RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABI3BP (Homo sapiens)

Ensembl gene IDs: ENSG00000154175

Ensembl transcript IDs: ENST00000284322.10, ENST00000459682.1, ENST00000466947.5, ENST00000469764.1, ENST00000470336.5, ENST00000471714.6, ENST00000471901.5, ENST00000475896.5, ENST00000478235.5, ENST00000482765.5, ENST00000486770.7, ENST00000487012.5, ENST00000495063.6, ENST00000495591.5, ENST00000497021.1, ENST00000497395.5, ENST00000527258.5, ENST00000527943.5, ENST00000530236.6, ENST00000530539.2, ENST00000532144.1, ENST00000533795.5, ENST00000533855.5, ENST00000534413.5

Found 754 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGACAGGAAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGAGTTTTACCTGAACATGACTTCTTT +
Preference number: 1 (lower is better)
Translates to: QDRKTELGVRVPTTS*RGLRERVLPEHDFF
Trigger: AAAGAAGTCATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 90 bp AGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTaGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: RTSSKPSHLGDQAHK*LQAMFSWIALYEKQ
Trigger: CTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR GCA 90 bp TCCCTTCAGCGGGAAGAGGGAAGTACTGGTTTGGTGATACATTGCTaGCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGACTTG +
Preference number: 1 (lower is better)
Translates to: SLQREEGSTGLVIHC*HIPGEDLQALHLDL
Trigger: CAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCTTCCCGCTGAAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR TCA 90 bp TTCTGTGAATTTCCCTTCAGCGGGAAGAGGGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTAC +
Preference number: 1 (lower is better)
Translates to: FCEFPFSGKREVLVW*YIAAISQEKTFKLY
Trigger: GTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCTTCCCGCTGAAGGGAAATTCACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR GCA 90 bp AGCATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTaGAACAGTGCAGCAAGGATTCCCATTCCCCGCCTAAAGGACAAT +
Preference number: 1 (lower is better)
Translates to: SMLKGKYRERSFQND*NSAARIPIPRLKDN
Trigger: ATTGTCCTTTAGGCGGGGAATGGGAATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
3UTR CCA 90 bp ACTATAGCTTCTGTGAATTTCCCTTCAGCGGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTGCCATATCCCAGGAGAAGACCTTCA +
Preference number: 1 (lower is better)
Translates to: TIASVNFPSAGRGKY*FGDTLLPYPRRRPS
Trigger: TGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCTTCCCGCTGAAGGGAAATTCACAGAAGCTATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTaGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAAT +
Preference number: 1 (lower is better)
Translates to: HLGDQAHKWLQAMFS*IALYEKQLLPMLNN
Trigger: ATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR CCA 90 bp GCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGACTTaGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGAT +
Preference number: 1 (lower is better)
Translates to: AAISQEKTFKLYIWT*TQELQEDGVTCGID
Trigger: ATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 90 bp TACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTaGACTTGGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGT +
Preference number: 1 (lower is better)
Translates to: YIAAISQEKTFKLYI*TWTQELQEDGVTCG
Trigger: ACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR TCA 90 bp TGTTTGAAAAATACAAAATGTAGCGTTGATAAGATTGAAGCATGTTaGAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACA +
Preference number: 1 (lower is better)
Translates to: CLKNTKCSVDKIEAC*KVSTGKGPFRMTAT
Trigger: TGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACATGCTTCAATCTTATCAACGCTACATTTTGTATTTTTCAAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
3UTR-3UTR GCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCTTTATTGGGACAGCCTaGCAGGGTTCAGGTTCCTTG +
Preference number: 2 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPFIGTA*QGSGSL
Trigger: CAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAA...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR-3UTR CCA 90 bp TCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTACCTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTT +
Preference number: 2 (lower is better)
Translates to: SVSECQPPAAEVCENEFYLVVLM*TLRFGL
Trigger: AAGGCCAAACCTCAAAGTCCACATCAATACCACAAG...GTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR-3UTR CCA 90 bp GTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTACCTGAACATGACGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTG +
Preference number: 2 (lower is better)
Translates to: VPTTSCRGLRERVLPEHDGRGKY*FGDTLL
Trigger: CAGCAATGTATCACCAAACCAGTACTTCCCTCTTCC...GTCATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR-3UTR CCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTCTTTAGGACTTTATTaGGACAGCCTGCCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKSLGLY*DSLPGF
Trigger: GAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR-3UTR CCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGCAAGCCATGTTCTCCTaGATAGCTCTGTACGAGAAG +
Preference number: 2 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKQAMFS*IALYEK
Trigger: CTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTG...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR-3UTR TCA 90 bp TGGAGGTGGAGCAGGTCGCACAACTATCAGATATTTCGGCTCTGCATCAACTATGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCC +
Preference number: 2 (lower is better)
Translates to: WRWSRSHNYQIFRLCINYEVLVW*YIAAIS
Trigger: GGATATGGCAGCAATGTATCACCAAACCAGTACTTC...ATAGTTGATGCAGAGCCGAAATATCTGATAGTTGTGCGACCTGCTCCACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CAA 90 bp ATACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTaGGACTTGGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGG +
Preference number: 2 (lower is better)
Translates to: IHCCHIPGEDLQALH*DLDARTSRGWSHLW
Trigger: CCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CAA 90 bp GGACTTGGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTTGGCCTTTTACATGACATGTTCTCT +
Preference number: 2 (lower is better)
Translates to: GLGRKNFKRMESLVV*MWTLRFGLLHDMFS
Trigger: AGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR GCA 72 bp AACCCCAGGACAGGAAGACCGAGCTCGGTGTCAGAGTaGCAACCACCAGCTGCAGAGGTTTGCGAGAACGAG +
Preference number: 3 (lower is better)
Translates to: NPRTGRPSSVSE*QPPAAEVCENE
Trigger: CTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTCCTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR-3UTR CAA 90 bp CCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGCTTCAAGCTTTACATTaGGACTTGGACGCAAGAACT +
Preference number: 3 (lower is better)
Translates to: PSSVSECQPPAAEVCENELQALH*DLDART
Trigger: AGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAG...CTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR GCA 72 bp AAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGAGTTTTACCTGAACAT +
Preference number: 3 (lower is better)
Translates to: KTELGVRVPTTS*RGLRERVLPEH
Trigger: ATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 72 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTaGATAGCTCTGTACGAGAAGCAGTTGCTACCCATG +
Preference number: 3 (lower is better)
Translates to: DQAHKWLQAMFS*IALYEKQLLPM
Trigger: CATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTTCTTTAGGACTTTATaGGGACAGCCTGCCAGGGTT +
Preference number: 3 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEFFRTL*GQPARV
Trigger: AACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR-3UTR CAA 90 bp AAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAAGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACAT +
Preference number: 3 (lower is better)
Translates to: KTELGVRVPTTSCRGLREVLMWT*RFGLLH
Trigger: ATGTAAAAGGCCAAACCTCAAAGTCCACATCAATAC...TTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR TCA 72 bp TTTCCCTTCAGCGGGAAGAGGGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCCCAGGAGAAGACCTTC +
Preference number: 3 (lower is better)
Translates to: FPFSGKREVLVW*YIAAISQEKTF
Trigger: GAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCTTCCCGCTGAAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR GCA 72 bp AAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTaGAACAGTGCAGCAAGGATTCCCATTCCCCGCCTA +
Preference number: 3 (lower is better)
Translates to: KGKYRERSFQND*NSAARIPIPRL
Trigger: TAGGCGGGGAATGGGAATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
3UTR CCA 72 bp TCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTaGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTAC +
Preference number: 3 (lower is better)
Translates to: SKPSHLGDQAHK*LQAMFSWIALY
Trigger: GTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR GCA 72 bp CGGGAAGAGGGAAGTACTGGTTTGGTGATACATTGCTaGCATATCCCAGGAGAAGACCTTCAAGCTTTACAT +
Preference number: 3 (lower is better)
Translates to: REEGSTGLVIHC*HIPGEDLQALH
Trigger: ATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCTTCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 72 bp GCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTaGACTTGGACGCAAGAACTTCAAGAGGATGGAGTC +
Preference number: 3 (lower is better)
Translates to: AISQEKTFKLYI*TWTQELQEDGV
Trigger: GACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR TCA 72 bp TTGCGAGAACGAGTTTTACCTGAACATGACTTCTTTTaGCTTGGAGGTGGAGCAGGTCGCACAACTATCAGA +
Preference number: 3 (lower is better)
Translates to: LRERVLPEHDFF*LGGGAGRTTIR
Trigger: TCTGATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTCAGGTAAAACTCGTTCTCGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTCGTGCATTATCTTTTaGTGCTCAGACTTGACTTCA +
Preference number: 3 (lower is better)
Translates to: GKYRERSFQNDCNSAARISCIIF*CSDLTS
Trigger: TGAAGTCAAGTCTGAGCACAAAAAGATAATGCACGA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
3UTR-3UTR CAA 90 bp GGTGATACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGAGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: GDTLLPYPRRRPSSFTFGESLVV*MWTLRF
Trigger: AAACCTCAAAGTCCACATCAATACCACAAGTGACTC...TCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CCA 72 bp AACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACATGACATGTTC +
Preference number: 3 (lower is better)
Translates to: NFKRMESLVVLM*TLRFGLLHDMF
Trigger: GAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCGTGCATTATCTTTTaGTGCTCAGACTTGACTTCA +
Preference number: 3 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASCIIF*CSDLTS
Trigger: TGAAGTCAAGTCTGAGCACAAAAAGATAATGCACGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
3UTR TCA 72 bp AATACAAAATGTAGCGTTGATAAGATTGAAGCATGTTaGAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATG +
Preference number: 3 (lower is better)
Translates to: NTKCSVDKIEAC*KVSTGKGPFRM
Trigger: CATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACATGCTTCAATCTTATCAACGCTACATTTTGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTTCAGGTTTGGTTCTTaGCGGTTTGGGCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEFRFGS*RFGPGA
Trigger: CGCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTACCTCGCATGGGGAATaGTGCTGGTGGGTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIATSHGE*CWWVPR
Trigger: GCGAGGCACCCACCAGCATCATTCCCCATGCGAGGT...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp AGGAAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACATGACTTCTTTTaGCTTGGAGGTGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RKTELGVRVPTTSCRGLREHDFF*LGGGAG
Trigger: ACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTC...TCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGATGGCAGTAGAGTCTaGGGTTCTGGGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEDGSRV*GSGAGL
Trigger: CAAACCTGCCCCAGAACCTCAGACTCTACTGCCATC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GACAGGAAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCTTTTGACTTGGAGGTaGAGCAGGTCGCACAACTAT +
Preference number: 4 (lower is better)
Translates to: DRKTELGVRVPTTSCRGLLLTWR*SRSHNY
Trigger: ATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAG...CAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTCTGGGTGGCAAGGGTaGGCGGCGAGTCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISGWQG*AASPWL
Trigger: AAGCCAGGGACTCGCCGCCCACCCTTGCCACCCAGA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGGTCTGCAGTGTCTCTaGGCGTGGCGTGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEGLQCL*AWRGFM
Trigger: CATAAAACCACGCCACGCCCAGAGACACTGCAGACC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCGTTCTGGGGCAGGTTTaGTGTGTGTCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPVLGQV*CVSLLG
Trigger: GCCCAGAAGTGACACACACCAAACCTGCCCCAGAAC...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCGTTCCAGAGCGGGTTTaGACTTGGGCACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPVPERV*TWALLD
Trigger: GTCCAGAAGTGCCCAAGTCCAAACCCGCTCTGGAAC...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCTCTCTGGGCGTGGCGTaGTTTTATGTTTGGGACGTG +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPSLGVA*FYVWDV
Trigger: CACGTCCCAAACATAAAACCACGCCACGCCCAGAGA...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGGCGGGGGCGACGACCTaGTCTTTTGGTCTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGAGATT*SFGLSW
Trigger: CCACGAAAGACCAAAAGACCAGGTCGTCGCCCCCGC...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGTAGCCAGTTTAGTTTaGGGTACTTCTGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEVASLV*GTSGWG
Trigger: GCCCCATCCAGAAGTACCTCAAACTAAACTGGCTAC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGGAACCAGTTTGGTTTaGGGAACCTCAGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEGTSLV*GTSGLG
Trigger: ACCAAGTCCTGAGGTTCCTCAAACCAAACTGGTTCC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGAATGATGCTGGTGGGTaGCTCGCAACCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKNDAGG*LATLEL
Trigger: CAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATT...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCCCAGCTGCAGAGGTTTaGGAGAACGAGTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPPAAEV*ENEFYL
Trigger: CAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGG...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp TGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTACCTGAACATGACTGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGA +
Preference number: 4 (lower is better)
Translates to: CQPPAAEVCENEFYLNMTVPTTS*RGLRER
Trigger: TCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCAC...AGTCATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR GCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGAGCTCGGTGTCAGAGTaGCAACCACCAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGSSVSE*QPPAAE
Trigger: CTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCT...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGGAAGTACTGGTTTGGTGATACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTCGGTGTCAGAGTaGCAACCACCAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKYWFGDTLLPYPRRRPSSSVSE*QPPAAE
Trigger: CTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCT...TGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTCAGGTTTGGTTCTTaGCGGTTTGGGCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFRFGS*RFGPGA
Trigger: CGCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTGGTTCTTTCAGGTTTaGTTCTTGGCGGTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEWFFQV*FLAVWA
Trigger: GGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTTCTGTGGTGGGCTaGTGGCATTCCCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGSVVG*WHSPLW
Trigger: CCACAGAGGGGAATGCCACCAGCCCACCACAGAACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGCGGGGGCGACGACCTaGTCTTTTGGTCTTTCGTGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIAGATT*SFGLSW
Trigger: CCACGAAAGACCAAAAGACCAGGTCGTCGCCCCCGC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAACCTCGCATGGGGAATaGTGCTGGTGGGTGCCTCGC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSATSHGE*CWWVPR
Trigger: GCGAGGCACCCACCAGCATCATTCCCCATGCGAGGT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR GCA 90 bp TCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTACCTGAACAACTGGAGAGCATGTTaGATTTGCCACCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: SECQPPAAEVCENEFYLNNWRAC*ICHLAW
Trigger: CCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTT...GTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGCTCGGTGTCAGAGTaGCAACCACCAGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISSVSE*QPPAAE
Trigger: CTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTAAGTCTAGTTTGGTCTaGAGTGTCTCTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSKSSLV*SVSGRG
Trigger: GCCACGCCCAGAGACACTGCAGACCAAACTAGACTT...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTATTTGCCACCTCGCATaGGGAATGATGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSICHLA*GMMLVG
Trigger: ACCCACCAGCATCATTCCCCATGCGAGGTGGCAAAT...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp AAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTELGVRVPTTSCRGLRELVVLM*TLRFGL
Trigger: AAGGCCAAACCTCAAAGTCCACATCAATACCACAAG...TTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CCA 90 bp CCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTCAAGCTTTACATTTaGACTTGGACGCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: PSSVSECQPPAAEVCENEFKLYI*TWTQEL
Trigger: AAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAA...CTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGCTTTTGACTTGGAGGTaGAGCAGGTCGCACAACTAT +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYELLTWR*SRSHNY
Trigger: ATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAG...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCCTTGGGACATATGCTaGCACTGTGTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAPWDIC*HCVVLV
Trigger: GACCAAGACCACACAGTGCCAGCATATGTCCCAAGG...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGGGTGGCAAGGGTaGGCGGCGAGTCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSGWQG*AASPWL
Trigger: AAGCCAGGGACTCGCCGCCCACCCTTGCCACCCAGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTGTGTAGGTCTGGGTaGCAAGGGTGGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVCRSG*QGWAAS
Trigger: ACTCGCCGCCCACCCTTGCCACCCAGACCTACACAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGGTGGGTTCTGTGGTaGGCTGGTGGCATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGWVLW*AGGIPL
Trigger: GAGGGGAATGCCACCAGCCCACCACAGAACCCACCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGTGGGTGGGTTCTGTaGTGGGCTGGTGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGGWVL*WAGGIP
Trigger: GGGAATGCCACCAGCCCACCACAGAACCCACCCACC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCAGGTGCTTCAGGACGTaGTGTGGTTTTTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPRCFRT*CGFCSE
Trigger: CTCAGAACAAAAACCACACCACGTCCTGAAGCACCT...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGACGGATTTAGTTGGTaGCATGTCTGGTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEDGFSW*HVWFCC
Trigger: ACAGCAGAACCAGACATGCCACCAACTAAATCCGTC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCGCTCAATGTCTGTGGTaGGAACTATGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPAQCLW*ELWSLR
Trigger: CCTCAATGACCATAGTTCCCACCACAGACATTGAGC...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGCAGGCTCAATGTCTGTaGTGGGAACTATGGTCATTG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEQAQCL*WELWSL
Trigger: CAATGACCATAGTTCCCACCACAGACATTGAGCCTG...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTCCAAGATGACAAATaGGGGGCACCCTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVQDDK*GAPFHG
Trigger: ACCGTGGAAGGGTGCCCCTCATTTGTCATCTTGGAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTAACTGGTCAGAAGTaGGTTGCTGCCCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVTGQK*VAAQCV
