAAGAGTTGGAGACGTTTCAGAAGTTCTTGCTGGGTGAAGATATaGAAGCCGGTCTCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: PNDIDILTVKSWRRFRSSCWVKI*KPVSVV
Trigger: CACCACAGAGACCGGCTTCAATATCTTCACCCAGCA...AGAACTTCTGAAACGTCTCCAACTCTTAACAGTCAAGATATCTATATCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS-3UTR CAA 90 bp ATACAAGCTAAGACAGAGACACAAACCGCTGAAGCCTATCAATACTTAAGCCAGATTGAATCCGCATGTTaGGGGACAAAGTTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: IQAKTETQTAEAYQYLSQIESAC*GTKFCQ
Trigger: TTGACAGAACTTTGTCCCCAAACATGCGGATTCAAT...CTGGCTTAAGTATTGATAGGCTTCAGCGGTTTGTGTCTCTGTCTTAGCTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502732.6
CDS TCA 90 bp GAAGGGAAGGGAATTCACGGTGAGTTCAACAGCGAAACATTTGTTTaGATTCATTATATACACAGTATTTCAGCTGCTGGCTCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: EGKGIHGEFNSETFV*IHYIHSISAAGSRV
Trigger: TACTCTGGAGCCAGCAGCTGAAATACTGTGTATATAATGAATTCAAACAAATGTTTCGCTGTTGAACTCACCGTGAATTCCCTTCCCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS-3UTR CAA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTTTTGGAAGCATGTCATaGGCCCTGTCCACATTCTCT +
Preference number: 5 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTFGSMS*ALSTFS
Trigger: AGAGAATGTGGACAGGGCCAATGACATGCTTCCAAA...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACATTACAATCCCTTAACTaGCATCCCACAACAACAGGG +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTLQSLN*HPTTTG
Trigger: CCCTGTTGTTGTGGGATGCAAGTTAAGGGATTGTAA...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp AAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACACTGCTTGGACAAGGGCCTTaGCTCATTGCTTTTAGAATA +
Preference number: 5 (lower is better)
Translates to: KGLHYNDLYVQRSSRKTLLGQGP*LIAFRI
Trigger: TATTCTAAAAGCAATGAGCAAAGGCCCTTGTCCAAG...CAGTGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS GCA 90 bp TGGTTCCATTTATTTTCAAATCCATTCCCTGTTCTCCATCTCTACTaGCAATGCCTTAGTTCAAATCTGCAACATCTCAACATCTCTCAC +
Preference number: 5 (lower is better)
Translates to: WFHLFSNPFPVLHLY*QCLSSNLQHLNISH
Trigger: GTGAGAGATGTTGAGATGTTGCAGATTTGAACTAAGGCATTGGCAGTAGAGATGGAGAACAGGGAATGGATTTGAAAATAAATGGAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS-3UTR CAA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCTCTCTAAGTACTCCATaGCAGAAGAAATCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTSLSTP*QKKSEW
Trigger: CCACTCAGATTTCTTCTGCAATGGAGTACTTAGAGA...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS-3UTR CAA 90 bp GAGAATGAAGCAGTAACTGGAATTAGACCCGATACCAAGAACATTAATAATACCAAATTTGTTGCGAGTTaGAGGGATGCAGTCCACATA +
Preference number: 5 (lower is better)
Translates to: ENEAVTGIRPDTKNINNTKFVAS*RDAVHI
Trigger: TATGTGGACTGCATCCCTCAAACTCGCAACAAATTT...GGTATTATTAATGTTCTTGGTATCGGGTCTAATTCCAGTTACTGCTTCATTCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS TCA 90 bp GATGCAAAGCTTCTGAAAGACATAAGAAGGGAAGGGAATTCACGGTaGGTTCAACAGCGAAACATTTGTTTGAATTCATTATATACACAG +