Trigger: GACGCACTGGGCAGCAACTCACTTCTGACCAGTTAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGAGCAGGTTCAGTCTaGGGCTCATCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGAGSV*GSSGLG
Trigger: ACCCAGCCCAGATGAGCCTCAGACTGAACCTGCTCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTACTTGGAGCCAGTGTTaGCCTTGGCTGTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIATWSQC*PWLFKS
Trigger: ACTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGT...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAGGGAAGGGTGTTTTTaGCTCAGGAAATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEREGCF*LRKFWK
Trigger: CTTCCAGAATTTCCTGAGGCAAAAACACCCTTCCCT...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAAGGTTTGGTCTCAGGTaGCTGAGGGCTCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQRFGLR*LRARCS
Trigger: ACTACACCGAGCCCTCAGGCACCTGAGACCAAACCT...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTTGGCATGTCTGGTTCTaGTGTGGTTTGGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSWHVWF*CGLGFR
Trigger: CCTAAACCCCAAACCACAGCAGAACCAGACATGCCA...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTTTTATTGGGACAGCCTaGCAGGGTTCAGGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAFIGTA*QGSGSL
Trigger: CAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAA...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGGTGTGTGTCACTTCTaGGCTGAGAGGGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSGVCHF*AERDFR
Trigger: CCTAAAATCCCTCTCAGCCCAGAAGTGACACACACC...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTGGGTGGCAAGGGTaGGCGGCGAGTCCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSGWQG*AASPWL
Trigger: AAGCCAGGGACTCGCCGCCCACCCTTGCCACCCAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGTGTAGGTCTGGGTaGCAAGGGTGGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVCRSG*QGWAAS
Trigger: ACTCGCCGCCCACCCTTGCCACCCAGACCTACACAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGTTCTGTGGTGGGCTaGTGGCATTCCCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGSVVG*WHSPLW
Trigger: CCACAGAGGGGAATGCCACCAGCCCACCACAGAACC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTCTGCAGTGTCTCTaGGCGTGGCGTGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGLQCL*AWRGFM
Trigger: CATAAAACCACGCCACGCCCAGAGACACTGCAGACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCTCCTCTGGCCAGAGTaGTGCTTTGGCAGTGGGATA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARILLWPE*CFGSGI
Trigger: TATCCCACTGCCAAAGCACCACTCTGGCCAGAGGAG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTTCTGGGGCAGGTTTaGTGTGTGTCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVLGQV*CVSLLG
Trigger: GCCCAGAAGTGACACACACCAAACCTGCCCCAGAAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTGGACTTGGGCACTTCTaGACTAGGTGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAGLGHF*TRCGFR
Trigger: CCTAAAACCACACCTAGTCCAGAAGTGCCCAAGTCC...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTTTTGAGGCAGTTGTaGGCACCAAGGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQVLRQL*APRAPV
Trigger: AACCGGAGCCCTTGGTGCCCACAACTGCCTCAAAAC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCAGCTTCAGTTTCAAATaGAACAGGCTCAGAGACGGA +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPSFSFK*NRLRDG
Trigger: TCCGTCTCTGAGCCTGTTCCATTTGAAACTGAAGCT...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTCTGTGGTGGGAACTATaGTCATTGAGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSLWWEL*SLRELQ
Trigger: CTGAAGCTCCCTCAATGACCATAGTTCCCACCACAG...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR CAA 72 bp CTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTaGCGAGAACGAGTTTTACCTGAACATGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LGVRVPTTSCRG*RERVLPEHDFF
Trigger: AAAGAAGTCATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGAGCAGGTTCGCTCTaGGAGACCTCAGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGAGSL*ETSGYG
Trigger: ACCATACCCTGAGGTCTCTCAGAGCGAACCTGCTCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCCATGGCTTTTCACTTaGAGCCAATGTGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIPWLFT*SQCAPR
Trigger: CCTAGGGGCACATTGGCTTCAAGTGAAAAGCCATGG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGAGCAGGTTCAGTCTaGGGCTCATCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGAGSV*GSSGLG
Trigger: ACCCAGCCCAGATGAGCCTCAGACTGAACCTGCTCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTGGTCTCAGGTGCCTaGGGGCTCGGTGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARILVSGA*GLGVVL
Trigger: TAAAACTACACCGAGCCCTCAGGCACCTGAGACCAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAATTGGTCTCAGGTGCCTaGGGGCTCGGTGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQLVSGA*GLGVVL
Trigger: TAAAACTACACCGAGCCCTCAGGCACCTGAGACCAA...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAATGATGCTGGTGGGTaGCTCGCAACCCTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSANDAGG*LATLEL
Trigger: CAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR GCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGAACTGGAGAGCATGTTaGATTTGCCACCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKNWRAC*ICHLAW
Trigger: CCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTT...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp AGAGGGAAGTACTGGTTTGGTGATACATTGCTGCCATATCCCAGGAGAAGACCTCCAGCTGCAGAGGTTTaGGAGAACGAGTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: RGKYWFGDTLLPYPRRRPPAAEV*ENEFYL
Trigger: CAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGG...AGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR GCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGGCAGGTGTCGTAGGCTaGATTTCTGGACTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGAGVVG*ISGLVK
Trigger: CTTTACCAGTCCAGAAATGCAGCCTACGACACCTGC...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGATGGCCTGGGTGCTTaGTTGACCCCAGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSADGLGA*LTPGLM
Trigger: CATCAGACCTGGGGTCAAGCAAGCACCCAGGCCATC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAAGTCTAGTTTGGTCTaGAGTGTCTCTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIKSSLV*SVSGRG
Trigger: GCCACGCCCAGAGACACTGCAGACCAAACTAGACTT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATTTGCCACCTCGCATaGGGAATGATGCTGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIICHLA*GMMLVG
Trigger: ACCCACCAGCATCATTCCCCATGCGAGGTGGCAAAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCAGGTTTGGTTCTTaGCGGTTTGGGCCGGGGGCG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFRFGS*RFGPGA
Trigger: CGCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGCGGCGAGTCCCTaGCTTTTTAGTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSWAASP*LFSGVG
Trigger: ACCCACCCCACTAAAAAGCCAGGGACTCGCCGCCCA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTGTGTAGGTCTGGGTaGCAAGGGTGGGCGGCGAGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVCRSG*QGWAAS
Trigger: ACTCGCCGCCCACCCTTGCCACCCAGACCTACACAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGTTCTGTGGTGGGCTaGTGGCATTCCCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGSVVG*WHSPLW
Trigger: CCACAGAGGGGAATGCCACCAGCCCACCACAGAACC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGTGGGTTCTGTGGTaGGCTGGTGGCATTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGWVLW*AGGIPL
Trigger: GAGGGGAATGCCACCAGCCCACCACAGAACCCACCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTGGGTGGGTTCTGTaGTGGGCTGGTGGCATTCCC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGGWVL*WAGGIP
Trigger: GGGAATGCCACCAGCCCACCACAGAACCCACCCACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGTGAGGTTGGTGGGTaGGTTCTGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASEVGG*VLWWAG
Trigger: ACCAGCCCACCACAGAACCCACCCACCAACCTCACT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGATCAGGCACACAAGTaGCTCCAAGCCATGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQDQAHK*LQAMFS
Trigger: GGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp ACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGACCTTTTATTTGCTTTTaGCAATTTCTGTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: TELGVRVPTTSCRGLRERPFICF*QFLCIS
Trigger: GGAAATGCACAGAAATTGCCAAAAGCAAATAAAAGG...TCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGGAACATGACTTCTTTTaGCTTGGAGGTGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGEHDFF*LGGGAG
Trigger: ACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTC...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGATTCTTGGGCGTGGTaGTGTTTTTGGCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIDSWAW*CFWLRR
Trigger: CCTCCTAAGCCAAAAACATCACCACGCCCAAGAATC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGAGCAGGTTCGCTCTaGGAGACCTCAGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGAGSL*ETSGYG
Trigger: ACCATACCCTGAGGTCTCTCAGAGCGAACCTGCTCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGTAGGCCTGGGTGTTaGCCTCAGGGGTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSRPGC*PQGWCS
Trigger: ACTACACCACCCCTGAGGTCAACACCCAGGCCTACT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTCCAAGATGACAAATaGGGGGCACCCTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVQDDK*GAPFHG
Trigger: ACCGTGGAAGGGTGCCCCTCATTTGTCATCTTGGAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTCCCAGTCCAAGATaGCAAATGAGGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFPSPR*QMRGTL
Trigger: AAGGGTGCCCCTCATTTGTCATCTTGGACTGGGAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGCTGCTGTTGTCCCTaGAGCCTCAGTTCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISCCCP*SLSSKN
Trigger: GTTCTTAGAACTGAGGCTTCAGGGACAACAGCAGCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTACGACGAGTTCGTTGTaGTGTTTTAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIATTSSL*CFRSLC
Trigger: ACACAAGCTCCTAAAACATCACAACGAACTCGTCGT...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTTTGGAGCTTCAGTTCTaGGAGTACCAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIALELQF*EYQVQD
Trigger: ATCTTGAACCTGGTACTCTCAGAACTGAAGCTCCAA...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGAGCATGTTGCATTTaGCACCTCGCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRACCI*HLAWGM
Trigger: CATTCCCCATGCGAGGTGGCAAATGCAACATGCTCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAAGAGCATGTTGCATTTaGCACCTCGCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQRACCI*HLAWGM
Trigger: CATTCCCCATGCGAGGTGGCAAATGCAACATGCTCT...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVPTTS*RGLRER
Trigger: TCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGA +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPVPTTS*RGLRER
Trigger: TCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCAC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTACTTGGAGCCAGTGTTaGCCTTGGCTGTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARITWSQC*PWLFKS
Trigger: ACTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGAGCACGTGGTGTCTaGTTGGGAGCAGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGARGV*LGAGSV
Trigger: GACTGAACCTGCTCCCAAGCAGACACCACGTGCTCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGGTTTGGTCTCAGGTaGCTGAGGGCTCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARFGLR*LRARCS
Trigger: ACTACACCGAGCCCTCAGGCACCTGAGACCAAACCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAATGGTTTGGATTCAGGTaGTTCAGGACGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQWFGFR*FRTWCG
Trigger: ACCACACCACGTCCTGAAGCACCTGAATCCAAACCA...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTTTTTGGAGCTAGAGTaGTCAGTGGCAATTCAAACT +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEFLELE*SVAIQT
Trigger: AGTTTGAATTGCCACTGAGCACTCTAGCTCCAAAAA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGAGGCTGAATTTGAGGTaGATCTGGTCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKRLNLR*IWSVCG
Trigger: ACCACACACAGACCAGATGCACCTCAAATTCAGCCT...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCCGTGTTCTTGTTCGTTaGGATGTTTTTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPRVLVR*DVFGAN
Trigger: ATTAGCTCCAAAAACATCGCAACGAACAAGAACACG...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAGRGKY*FGDTLL
Trigger: CAGCAATGTATCACCAAACCAGTACTTCCCTCTTCC...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp ACTTGGAGGTGGAGCAGGTCGCACAACTATCAGATATTTCGGCTCTGCATCAACGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: TWRWSRSHNYQIFRLCINGRGKY*FGDTLL
Trigger: CAGCAATGTATCACCAAACCAGTACTTCCCTCTTCC...GTTGATGCAGAGCCGAAATATCTGATAGTTGTGCGACCTGCTCCACCTCCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGAAATGGTGTTTCACTTaGAGCCAGTGTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGKWCFT*SQCCPW
Trigger: CCAAGGGCAACACTGGCTCCAAGTGAAACACCATTT...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGGTTCTTTCAGGTTTaGTTCTTGGCGGTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIWFFQV*FLAVWA
Trigger: GGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTGTGTGTCACTTCTaGGCTGAGAGGGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGVCHF*AERDFR
Trigger: CCTAAAATCCCTCTCAGCCCAGAAGTGACACACACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTTAGGAGGAGCACGTaGTGTCTGCTTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLRRST*CLLGSR
Trigger: CCTGCTCCCAAGCAGACACCACGTGCTCCTCCTAAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGTGAGGTTGGTGGGTaGGTTCTGTGGTGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSEVGG*VLWWAG
Trigger: ACCAGCCCACCACAGAACCCACCCACCAACCTCACT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCCACTCCATTCCCACTaGGCATCCCACTGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSPLHSH*ASHWVW
Trigger: CCAAACCCAGTGGGATGCCCAGTGGGAATGGAGTGG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTCCGTTGTGATGTTTTaGAAGCTAATGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DQAHKWLQAMFSWIALYESVVMF*KLMLLR
Trigger: CCTCAACAACATTAGCTTCCAAAACATCACAACGGA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGACTTGGGCACTTCTaGACTAGGTGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGLGHF*TRCGFR
Trigger: CCTAAAACCACACCTAGTCCAGAAGTGCCCAAGTCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSAPVVS*QVPERV
Trigger: AACCCGCTCTGGAACCTGCCACGATACAACCGGAGC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLAPVVS*QVPERV
Trigger: AACCCGCTCTGGAACCTGCCACGATACAACCGGAGC...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGCAAGCCATGTTCTCCTaGATAGCTCTGTACGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGQAMFS*IALYEK
Trigger: CTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTG...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTGGGTAGAGTCCACTaGTACATTTCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVGRVH*YISIST
Trigger: GGTGCTGATAGAAATGTATCAGTGGACTCTACCCAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGTAGGCCTGGGTGTTaGCCTCAGGGGTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSRPGC*PQGWCS
Trigger: ACTACACCACCCCTGAGGTCAACACCCAGGCCTACT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGGATGTATCGCACATaGGGTCCTTTGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIWMYRT*GPLNLG
Trigger: GCCAAGATTCAAAGGACCTCATGTGCGATACATCCA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTCCAAGATGACAAATaGGGGGCACCCTTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVQDDK*GAPFHG
Trigger: ACCGTGGAAGGGTGCCCCTCATTTGTCATCTTGGAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCACAAACTGGCAGTaGTCTTCTCCATGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSTNWQ*SSPWPL
Trigger: GAGGGGCCATGGAGAAGATCACTGCCAGTTTGTGGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTAACTGGTCAGAAGTaGGTTGCTGCCCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVTGQK*VAAQCV
Trigger: GACGCACTGGGCAGCAACTCACTTCTGACCAGTTAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAAGGTCCTTTCAGAATaGCTGCAACAGTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIKVLSE*LQQCSK
Trigger: CTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTCCATGGCTTTTCACTTaGAGCCAATGTGCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPPWLFT*SQCAPR
Trigger: CCTAGGGGCACATTGGCTTCAAGTGAAAAGCCATGG...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGATGGCAGTAGAGTCTaGGGTTCTGGGGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSDGSRV*GSGAGL
Trigger: CAAACCTGCCCCAGAACCTCAGACTCTACTGCCATC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTTTGTTTTGGTGGTTTTaGACCAGGCTGAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIALFWWF*TRLNLR
Trigger: CCTCAAATTCAGCCTGGTTCAAAACCACCAAAACAA...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGGTTTGGTGATACATTaGTGCCATATCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKGLVIH*CHIPGE
Trigger: TTCTCCTGGGATATGGCAGCAATGTATCACCAAACC...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGCCAACCACCAGCTaGAGAGGTTTGCGAGAACGA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVPTTS*RGLRER
Trigger: TCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAGCACGTGGTGTCTaGTTGGGAGCAGGTTTGGTG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGARGV*LGAGLV
Trigger: CACCAAACCTGCTCCCAAGCAGACACCACGTGCTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGATGGCCTGGGTGCTTaGTTGACCCCAGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLDGLGA*LTPGLM
Trigger: CATCAGACCTGGGGTCAAGCAAGCACCCAGGCCATC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000495591.5
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTCAGAAGTGAGTTGCTaGCCAGTGCGTCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISEVSC*PVRPSK
Trigger: TTTAGATGGACGCACTGGGCAGCAACTCACTTCTGA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGATGGCCTGGGTGCTTaGTTGACCCCTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLDGLGA*LTPVPT
Trigger: AGTGGGAACAGGGGTCAAGCAAGCACCCAGGCCATC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAGCACGTGGTGTCTaGTTGGGAGCAGGTTCAGTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGARGV*LGAGSV
Trigger: GACTGAACCTGCTCCCAAGCAGACACCACGTGCTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGTTTGGTCTCAGGTaGCTGAGGGCTCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRFGLR*LRARCS
Trigger: ACTACACCGAGCCCTCAGGCACCTGAGACCAAACCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTAGACACCCCAAACTaGAGAGCATGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVDTPN*RACCIC
Trigger: GCAAATGCAACATGCTCTCCAGTTTGGGGTGTCTAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTAGACACCCCAAACTaGAGAGCATGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQVDTPN*RACCIC
Trigger: GCAAATGCAACATGCTCTCCAGTTTGGGGTGTCTAC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGCAATGTCCAGTCATaGTGTGGGTTGATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGNVQS*CGLMRK
Trigger: TTTCCTCATCAACCCACACCATGACTGGACATTGCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATTGGGACAGTGACTTaGCAATGTCCAGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIIGTVT*QCPVMV
Trigger: CACCATGACTGGACATTGCCAAGTCACTGTCCCAAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAATTGGGACAGTGACTTaGCAATGTCCAGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQIGTVT*QCPVMV
Trigger: CACCATGACTGGACATTGCCAAGTCACTGTCCCAAT...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACCTTGGGACATATGCTaGCACTGTGTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAPWDIC*HCVVLV
Trigger: GACCAAGACCACACAGTGCCAGCATATGTCCCAAGG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGCGTAGGCTGCATTTCTaGACTGGTAAAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGRRLHF*TGKDFQ
Trigger: CTGGAAATCTTTACCAGTCCAGAAATGCAGCCTACG...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTTAGGAGGAGCACGTaGTGTCTGCTTGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLRRST*CLLGSR
Trigger: CCTGCTCCCAAGCAGACACCACGTGCTCCTCCTAAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGGCACCTTAGGAACTaGTTGTGTTTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGHLRN*LCLWDS
Trigger: AGAATCCCACAAACACAACCAGTTCCTAAGGTGCCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGAGACCTCAGGGTATaGTTTATGAGGAAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRDLRV*FMRKEH
Trigger: GTGCTCCTTCCTCATAAACCATACCCTGAGGTCTCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGCTTTTTAGTGGGGTaGGTAGAGTCCACTGATACA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGFLVG*VESTDT
Trigger: TGTATCAGTGGACTCTACCCACCCCACTAAAAAGCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCTCTGGGCGTGGCGTaGTTTTATGTTTGGGACGTG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASLGVA*FYVWDV
Trigger: CACGTCCCAAACATAAAACCACGCCACGCCCAGAGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTCAGTGTCTCTGGGCGTaGCGTGGTTTTATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPQCLWA*RGFMFG
Trigger: CCCAAACATAAAACCACGCCACGCCCAGAGACACTG...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGTCTGCAGTGTCTCTaGGCGTGGCGTGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGLQCL*AWRGFM
Trigger: CATAAAACCACGCCACGCCCAGAGACACTGCAGACC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTTGGCTGGTGCTATaGTCTCCTTTGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFWLVL*SPLVTQ
Trigger: CTGAGTCACCAAAGGAGACCATAGCACCAGCCAAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGCCAGAGTGGTGCTTTaGCAGTGGGATATACATAGT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIARVVL*QWDIHS
Trigger: ACTATGTATATCCCACTGCCAAAGCACCACTCTGGC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTCTGGGGCAGGTTTaGTGTGTGTCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVLGQV*CVSLLG
Trigger: GCCCAGAAGTGACACACACCAAACCTGCCCCAGAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTATGTTGTTGAAGGTTTaGTTCCTGGTGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSMLLKV*FLVFQV
Trigger: GACCTGAAACACCAGGAACCAAACCTTCAACAACAT...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTCCAGAGCGGGTTTaGACTTGGGCACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVPERV*TWALLD
Trigger: GTCCAGAAGTGCCCAAGTCCAAACCCGCTCTGGAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTTTGAGGCAGTTGTaGGCACCAAGGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVLRQL*APRAPV
Trigger: AACCGGAGCCCTTGGTGCCCACAACTGCCTCAAAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGCTCAATGTCTGTGGTaGGAACTATGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIAQCLW*ELWSLR
Trigger: CCTCAATGACCATAGTTCCCACCACAGACATTGAGC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTCGTTGAGGCACTTTaGGAGCTGCTGTTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFVEAL*ELLLSL
Trigger: CAGGGACAACAGCAGCTCCCAAAGTGCCTCAACGAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQEVLVW*YIAAIS
Trigger: GGATATGGCAGCAATGTATCACCAAACCAGTACTTC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATTTCTATCAGCACCTaGTGGCCTGGGTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAISIST*WPGCLL
Trigger: AAGCAAGCACCCAGGCCATCAGGTGCTGATAGAAAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGGGCCTGATGAAATaGTTCCTGCACTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALGLMK*FLHFLA
Trigger: AGCCAGGAAGTGCAGGAATCATTTCATCAGGCCCAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTACTTGTTCTTCCCACTaGATGACCCATTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARITCSSH*MTHFLW
Trigger: CCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCCACAAACTGGCAGTaGTCTTCTCCATGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSTNWQ*SSPWPL
Trigger: GAGGGGCCATGGAGAAGATCACTGCCAGTTTGTGGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTAACTGGTCAGAAGTaGGTTGCTGCCCAGTGCGTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVTGQK*VAAQCV
Trigger: GACGCACTGGGCAGCAACTCACTTCTGACCAGTTAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGAACCAGTTCAGTCTaGAGCTCTTCGGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGTSSV*SSSGLS
Trigger: ACTGAGTCCCGAAGAGCTTCAGACTGAACTGGTTCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGAGCATCAGTACTATaGACAACAGGTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGASVL*TTGSKP
Trigger: AGGCTTTGAACCTGTTGTTCATAGTACTGATGCTCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTTACCCGATTTGTTCTaGGGTACTTCAGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKLPDLF*GTSGLD
Trigger: ATCAAGTCCTGAAGTACCTCAGAACAAATCGGGTAA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAACTGGAGAGCATGTTaGATTTGCCACCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSANWRAC*ICHLAW
Trigger: CCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTTTGGTGATACATTaGTGCCATATCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGLVIH*CHIPGE
Trigger: TTCTCCTGGGATATGGCAGCAATGTATCACCAAACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAGGTGTCGTAGGCTaGATTTCTGGACTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAAGVVG*ISGLVK
Trigger: CTTTACCAGTCCAGAAATGCAGCCTACGACACCTGC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGGATAGATGTAGTTTaGTGGGGAGCAGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGIDVV*WGAGVV
Trigger: TACGACACCTGCTCCCCAGCAAACTACATCTATCCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGGGATAGATGTAGTTTaGTGGGGAGCAGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAGIDVV*WGAGVV
Trigger: TACGACACCTGCTCCCCAGCAAACTACATCTATCCC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTCAGAAGTGAGTTaGTGCCCAGTGCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSWSEVS*CPVRPS
Trigger: AGATGGACGCACTGGGCAGCAACTCACTTCTGACCA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTCTGGCCAGAGTGGTaGTTTGGCAGTGGGATATAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLWPEW*FGSGIY
Trigger: GTATATCCCACTGCCAAAGCACCACTCTGGCCAGAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATGGTTTGGATTCAGGTaGTTCAGGACGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAWFGFR*FRTWCG
Trigger: ACCACACCACGTCCTGAAGCACCTGAATCCAAACCA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGRGKY*FGDTLL
Trigger: CAGCAATGTATCACCAAACCAGTACTTCCCTCTTCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTATCACTCCTCCCAGTaGAGCTTTTTCTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIYHSSQ*SFFWGF
Trigger: AAATCCCCAGAAAAAGCTCCACTGGGAGGAGTGATA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCGTAGGCTGCATTTCTaGACTGGTAAAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRRLHF*TGKDFQ
Trigger: CTGGAAATCTTTACCAGTCCAGAAATGCAGCCTACG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAATAGATGTAGTTTGCTaGGGAGCAGGTGTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAIDVVC*GAGVVG
Trigger: GCCTACGACACCTGCTCCCCAGCAAACTACATCTAT...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATGGTTCTTTCAGGTTTaGTTCTTGGCGGTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAWFFQV*FLAVWA
Trigger: GGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTGTTCCGGCACTTGTaGTTCTTTCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARILFRHL*FFQVWF
Trigger: GAACCAAACCTGAAAGAACCACAAGTGCCGGAACAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGCTTGGGAGCAGGTTTaGTGTGTGTCACTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLAWEQV*CVSLLG
Trigger: GCCCAGAAGTGACACACACCAAACCTGCTCCCAAGC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACGTGGTGTCTGCTTaGGAGCAGGTTTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHVVSA*EQVWCV
Trigger: CACACACCAAACCTGCTCCCAAGCAGACACCACGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTTGCAGTAACACGCTaGGGCACCTTAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFAVTR*GTLGTG
Trigger: ACCAGTTCCTAAGGTGCCCCAGCGTGTTACTGCAAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCTGTTTCTTCCAGAGTaGTCTGTAGTTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARILFLPE*SVVPLD
Trigger: GTCAAGAGGAACTACAGACCACTCTGGAAGAAACAG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGGTCCTTTGAATCTTaGCTTCCCAAGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRSFES*LPKRIS
Trigger: ACTGATCCTCTTGGGAAGCCAAGATTCAAAGGACCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTCTGGGCGTGGCGTaGTTTTATGTTTGGGACGTG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSLGVA*FYVWDV
Trigger: CACGTCCCAAACATAAAACCACGCCACGCCCAGAGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCAGTGTCTCTGGGCGTaGCGTGGTTTTATGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSQCLWA*RGFMFG
Trigger: CCCAAACATAAAACCACGCCACGCCCAGAGACACTG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGTCCAAAGTCTAGTTTaGTCTGCAGTGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAVQSLV*SAVSLG
Trigger: GCCCAGAGACACTGCAGACCAAACTAGACTTTGGAC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTCCTCTGGCCAGAGTaGTGCTTTGGCAGTGGGATA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLLWPE*CFGSGI
Trigger: TATCCCACTGCCAAAGCACCACTCTGGCCAGAGGAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACGTGGTGTCTGCTTaGGAGCAGGTTCAGTCTGAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHVVSA*EQVQSE
Trigger: CTCAGACTGAACCTGCTCCCAAGCAGACACCACGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGAATTTGAGGTGCATCTaGTCTGTGTGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGNLRCI*SVCGFR
Trigger: CCTAAAACCACACACAGACCAGATGCACCTCAAATT...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGCTTCAGTTTCAAATaGAACAGGCTCAGAGACGGA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISFSFK*NRLRDG
Trigger: TCCGTCTCTGAGCCTGTTCCATTTGAAACTGAAGCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCTAATG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSAPVVS*QVPELM
Trigger: CATTAGCTCTGGAACCTGCCACGATACAACCGGAGC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495591.5
3UTR CAA 72 bp ATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGACTaGGACGCAAGAACTTCAAGAGGATGGAGTCACTTG +
Preference number: 4 (lower is better)
Translates to: IPGEDLQALHLD*DARTSRGWSHL
Trigger: CAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
3UTR CAA 72 bp TGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTaGGACTTGGACGCAAGAACTTCAAGAGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: CHIPGEDLQALH*DLDARTSRGWS
Trigger: ACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGTTCTGGGGATTTAGCTaGATCCTTGTGAGTAACATT +
Preference number: 4 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGFWGFS*ILVSNI
Trigger: AATGTTACTCACAAGGATTCAGCTAAATCCCCAGAA...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGATTCTTGGGCGTGGTaGTGTTTTTGGCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSDSWAW*CFWLRR
Trigger: CCTCCTAAGCCAAAAACATCACCACGCCCAAGAATC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTCTGTAGTTCCTCTTaGCTAGGACTTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVCSSS*LGLGEI
Trigger: GATTTCCCCAAGTCCTAGTCAAGAGGAACTACAGAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTCCTGGCTTTCCAGTaGCATTATTTGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFLAFQ*HYLVVK
Trigger: CTTTACCACCAAATAATGTCACTGGAAAGCCAGGAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGGCCTGATGAAATaGTTCCTGCACTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLGLMK*FLHFLA
Trigger: AGCCAGGAAGTGCAGGAATCATTTCATCAGGCCCAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCCCAGTCCAAGATaGCAAATGAGGGGCACCCTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFPSPR*QMRGTL
Trigger: AAGGGTGCCCCTCATTTGTCATCTTGGACTGGGAAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTGGTCTCAGGTGCCTaGGGGCTCGGTGTAGTTTTA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLVSGA*GLGVVL
Trigger: TAAAACTACACCGAGCCCTCAGGCACCTGAGACCAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTAGGTACTTCAGGACTTaGTGTAGTTTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPRYFRT*CSFGSG
Trigger: CCCAGACCCAAAACTACATCAAGTCCTGAAGTACCT...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGAACAGGTTCGCTCTaGGAGACCTCAGGGTATGGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRTGSL*ETSGYG
Trigger: ACCATACCCTGAGGTCTCTCAGAGCGAACCTGTTCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAACTGGAGAGCATGTTaGATTTGCCACCTCGCATGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSNWRAC*ICHLAW
Trigger: CCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGTGATACATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGAGGTTTGGTGATACATTaGTGCCATATCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GDTLLPYPRRRPSSFTFGGLVIH*CHIPGE
Trigger: TTCTCCTGGGATATGGCAGCAATGTATCACCAAACC...TCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATGTATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCCAGCTGCAGAGGTTTaGGAGAACGAGTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSPAAEV*ENEFYL
Trigger: CAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGTCAGAAGTGAGTTaGTGCCCAGTGCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLWSEVS*CPVRPS
Trigger: AGATGGACGCACTGGGCAGCAACTCACTTCTGACCA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAAGTCTAGTTTGGTCTaGAGTGTCTCTGGGCGTGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLKSSLV*SVSGRG
Trigger: GCCACGCCCAGAGACACTGCAGACCAAACTAGACTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTTTGGATTCAGGTaGTTCAGGACGTGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSWFGFR*FRTWCG
Trigger: ACCACACCACGTCCTGAAGCACCTGAATCCAAACCA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTAGACACCCCAAACTaGAGAGCATGTTGCATTTGC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVDTPN*RACCIC
Trigger: GCAAATGCAACATGCTCTCCAGTTTGGGGTGTCTAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTGGACTTTGAGGTTTaGCCTTTTACCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVDFEV*PFTFWQ
Trigger: TTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTGGACTTTGAGGTTTaGCCTTTTACCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQVDFEV*PFTFWQ
Trigger: TTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCAC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARILVVLM*TLRFGL
Trigger: AAGGCCAAACCTCAAAGTCCACATCAATACCACAAG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACTTTTGACTTGGAGGTaGAGCAGGTCGCACAACTAT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALLTWR*SRSHNY
Trigger: ATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGGCAATGTCCAGTCATaGTGTGGGTTGATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAGNVQS*CGLMRK
Trigger: TTTCCTCATCAACCCACACCATGACTGGACATTGCC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCTTGGGACATATGCTaGCACTGTGTGGTCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLPWDIC*HCVVLV
Trigger: GACCAAGACCACACAGTGCCAGCATATGTCCCAAGG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGCCAGTGTTGCCCTTaGCTGTTCAAGAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASQCCP*LFKSSR
Trigger: TCTAGAACTCTTGAACAGCCAAGGGCAACACTGGCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAAATGGTGTTTCACTTaGAGCCAGTGTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAKWCFT*SQCCPW
Trigger: CCAAGGGCAACACTGGCTCCAAGTGAAACACCATTT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATAGATGTAGTTTGCTaGGGAGCAGGTGTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSIDVVC*GAGVVG
Trigger: GCCTACGACACCTGCTCCCCAGCAAACTACATCTAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGTGTGTGTCACTTCTaGGCTGAGAGGGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGVCHF*AERDFR
Trigger: CCTAAAATCCCTCTCAGCCCAGAAGTGACACACACC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACTTTTGGAGCAGGTGTaGTGTATGACACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALLEQV*CMTLLD
Trigger: GTCCAGAAGTGTCATACACCACACCTGCTCCAAAAG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGAGACCTCAGGGTATaGTTTATGAGGAAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARDLRV*FMRKEH
Trigger: GTGCTCCTTCCTCATAAACCATACCCTGAGGTCTCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTCCAAAGTCTAGTTTaGTCTGCAGTGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVQSLV*SAVSLG
Trigger: GCCCAGAGACACTGCAGACCAAACTAGACTTTGGAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGTTTGAGGTACTTCTaGATGGGGCGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASLRYF*MGRGFR
Trigger: CCTAAAACCACGCCCCATCCAGAAGTACCTCAAACT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACAACTTCAGTCTTTaGCTCCTCTGGCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHNFSL*LLWPEW
Trigger: CCACTCTGGCCAGAGGAGCCAAAGACTGAAGTTGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTCCGCAGTAGGAACTaGTTTGGATTCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLRSRN*FGFRCF
Trigger: GAAGCACCTGAATCCAAACCAGTTCCTACTGCGGAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGCTCCGCAGTAGGAACTaGTTTGGATTCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLLRSRN*FGFRCF
Trigger: GAAGCACCTGAATCCAAACCAGTTCCTACTGCGGAG...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATGTTGTTGAAGGTTTaGTTCCTGGTGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIMLLKV*FLVFQV
Trigger: GACCTGAAACACCAGGAACCAAACCTTCAACAACAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTAGAGACGGATTTAGTTaGTGGCATGTCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPRDGFS*WHVWFC
Trigger: GCAGAACCAGACATGCCACCAACTAAATCCGTCTCT...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGTGGTGGGAACTATaGTCATTGAGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLWWEL*SLRELQ
Trigger: CTGAAGCTCCCTCAATGACCATAGTTCCCACCACAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp CATTGCTGCCATATCCCAGGAGAAGACCTTCAAGCTTTACATTTGGACTTGGACTGTTCTCTTCACACCTaGCTTCTTTCATTCAGCATC +
Preference number: 4 (lower is better)
Translates to: HCCHIPGEDLQALHLDLDCSLHT*LLSFSI
Trigger: GATGCTGAATGAAAGAAGCCAGGTGTGAAGAGAACA...GTCCAAGTCCAAATGTAAAGCTTGAAGGTCTTCTCCTGGGATATGGCAGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAEVLVW*YIAAIS
Trigger: GGATATGGCAGCAATGTATCACCAAACCAGTACTTC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAACATGACTTCTTTTaGCTTGGAGGTGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSEHDFF*LGGGAG
Trigger: ACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTGGCTGGACAGATTTaGAAAATCCACTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVAGQI*KIHFFS
Trigger: AGAAAAGAAGTGGATTTTTCAAATCTGTCCAGCCAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTCTGGGGATTTAGCTaGATCCTTGTGAGTAACATT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFWGFS*ILVSNI
Trigger: AATGTTACTCACAAGGATTCAGCTAAATCCCCAGAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGATTCTTGGGCGTGGTaGTGTTTTTGGCTTAGGAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLDSWAW*CFWLRR
Trigger: CCTCCTAAGCCAAAAACATCACCACGCCCAAGAATC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTCTGTAGTTCCTCTTaGCTAGGACTTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVCSSS*LGLGEI
Trigger: GATTTCCCCAAGTCCTAGTCAAGAGGAACTACAGAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATTTCTATCAGCACCTaGTGGCCTGGGTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLISIST*WPGCLL
Trigger: AAGCAAGCACCCAGGCCATCAGGTGCTGATAGAAAT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTGGGCCTGATGAAATaGTTCCTGCACTTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLGLMK*FLHFLA
Trigger: AGCCAGGAAGTGCAGGAATCATTTCATCAGGCCCAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGATGTATCGCACATaGGGTCCTTTGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSWMYRT*GPLNLG
Trigger: GCCAAGATTCAAAGGACCTCATGTGCGATACATCCA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAACTTGTTCTTCCCACTaGATGACCCATTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSATCSSH*MTHFLW
Trigger: CCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTTGTTGTTGTTGGAGCTaGAGATGTCCCAGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPCCCWS*RCPRSN