Preference number: 5 (lower is better)
Translates to: DAKLLKDIRREGNSR*VQQRNICLNSLYTQ
Trigger: CTGTGTATATAATGAATTCAAACAAATGTTTCGCTGTTGAACTCACCGTGAATTCCCTTCCCTTCTTATGTCTTTCAGAAGCTTTGCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS-3UTR CAA 90 bp GTAAAGGGTCTCCACTATAATGACCTCTATGTACAGAGGTCATCTAGAAAAACAGCAGTTCTCTCTGCTTaGGATTCAAACCTTTTAATT +
Preference number: 5 (lower is better)
Translates to: VKGLHYNDLYVQRSSRKTAVLSA*DSNLLI
Trigger: AATTAAAAGGTTTGAATCCAAAGCAGAGAGAACTGC...TGTTTTTCTAGATGACCTCTGTACATAGAGGTCATTATAGTGGAGACCCTTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS TCA 90 bp AGTCCTTGCTTTCACTGTATTGTTCTCTGGGAATTCATATGCCTCTaGGTATTTGTCTATTTGAGCAAAAGCAGAGTTACCTGTATTAAT +
Preference number: 5 (lower is better)
Translates to: SPCFHCIVLWEFICL*VFVYLSKSRVTCIN
Trigger: ATTAATACAGGTAACTCTGCTTTTGCTCAAATAGACAAATACTCAGAGGCATATGAATTCCCAGAGAACAATACAGTGAAAGCAAGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662960.1
CDS-3UTR CAA 90 bp AATAATAGTAGTAGTAGAACATTTATAGAGTGTGCTCATTGTGTGCCAGGCACTGAACAAAAATTTCTCTaGGTACATTCCCAGCTTTCT +
Preference number: 5 (lower is better)
Translates to: NNSSSRTFIECAHCVPGTEQKFL*VHSQLS
Trigger: AGAAAGCTGGGAATGTACCAAGAGAAATTTTTGTTC...AGTGCCTGGCACACAATGAGCACACTCTATAAATGTTCTACTACTACTATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344730.7
ENST00000502732.6
CDS CCA 72 bp CCTGCTCTCGCGTACTCCCGCGCCCCCGCCGACCCCTaGTCACATTCCTCCTCGGCTCCGGCCTCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PALAYSRAPADP*SHSSSAPASGS
Trigger: GGAGCCCGAGGCCGGAGCCGAGGAGGAATGTGACCAGGGGTCGGCGGGGGCGCGGGAGTACGCGAGAGCAGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000392043.4
ENST00000502732.6
ENST00000668691.1
CDS CCA 72 bp TGGTCACATTCCTCCTCGGCTCCGGCCTCGGGCTCCTaGCGCTGCTCCGGTCTCTCCCTCCCAGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: WSHSSSAPASGS*RCSGLSLPAQA
Trigger: GGCCTGGGCTGGGAGGGAGAGACCGGAGCAGCGCCAGGAGCCCGAGGCCGGAGCCGAGGAGGAATGTGACCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392043.4
ENST00000502732.6
ENST00000668691.1
CDS GCA 72 bp CAGCCGCCGCGCTGCCTCCAGGCGACTCACAGATTCTaGTTTTCCCTCCTCCTGTCGCGGCTCCGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: QPPRCLQATHRF*FSLLLSRLRAP
Trigger: GGGGGCGCGGAGCCGCGACAGGAGGAGGGAAAAGCAGAATCTGTGAGTCGCCTGGAGGCAGCGCGGCGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392043.4
ENST00000502732.6
ENST00000668691.1
CDS TCA 72 bp TTGGCTGGCGAGATGGAAGATGTGGGCAGAGGCACTTaGGGTGGAGGCATCACTGGCCTCCCAGCTTTCCCA +
Preference number: 6 (lower is better)
Translates to: LAGEMEDVGRGT*GGGITGLPAFP
Trigger: TGGGAAAGCTGGGAGGCCAGTGATGCCTCCACCTCAAGTGCCTCTGCCCACATCTTCCATCTCGCCAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp GGCTCTTCTGTAGGGTCTGAGCAGATGGACGGATGCTaGAGTAGTCTCATCACTGGTGGTGGGGGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: GSSVGSEQMDGC*SSLITGGGGGA