Trigger: ATTACTCCTGGGACATCTTCAGCTCCAACAACAACA...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTAGGGTTATAGATTaGGAAGGCAGAGGCGACGTT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGRVID*EGRGDV
Trigger: AACGTCGCCTCTGCCTTCTCAATCTATAACCCTACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTAGGGCGGGTTCTTTTTaGTGTTTTGGTAGCCAGTTT +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPRAGSF*CFGSQF
Trigger: AAACTGGCTACCAAAACATCAAAAAGAACCCGCCCT...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGGGAACTATGGTCATTaGGGGAGCTTCAGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPGNYGH*GSFSFK
Trigger: TTTGAAACTGAAGCTCCCTCAATGACCATAGTTCCC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAACCAGTTTAGTTTaGGGTACTTCTGGATGGGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGTSLV*GTSGWG
Trigger: GCCCCATCCAGAAGTACCTCAAACTAAACTGGTTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAACGACGAGTTCGTTGTaGTGTTTTAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSATTSSL*CFRSLC
Trigger: ACACAAGCTCCTAAAACATCACAACGAACTCGTCGT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAACCAGTTTGGTTTaGGGAACCTCAGGACTTGGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGTSLV*GTSGLG
Trigger: ACCAAGTCCTGAGGTTCCTCAAACCAAACTGGTTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGGAGCTTCAGTTCTaGGAGTACCAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALELQF*EYQVQD
Trigger: ATCTTGAACCTGGTACTCTCAGAACTGAAGCTCCAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGTACTTCAGGACTTaGTGTAGTTTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRYFRT*CSFGSG
Trigger: CCCAGACCCAAAACTACATCAAGTCCTGAAGTACCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGAGCATGTTGCATTTaGCACCTCGCATGGGGAATG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRACCI*HLAWGM
Trigger: CATTCCCCATGCGAGGTGGCAAATGCAACATGCTCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCAGCTGCAGAGGTTTaGGAGAACGAGTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLPAAEV*ENEFYL
Trigger: CAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTACTTGGAGCCAGTGTTaGCCTTGGCTGTTCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLTWSQC*PWLFKS
Trigger: ACTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGCAGGTGTCGTAGGCTaGATTTCTGGACTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLAGVVG*ISGLVK
Trigger: CTTTACCAGTCCAGAAATGCAGCCTACGACACCTGC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGATAGATGTAGTTTaGTGGGGAGCAGGTGTCGTA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGIDVV*WGAGVV
Trigger: TACGACACCTGCTCCCCAGCAAACTACATCTATCCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCAGAAGTGAGTTGCTaGCCAGTGCGTCCATCTAAA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSEVSC*PVRPSK
Trigger: TTTAGATGGACGCACTGGGCAGCAACTCACTTCTGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGTATTAGAATAGTTTaGAATGTTTCCGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQGIRIV*NVSGVL
Trigger: AAGGACCCCGGAAACATTGCAAACTATTCTAATACC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTTTGGAGCTAGAGTaGTCAGTGGCAATTCAAACT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFLELE*SVAIQT
Trigger: AGTTTGAATTGCCACTGAGCACTCTAGCTCCAAAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGCATGTCTGGTTCTaGTGTGGTTTGGGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLWHVWF*CGLGFR
Trigger: CCTAAACCCCAAACCACAGCAGAACCAGACATGCCA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTTCAAGCTTTACATTTaGACTTGGACGCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKFKLYI*TWTQEL
Trigger: AAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTTTTGACTTGGAGGTaGAGCAGGTCGCACAACTAT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLLTWR*SRSHNY
Trigger: ATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGCAATGTCCAGTCATaGTGTGGGTTGATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGNVQS*CGLMRK
Trigger: TTTCCTCATCAACCCACACCATGACTGGACATTGCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATTGGGACAGTGACTTaGCAATGTCCAGTCATGGTG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSIGTVT*QCPVMV
Trigger: CACCATGACTGGACATTGCCAAGTCACTGTCCCAAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTCTAGAAGTTTTAGGTaGGATAGAATCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKSRSFR*DRIQNT
Trigger: CGTATTCTGGATTCTATCCCACCTAAAACTTCTAGA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGCCAGTGTTGCCCTTaGCTGTTCAAGAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSQCCP*LFKSSR
Trigger: TCTAGAACTCTTGAACAGCCAAGGGCAACACTGGCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGAGCCAGTGTTGCCCTTaGCTGTTCAAGAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLSQCCP*LFKSSR
Trigger: TCTAGAACTCTTGAACAGCCAAGGGCAACACTGGCT...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAAATGGTGTTTCACTTaGAGCCAGTGTTGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSKWCFT*SQCCPW
Trigger: CCAAGGGCAACACTGGCTCCAAGTGAAACACCATTT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTTTGAGGAACAAATaGTGTTTCACTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFLRNK*CFTWSQ
Trigger: CTGGCTCCAAGTGAAACACCATTTGTTCCTCAAAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATAGATGTAGTTTGCTaGGGAGCAGGTGTCGTAGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLIDVVC*GAGVVG
Trigger: GCCTACGACACCTGCTCCCCAGCAAACTACATCTAT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTTTGTTCCGGCACTTGTaGTTCTTTCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPLFRHL*FFQVWF
Trigger: GAACCAAACCTGAAAGAACCACAAGTGCCGGAACAA...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTGTGTGTCACTTCTaGGCTGAGAGGGATTTTAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGVCHF*AERDFR
Trigger: CCTAAAATCCCTCTCAGCCCAGAAGTGACACACACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTGCAGTAACACGCTaGGGCACCTTAGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFAVTR*GTLGTG
Trigger: ACCAGTTCCTAAGGTGCCCCAGCGTGTTACTGCAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTTTTGGAGCAGGTGTaGTGTATGACACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLLEQV*CMTLLD
Trigger: GTCCAGAAGTGTCATACACCACACCTGCTCCAAAAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGGTCCTTTGAATCTTaGCTTCCCAAGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARSFES*LPKRIS
Trigger: ACTGATCCTCTTGGGAAGCCAAGATTCAAAGGACCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTTATGTTTGGGACGTaGACGACGTGTTCTTGTTCG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFMFGT*TTCSCS
Trigger: CGAACAAGAACACGTCGTCCACGTCCCAAACATAAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTCCAAAGTCTAGTTTaGTCTGCAGTGTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVQSLV*SAVSLG
Trigger: GCCCAGAGACACTGCAGACCAAACTAGACTTTGGAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGAGTTTGAGGTACTTCTaGATGGGGCGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLSLRYF*MGRGFR
Trigger: CCTAAAACCACGCCCCATCCAGAAGTACCTCAAACT...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGTTTGAGGTACTTCTaGATGGGGCGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSLRYF*MGRGFR
Trigger: CCTAAAACCACGCCCCATCCAGAAGTACCTCAAACT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTGGCTGGTGCTATaGTCTCCTTTGGTGACTCAG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFWLVL*SPLVTQ
Trigger: CTGAGTCACCAAAGGAGACCATAGCACCAGCCAAAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGTGCTTCAGGACGTaGTGTGGTTTTTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRCFRT*CGFCSE
Trigger: CTCAGAACAAAAACCACACCACGTCCTGAAGCACCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTCCGCAGTAGGAACTaGTTTGGATTCAGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLRSRN*FGFRCF
Trigger: GAAGCACCTGAATCCAAACCAGTTCCTACTGCGGAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGACGGATTTAGTTGGTaGCATGTCTGGTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSDGFSW*HVWFCC
Trigger: ACAGCAGAACCAGACATGCCACCAACTAAATCCGTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTCAGTTCTAAGAACTaGTTCGAGGATTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLSSKN*FEDCGR
Trigger: CCTGCCACAATCCTCGAACCAGTTCTTAGAACTGAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGCAAATGTTGTTCCTaGAGCATCAGTACTATGAAC +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARISKCCS*SISTMN
Trigger: GTTCATAGTACTGATGCTCCAGGAACAACATTTGCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGTCTTTAGGACTTTATTaGGACAGCCTGCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLSLGLY*DSLPGF
Trigger: GAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGA...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
3UTR CAA 72 bp GAGAACGAGTTTTACCTGAACATGACTTCTTTTGACTaGGAGGTGGAGCAGGTCGCACAACTATCAGATATT +
Preference number: 4 (lower is better)
Translates to: ENEFYLNMTSFD*EVEQVAQLSDI
Trigger: AATATCTGATAGTTGTGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCATGTTCAGGTAAAACTCGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAAGTACTGGTTTGGTaGTACATTGCTGCCATATCC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSEVLVW*YIAAIS
Trigger: GGATATGGCAGCAATGTATCACCAAACCAGTACTTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTCTGTAGTTCCTCTTaGCTAGGACTTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVCSSS*LGLGEI
Trigger: GATTTCCCCAAGTCCTAGTCAAGAGGAACTACAGAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTGGGTAGAGTCCACTaGTACATTTCTATCAGCACC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVGRVH*YISIST
Trigger: GGTGCTGATAGAAATGTATCAGTGGACTCTACCCAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTCTCTTGTTGGGCTTaGGCTAAAGTCAGTTATATT +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFSCWA*AKVSYI
Trigger: AATATAACTGACTTTAGCTCAAGCCCAACAAGAGAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGATGTATCGCACATaGGGTCCTTTGAATCTTGGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLWMYRT*GPLNLG
Trigger: GCCAAGATTCAAAGGACCTCATGTGCGATACATCCA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGTAAATCTTGTATCTaGGAGAGTTGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASKSCI*ESCTAA
Trigger: TGCAGCTGTGCAACTCTCTCAGATACAAGATTTACT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAACCACTGAACATAATTaGTTTGGGTGTGACCACCTA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSATTEHN*FGCDHL
Trigger: TAGGTGGTCACACCCAAATCAATTATGTTCAGTGGT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAAGGTCCTTTCAGAATaGCTGCAACAGTGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLKVLSE*LQQCSK
Trigger: CTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAAGATTGAAGCATGTTaGAAGGTAAGTACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARIKIEAC*KVSTGK
Trigger: TTTCCCTGTACTTACCTTTCAACATGCTTCAATCTT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTTGTTGTTGGAGCTaGAGATGTCCCAGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSCCCWS*RCPRSN
Trigger: ATTACTCCTGGGACATCTTCAGCTCCAACAACAACA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGTTTTGGTGGTTTTaGACCAGGCTGAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALFWWF*TRLNLR
Trigger: CCTCAAATTCAGCCTGGTTCAAAACCACCAAAACAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGGAACTATGGTCATTaGGGGAGCTTCAGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGNYGH*GSFSFK
Trigger: TTTGAAACTGAAGCTCCCTCAATGACCATAGTTCCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGTACTTCAGGACTTaGTGTAGTTTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRYFRT*CSFGSG
Trigger: CCCAGACCCAAAACTACATCAAGTCCTGAAGTACCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAACTGCTGTTGTCCCTaGAGCCTCAGTTCTAAGAAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLNCCCP*SLSSKN
Trigger: GTTCTTAGAACTGAGGCTTCAGGGACAACAGCAGTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495591.5
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGGTTCCTGGCGAACTaGTCTGAAATAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARFLAN*SEITFF
Trigger: AAAGAAGGTTATTTCAGAGCAGTTCGCCAGGAACCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCCTTTCAGAATGACTaGAACAGTGCAGCAAGGATT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASFQND*NSAARI
Trigger: AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGCTGAATTTGAGGTaGATCTGGTCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRLNLR*IWSVCG
Trigger: ACCACACACAGACCAGATGCACCTCAAATTCAGCCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTGGACTTTGAGGTTTaGCCTTTTACCTTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVDFEV*PFTFWQ
Trigger: TTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTCTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPLVVLM*TLRFGL
Trigger: AAGGCCAAACCTCAAAGTCCACATCAATACCACAAG...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGTATCACTCCTCCCAGTaGAGCTTTTTCTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLYHSSQ*SFFWGF
Trigger: AAATCCCCAGAAAAAGCTCCACTGGGAGGAGTGATA...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGTTCCGGCACTTGTaGTTCTTTCAGGTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLFRHL*FFQVWF
Trigger: GAACCAAACCTGAAAGAACCACAAGTGCCGGAACAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGCACCTTAGGAACTaGTTGTGTTTGTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGHLRN*LCLWDS
Trigger: AGAATCCCACAAACACAACCAGTTCCTAAGGTGCCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTTTTGGAGCAGGTGTaGTGTATGACACTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLLEQV*CMTLLD
Trigger: GTCCAGAAGTGTCATACACCACACCTGCTCCAAAAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGAGACCTCAGGGTATaGTTTATGAGGAAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRDLRV*FMRKEH
Trigger: GTGCTCCTTCCTCATAAACCATACCCTGAGGTCTCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGTTTCTTCCAGAGTaGTCTGTAGTTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLFLPE*SVVPLD
Trigger: GTCAAGAGGAACTACAGACCACTCTGGAAGAAACAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTTGTGAAAGGTTCTTaGGTGGATTGGTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVVKGS*VDWSVS
Trigger: AGAAACAGACCAATCCACCCAAGAACCTTTCACAAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGCTTTTTAGTGGGGTaGGTAGAGTCCACTGATACA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGFLVG*VESTDT
Trigger: TGTATCAGTGGACTCTACCCACCCCACTAAAAAGCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGTCCTTTGAATCTTaGCTTCCCAAGAGGATCAGT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRSFES*LPKRIS
Trigger: ACTGATCCTCTTGGGAAGCCAAGATTCAAAGGACCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCACCAAGCGGGTTTTTaGGTTTCACCTGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSHQAGF*VSPGIH
Trigger: ATGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCCTATTTCTCCAAATTaGACAGGTTCCTGGCGAACT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSPISPN*TGSWRT
Trigger: AGTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGTTTATGTTTGGGACGTaGACGACGTGTTCTTGTTCG +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLFMFGT*TTCSCS
Trigger: CGAACAAGAACACGTCGTCCACGTCCCAAACATAAA...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATAGTCTGTTTTGGCTaGTGCTATGGTCTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSIVCFG*CYGLLW
Trigger: CCAAAGGAGACCATAGCACCAGCCAAAACAGACTAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATACATAGTCTGTTTTaGCTGGTGCTATGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAIHSLF*LVLWSP
Trigger: AGGAGACCATAGCACCAGCCAAAACAGACTATGTAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGCCAGAGTGGTGCTTTaGCAGTGGGATATACATAGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLARVVL*QWDIHS
Trigger: ACTATGTATATCCCACTGCCAAAGCACCACTCTGGC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGTGCTTCAGGACGTaGTGTGGTTTTTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRCFRT*CGFCSE
Trigger: CTCAGAACAAAAACCACACCACGTCCTGAAGCACCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGACGGATTTAGTTGGTaGCATGTCTGGTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLDGFSW*HVWFCC
Trigger: ACAGCAGAACCAGACATGCCACCAACTAAATCCGTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGAGACGGATTTAGTTaGTGGCATGTCTGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRDGFS*WHVWFC
Trigger: GCAGAACCAGACATGCCACCAACTAAATCCGTCTCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGCTCAATGTCTGTGGTaGGAACTATGGTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLAQCLW*ELWSLR
Trigger: CCTCAATGACCATAGTTCCCACCACAGACATTGAGC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCAGGCTCAATGTCTGTaGTGGGAACTATGGTCATTG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLQAQCL*WELWSL
Trigger: CAATGACCATAGTTCCCACCACAGACATTGAGCCTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTCAGTTCTAAGAACTaGTTCGAGGATTGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLSSKN*FEDCGR
Trigger: CCTGCCACAATCCTCGAACCAGTTCTTAGAACTGAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGAGGGTTCAGGTTCCTTaGCTACTTAAGCCAAGGATT +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLRVQVP*LLKPRI
Trigger: AATCCTTGGCTTAAGTAGCCAAGGAACCTGAACCCT...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTGGCTGGACAGATTTaGAAAATCCACTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVAGQI*KIHFFS
Trigger: AGAAAAGAAGTGGATTTTTCAAATCTGTCCAGCCAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTCTGGGGATTTAGCTaGATCCTTGTGAGTAACATT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFWGFS*ILVSNI
Trigger: AATGTTACTCACAAGGATTCAGCTAAATCCCCAGAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCAGGGTATGGTTTATaGGGAAGGAGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSGYGL*GRSTSF
Trigger: AAAAGATGTGCTCCTTCCTCATAAACCATACCCTGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCCTGGCTTTCCAGTaGCATTATTTGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFLAFQ*HYLVVK
Trigger: CTTTACCACCAAATAATGTCACTGGAAAGCCAGGAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTACTTGTTCTTCCCACTaGATGACCCATTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLTCSSH*MTHFLW
Trigger: CCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGTAAATCTTGTATCTaGGAGAGTTGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSKSCI*ESCTAA
Trigger: TGCAGCTGTGCAACTCTCTCAGATACAAGATTTACT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTACCACTGAACATAATTaGTTTGGGTGTGACCACCTA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSTTEHN*FGCDHL
Trigger: TAGGTGGTCACACCCAAATCAATTATGTTCAGTGGT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGTTGTTGTTGGAGCTaGAGATGTCCCAGGAGTAAT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLCCCWS*RCPRSN
Trigger: ATTACTCCTGGGACATCTTCAGCTCCAACAACAACA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATGGTCTCCTTTGGTaGCTCAGTACTAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSYGLLW*LSTKCN
Trigger: GTTACACTTAGTACTGAGTCACCAAAGGAGACCATA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGAACTATGGTCATTaGGGGAGCTTCAGTTTCAAA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGNYGH*GSFSFK
Trigger: TTTGAAACTGAAGCTCCCTCAATGACCATAGTTCCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTACGACGAGTTCGTTGTaGTGTTTTAGGAGCTTGTGT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLTTSSL*CFRSLC
Trigger: ACACAAGCTCCTAAAACATCACAACGAACTCGTCGT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTGGAGCTTCAGTTCTaGGAGTACCAGGTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLELQF*EYQVQD
Trigger: ATCTTGAACCTGGTACTCTCAGAACTGAAGCTCCAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAAACCGATTTGTTCTaGGGTACTTCAGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSETDLF*GTSGLD
Trigger: ATCAAGTCCTGAAGTACCTCAGAACAAATCGGTTTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAGCATCAGTACTATaGACAACAGGTTCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGASVL*TTGSKP