Trigger: TGCCCCACCCCCACCACCAGTGATGAGACTACTGCAGCATCCGTCCATCTGCTCAGACCCTACAGAAGAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS TCA 72 bp AGAGTGGGTGAGATAAGGACTGGCACTTTGTGGTTGTaGGTGGTTGGGAGGACGGGGGCAGCCTTGGCTGGA +
Preference number: 6 (lower is better)
Translates to: RVGEIRTGTLWL*VVGRTGAALAG
Trigger: TCCAGCCAAGGCTGCCCCCGTCCTCCCAACCACTCACAACCACAAAGTGCCAGTCCTTATCTCACCCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp CTCTCCATCCTCTGGAACTCCAGCCATCCCAAGTCGTaGCCCACCATTCTTCTCTTTACCCTTGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LSILWNSSHPKS*PTILLFTLGGS
Trigger: GCTGCCCCCAAGGGTAAAGAGAAGAATGGTGGGGCACGACTTGGGATGGCTGGAGTTCCAGAGGATGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp TCAAGCAGCTGGTGTCCAGTGTCTACCAGCTGGCTGTaGGGCACAGGTTCCGTGAGTGCACTGGACAGTAGG +
Preference number: 6 (lower is better)
Translates to: SSSWCPVSTSWL*GTGSVSALDSR
Trigger: CCTACTGTCCAGTGCACTCACGGAACCTGTGCCCAACAGCCAGCTGGTAGACACTGGACACCAGCTGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS TCA 72 bp CAGTGTCTACCAGCTGGCTGTTGGGCACAGGTTCCGTaGGTGCACTGGACAGTAGGTCAGCACATTCCAGCA +
Preference number: 6 (lower is better)
Translates to: QCLPAGCWAQVP*VHWTVGQHIPA
Trigger: TGCTGGAATGTGCTGACCTACTGTCCAGTGCACTCACGGAACCTGTGCCCAACAGCCAGCTGGTAGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp GAGTTTGGACCTCTGGCAGTTCCTGGGAAGGGTCATTaGCATCCTATCCTGCTCTGGAAGCCCCGTGAGTTC +
Preference number: 6 (lower is better)
Translates to: EFGPLAVPGKGH*HPILLWKPREF
Trigger: GAACTCACGGGGCTTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344730.7
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
CDS CCA 72 bp TACCTGCTGTGCCATTGGCCATTTTGGCTGGCGAGATaGAAGATGTGGGCAGAGGCACTTGAGGTGGAGGCA +
Preference number: 6 (lower is better)
Translates to: YLLCHWPFWLAR*KMWAEALEVEA
Trigger: TGCCTCCACCTCAAGTGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp GGAGTTTGGACCTCTGGCAGTTCCTGGGAAGGGTCATaGCCATCCTATCCTGCTCTGGAAGCCCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: GVWTSGSSWEGS*PSYPALEALRT
Trigger: TGTCCTCAGGGCTTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CCA 72 bp GAGAAGAGGTGGACACTGTCCTTTCCAGCTGGAGTTTaGACCTCTGGCAGTTCCTGGGAAGGGTCATTGCCA +
Preference number: 6 (lower is better)
Translates to: EKRWTLSFPAGV*TSGSSWEGSLP
Trigger: TGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAGGACAGTGTCCACCTCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 90 bp TTTCCAGCTGGAGTTTGGACCTCTGGCAGTTCCTGGGAAGGGTCATaGCCATCCTATCCTGCTCTGGAAGCCCTGAGGACATGGAAGATG +
Preference number: 6 (lower is better)
Translates to: FPAGVWTSGSSWEGS*PSYPALEALRTWKM
Trigger: CATCTTCCATGTCCTCAGGGCTTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS TCA 72 bp CTGTGGAGTGATGGTGTACAAGCTCTGCCAAGGTGCTaGAGCGGCTCTCAGCAGTCACATACACCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: LWSDGVQALPRC*SGSQQSHTPCH