Trigger: AGGCTTTGAACCTGTTGTTCATAGTACTGATGCTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGGGTTGGTAGAGCCTaGATAAAACTTAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGVGRA*IKLSDF
Trigger: AAAATCACTAAGTTTTATTCAGGCTCTACCAACCCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTTTGGTGATACATTaGTGCCATATCCCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGLVIH*CHIPGE
Trigger: TTCTCCTGGGATATGGCAGCAATGTATCACCAAACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGAAAACATCATAAGTTaGAGTTTGAGGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAENIIS*SLRLQN
Trigger: GTTCTGCAGCCTCAAACTGCAACTTATGATGTTTTC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGTTCCTGGCGAACTaGTCTGAAATAACCTTCTTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRFLAN*SEITFF
Trigger: AAAGAAGGTTATTTCAGAGCAGTTCGCCAGGAACCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGGAAGGGTGTTTTTaGCTCAGGAAATTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLREGCF*LRKFWK
Trigger: CTTCCAGAATTTCCTGAGGCAAAAACACCCTTCCCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR GCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACGTGTTCTTGTTCGTTaGGATGTTTTTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARVLVR*DVFGAN
Trigger: ATTAGCTCCAAAAACATCGCAACGAACAAGAACACG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGAAGAGGGAAGTACTaGTTTGGTGATACATTGCTG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGRGKY*FGDTLL
Trigger: CAGCAATGTATCACCAAACCAGTACTTCCCTCTTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAATTGTTTCAGTGGCTaGACAGATTTGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: GKYRERSFQNDCNSAARINCFSG*TDLKNP
Trigger: TGGATTTTTCAAATCTGTCCAGCCACTGAAACAATT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTATCACTCCTCCCAGTaGAGCTTTTTCTGGGGATTT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLYHSSQ*SFFWGF
Trigger: AAATCCCCAGAAAAAGCTCCACTGGGAGGAGTGATA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCATTTTTGAGGAACAAATaGTGTTTCACTTGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAFLRNK*CFTWSQ
Trigger: CTGGCTCCAAGTGAAACACCATTTGTTCCTCAAAAA...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCGTAGGCTGCATTTCTaGACTGGTAAAGATTTCCAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRRLHF*TGKDFQ
Trigger: CTGGAAATCTTTACCAGTCCAGAAATGCAGCCTACG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTGTGAAAGGTTCTTaGGTGGATTGGTCTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVVKGS*VDWSVS
Trigger: AGAAACAGACCAATCCACCCAAGAACCTTTCACAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACCAAGCGGGTTTTTaGGTTTCACCTGGAATTCAT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHQAGF*VSPGIH
Trigger: ATGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTTTGATTGGTAACTaGTCAGAAGTGAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSLIGN*SEVSCC
Trigger: GCAGCAACTCACTTCTGACCAGTTACCAATCAAAGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTATGTTTGGGACGTaGACGACGTGTTCTTGTTCG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFMFGT*TTCSCS
Trigger: CGAACAAGAACACGTCGTCCACGTCCCAAACATAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATACATAGTCTGTTTTaGCTGGTGCTATGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSIHSLF*LVLWSP
Trigger: AGGAGACCATAGCACCAGCCAAAACAGACTATGTAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATGTTGTTGAAGGTTTaGTTCCTGGTGTTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSMLLKV*FLVFQV
Trigger: GACCTGAAACACCAGGAACCAAACCTTCAACAACAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGCTTCAGTTTCAAATaGAACAGGCTCAGAGACGGA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSFSFK*NRLRDG
Trigger: TCCGTCTCTGAGCCTGTTCCATTTGAAACTGAAGCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTAGGTTTGGGATGTaGACGATGAGTTCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFRFGM*TMSSLR
Trigger: CCTCAACGAACTCATCGTCCACATCCCAAACCTAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAACGAATGTTGTCCCTaGAGCCTCTTTTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSNECCP*SLFYRR
Trigger: TCTCCTATAAAAGAGGCTCCAGGGACAACATTCGTT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGGTGGCTGGACAGATTTaGAAAATCCACTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLVAGQI*KIHFFS
Trigger: AGAAAAGAAGTGGATTTTTCAAATCTGTCCAGCCAC...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCAGGGTATGGTTTATaGGGAAGGAGCACATCTTTT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSGYGL*GRSTSF
Trigger: AAAAGATGTGCTCCTTCCTCATAAACCATACCCTGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCCTGGCTTTCCAGTaGCATTATTTGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFLAFQ*HYLVVK
Trigger: CTTTACCACCAAATAATGTCACTGGAAAGCCAGGAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTCTCTTGTTGGGCTTaGGCTAAAGTCAGTTATATT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFSCWA*AKVSYI
Trigger: AATATAACTGACTTTAGCTCAAGCCCAACAAGAGAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGTAAATCTTGTATCTaGGAGAGTTGCACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSKSCI*ESCTAA
Trigger: TGCAGCTGTGCAACTCTCTCAGATACAAGATTTACT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTATGGTCTCCTTTGGTaGCTCAGTACTAAGTGTAAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLYGLLW*LSTKCN
Trigger: GTTACACTTAGTACTGAGTCACCAAAGGAGACCATA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTGTTTTGGTGGTTTTaGACCAGGCTGAATTTGAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLFWWF*TRLNLR
Trigger: CCTCAAATTCAGCCTGGTTCAAAACCACCAAAACAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAAACCGATTTGTTCTaGGGTACTTCAGGACTTGAT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLETDLF*GTSGLD
Trigger: ATCAAGTCCTGAAGTACCTCAGAACAAATCGGTTTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTACATCAGAAACAGGTTaGCTTTCTGTCATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSTSETG*LSVISR
Trigger: CCTAGAAATGACAGAAAGTCAACCTGTTTCTGATGT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCCTTTCAGAATGACTaGAACAGTGCAGCAAGGATT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSFQND*NSAARI
Trigger: AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGTATTAGAATAGTTTaGAATGTTTCCGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGIRIV*NVSGVL
Trigger: AAGGACCCCGGAAACATTGCAAACTATTCTAATACC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTCAAGCTTTACATTTaGACTTGGACGCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFKLYI*TWTQEL
Trigger: AAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCTAGAAGTTTTAGGTaGGATAGAATCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASRSFR*DRIQNT
Trigger: CGTATTCTGGATTCTATCCCACCTAAAACTTCTAGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTTTGATTGGTAACTaGTCAGAAGTGAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSLIGN*SEVSCC
Trigger: GCAGCAACTCACTTCTGACCAGTTACCAATCAAAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCGTTGTGATGTTTTaGAAGCTAATGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSVVMF*KLMLLR
Trigger: CCTCAACAACATTAGCTTCCAAAACATCACAACGGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAATTTGAGGTGCATCTaGTCTGTGTGTGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLNLRCI*SVCGFR
Trigger: CCTAAAACCACACACAGACCAGATGCACCTCAAATT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAACGAATGTTGTCCCTaGAGCCTCTTTTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLNECCP*SLFYRR
Trigger: TCTCCTATAAAAGAGGCTCCAGGGACAACATTCGTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGCAAATGTTGTTCCTaGAGCATCAGTACTATGAAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSKCCS*SISTMN
Trigger: GTTCATAGTACTGATGCTCCAGGAACAACATTTGCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGCTATTGTTGTCTTTaGTGGCTCAAATCTAAAGGT +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASYCCL*WLKSKG
Trigger: ACCTTTAGATTTGAGCCACCAAAGACAACAATAGCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR TCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATACCATGTCCTTTTaGCATATTGTTTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSYTMSF*HIVCPY
Trigger: GTAAGGGCAAACAATATGTCAAAAGGACATGGTATA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGGGTAGTTACAACCTTTaGACTCTGTTACATATCTTG +
Preference number: 4 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLGSYNL*TLLHIL
Trigger: CAAGATATGTAACAGAGTTCAAAGGTTGTAACTACC...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAAAACATCATAAGTTaGAGTTTGAGGCTGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLENIIS*SLRLQN
Trigger: GTTCTGCAGCCTCAAACTGCAACTTATGATGTTTTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR GCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCGTGTTCTTGTTCGTTaGGATGTTTTTGGAGCTAAT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRVLVR*DVFGAN
Trigger: ATTAGCTCCAAAAACATCGCAACGAACAAGAACACG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCAAGCTTTACATTTaGACTTGGACGCAAGAACTT +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFKLYI*TWTQEL
Trigger: AAGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAAATTGTTTCAGTGGCTaGACAGATTTGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQANCFSG*TDLKNP
Trigger: TGGATTTTTCAAATCTGTCCAGCCACTGAAACAATT...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATTCATAAACTGTGTTaGGCTTTAGGTTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAIHKLC*ALGFPQ
Trigger: TTGTGGAAAACCTAAAGCCCAACACAGTTTATGAAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAATTCATAAACTGTGTTaGGCTTTAGGTTTTCCACAA +
Preference number: 4 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAIHKLC*ALGFPQ
Trigger: TTGTGGAAAACCTAAAGCCCAACACAGTTTATGAAT...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCCGTTGTGATGTTTTaGAAGCTAATGTTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSVVMF*KLMLLR
Trigger: CCTCAACAACATTAGCTTCCAAAACATCACAACGGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
3UTR CAA 72 bp GCAATCTCATCGTGCATTATCTTTTTGTGCTCAGACTaGACTTCACATTCAGTCTCTACATACAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: AISSCIIFLCSD*TSHSVSTYSLI
Trigger: AATCAAGCTGTATGTAGAGACTGAATGTGAAGTCAAGTCTGAGCACAAAAAGATAATGCACGATGAGATTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCTCTTGTTGGGCTTaGGCTAAAGTCAGTTATATT +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFSCWA*AKVSYI
Trigger: AATATAACTGACTTTAGCTCAAGCCCAACAAGAGAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTATACCATGTCCTTTTaGCATATTGTTTGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLYTMSF*HIVCPY
Trigger: GTAAGGGCAAACAATATGTCAAAAGGACATGGTATA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR TCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAAGATTGAAGCATGTTaGAAGGTAAGTACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLKIEAC*KVSTGK
Trigger: TTTCCCTGTACTTACCTTTCAACATGCTTCAATCTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTAGAAGTTTTAGGTaGGATAGAATCCAGAATACG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSRSFR*DRIQNT
Trigger: CGTATTCTGGATTCTATCCCACCTAAAACTTCTAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTATAGGAGAAACTaGTTCAAAGATTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFYRRN*FKDCSR
Trigger: CCTGCTACAATCTTTGAACCAGTTTCTCCTATAAAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CCA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATTGTTGTCTTTGGTaGCTCAAATCTAAAGGTAAC +
Preference number: 4 (lower is better)
Translates to: GSQLPQKCYSVNISILLSYCCLW*LKSKGN
Trigger: GTTACCTTTAGATTTGAGCCACCAAAGACAACAATA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CCA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTTATAGGAGAAACTaGTTCAAAGATTGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFYRRN*FKDCSR
Trigger: CCTGCTACAATCTTTGAACCAGTTTCTCCTATAAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS CCA 90 bp GCACCCTTCCACGGTGACCACAGTGAGGTTGGTGGGTGGGTTCTGTaGTGGGCTGGTGGCATTCCCCTCTGTGGCCTCCTCTTTGGGGAA +
Preference number: 5 (lower is better)
Translates to: APFHGDHSEVGGWVL*WAGGIPLCGLLFGE
Trigger: TTCCCCAAAGAGGAGGCCACAGAGGGGAATGCCACCAGCCCACCACAGAACCCACCCACCAACCTCACTGTGGTCACCGTGGAAGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS TCA 90 bp GTGCCTCGCAACCCTGGAGCTGCATTTAAGTGGACTGTCTCCCAGTaGCAGAGGCGGGCGGCTGCACTTAGCTGTGCCGTGGGCTTACTC +
Preference number: 5 (lower is better)
Translates to: VPRNPGAAFKWTVSQ*QRRAAALSCAVGLL
Trigger: GAGTAAGCCCACGGCACAGCTAAGTGCAGCCGCCCGCCTCTGTCACTGGGAGACAGTCCACTTAAATGCAGCTCCAGGGTTGCGAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS TCA 90 bp CCCCAAACTGGAGAGCATGTTGCATTTGCCACCTCGCATGGGGAATaGTGCTGGTGGGTGCCTCGCAACCCTGGAGCTGCATTTAAGTGG +
Preference number: 5 (lower is better)
Translates to: PQTGEHVAFATSHGE*CWWVPRNPGAAFKW
Trigger: CCACTTAAATGCAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000486770.7
ENST00000530539.2
CDS GCA 90 bp AGCATGTTGCATTTGCCACCTCGCATGGGGAATGATGCTGGTGGGTaGCTCGCAACCCTGGAGCTGCATTTAAGTGGACTGTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: SMLHLPPRMGNDAGG*LATLELHLSGLSPS
Trigger: ACTGGGAGACAGTCCACTTAAATGCAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATTCCCCATGCGAGGTGGCAAATGCAACATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000530539.2
CDS-3UTR CAA 90 bp CCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGGAGGGAAGTACTGGTTaGGTGATACATTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: PSSVSECQPPAAEVCENEEGSTG*VIHCCH
Trigger: ATGGCAGCAATGTATCACCAAACCAGTACTTCCCTC...CTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGATGGTTTTGAGGCAGTaGTGGGCACCAAGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEMVLRQ*WAPRAP
Trigger: CGGAGCCCTTGGTGCCCACAACTGCCTCAAAACCAT...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS TCA 90 bp GGGCACCTTAGGAACTGGTTGTGTTTGTGGGATTCTTGGGCGTGGTaGTGTTTTTGGCTTAGGAGGAGCACGTGGTGTCTGCTTGGGAGC +
Preference number: 5 (lower is better)
Translates to: GHLRNWLCLWDSWAW*CFWLRRSTWCLLGS
Trigger: GCTCCCAAGCAGACACCACGTGCTCCTCCTAAGCCAAAAACATCACCACGCCCAAGAATCCCACAAACACAACCAGTTCCTAAGGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000284322.10
ENST00000466947.5
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000478235.5
ENST00000482765.5
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
ENST00000527943.5
CDS-3UTR CAA 90 bp GACAGGAAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGTGGTTTGGTGATACATaGCTGCCATATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: DRKTELGVRVPTTSCRGLWFGDT*LPYPRR
Trigger: TCTCCTGGGATATGGCAGCAATGTATCACCAAACCA...CAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGCAGTCATGGTGTGGGTaGATGAGGAAACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEQSWCG*MRKPQD
Trigger: GTCCTGGGGTTTCCTCATCAACCCACACCATGACTG...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTTTTCAGGTTTGGTTCTaGGCGGTTTGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAFQVWF*AVWAGG
Trigger: GCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAAA...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSHQGLR*YRGRFQ
Trigger: CTGGAACCTGCCACGATACAACCGGAGCCCTTGGTG...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGTTGGTTCTTGGCGGTTaGGGCCGGGGGCGTCGTTTA +
Preference number: 5 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGLVLGG*GRGRRL
Trigger: TAAACGACGCCCCCGGCCCAAACCGCCAAGAACCAA...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGCCTGGGTGCTTGCTaGACCCCTGTTCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGLGAC*TPVPTP
Trigger: TGGAGTGGGAACAGGGGTCAAGCAAGCACCCAGGCC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS CCA 90 bp AAATCTGTCATTGGGACAGTGACTTGGCAATGTCCAGTCATGGTGTaGGTTGATGAGGAAACCCCAGGACAGGAAGACCGAGCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: KSVIGTVTWQCPVMV*VDEETPGQEDRARC
Trigger: ACACCGAGCTCGGTCTTCCTGTCCTGGGGTTTCCTCATCAACCCACACCATGACTGGACATTGCCAAGTCACTGTCCCAATGACAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000527258.5
ENST00000530539.2
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTGGTTCTTGGCGGTTaGGGCCGGGGGCGTCGTTTA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILVLGG*GRGRRL
Trigger: TAAACGACGCCCCCGGCCCAAACCGCCAAGAACCAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTCAGGTTTGGTTCTaGGCGGTTTGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFQVWF*AVWAGG
Trigger: GCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGGTTTCCGGGGTCCTTTaGCTGAGAACCAGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: DQAHKWLQAMFSWIALYEVSGVL*LRTSVV
Trigger: AACAACACTGGTTCTCAGCAAAAGGACCCCGGAAAC...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ACTTGGAGGTGGAGCAGGTCGCACAACTATCAGATATTTCGGCTCTGCATCAACGAGAGCATGTTGCATTaGCCACCTCGCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: TWRWSRSHNYQIFRLCINESMLH*PPRMGN
Trigger: ATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTC...GTTGATGCAGAGCCGAAATATCTGATAGTTGTGCGACCTGCTCCACCTCCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTGTGGTTCTTTCAGGTTaGGTTCTTGGCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAVVLSG*VLGGLG
Trigger: GCCCAAACCGCCAAGAACCAAACCTGAAAGAACCAC...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGAGAGCGGGTTTGGACTaGGGCACTTCTGGACTAGGT +
Preference number: 5 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGRAGLD*GTSGLG
Trigger: ACCTAGTCCAGAAGTGCCCAAGTCCAAACCCGCTCT...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTTCCAGAGCGGGTTaGGACTTGGGCACTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGSRAG*DLGTSG
Trigger: TCCAGAAGTGCCCAAGTCCAAACCCGCTCTGGAACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGTTCCAGAGCGGGTTaGGACTTGGGCACTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQGSRAG*DLGTSG
Trigger: TCCAGAAGTGCCCAAGTCCAAACCCGCTCTGGAACC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp CTTGGAGGTGGAGCAGGTCGCACAACTATCAGATATTTCGGCTCTGCATCAACTATGACTTCTTTTGACTaGGAGGTGGAGCAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: LGGGAGRTTIRYFGSASTMTSFD*EVEQVA
Trigger: TGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCAT...AGTTGATGCAGAGCCGAAATATCTGATAGTTGTGCGACCTGCTCCACCTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCAGTCATGGTGTGGGTaGATGAGGAAACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIQSWCG*MRKPQD
Trigger: GTCCTGGGGTTTCCTCATCAACCCACACCATGACTG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCATTGGGACAGTGACTaGGCAATGTCCAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAHWDSD*AMSSHG
Trigger: ACCATGACTGGACATTGCCAAGTCACTGTCCCAATG...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCACTTGGAGCCAGTGTaGCCCTTGGCTGTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIHLEPV*PLAVQE
Trigger: CTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGTG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGGTTCTTGGCGGTTaGGGCCGGGGGCGTCGTTTA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALVLGG*GRGRRL
Trigger: TAAACGACGCCCCCGGCCCAAACCGCCAAGAACCAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGCTTGGGAGCAGGTTaGGTGTGTGTCACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARICLGAG*VCVTSG
Trigger: CCCAGAAGTGACACACACCAAACCTGCTCCCAAGCA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTCTGATGTGTGGCTaGTCAGATGTTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGLMCG*SDVLGL
Trigger: GAGGCCCAGAACATCTGACAAGCCACACATCAGACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGGCCTGGGTGCTTGCTaGACCCCAGGTCTGATGTGT +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAGLGAC*TPGLMC
Trigger: ACACATCAGACCTGGGGTCAAGCAAGCACCCAGGCC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTCTGTGGCCTCCTCTTaGGGGAACCGTTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARISVASS*GNRLTE
Trigger: CTCTGTCAAACGGTTCCCCAAAGAGGAGGCCACAGA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCTGGCTCACTCACTCTaGGGTCCGCTGATTCAGTAC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILAHSL*GPLIQY