Trigger: ATGGCAAGGTGTATGTGACTGCTGAGAGCCGCTTCAGCACCTTGGCAGAGCTTGTACACCATCACTCCACAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000668691.1
CDS TCA 72 bp TGTAATGTTGTCACCAGCCCATCAGCCACTGTGGAGTaGTGGTGTACAAGCTCTGCCAAGGTGCTGAAGCGG +
Preference number: 6 (lower is better)
Translates to: CNVVTSPSATVE*WCTSSAKVLKR
Trigger: CCGCTTCAGCACCTTGGCAGAGCTTGTACACCATCACTCCACAGTGGCTGATGGGCTGGTGACAACATTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000668691.1
CDS TCA 72 bp TGGGTGGCACCAGATTCGCCTCTTGCTGGGCAGGAGTaGAAGAGAACCCATCAGCATGCTGTAGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: WVAPDSPLAGQE*KRTHQHAVEKQ
Trigger: TTGCTTCTCTACAGCATGCTGATGGGTTCTCTTTCACTCCTGCCCAGCAAGAGGCGAATCTGGTGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CCA 72 bp TCCTTTCCAGCTGGAGTTTGGACCTCTGGCAGTTCCTaGGAAGGGTCATTGCCATCCTATCCTGCTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SFPAGVWTSGSS*EGSLPSYPALE
Trigger: TTCCAGAGCAGGATAGGATGGCAATGACCCTTCCCAGGAACTGCCAGAGGTCCAAACTCCAGCTGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp TTAGGGTCACTCTCAGTGGCTCCGAGCAAGTTCTCCTaGGAGCTCCACCTGATAGCCTCATTTAGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: LGSLSVAPSKFS*ELHLIASFSAW
Trigger: CCAGGCACTAAATGAGGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGGAGCCACTGAGAGTGACCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000508127.1
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000659126.1
ENST00000660584.1
ENST00000668691.1
CDS CAA 72 bp GAAGAGCTGTGGCTCCTCTGGGCAATAACTTGGCTTTaGGTCTCTCCCTGCTTGGAGCAGCACTTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: EELWLLWAITWL*VSPCLEQHFPL
Trigger: CAGAGGAAAGTGCTGCTCCAAGCAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAGGAGCCACAGCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp CTGAGAGGAAGAGCTGTGGCTCCTCTGGGCAATAACTaGGCTTTTGGTCTCTCCCTGCTTGGAGCAGCACTT +
Preference number: 6 (lower is better)
Translates to: LRGRAVAPLGNN*AFGLSLLGAAL
Trigger: AAGTGCTGCTCCAAGCAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAGGAGCCACAGCTCTTCCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp AGAGCCACTTTAGTACCTGCTGTGCCATTGGCCATTTaGGCTGGCGAGATGGAAGATGTGGGCAGAGGCACT +
Preference number: 6 (lower is better)
Translates to: RATLVPAVPLAI*AGEMEDVGRGT
Trigger: AGTGCCTCTGCCCACATCTTCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 90 bp GAGGGTGTTCTGAGAGGAAGAGCTGTGGCTCCTCTGGGCAATAACTaGGCTTTTGGTCTCTCCCTGCTTGGAGCAGCACTTTCCTCTGAT +
Preference number: 6 (lower is better)
Translates to: EGVLRGRAVAPLGNN*AFGLSLLGAALSSD
Trigger: ATCAGAGGAAAGTGCTGCTCCAAGCAGGGAGAGACCAAAAGCCAAGTTATTGCCCAGAGGAGCCACAGCTCTTCCTCTCAGAACACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS TCA 72 bp GAGCTGCACGTCAGCTGGAGTGTGTTTCAGAGTGGGTaGGATAAGGACTGGCACTTTGTGGTTGTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: ELHVSWSVFQSG*DKDWHFVVVSG
Trigger: ACCACTCACAACCACAAAGTGCCAGTCCTTATCTCACCCACTCTGAAACACACTCCAGCTGACGTGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 72 bp CTGGACAGTAGGTCAGCACATTCCAGCAGGGCCTCTTaGCTGATTTTGTCTGCTGAGATTTTCTCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: LDSRSAHSSRAS*LILSAEIFSAA
Trigger: GGCCGCTGAGAAAATCTCAGCAGACAAAATCAGCAAAGAGGCCCTGCTGGAATGTGCTGACCTACTGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 90 bp ACGAAGAGATTAGGGTCACTCTCAGTGGCTCCGAGCAAGTTCTCCTaGGAGCTCCACCTGATAGCCTCATTTAGTGCCTGGGGTTCAACA +
Preference number: 6 (lower is better)
Translates to: TKRLGSLSVAPSKFS*ELHLIASFSAWGST
Trigger: TGTTGAACCCCAGGCACTAAATGAGGCTATCAGGTGGAGCTCCAAGGAGAACTTGCTCGGAGCCACTGAGAGTGACCCTAATCTCTTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000508127.1
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000659126.1
ENST00000660584.1
ENST00000668691.1
CDS CAA 90 bp GTGAGTGCACTGGACAGTAGGTCAGCACATTCCAGCAGGGCCTCTTaGCTGATTTTGTCTGCTGAGATTTTCTCAGCGGCCTGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: VSALDSRSAHSSRAS*LILSAEIFSAACLV
Trigger: AACCAAACAGGCCGCTGAGAAAATCTCAGCAGACAAAATCAGCAAAGAGGCCCTGCTGGAATGTGCTGACCTACTGTCCAGTGCACTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp GGCCTGTTTGGTTTTTCTCAGAGCCACTTTAGTACCTaGTGTGCCATTGGCCATTTTGGCTGGCGAGATGGA +
Preference number: 6 (lower is better)
Translates to: GLFGFSQSHFST*CAIGHFGWRDG
Trigger: TCCATCTCGCCAGCCAAAATGGCCAATGGCACAGCAGGTACTAAAGTGGCTCTGAGAAAAACCAAACAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp TTCGTCCACGCTGCTGCATGTGGCAGGGGTTCTCATTaGTGTGTAGCATGCCAACGTGTGAATATACCACAA +
Preference number: 6 (lower is better)
Translates to: FVHAAACGRGSH*CVACQRVNIPQ
Trigger: TTGTGGTATATTCACACGTTGGCATGCTACACAGCAATGAGAACCCCTGCCACATGCAGCAGCGTGGACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS GCA 72 bp GCTGCATGTGGCAGGGGTTCTCATTGCTGTGTAGCATaGCAACGTGTGAATATACCACAATCCACCTGTTCT +
Preference number: 6 (lower is better)
Translates to: AACGRGSHCCVA*QRVNIPQSTCS
Trigger: AGAACAGGTGGATTGTGGTATATTCACACGTTGGCATGCTACACAGCAATGAGAACCCCTGCCACATGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS CCA 72 bp AGTTTGACCTTGGAAAAGGCTTGGAAGTGTCATCACTaGCTGTGGGTTTACCTGCTCGTAAGCCCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SLTLEKAWKCHH*LWVYLLVSPVS
Trigger: AGACACTGGGCTTACGAGCAGGTAAACCCACAGCCAGTGATGACACTTCCAAGCCTTTTCCAAGGTCAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CCA 72 bp GAAATGCTGGAGTCATGGAACATGGTTTCAAAAGCTTaGTGTGTTTCAGCAAAAGAGGGCCTATCGGCAGGG +
Preference number: 6 (lower is better)
Translates to: EMLESWNMVSKA*CVSAKEGLSAG
Trigger: CCCTGCCGATAGGCCCTCTTTTGCTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
ENST00000668691.1
CDS CCA 72 bp GGGCCAAGAAAACCAACATGTCTAGAGTTTTGCACATaGCCCATGATTCTCCTCCTCAACTGCAGGCTAACA +
Preference number: 6 (lower is better)