Trigger: GTACTGAATCAGCGGACCCAAGAGTGAGTGAGCCAG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGGTCCAAAGTCTAGTTaGGTCTGCAGTGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKGPKSS*VCSVSG
Trigger: CCCAGAGACACTGCAGACCAAACTAGACTTTGGACC...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGCAGTAGGAACTGGTTaGGATTCAGGTGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSAVGTG*DSGASG
Trigger: TCCTGAAGCACCTGAATCCAAACCAGTTCCTACTGC...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGACTTGATGTAGTTTaGGGTCTGGGACGGGGACGA +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQGLDVV*GLGRGR
Trigger: TCGTCCCCGTCCCAGACCCAAAACTACATCAAGTCC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGGAAGACCGAGCTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGTTCAGTCCTTTTATTaGCTTTTGGCAATTTCTGTG +
Preference number: 5 (lower is better)
Translates to: RKTELGVRVPTTSCRGLRVQSFY*LLAISV
Trigger: CACAGAAATTGCCAAAAGCAAATAAAAGGACTGAAC...TCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAGCTCGGTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS CCA 90 bp GGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACCTGAAAAGGCCCTGAGCCAG +
Preference number: 5 (lower is better)
Translates to: GRKNFKRMESLVVLM*TLRFGLLPEKALSQ
Trigger: CTGGCTCAGGGCCTTTTCAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532144.1
CDS-3UTR CAA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPESLVV*MWTLRF
Trigger: AAACCTCAAAGTCCACATCAATACCACAAGTGACTC...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCCTTCAAGCTTTACATTaGGACTTGGACGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPLQALH*DLDART
Trigger: AGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAG...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGAAGTACTGGTTTGGTGATACATTGCTGCCATATCCCAGGAGAAGACCTACCAGCTGCAGAGGTTaGCGAGAACGAGTTTTACCT +
Preference number: 5 (lower is better)
Translates to: RGKYWFGDTLLPYPRRRPTSCRG*RERVLP
Trigger: AGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGT...AGGTCTTCTCCTGGGATATGGCAGCAATGTATCACCAAACCAGTACTTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTTGGCACTGTGTGGTCTaGGTCATAGGTACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSWHCVV*VIGTLD
Trigger: ATCCAAAGTACCTATGACCAAGACCACACAGTGCCA...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAAGGGATAGATGTAGTTaGCTGGGGAGCAGGTGTCGT +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQRDRCS*LGSRCR
Trigger: ACGACACCTGCTCCCCAGCAAACTACATCTATCCCT...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCAGGTTTGGTTCTaGGCGGTTTGGGCCGGGGGC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFQVWF*AVWAGG
Trigger: GCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTGGTTCTTTCAGGTTaGGTTCTTGGCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVVLSG*VLGGLG
Trigger: GCCCAAACCGCCAAGAACCAAACCTGAAAGAACCAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCACGTGGTGTCTGCTaGGGAGCAGGTTTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAARGVC*GAGLVC
Trigger: ACACACCAAACCTGCTCCCAAGCAGACACCACGTGC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGGAACTGGTTGTGTTaGTGGGATTCTTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRNWLC*WDSWAW
Trigger: CCACGCCCAAGAATCCCACAAACACAACCAGTTCCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACTGGTCAGAAGTGAGTaGCTGCCCAGTGCGTCCATC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALVRSE*LPSASI
Trigger: GATGGACGCACTGGGCAGCAACTCACTTCTGACCAG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGGTCCAAAGTCTAGTTaGGTCTGCAGTGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIGPKSS*VCSVSG
Trigger: CCCAGAGACACTGCAGACCAAACTAGACTTTGGACC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGGTTCTGGGGCAGGTTaGGTGTGTGTCACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAGSGAG*VCVTSG
Trigger: CCCAGAAGTGACACACACCAAACCTGCCCCAGAACC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSHQGLR*YRGRFQ
Trigger: CTGGAACCTGCCACGATACAACCGGAGCCCTTGGTG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATGGTTTTGAGGCAGTaGTGGGCACCAAGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAMVLRQ*WAPRAP
Trigger: CGGAGCCCTTGGTGCCCACAACTGCCTCAAAACCAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTTTCTTTAGGACTTTATaGGGACAGCCTGCCAGGGTT +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSFFRTL*GQPARV
Trigger: AACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAA...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGTTGCTTTTGGAAGATTaGGCCACACTAGCTAGAACA +
Preference number: 5 (lower is better)
Translates to: DQAHKWLQAMFSWIALYELLLED*ATLART
Trigger: TGTTCTAGCTAGTGTGGCCAAATCTTCCAAAAGCAA...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAAACTGGAGAGCATGTaGCATTTGCCACCTCGCATG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIKLESM*HLPPRM
Trigger: CATGCGAGGTGGCAAATGCAACATGCTCTCCAGTTT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACAGTCATGGTGTGGGTaGATGAGGAAACCCCAGGAC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAQSWCG*MRKPQD
Trigger: GTCCTGGGGTTTCCTCATCAACCCACACCATGACTG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTTTCAGGAGTCACTGTaGTGGGTCGTGCTGAGATTT +
Preference number: 5 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKFQESL*WVVLRF
Trigger: AAATCTCAGCACGACCCACAACAGTGACTCCTGAAA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCGAATACGATCACTTGTaGCTGTGTAGGAATCTGATA +
Preference number: 5 (lower is better)
Translates to: WLQAMFSWIALYEKQLLPEYDHL*LCRNLI
Trigger: TATCAGATTCCTACACAGCAACAAGTGATCGTATTC...GGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTCACTTGGAGCCAGTGTaGCCCTTGGCTGTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPHLEPV*PLAVQE
Trigger: CTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGTG...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCAAATGGTGTTTCACTaGGAGCCAGTGTTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIQMVFH*EPVLPL
Trigger: CAAGGGCAACACTGGCTCCAAGTGAAACACCATTTG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAACAAATGGTGTTTCACTaGGAGCCAGTGTTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQQMVFH*EPVLPL
Trigger: CAAGGGCAACACTGGCTCCAAGTGAAACACCATTTG...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGAAGGAGCACATCTTTaGGAGCAGGTGTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIEGAHL*EQVWCM
Trigger: CATACACCACACCTGCTCCAAAAGATGTGCTCCTTC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGTGTGGCGCCTGAGTaGTCTTTGCTAGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARICVAPE*SLLVQL
Trigger: CAACTGAACTAGCAAAGACAACTCAGGCGCCACACA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGCCTGGGTGCTTGCTaGACCCCAGGTCTGATGTGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGLGAC*TPGLMC
Trigger: ACACATCAGACCTGGGGTCAAGCAAGCACCCAGGCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGGTCAGAAGTGAGTaGCTGCCCAGTGCGTCCATC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLVRSE*LPSASI
Trigger: GATGGACGCACTGGGCAGCAACTCACTTCTGACCAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTAAGGGAAGGGTGTTTTaGCCTCAGGAAATTCTGGAA +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSKGRVF*PQEILE
Trigger: TTCCAGAATTTCCTGAGGCAAAAACACCCTTCCCTT...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGGTAGCCAGTTTAGTTaGAGGTACTTCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQGSQFS*RYFWMG
Trigger: CCCCATCCAGAAGTACCTCAAACTAAACTGGCTACC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAACGACGACCTGGTCTTTaGGTCTTTCGTGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQRRPGL*VFRGAN
Trigger: ATTAGCACCACGAAAGACCAAAAGACCAGGTCGTCG...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHQGLR*YRGRFQ
Trigger: CTGGAACCTGCCACGATACAACCGGAGCCCTTGGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATGGTTTTGAGGCAGTaGTGGGCACCAAGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSMVLRQ*WAPRAP
Trigger: CGGAGCCCTTGGTGCCCACAACTGCCTCAAAACCAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATGGACGATGAGTTCGTaGAGGCACTTTGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAWTMSS*RHFGSC
Trigger: GCAGCTCCCAAAGTGCCTCAACGAACTCATCGTCCA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGGAACCAGTTTGGTTaGAGGAACCTCAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRNQFG*RNLRTW
Trigger: CCAAGTCCTGAGGTTCCTCAAACCAAACTGGTTCCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGTACGAGCTGTACGAGAAGCAGTaGCTACCCATGTTAAATAAT +
Preference number: 5 (lower is better)
Translates to: DQAHKWLQAMFSWIALYELYEKQ*LPMLNN
Trigger: ATTATTTAACATGGGTAGCAACTGCTTCTCGTACAG...CTCGTACAGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp CTCGGTGTCAGAGTGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTAGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACAT +
Preference number: 5 (lower is better)
Translates to: LGVRVPTTSCRGLRERVLVLMWT*RFGLLH
Trigger: ATGTAAAAGGCCAAACCTCAAAGTCCACATCAATAC...TAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCACTCTGACACCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS GCA 90 bp AATAGATTCCACAACTTCAGTCTTTGGCTCCTCTGGCCAGAGTGGTaGTTTGGCAGTGGGATATACATAGTCTGTTTTGGCTGGTGCTAT +
Preference number: 5 (lower is better)
Translates to: NRFHNFSLWLLWPEW*FGSGIYIVCFGWCY
Trigger: ATAGCACCAGCCAAAACAGACTATGTATATCCCACTGCCAAAGCACCACTCTGGCCAGAGGAGCCAAAGACTGAAGTTGTGGAATCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471714.6
ENST00000482765.5
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGAGAGCATGTTGCATTaGCCACCTCGCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPESMLH*PPRMGN
Trigger: ATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TGCCAACCACCAGCTGCAGAGGTTTGCGAGAACGAGTTTTACCTGAACATGACTGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: CQPPAAEVCENEFYLNMTESLVV*MWTLRF
Trigger: AAACCTCAAAGTCCACATCAATACCACAAGTGACTC...AGTCATGTTCAGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGTGGTTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GACTTGGAGGTGGAGCAGGTCGCACAACTATCAGATATTTCGGCTCTGCATCAACTTCAAGCTTTACATTaGGACTTGGACGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: DLEVEQVAQLSDISALHQLQALH*DLDART
Trigger: AGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAG...TTGATGCAGAGCCGAAATATCTGATAGTTGTGCGACCTGCTCCACCTCCAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGAGGGAAGTACTGGTTaGGTGATACATTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIEGSTG*VIHCCH
Trigger: ATGGCAGCAATGTATCACCAAACCAGTACTTCCCTC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGAGGGAAGTACTGGTTaGGTGATACATTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQEGSTG*VIHCCH
Trigger: ATGGCAGCAATGTATCACCAAACCAGTACTTCCCTC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGGCACTGTGTGGTCTaGGTCATAGGTACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIWHCVV*VIGTLD
Trigger: ATCCAAAGTACCTATGACCAAGACCACACAGTGCCA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTGGGATTAGTTTCCTaGGGACATATGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILGLVS*GHMLAL
Trigger: CAGTGCCAGCATATGTCCCAAGGAAACTAATCCCAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTCAGGAGTCACTGTaGTGGGTCGTGCTGAGATTT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFQESL*WVVLRF
Trigger: AAATCTCAGCACGACCCACAACAGTGACTCCTGAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTATCATAAGTTGCAGTTaGAGGCTGCAGAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSIISCS*RLQNFG
Trigger: TCCAAAGTTCTGCAGCCTCAAACTGCAACTTATGAT...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTGGTTCTTTCAGGTTaGGTTCTTGGCGGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVVLSG*VLGGLG
Trigger: GCCCAAACCGCCAAGAACCAAACCTGAAAGAACCAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCACCTTAGGAACTGGTaGTGTTTGTGGGATTCTTGG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIHLRNW*CLWDSW
Trigger: CCAAGAATCCCACAAACACAACCAGTTCCTAAGGTG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGGTTCTTGGGTGGATaGGTCTGTTTCTTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIRFLGG*VCFFQS
Trigger: ACTCTGGAAGAAACAGACCAATCCACCCAAGAACCT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGTCTGATGTGTGGCTaGTCAGATGTTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGLMCG*SDVLGL
Trigger: GAGGCCCAGAACATCTGACAAGCCACACATCAGACC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTCTTTGGGGAACCGTTaGACAGAGTCAGTAATGGAG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARISLGNR*TESVME
Trigger: CTCCATTACTGACTCTGTCAAACGGTTCCCCAAAGA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGTGGCCTCCTCTTaGGGGAACCGTTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSVASS*GNRLTE
Trigger: CTCTGTCAAACGGTTCCCCAAAGAGGAGGCCACAGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGGCTCACTCACTCTaGGGTCCGCTGATTCAGTAC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLAHSL*GPLIQY
Trigger: GTACTGAATCAGCGGACCCAAGAGTGAGTGAGCCAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGGTCAGAAGTGAGTaGCTGCCCAGTGCGTCCATC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLVRSE*LPSASI
Trigger: GATGGACGCACTGGGCAGCAACTCACTTCTGACCAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp TTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTCTGGGTTCTTTTTGTTGTaGTTGTTGGAGCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: FRRSGTQVAPSHVLLDSSGFFLL*LLELKM
Trigger: CATCTTCAGCTCCAACAACAACAACAAAAAGAACCC...AGAGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCCACAACTTCAGTCTTaGGCTCCTCTGGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSPQLQS*APLARV
Trigger: CACTCTGGCCAGAGGAGCCAAAGACTGAAGTTGTGG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTGTCCGTTGTGATGTTTaGGAAGCTAATGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAVRCDV*EANVVE
Trigger: CTCAACAACATTAGCTTCCAAAACATCACAACGGAC...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATTCTGGAAGGCTTTTaGGAGCTAGAGTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIILEGF*ELECSV
Trigger: CACTGAGCACTCTAGCTCCAAAAAGCCTTCCAGAAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTTCTGGGGCAGGTTaGGTGTGTGTCACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGSGAG*VCVTSG
Trigger: CCCAGAAGTGACACACACCAAACCTGCCCCAGAACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGTCTCTCAGATGGTTTaGAGGCAGTTGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAVSQMV*RQLWAP
Trigger: TGGTGCCCACAACTGCCTCAAAACCATCTGAGAGAC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTGGGAACTATGGTCATaGAGGGAGCTTCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKWELWS*RELQFQ
Trigger: TTGAAACTGAAGCTCCCTCAATGACCATAGTTCCCA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAGAGCATGTTGCATTaGCCACCTCGCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSESMLH*PPRMGN
Trigger: ATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAATGACTTCTTTTGACTaGGAGGTGGAGCAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAMTSFD*EVEQVA
Trigger: TGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCAT...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTATTCCACCTTCCACATaGTCTTTCACTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAIPPST*SFTPNS
Trigger: TGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAAT...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACTTGGAGCCAGTGTaGCCCTTGGCTGTTCAAGAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHLEPV*PLAVQE
Trigger: CTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGGATAGATGTAGTTaGCTGGGGAGCAGGTGTCGT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRDRCS*LGSRCR
Trigger: ACGACACCTGCTCCCCAGCAAACTACATCTATCCCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGAACTGGTTGTGTTaGTGGGATTCTTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRNWLC*WDSWAW
Trigger: CCACGCCCAAGAATCCCACAAACACAACCAGTTCCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAGTTGTGAAAGGTTCTaGGGTGGATTGGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARISCERF*GGLVCF
Trigger: GAAACAGACCAATCCACCCAAGAACCTTTCACAACT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATGTGTGGCGCCTGAGTaGTCTTTGCTAGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSACVAPE*SLLVQL
Trigger: CAACTGAACTAGCAAAGACAACTCAGGCGCCACACA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTCTGATGTGTGGCTaGTCAGATGTTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGLMCG*SDVLGL
Trigger: GAGGCCCAGAACATCTGACAAGCCACACATCAGACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTGTGGCCTCCTCTTaGGGGAACCGTTTGACAGAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSVASS*GNRLTE
Trigger: CTCTGTCAAACGGTTCCCCAAAGAGGAGGCCACAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGGCTCACTCACTCTaGGGTCCGCTGATTCAGTAC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLAHSL*GPLIQY
Trigger: GTACTGAATCAGCGGACCCAAGAGTGAGTGAGCCAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGCATCCCACTGGGTTaGGGCCTAGTAGGTCTTGTA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGIPLG*GLVGLV
Trigger: TACAAGACCTACTAGGCCCAAACCCAGTGGGATGCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCACAACTTCAGTCTTaGGCTCCTCTGGCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLPQLQS*APLARV
Trigger: CACTCTGGCCAGAGGAGCCAAAGACTGAAGTTGTGG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACTGAGTGTAACAGGTTaGAGCTCCGCAGTAGGAACT +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQALSVTG*SSAVGT
Trigger: AGTTCCTACTGCGGAGCTCAAACCTGTTACACTCAG...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGAGCGGGTTTGGACTaGGGCACTTCTGGACTAGGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRAGLD*GTSGLG
Trigger: ACCTAGTCCAGAAGTGCCCAAGTCCAAACCCGCTCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTCTCTCAGATGGTTTaGAGGCAGTTGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVSQMV*RQLWAP
Trigger: TGGTGCCCACAACTGCCTCAAAACCATCTGAGAGAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp CATTTAGGAGATCAGGCACACAAGTGGCTCCAAGCCATGTTCTCCTGGATAGCTATTGTTTTGGTGGTTTaGAACCAGGCTGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: HLGDQAHKWLQAMFSWIAIVLVV*NQAEFE
Trigger: CTCAAATTCAGCCTGGTTCAAAACCACCAAAACAAT...AGCTATCCAGGAGAACATGGCTTGGAGCCACTTGTGTGCCTGATCTCCTAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTGGGAACTATGGTCATaGAGGGAGCTTCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIWELWS*RELQFQ
Trigger: TTGAAACTGAAGCTCCCTCAATGACCATAGTTCCCA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGTTCGTTGCGATGTTTTaGGAGCTAATGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGFVAMF*ELMLSL
Trigger: CAGTGACAACATTAGCTCCAAAAACATCGCAACGAA...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAAGGAACCAGTTTGGTTaGAGGAACCTCAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQARNQFG*RNLRTW
Trigger: CCAAGTCCTGAGGTTCCTCAAACCAAACTGGTTCCT...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGACTTGATGTAGTTTaGGGTCTGGGACGGGGACGA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGLDVV*GLGRGR
Trigger: TCGTCCCCGTCCCAGACCCAAAACTACATCAAGTCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS CCA 90 bp GGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACCTTTTGGCAATTTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: GRKNFKRMESLVVLM*TLRFGLLPFGNFCA
Trigger: TGCACAGAAATTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
CDS CCA 90 bp TTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGTTCAGGTTCCTTaGCTACTTAAGCCAAGGATTCATACATTTACCCGATTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: FFRTLLGQPARVQVP*LLKPRIHTFTRFVL
Trigger: CAGAACAAATCGGGTAAATGTATGAATCCTTGGCTTAAGTAGCCAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS CCA 90 bp GGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACATGACATGTTCTCTTCACAC +
Preference number: 5 (lower is better)
Translates to: GRKNFKRMESLVVLM*TLRFGLLHDMFSSH
Trigger: GTGTGAAGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAGAGCATGTTGCATTaGCCACCTCGCATGGGGAAT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLESMLH*PPRMGN