Translates to: GPRKPTCLEFCT*PMILLLNCRLT
Trigger: TGTTAGCCTGCAGTTGAGGAGGAGAATCATGGGCCATGTGCAAAACTCTAGACATGTTGGTTTTCTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662960.1
CDS CAA 72 bp GCTGTGGGTTTACCTGCTCGTAAGCCCAGTGTCTTTTaGATTAAGCGTGGTGTAAAGAAGCCTGTGATGCCA +
Preference number: 6 (lower is better)
Translates to: AVGLPARKPSVF*IKRGVKKPVMP
Trigger: TGGCATCACAGGCTTCTTTACACCACGCTTAATCAAAAAGACACTGGGCTTACGAGCAGGTAAACCCACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CAA 90 bp TCAATGTTCTCCTTGTTCTCCACCTGTTTCTTCAGTGTCCGAGTCTaGGAAGGAAGTATAGGTAGCCGGGGCAGGTATGGAACAACAGAT +
Preference number: 6 (lower is better)
Translates to: SMFSLFSTCFFSVRV*EGSIGSRGRYGTTD
Trigger: ATCTGTTGTTCCATACCTGCCCCGGCTACCTATACTTCCTTCCAAGACTCGGACACTGAAGAAACAGGTGGAGAACAAGGAGAACATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS CAA 90 bp GAGAACTTCAGAAATGCTGGAGTCATGGAACATGGTTTCAAAAGCTaGGTGTGTTTCAGCAAAAGAGGGCCTATCGGCAGGGCTCCACTT +
Preference number: 6 (lower is better)
Translates to: ENFRNAGVMEHGFKS*VCFSKRGPIGRAPL
Trigger: AAGTGGAGCCCTGCCGATAGGCCCTCTTTTGCTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTCTGAAGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392043.4
ENST00000668691.1
CDS CAA 90 bp GAAGCAGAATTTTCTGTGGCATCTTGTGCCCCTTCAATGTTCTCCTaGTTCTCCACCTGTTTCTTCAGTGTCCGAGTCTTGGAAGGAAGT +
Preference number: 6 (lower is better)
Translates to: EAEFSVASCAPSMFS*FSTCFFSVRVLEGS
Trigger: ACTTCCTTCCAAGACTCGGACACTGAAGAAACAGGTGGAGAACAAGGAGAACATTGAAGGGGCACAAGATGCCACAGAAAATTCTGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
CDS GCA 72 bp TGTGCATTTTCCCACCAGGCTAACAGTGGCTACCTCTaGACCACATCACTGATTTCCTGTACACATGACAAT +
Preference number: 6 (lower is better)
Translates to: CAFSHQANSGYL*TTSLISCTHDN
Trigger: ATTGTCATGTGTACAGGAAATCAGTGATGTGGTGCAGAGGTAGCCACTGTTAGCCTGGTGGGAAAATGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344730.7
ENST00000502732.6
ENST00000512653.5
CDS CAA 72 bp GACATGGAAGATGTAGAGTTTGACCTTGGAAAAGGCTaGGAAGTGTCATCACTGGCTGTGGGTTTACCTGCT +
Preference number: 6 (lower is better)
Translates to: DMEDVEFDLGKG*EVSSLAVGLPA
Trigger: AGCAGGTAAACCCACAGCCAGTGATGACACTTCCAAGCCTTTTCCAAGGTCAAACTCTACATCTTCCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CCA 72 bp TCTTCTCTAAGTACTCCATTGCAGAAGAAATCTGAGTaGCCATGTAGAGCAGCACAACTGCAGTCACCTCTT +
Preference number: 6 (lower is better)
Translates to: SSLSTPLQKKSE*PCRAAQLQSPL
Trigger: AAGAGGTGACTGCAGTTGTGCTGCTCTACATGGCCACTCAGATTTCTTCTGCAATGGAGTACTTAGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000662960.1
ENST00000668691.1
CDS CCA 72 bp TTAATATACACCATGCTGCTTCCCATCTTCTGGCCTTaGTTCACACAGTCCAGACTAACTGGAATGGGTTCT +
Preference number: 6 (lower is better)
Translates to: LIYTMLLPIFWP*FTQSRLTGMGS
Trigger: AGAACCCATTCCAGTTAGTCTGGACTGTGTGAACCAAGGCCAGAAGATGGGAAGCAGCATGGTGTATATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659126.1
CDS CCA 72 bp TTAGTTCAAATCTGCAACATCTCAACATCTCTCACCTaGACTACTGCCTCCAGTCTTGTCTCCCTCAAATCC +
Preference number: 6 (lower is better)
Translates to: LVQICNISTSLT*TTASSLVSLKS
Trigger: GGATTTGAGGGAGACAAGACTGGAGGCAGTAGTCCAGGTGAGAGATGTTGAGATGTTGCAGATTTGAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS CAA 72 bp TTTAATATACACCATGCTGCTTCCCATCTTCTGGCCTaGGTTCACACAGTCCAGACTAACTGGAATGGGTTC +
Preference number: 6 (lower is better)
Translates to: FNIHHAASHLLA*VHTVQTNWNGF
Trigger: GAACCCATTCCAGTTAGTCTGGACTGTGTGAACCAAGGCCAGAAGATGGGAAGCAGCATGGTGTATATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659126.1
CDS TCA 72 bp CAACAATACCCCAAAAGCCCAGACGTCAGATTTAATTaGGAAGGTATTGTAGGCAAGACTCTCTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: QQYPKSPDVRFN*EGIVGKTLWCC
Trigger: ACAGCACCAGAGAGTCTTGCCTACAATACCTTCTCAATTAAATCTGACGTCTGGGCTTTTGGGGTATTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504405.5
ENST00000507173.5
ENST00000511413.5
ENST00000512653.5
ENST00000668691.1
CDS CCA 72 bp GTTGCATTCTCGGAGGTAATCCAGCAAATTCCCGTATaGCATGTATTCAGTCACAATGTAAAATGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: VAFSEVIQQIPV*HVFSHNVKWWL
Trigger: GAGCCACCATTTTACATTGTGACTGAATACATGCCATACGGGAATTTGCTGGATTACCTCCGAGAATGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000344730.7
ENST00000367623.8
ENST00000392043.4
ENST00000502732.6
ENST00000504324.1
ENST00000504405.5
ENST00000507173.5
ENST00000509520.5
ENST00000511413.5
ENST00000512653.5
ENST00000662960.1
ENST00000668691.1
CDS TCA 72 bp CATGCTGTAGAGAAGCAACAGATGAGAAGTTACCCGTaGGTTCGTATTTCTTATGGGGCTGATTCTCCATTT +
Preference number: 6 (lower is better)
Translates to: HAVEKQQMRSYP*VRISYGADSPF
Trigger: AAATGGAGAATCAGCCCCATAAGAAATACGAACTCACGGGTAACTTCTCATCTGTTGCTTCTCTACAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367623.8
ENST00000502732.6
ENST00000512653.5
CDS CCA 72 bp GCACAATGTAGGAGAACTTCAGAAATGCTGGAGTCATaGAACATGGTTTCAAAAGCTTGGTGTGTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: AQCRRTSEMLES*NMVSKAWCVSA
Trigger: TGCTGAAACACACCAAGCTTTTGAAACCATGTTCCATGACTCCAGCATTTCTGAAGTTCTCCTACATTGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392043.4
ENST00000668691.1
CDS CCA 72 bp CCCTTATCCATGAGGAATATGTTCCAAGACCCCCAGTaGATGCTTAAAATCAATCAGGATAGTACCAAATCC +
Preference number: 6 (lower is better)
Translates to: PLSMRNMFQDPQ*MLKINQDSTKS
Trigger: GGATTTGGTACTATCCTGATTGATTTTAAGCATCCACTGGGGGTCTTGGAACATATTCCTCATGGATAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659126.1
CDS CCA 72 bp GAATACGTTGCTAGCATCATCCTGCTCTGTGTCTTTTaGTTCACAATGTTATGCACGTCTGATTGGCACAAT +
Preference number: 6 (lower is better)
Translates to: EYVASIILLCVF*FTMLCTSDWHN
Trigger: ATTGTGCCAATCAGACGTGCATAACATTGTGAACCAAAAGACACAGAGCAGGATGATGCTAGCAACGTATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS CCA 72 bp TGTGTCTTTTGGTTCACAATGTTATGCACGTCTGATTaGCACAATGTAGGAGAACTTCAGAAATGCTGGAGT +