Trigger: ATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTTGGCCTTTTACCTTTaGGCAATTTCTGTGCATTTC +
Preference number: 5 (lower is better)
Translates to: EGPRTSSKPSHLGDQAHKLAFYL*AISVHF
Trigger: GAAATGCACAGAAATTGCCAAAAGGTAAAAGGCCAA...CTTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCT +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQVLMWT*RFGLLP
Trigger: AGGTAAAAGGCCAAACCTCAAAGTCCACATCAATAC...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGCTTTACATTTGGACTaGGACGCAAGAACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIALHLD*DARTSR
Trigger: TCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATGGTTTGGTGATACATaGCTGCCATATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAWFGDT*LPYPRR
Trigger: TCTCCTGGGATATGGCAGCAATGTATCACCAAACCA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATGACTTCTTTTGACTaGGAGGTGGAGCAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSMTSFD*EVEQVA
Trigger: TGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTACCAGCTGCAGAGGTTaGCGAGAACGAGTTTTACCT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSTSCRG*RERVLP
Trigger: AGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGACCAGCTGCAGAGGTTaGCGAGAACGAGTTTTACCT +
Preference number: 5 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLTSCRG*RERVLP
Trigger: AGGTAAAACTCGTTCTCGCAAACCTCTGCAGCTGGT...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCATTGGGACAGTGACTaGGCAATGTCCAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSHWDSD*AMSSHG
Trigger: ACCATGACTGGACATTGCCAAGTCACTGTCCCAATG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGGGATTAGTTTCCTaGGGACATATGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALGLVS*GHMLAL
Trigger: CAGTGCCAGCATATGTCCCAAGGAAACTAATCCCAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCATTGGGATTAGTTTCCTaGGGACATATGCTGGCACTG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQALGLVS*GHMLAL
Trigger: CAGTGCCAGCATATGTCCCAAGGAAACTAATCCCAA...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGGATAGATGTAGTTaGCTGGGGAGCAGGTGTCGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRDRCS*LGSRCR
Trigger: ACGACACCTGCTCCCCAGCAAACTACATCTATCCCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGAACTGGTTGTGTTaGTGGGATTCTTGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRNWLC*WDSWAW
Trigger: CCACGCCCAAGAATCCCACAAACACAACCAGTTCCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATGACACTTCTGGACTaGGTGACGTTTTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIMTLLD*VTFLVL
Trigger: CAAAACCAAAAACGTCACCAAGTCCAGAAGTGTCAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAAGGAGCACATCTTTaGGAGCAGGTGTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSEGAHL*EQVWCM
Trigger: CATACACCACACCTGCTCCAAAAGATGTGCTCCTTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGCGCCTGAGTTGTCTTaGCTAGTTCAGTTGTTCGTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSAPELS*LVQLFV
Trigger: CACGAACAACTGAACTAGCAAAGACAACTCAGGCGC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCTTTGGGGAACCGTTaGACAGAGTCAGTAATGGAG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASLGNR*TESVME
Trigger: CTCCATTACTGACTCTGTCAAACGGTTCCCCAAAGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATCACCAAGCGGGTTTTaGGGTTTCACCTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASPSGF*GFTWNS
Trigger: TGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTGA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGTGGACGACGTGTTCTaGTTCGTTGCGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPVDDVF*FVAMFL
Trigger: CAAAAACATCGCAACGAACAAGAACACGTCGTCCAC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGTCCAAAGTCTAGTTaGGTCTGCAGTGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGPKSS*VCSVSG
Trigger: CCCAGAGACACTGCAGACCAAACTAGACTTTGGACC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAATTTTTGTTGTTGTTGTaGGAGCTGAAGATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQFLLLL*ELKMSQ
Trigger: CTGGGACATCTTCAGCTCCAACAACAACAACAAAAA...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGACGACGGGTTCTTTTaGTTGTTGTTGTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSADDGFF*LLLLEL
Trigger: CAGCTCCAACAACAACAACAAAAAGAACCCGTCGTC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGACGACGGGTTCTTTTaGTTGTTGTTGTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQADDGFF*LLLLEL
Trigger: CAGCTCCAACAACAACAACAAAAAGAACCCGTCGTC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTGTCCGTTGTGATGTTTaGGAAGCTAATGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIVRCDV*EANVVE
Trigger: CTCAACAACATTAGCTTCCAAAACATCACAACGGAC...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGCAGTAGGAACTGGTTaGGATTCAGGTGCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSAVGTG*DSGASG
Trigger: TCCTGAAGCACCTGAATCCAAACCAGTTCCTACTGC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGAGTGTAACAGGTTaGAGCTCCGCAGTAGGAACT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLSVTG*SSAVGT
Trigger: AGTTCCTACTGCGGAGCTCAAACCTGTTACACTCAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTTCCGGGGTCCTTTaGCTGAGAACCAGTGTTGTT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVSGVL*LRTSVV
Trigger: AACAACACTGGTTCTCAGCAAAAGGACCCCGGAAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTATTCTGGAAGGCTTTTaGGAGCTAGAGTGCTCAGTG +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPILEGF*ELECSV
Trigger: CACTGAGCACTCTAGCTCCAAAAAGCCTTCCAGAAT...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTAATGTTGTTGAAGGTTaGGTTCCTGGTGTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARINVVEG*VPGVSG
Trigger: ACCTGAAACACCAGGAACCAAACCTTCAACAACATT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAAAATGTTGTTGAAGGTTaGGTTCCTGGTGTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQNVVEG*VPGVSG
Trigger: ACCTGAAACACCAGGAACCAAACCTTCAACAACATT...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGTGGTGCTAATGTTGTaGAAGGTTTGGTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQAVVLML*KVWFLV
Trigger: CACCAGGAACCAAACCTTCAACAACATTAGCACCAC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCGACGACCTGGTCTTTaGGTCTTTCGTGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRRPGL*VFRGAN
Trigger: ATTAGCACCACGAAAGACCAAAAGACCAGGTCGTCG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTCTCTCAGATGGTTTaGAGGCAGTTGTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVSQMV*RQLWAP
Trigger: TGGTGCCCACAACTGCCTCAAAACCATCTGAGAGAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTCGTTGCGATGTTTTaGGAGCTAATGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFVAMF*ELMLSL
Trigger: CAGTGACAACATTAGCTCCAAAAACATCGCAACGAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGGAACCAGTTTAGTTaGAGGTACTTCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSARNQFS*RYFWMG
Trigger: CCCCATCCAGAAGTACCTCAAACTAAACTGGTTCCT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGGAACCAGTTTGGTTaGAGGAACCTCAGGACTTGG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSRNQFG*RNLRTW
Trigger: CCAAGTCCTGAGGTTCCTCAAACCAAACTGGTTCCT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS GCA 90 bp TCAGTTATATTTTCCAGTTCTTCTCCAGAGGCAGGAACTGTTGGTTaGTTTATATCTGTCTCTATTCTCTCCAAGGGAGTTCCAGTAGGC +
Preference number: 5 (lower is better)
Translates to: SVIFSSSSPEAGTVG*FISVSILSKGVPVG
Trigger: GCCTACTGGAACTCCCTTGGAGAGAATAGAGACAGATATAAAGCAACCAACAGTTCCTGCCTCTGGAGAAGAACTGGAAAATATAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000469764.1
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CCA 90 bp TTTGCTAGTTCAGTTGTTCGTGGAATCTTAGTTGTGAAAGGTTCTTaGGTGGATTGGTCTGTTTCTTCCAGAGTGGTCTGTAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: FASSVVRGILVVKGS*VDWSVSSRVVCSSS
Trigger: AGAGGAACTACAGACCACTCTGGAAGAAACAGACCAATCCACCCAAGAACCTTTCACAACTAAGATTCCACGAACAACTGAACTAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000495591.5
ENST00000497395.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTGGCCTTTTACCTTTaGGCAATTTCTGTGCATTTC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILAFYL*AISVHF
Trigger: GAAATGCACAGAAATTGCCAAAAGGTAAAAGGCCAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GAGGATGGAGTCACTTGTGGTATTGATGTGGACTTTGAGGTTTGGCCTTTTACAGCTTTACATTTGGACTaGGACGCAAGAACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: EDGVTCGIDVDFEVWPFTALHLD*DARTSR
Trigger: TCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGC...TGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGTGGTTTGGTGATACATaGCTGCCATATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLWFGDT*LPYPRR
Trigger: TCTCCTGGGATATGGCAGCAATGTATCACCAAACCA...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATGACTTCTTTTGACTaGGAGGTGGAGCAGGTCGCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLMTSFD*EVEQVA
Trigger: TGCGACCTGCTCCACCTCCAAGTCAAAAGAAGTCAT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCATTGGGACAGTGACTaGGCAATGTCCAGTCATGGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHWDSD*AMSSHG
Trigger: ACCATGACTGGACATTGCCAAGTCACTGTCCCAATG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATTCCACCTTCCACATaGTCTTTCACTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIIPPST*SFTPNS
Trigger: TGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCCAGGGTTAGCTAATTGTGTCTaGAGTGCATCTGAAATCTCA +
Preference number: 5 (lower is better)
Translates to: LLPVIGISLGLYWDSLPGLANCV*SASEIS
Trigger: TGAGATTTCAGATGCACTCAAGACACAATTAGCTAA...CCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACCAGAATACGATCACTaGTTGCTGTGTAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAPEYDH*LLCRNL
Trigger: CAGATTCCTACACAGCAACAAGTGATCGTATTCTGG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTCCAGAATACGATCACTaGTTGCTGTGTAGGAATCTG +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPPEYDH*LLCRNL
Trigger: CAGATTCCTACACAGCAACAAGTGATCGTATTCTGG...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGTTTGTGGGATTCTaGGGCGTGGTGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVFVGF*GVVMFL
Trigger: CAAAAACATCACCACGCCCAAGAATCCCACAAACAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAAGGAGCACATCTTTaGGAGCAGGTGTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLEGAHL*EQVWCM
Trigger: CATACACCACACCTGCTCCAAAAGATGTGCTCCTTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAGTTGTGAAAGGTTCTaGGGTGGATTGGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSASCERF*GGLVCF
Trigger: GAAACAGACCAATCCACCCAAGAACCTTTCACAACT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGCGCCTGAGTTGTCTTaGCTAGTTCAGTTGTTCGTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLAPELS*LVQLFV
Trigger: CACGAACAACTGAACTAGCAAAGACAACTCAGGCGC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGTGTGGCGCCTGAGTaGTCTTTGCTAGTTCAGTTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLCVAPE*SLLVQL
Trigger: CAACTGAACTAGCAAAGACAACTCAGGCGCCACACA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTACTGTTGTCAGGCTTTaGGATGTATCGCACATGAGG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSTVVRL*DVSHMR
Trigger: CCTCATGTGCGATACATCCAAAAGCCTGACAACAGT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATGGAGCAGGGACTGTaGTCAGGCTTTTGGATGTAT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSMEQGL*SGFWMY
Trigger: ATACATCCAAAAGCCTGACAACAGTCCCTGCTCCAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACCAAGCGGGTTTTaGGGTTTCACCTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSPSGF*GFTWNS
Trigger: TGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTACCTATTTCTCCAAATaGGACAGGTTCCTGGCGAAC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSTYFSK*DRFLAN
Trigger: GTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGGT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTCTGAACATAATTGATTaGGGTGTGACCACCTATTTC +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILNIID*GVTTYF
Trigger: GAAATAGGTGGTCACACCCAAATCAATTATGTTCAG...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTTTTGTGCTCAGACTaGACTTCACATTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIFLCSD*TSHSVS
Trigger: AGAGACTGAATGTGAAGTCAAGTCTGAGCACAAAAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGGACGACGTGTTCTaGTTCGTTGCGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVDDVF*FVAMFL
Trigger: CAAAAACATCGCAACGAACAAGAACACGTCGTCCAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp AGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCACACAATTCTTTTTGTTGTTGTaGTTGGAGCTGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: RGTKNVIQTKSFRRSGTQFFLLL*LELKMS
Trigger: GGACATCTTCAGCTCCAACAACAACAACAAAAAGAA...TTGTGTGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCAGACGGGTTCTTTTTGTaGTTGTTGTTGGAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQADGFFL*LLLELK
Trigger: CTTCAGCTCCAACAACAACAACAAAAAGAACCCGTC...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAAGGGAAGGGTGTTTTaGCCTCAGGAAATTCTGGAA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAKGRVF*PQEILE
Trigger: TTCCAGAATTTCCTGAGGCAAAAACACCCTTCCCTT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGAGTGTAACAGGTTaGAGCTCCGCAGTAGGAACT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLSVTG*SSAVGT
Trigger: AGTTCCTACTGCGGAGCTCAAACCTGTTACACTCAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGTGTTTCAGGTCCTATaGTTGACTGTGATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPVFQVL*LTVMAV
Trigger: TACTGCCATCACAGTCAACAATAGGACCTGAAACAC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGGTGCTAATGTTGTaGAAGGTTTGGTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVVLML*KVWFLV
Trigger: CACCAGGAACCAAACCTTCAACAACATTAGCACCAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTTTCGTGGTGCTAATGTaGTTGAAGGTTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPFVVLM*LKVWFL
Trigger: CAGGAACCAAACCTTCAACAACATTAGCACCACGAA...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTATTGTTTTGGTGGTTTaGAACCAGGCTGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARIIVLVV*NQAEFE
Trigger: CTCAAATTCAGCCTGGTTCAAAACCACCAAAACAAT...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCAGTCAGAGCAAATGTaGTTCCTGGAGCATCAGTAC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSQSEQM*FLEHQY
Trigger: GTACTGATGCTCCAGGAACAACATTTGCTCTGACTG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACTGTCATTTCTAGGCTaGGTGATGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALSFLG*VMSLVS
Trigger: TGAAACCAGTGACATCACCAAGCCTAGAAATGACAG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCACTAGAGGAGCTATTGTaGTCTTTGGTGGCTCAAATC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALEELL*SLVAQI
Trigger: GATTTGAGCCACCAAAGACAACAATAGCTCCTCTAG...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCT +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAVLMWT*RFGLLP
Trigger: AGGTAAAAGGCCAAACCTCAAAGTCCACATCAATAC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAESLVV*MWTLRF
Trigger: AAACCTCAAAGTCCACATCAATACCACAAGTGACTC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTGGGACAGCCTGCTTTACATTTGGACTaGGACGCAAGAACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: MTVTSRHRHFFRTLLGQPALHLD*DARTSR
Trigger: TCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGC...AGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGTTTGGTGATACATaGCTGCCATATCCCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLWFGDT*LPYPRR
Trigger: TCTCCTGGGATATGGCAGCAATGTATCACCAAACCA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAGGGAAGTACTGGTTaGGTGATACATTGCTGCCAT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLEGSTG*VIHCCH
Trigger: ATGGCAGCAATGTATCACCAAACCAGTACTTCCCTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTAGGTTTTCCACAATaGTTTCAGTGGCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALGFPQ*FQWLDR
Trigger: TCTGTCCAGCCACTGAAACAATTGTGGAAAACCTAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTTAAAGAGGGACCAAGAACGTCATCCAAACCAAGTCATTTAGGAGATCAGGCATTAGGTTTTCCACAATaGTTTCAGTGGCTGGACAGA +
Preference number: 5 (lower is better)
Translates to: FKEGPRTSSKPSHLGDQALGFPQ*FQWLDR
Trigger: TCTGTCCAGCCACTGAAACAATTGTGGAAAACCTAA...TGCCTGATCTCCTAAATGACTTGGTTTGGATGACGTTCTTGGTCCCTCTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTGGCACTGTGTGGTCTaGGTCATAGGTACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLWHCVV*VIGTLD
Trigger: ATCCAAAGTACCTATGACCAAGACCACACAGTGCCA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGCAAGGATTTTAGCTAATTGTGTCTaGAGTGCATCTGAAATCTCA +
Preference number: 5 (lower is better)
Translates to: GKYRERSFQNDCNSAARILANCV*SASEIS
Trigger: TGAGATTTCAGATGCACTCAAGACACAATTAGCTAA...AATCCTTGCTGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTCAGGAGTCACTGTaGTGGGTCGTGCTGAGATTT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFQESL*WVVLRF
Trigger: AAATCTCAGCACGACCCACAACAGTGACTCCTGAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCATGGCTTTTCACTaGAAGCCAGTGTTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSMAFH*KPVLFL
Trigger: CAGAAACAACACTGGCTTCAAGTGAAAAGCCATGGA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTGTTTGTGGGATTCTaGGGCGTGGTGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVFVGF*GVVMFL
Trigger: CAAAAACATCACCACGCCCAAGAATCCCACAAACAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACCTTAGGAACTGGTaGTGTTTGTGGGATTCTTGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHLRNW*CLWDSW
Trigger: CCAAGAATCCCACAAACACAACCAGTTCCTAAGGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATGACACTTCTGGACTaGGTGACGTTTTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAMTLLD*VTFLVL
Trigger: CAAAACCAAAAACGTCACCAAGTCCAGAAGTGTCAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGTTCTTGGGTGGATaGGTCTGTTTCTTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRFLGG*VCFFQS
Trigger: ACTCTGGAAGAAACAGACCAATCCACCCAAGAACCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTAGTTGTGAAAGGTTCTaGGGTGGATTGGTCTGTTTC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSSCERF*GGLVCF
Trigger: GAAACAGACCAATCCACCCAAGAACCTTTCACAACT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTACTGTTGTCAGGCTTTaGGATGTATCGCACATGAGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLTVVRL*DVSHMR
Trigger: CCTCATGTGCGATACATCCAAAAGCCTGACAACAGT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTTTGGGGAACCGTTaGACAGAGTCAGTAATGGAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSLGNR*TESVME
Trigger: CTCCATTACTGACTCTGTCAAACGGTTCCCCAAAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCACCAAGCGGGTTTTaGGGTTTCACCTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSPSGF*GFTWNS
Trigger: TGAATTCCAGGTGAAACCCAAAAACCCGCTTGGTGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTGTATCTGAGAGAGTaGCACAGCTGCACTCCTACA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLYLRE*HSCTPT
Trigger: TGTAGGAGTGCAGCTGTGCAACTCTCTCAGATACAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTACCTATTTCTCCAAATaGGACAGGTTCCTGGCGAAC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLTYFSK*DRFLAN
Trigger: GTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGGT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTGGACGACGTGTTCTaGTTCGTTGCGATGTTTTTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVDDVF*FVAMFL
Trigger: CAAAAACATCGCAACGAACAAGAACACGTCGTCCAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTTTTGTTGTTGTTGTaGGAGCTGAAGATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFLLLL*ELKMSQ
Trigger: CTGGGACATCTTCAGCTCCAACAACAACAACAAAAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGACGGGTTCTTTTTGTaGTTGTTGTTGGAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSDGFFL*LLLELK
Trigger: CTTCAGCTCCAACAACAACAACAAAAAGAACCCGTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGACGACGGGTTCTTTTaGTTGTTGTTGTTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLDDGFF*LLLLEL