Preference number: 6 (lower is better)
Translates to: CVFWFTMLCTSD*HNVGELQKCWS
Trigger: ACTCCAGCATTTCTGAAGTTCTCCTACATTGTGCCAATCAGACGTGCATAACATTGTGAACCAAAAGACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS CAA 90 bp CATAAGAAGGGAAGGGAATTCACGGTGAGTTCAACAGCGAAACATTaGTTTGAATTCATTATATACACAGTATTTCAGCTGCTGGCTCCA +
Preference number: 6 (lower is better)
Translates to: HKKGREFTVSSTAKH*FEFIIYTVFQLLAP
Trigger: TGGAGCCAGCAGCTGAAATACTGTGTATATAATGAATTCAAACAAATGTTTCGCTGTTGAACTCACCGTGAATTCCCTTCCCTTCTTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS TCA 72 bp AAAGTAATAGCAATTGTGCACAAGCTGAAGACTATGTaGGCCCCACCTGCAATACTGCTTTGCAAAATGATT +
Preference number: 6 (lower is better)
Translates to: KVIAIVHKLKTM*APPAILLCKMI
Trigger: AATCATTTTGCAAAGCAGTATTGCAGGTGGGGCTCACATAGTCTTCAGCTTGTGCACAATTGCTATTACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000662960.1
CDS GCA 72 bp TTTGGAGTTACTATGAATACGTTGCTAGCATCATCCTaGTCTGTGTCTTTTGGTTCACAATGTTATGCACGT +
Preference number: 6 (lower is better)
Translates to: FGVTMNTLLASS*SVSFGSQCYAR
Trigger: ACGTGCATAACATTGTGAACCAAAAGACACAGAGCAGGATGATGCTAGCAACGTATTCATAGTAACTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS CAA 72 bp AAGCTGGTTTATAAGGGAGTCCTTGCTTTCACTGTATaGTTCTCTGGGAATTCATATGCCTCTGAGTATTTG +
Preference number: 6 (lower is better)
Translates to: KLVYKGVLAFTV*FSGNSYASEYL
Trigger: CAAATACTCAGAGGCATATGAATTCCCAGAGAACAATACAGTGAAAGCAAGGACTCCCTTATAAACCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662960.1
CDS CAA 72 bp TTAGGTTGTTTCCAGTTTGGAGTTACTATGAATACGTaGCTAGCATCATCCTGCTCTGTGTCTTTTGGTTCA +
Preference number: 6 (lower is better)
Translates to: LGCFQFGVTMNT*LASSCSVSFGS
Trigger: TGAACCAAAAGACACAGAGCAGGATGATGCTAGCAACGTATTCATAGTAACTCCAAACTGGAAACAACCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000668691.1
CDS TCA 72 bp CTTCTGAAAGACATAAGAAGGGAAGGGAATTCACGGTaGGTTCAACAGCGAAACATTTGTTTGAATTCATTA +
Preference number: 6 (lower is better)
Translates to: LLKDIRREGNSR*VQQRNICLNSL
Trigger: TAATGAATTCAAACAAATGTTTCGCTGTTGAACTCACCGTGAATTCCCTTCCCTTCTTATGTCTTTCAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1
CDS CAA 72 bp ACGTATGTTTGTTCCCCAAACATCATAACATGTTCCTaGTATCTGGAATGGTATTCTTCTCCTACCAAAAGT +
Preference number: 6 (lower is better)
Translates to: TYVCSPNIITCS*YLEWYSSPTKS
Trigger: ACTTTTGGTAGGAGAAGAATACCATTCCAGATACAAGGAACATGTTATGATGTTTGGGGAACAAACATACGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659126.1
CDS CCA 72 bp TGTTTGAATTCATTATATACACAGTATTTCAGCTGCTaGCTCCAGAGTAGGAAAGAACTGTACAGTATAAAG +
Preference number: 6 (lower is better)
Translates to: CLNSLYTQYFSC*LQSRKELYSIK
Trigger: CTTTATACTGTACAGTTCTTTCCTACTCTGGAGCCAGCAGCTGAAATACTGTGTATATAATGAATTCAAACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660584.1