Trigger: CAGCTCCAACAACAACAACAAAAAGAACCCGTCGTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTGTTTCAGGTCCTATaGTTGACTGTGATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVFQVL*LTVMAV
Trigger: TACTGCCATCACAGTCAACAATAGGACCTGAAACAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGGAACTATGGTCATaGAGGGAGCTTCAGTTTCAA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSWELWS*RELQFQ
Trigger: TTGAAACTGAAGCTCCCTCAATGACCATAGTTCCCA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAGGAACCAGTTTAGTTaGAGGTACTTCTGGATGGGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLRNQFS*RYFWMG
Trigger: CCCCATCCAGAAGTACCTCAAACTAAACTGGTTCCT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCAGTCAGAGCAAATGTaGTTCCTGGAGCATCAGTAC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLQSEQM*FLEHQY
Trigger: GTACTGATGCTCCAGGAACAACATTTGCTCTGACTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCCAGAGCTAATGTTGTaGAAGGTTTGGTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLPELML*KVWFLV
Trigger: CACCAGGAACCAAACCTTCAACAACATTAGCTCTGG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGTTCCAGAGCTAATGTaGTTGAAGGTTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSVPELM*LKVWFL
Trigger: CAGGAACCAAACCTTCAACAACATTAGCTCTGGAAC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000495591.5
CDS TCA 90 bp GTCACTTGTGGTATTGATGTGGACTTTGAGGTTTGGCCTTTTACATaGCATGTTCTCTTCACACCTGGCTTCTTTCATTCAGCATCATTT +
Preference number: 5 (lower is better)
Translates to: VTCGIDVDFEVWPFT*HVLFTPGFFHSASF
Trigger: AAATGATGCTGAATGAAAGAAGCCAGGTGTGAAGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTGGCCTTTTACCTTTaGGCAATTTCTGTGCATTTC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSALAFYL*AISVHF
Trigger: GAAATGCACAGAAATTGCCAAAAGGTAAAAGGCCAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSESLVV*MWTLRF
Trigger: AAACCTCAAAGTCCACATCAATACCACAAGTGACTC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGCTTTACATTTGGACTaGGACGCAAGAACTTCAAGA +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSALHLD*DARTSR
Trigger: TCTTGAAGTTCTTGCGTCCAAGTCCAAATGTAAAGC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAATTCCACCTTCCACATaGTCTTTCACTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAIPPST*SFTPNS
Trigger: TGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAAT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAGAATACGATCACTTGTaGCTGTGTAGGAATCTGATA +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAEYDHL*LCRNLI
Trigger: TATCAGATTCCTACACAGCAACAAGTGATCGTATTC...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp TTCTCCTGGATAGCTCTGTACGAGAAGCAGTTGCTACCCATGTTAAATAATTTGTTTCAGAGAAATAAATaGTGTTTTACCGGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: FSWIALYEKQLLPMLNNLFQRNK*CFTGSR
Trigger: CCGGCTCCCGGTAAAACACAATTTATTTCTCTGAAA...CAAATTATTTAACATGGGTAGCAACTGCTTCTCGTACAGAGCTATCCAGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTATGACACTTCTGGACTaGGTGACGTTTTTGGTTTTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSMTLLD*VTFLVL
Trigger: CAAAACCAAAAACGTCACCAAGTCCAGAAGTGTCAT...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGCAGGAACTGTTGGTaGCTTTATATCTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGRNCW*LYICLY
Trigger: ATAGAGACAGATATAAAGCAACCAACAGTTCCTGCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCAGAGGCAGGAACTGTaGGTTGCTTTATATCTGTCT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLQRQEL*VALYLS
Trigger: AGACAGATATAAAGCAACCAACAGTTCCTGCCTCTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCATTCTTTTTGTTGTTGTaGTTGGAGCTGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAFFLLL*LELKMS
Trigger: GGACATCTTCAGCTCCAACAACAACAACAAAAAGAA...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTGGGTTCTTTTTGTTGTaGTTGTTGGAGCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSGFFLL*LLELKM
Trigger: CATCTTCAGCTCCAACAACAACAACAAAAAGAACCC...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTGTTTCAGGTCCTATaGTTGACTGTGATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVFQVL*LTVMAV
Trigger: TACTGCCATCACAGTCAACAATAGGACCTGAAACAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCGTGGTGCTAATGTaGTTGAAGGTTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFVVLM*LKVWFL
Trigger: CAGGAACCAAACCTTCAACAACATTAGCACCACGAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCGTTGCGATGTTTTaGGAGCTAATGTTGTCACTG +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSFVAMF*ELMLSL
Trigger: CAGTGACAACATTAGCTCCAAAAACATCGCAACGAA...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTGTCATTTCTAGGCTaGGTGATGTCACTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLSFLG*VMSLVS
Trigger: TGAAACCAGTGACATCACCAAGCCTAGAAATGACAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCTCTAGAGGAGCTATaGTTGTCTTTGGTGGCTCAA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSLEEL*LSLVAQ
Trigger: TTGAGCCACCAAAGACAACAATAGCTCCTCTAGAGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471714.6
CDS CCA 90 bp TTCCACCTTCCACATTGTCTTTCACTCCAAATTCATAAACTGTGTTaGGCTTTAGGTTTTCCACAATTGTTTCAGTGGCTGGACAGATTT +
Preference number: 5 (lower is better)
Translates to: FHLPHCLSLQIHKLC*ALGFPQLFQWLDRF
Trigger: AAATCTGTCCAGCCACTGAAACAATTGTGGAAAACCTAAAGCCCAACACAGTTTATGAATTTGGAGTGAAAGACAATGTGGAAGGTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000527258.5
ENST00000530539.2
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVLMWT*RFGLLP
Trigger: AGGTAAAAGGCCAAACCTCAAAGTCCACATCAATAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCTTCAAGCTTTACATTaGGACTTGGACGCAAGAACT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLQALH*DLDART
Trigger: AGTTCTTGCGTCCAAGTCCAAATGTAAAGCTTGAAG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATCATAAGTTGCAGTTaGAGGCTGCAGAACTTTGGA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLIISCS*RLQNFG
Trigger: TCCAAAGTTCTGCAGCCTCAAACTGCAACTTATGAT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTCAGAGAAATAAATaGTGTTTTACCGGGAGCCGG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFQRNK*CFTGSR
Trigger: CCGGCTCCCGGTAAAACACAATTTATTTCTCTGAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGGCAGGAACTGTTGGTaGCTTTATATCTGTCTCTAT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLGRNCW*LYICLY
Trigger: ATAGAGACAGATATAAAGCAACCAACAGTTCCTGCC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTCTGAACATAATTGATTaGGGTGTGACCACCTATTTC +
Preference number: 5 (lower is better)
Translates to: GSQLPQKCYSVNISILLSLNIID*GVTTYF
Trigger: GAAATAGGTGGTCACACCCAAATCAATTATGTTCAG...AGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp ATGTTGAAAGGTAAGTACAGGGAAAGGTCCTTTCAGAATGACTGCAACAGTGCAAAACAGAAGGTAACTTaGTGCAGCATCTACCATTTT +
Preference number: 5 (lower is better)
Translates to: MLKGKYRERSFQNDCNSAKQKVT*CSIYHF
Trigger: AAAATGGTAGATGCTGCACAAAGTTACCTTCTGTTT...TGCACTGTTGCAGTCATTCTGAAAGGACCTTTCCCTGTACTTACCTTTCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTTTGTTGTTGTTGTaGGAGCTGAAGATGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFLLLL*ELKMSQ
Trigger: CTGGGACATCTTCAGCTCCAACAACAACAACAAAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTCCGTTGTGATGTTTaGGAAGCTAATGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVRCDV*EANVVE
Trigger: CTCAACAACATTAGCTTCCAAAACATCACAACGGAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAATGTTGTTGAAGGTTaGGTTCCTGGTGTTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLNVVEG*VPGVSG
Trigger: ACCTGAAACACCAGGAACCAAACCTTCAACAACATT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTCACTTGAAGCCAGTGTaGTTTCTGAAACATCTAATG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLHLKPV*FLKHLM
Trigger: CATTAGATGTTTCAGAAACAACACTGGCTTCAAGTG...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGAATACGATCACTTGTaGCTGTGTAGGAATCTGATA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLEYDHL*LCRNLI
Trigger: TATCAGATTCCTACACAGCAACAAGTGATCGTATTC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTTTTGTGCTCAGACTaGACTTCACATTCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFLCSD*TSHSVS
Trigger: AGAGACTGAATGTGAAGTCAAGTCTGAGCACAAAAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTCGTGCATTATCTTTTaGTGCTCAGACTTGACTTCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLSCIIF*CSDLTS
Trigger: TGAAGTCAAGTCTGAGCACAAAAAGATAATGCACGA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTCTTTTTGTTGTTGTaGTTGGAGCTGAAGATGTCC +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLFFLLL*LELKMS
Trigger: GGACATCTTCAGCTCCAACAACAACAACAAAAAGAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTATTGTTTTGGTGGTTTaGAACCAGGCTGAATTTGAG +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLIVLVV*NQAEFE
Trigger: CTCAAATTCAGCCTGGTTCAAAACCACCAAAACAAT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS TCA 90 bp TTATATATCAGTAAGAAATCAGTATGTATCCATCCAGAGAACATTTaGTTAGTGGTCAGAGAGAGACCAGAGTTTGGTGTCAGACTGTCA +
Preference number: 5 (lower is better)
Translates to: LYISKKSVCIHPENI*LVVRERPEFGVRLS
Trigger: TGACAGTCTGACACCAAACTCTGGTCTCTCTCTGACCACTAATCAAATGTTCTCTGGATGGATACATACTGATTTCTTACTGATATATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTTTAGCTAATTGTGTCTaGAGTGCATCTGAAATCTCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLLANCV*SASEIS
Trigger: TGAGATTTCAGATGCACTCAAGACACAATTAGCTAA...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284322.10
ENST00000471714.6
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTAAACAGAAGGTAACTTaGTGCAGCATCTACCATTTT +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLKQKVT*CSIYHF
Trigger: AAAATGGTAGATGCTGCACAAAGTTACCTTCTGTTT...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000495591.5
CDS-3UTR CAA 90 bp GGAGCCAGCTTCCCCAAAAATGTTATTCTGTTAACATCAGTATCTTGCTTTCTTGTTCTTTTTGATGTTTaGGTAGCTAAGGTTGTTGCA +
Preference number: 5 (lower is better)
Translates to: GASFPKNVILLTSVSCFLVLFDV*VAKVVA
Trigger: TGCAACAACCTTAGCTACCAAAACATCAAAAAGAAC...AAGAAAGCAAGATACTGATGTTAACAGAATAACATTTTTGGGGAAGCTGGCTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS TCA 90 bp AAATGTCTGATTTGTCATTTGAATGGACTTGTTCTTCCCACTGAATaGCCCATTTTCTCTGGATATAACTTCATATTCAGTGACAGTGTC +
Preference number: 5 (lower is better)
Translates to: KCLICHLNGLVLPTE*PIFSGYNFIFSDSV
Trigger: GACACTGTCACTGAATATGAAGTTATATCCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGTCCATTCAAATGACAAATCAGACATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CCA 72 bp GCACCCTTCCACGGTGACCACAGTGAGGTTGGTGGGTaGGTTCTGTGGTGGGCTGGTGGCATTCCCCTCTGT +
Preference number: 6 (lower is better)
Translates to: APFHGDHSEVGG*VLWWAGGIPLC
Trigger: ACAGAGGGGAATGCCACCAGCCCACCACAGAACCCACCCACCAACCTCACTGTGGTCACCGTGGAAGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS TCA 72 bp AACCCTGGAGCTGCATTTAAGTGGACTGTCTCCCAGTaGCAGAGGCGGGCGGCTGCACTTAGCTGTGCCGTG +
Preference number: 6 (lower is better)
Translates to: NPGAAFKWTVSQ*QRRAAALSCAV
Trigger: CACGGCACAGCTAAGTGCAGCCGCCCGCCTCTGTCACTGGGAGACAGTCCACTTAAATGCAGCTCCAGGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284322.10
CDS TCA 72 bp GGAGAGCATGTTGCATTTGCCACCTCGCATGGGGAATaGTGCTGGTGGGTGCCTCGCAACCCTGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: GEHVAFATSHGE*CWWVPRNPGAA
Trigger: TGCAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000530539.2
CDS CCA 72 bp AGGCAGTTGTGGGCACCAAGGGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCGGGTTTGGACTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: RQLWAPRAPVVS*QVPERVWTWAL
Trigger: AAGTGCCCAAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000471714.6
ENST00000495063.6
ENST00000533795.5
ENST00000533855.5
CDS CAA 90 bp GGGTTCTGTGGTGGGCTGGTGGCATTCCCCTCTGTGGCCTCCTCTTaGGGGAACCGTTTGACAGAGTCAGTAATGGAGCAGGGACTGTTG +
Preference number: 6 (lower is better)
Translates to: GFCGGLVAFPSVASS*GNRLTESVMEQGLL
Trigger: CAACAGTCCCTGCTCCATTACTGACTCTGTCAAACGGTTCCCCAAAGAGGAGGCCACAGAGGGGAATGCCACCAGCCCACCACAGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CAA 90 bp CTCAATGTCTGTGGTGGGAACAGTTGTGGGCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAGAGCGGGTTTGGACTTGGGCACTTC +
Preference number: 6 (lower is better)
Translates to: LNVCGGNSCGHQGLR*YRGRFQSGFGLGHF
Trigger: GAAGTGCCCAAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTTCCCACCACAGACATTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534413.5
CDS CCA 72 bp AGACAGTTGTGGGCACCAAGGGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCGGGTTTGGACTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: RQLWAPRAPVVS*QVPERVWTWAL
Trigger: AAGTGCCCAAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486770.7
CDS CCA 72 bp GAACAGTTGTGGGCACCAAGGGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCGGGTTTGGACTTGGGCACTT +
Preference number: 6 (lower is better)
Translates to: EQLWAPRAPVVS*QVPERVWTWAL
Trigger: AAGTGCCCAAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534413.5
CDS CAA 72 bp AGGCTCAGAGACAGTTGTGGGCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAGAGCGGGTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: RLRDSCGHQGLR*YRGRFQSGFGL
Trigger: AAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTCTCTGAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486770.7
CDS CAA 72 bp TGTGGTGGGAACAGTTGTGGGCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAGAGCGGGTTTGGACTT +
Preference number: 6 (lower is better)
Translates to: CGGNSCGHQGLR*YRGRFQSGFGL
Trigger: AAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTTCCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534413.5
CDS CAA 90 bp AAATGGAACAGGCTCAGAGACAGTTGTGGGCACCAAGGGCTCCGGTaGTATCGTGGCAGGTTCCAGAGCGGGTTTGGACTTGGGCACTTC +
Preference number: 6 (lower is better)
Translates to: KWNRLRDSCGHQGLR*YRGRFQSGFGLGHF
Trigger: GAAGTGCCCAAGTCCAAACCCGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGTCTCTGAGCCTGTTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486770.7
CDS GCA 72 bp CATTTGCCACCTCGCATGGGGAATGATGCTGGTGGGTaGCTCGCAACCCTGGAGCTGCATTTAAGTGGACTG +
Preference number: 6 (lower is better)
Translates to: HLPPRMGNDAGG*LATLELHLSGL
Trigger: CAGTCCACTTAAATGCAGCTCCAGGGTTGCGAGGCACCCACCAGCATCATTCCCCATGCGAGGTGGCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284322.10
ENST00000486770.7
ENST00000530539.2
CDS CCA 72 bp AAGGGTGGGCGGCGAGTCCCTGGCTTTTTAGTGGGGTaGGTAGAGTCCACTGATACATTTCTATCAGCACCT +
Preference number: 6 (lower is better)
Translates to: KGGRRVPGFLVG*VESTDTFLSAP
Trigger: AGGTGCTGATAGAAATGTATCAGTGGACTCTACCCACCCCACTAAAAAGCCAGGGACTCGCCGCCCACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
ENST00000497395.5
CDS CCA 72 bp AGGCAGTTGTGGGCACCAAGGGCTCCGGTTGTATCGTaGCAGGTTCCAGAGCTAATGTTGTTGAAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: RQLWAPRAPVVS*QVPELMLLKVW
Trigger: CCAAACCTTCAACAACATTAGCTCTGGAACCTGCCACGATACAACCGGAGCCCTTGGTGCCCACAACTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495591.5
CDS CAA 72 bp GCACTTGTGGTTCTTTCAGGTTTGGTTCTTGGCGGTTaGGGCCGGGGGCGTCGTTTAGGTGTAGAAGGGATA +
Preference number: 6 (lower is better)
Translates to: ALVVLSGLVLGG*GRGRRLGVEGI
Trigger: TATCCCTTCTACACCTAAACGACGCCCCCGGCCCAAACCGCCAAGAACCAAACCTGAAAGAACCACAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000486770.7
ENST00000495063.6
ENST00000533855.5
CDS CAA 90 bp TTGACCCCTGTTCCCACTCCATTCCCACTGGGCATCCCACTGGGTTaGGGCCTAGTAGGTCTTGTAGTTGTCCTATTCAGAACAGGTCTG +
Preference number: 6 (lower is better)
Translates to: LTPVPTPFPLGIPLG*GLVGLVVVLFRTGL
Trigger: CAGACCTGTTCTGAATAGGACAACTACAAGACCTACTAGGCCCAAACCCAGTGGGATGCCCAGTGGGAATGGAGTGGGAACAGGGGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000497395.5
CDS CAA 72 bp CCACAGAGAAGTAGACACCCCAAACTGGAGAGCATGTaGCATTTGCCACCTCGCATGGGGAATGATGCTGGT +
Preference number: 6 (lower is better)
Translates to: PQRSRHPKLESM*HLPPRMGNDAG
Trigger: ACCAGCATCATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTTTGGGGTGTCTACTTCTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000530236.6
ENST00000530539.2
CDS CAA 72 bp GTTCCCACTCCATTCCCACTGGGCATCCCACTGGGTTaGGGCCTAGTAGGTCTTGTAGTTGTCCTATTCAGA +
Preference number: 6 (lower is better)
Translates to: VPTPFPLGIPLG*GLVGLVVVLFR
Trigger: TCTGAATAGGACAACTACAAGACCTACTAGGCCCAAACCCAGTGGGATGCCCAGTGGGAATGGAGTGGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000497395.5
CDS CAA 90 bp GTAATACTTCCACAGAGAAGTAGACACCCCAAACTGGAGAGCATGTaGCATTTGCCACCTCGCATGGGGAATGATGCTGGTGGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: VILPQRSRHPKLESM*HLPPRMGNDAGGCL
Trigger: GAGGCACCCACCAGCATCATTCCCCATGCGAGGTGGCAAATGCAACATGCTCTCCAGTTTGGGGTGTCTACTTCTCTGTGGAAGTATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000530539.2
CDS TCA 72 bp AGGAACTGGTTGTGTTTGTGGGATTCTTGGGCGTGGTaGTGTTTTTGGCTTAGGAGGAGCACGTGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: RNWLCLWDSWAW*CFWLRRSTWCL
Trigger: CAGACACCACGTGCTCCTCCTAAGCCAAAAACATCACCACGCCCAAGAATCCCACAAACACAACCAGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000284322.10
ENST00000466947.5
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000478235.5
ENST00000482765.5
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
ENST00000527943.5
CDS CCA 72 bp CTTCAGTCTTTGGCTCCTCTGGCCAGAGTGGTGCTTTaGCAGTGGGATATACATAGTCTGTTTTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: LQSLAPLARVVL*QWDIHSLFWLV
Trigger: CACCAGCCAAAACAGACTATGTATATCCCACTGCCAAAGCACCACTCTGGCCAGAGGAGCCAAAGACTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471714.6
ENST00000482765.5
ENST00000495591.5
CDS CAA 72 bp GTCTGGGTGGCAAGGGTGGGCGGCGAGTCCCTGGGATaGTGGATAAGAGATTGTATTTTAGATAAAGCCATC +
Preference number: 6 (lower is better)
Translates to: VWVARVGGESLG*WIRDCILDKAI
Trigger: GATGGCTTTATCTAAAATACAATCTCTTATCCACAATCCCAGGGACTCGCCGCCCACCCTTGCCACCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469764.1
CDS TCA 72 bp TCAGGTCCTATTGTTGACTGTGATGGCAGTAGAGTCTaGGGTTCTGGGGCAGGTTTGGTGTGTGTCACTTCT +
Preference number: 6 (lower is better)
Translates to: SGPIVDCDGSRV*GSGAGLVCVTS
Trigger: AGAAGTGACACACACCAAACCTGCCCCAGAACCTCAGACTCTACTGCCATCACAGTCAACAATAGGACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000471714.6
ENST00000486770.7
ENST00000495063.6
ENST00000495591.5
ENST00000533855.5
CDS CAA 90 bp CCGTTTGACAGAGTCAGTAATGGAGCAGGGACTGTTGTCAGGCTTTaGGATGTATCGCACATGAGGTCCTTTGAATCTTGGCTTCCCAAG +
Preference number: 6 (lower is better)
Translates to: PFDRVSNGAGTVVRL*DVSHMRSFESWLPK
Trigger: CTTGGGAAGCCAAGATTCAAAGGACCTCATGTGCGATACATCCAAAAGCCTGACAACAGTCCCTGCTCCATTACTGACTCTGTCAAACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CCA 72 bp GGACTTGGTGACGTTTTTGGTTTTGCAGTAACACGCTaGGGCACCTTAGGAACTGGTTGTGTTTGTGGGATT +
Preference number: 6 (lower is better)
Translates to: GLGDVFGFAVTR*GTLGTGCVCGI
Trigger: AATCCCACAAACACAACCAGTTCCTAAGGTGCCCCAGCGTGTTACTGCAAAACCAAAAACGTCACCAAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000284322.10
ENST00000466947.5
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000478235.5
ENST00000482765.5
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
ENST00000527943.5
CDS CCA 72 bp TTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATTaGGACAGCCTGCCAGGGTTCAGGTTCCTTGGCTAC +
Preference number: 6 (lower is better)
Translates to: LLPVIGISLGLY*DSLPGFRFLGY
Trigger: GTAGCCAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS CAA 72 bp GTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATaGGGACAGCCTGCCAGGGTTCAGGTTCCTTGGCTA +
Preference number: 6 (lower is better)
Translates to: VTSRHRHFFRTL*GQPARVQVPWL
Trigger: TAGCCAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS CAA 90 bp GGACTTGGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTTGGCCTTTTACCTGAAAAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: GLGRKNFKRMESLVV*MWTLRFGLLPEKAL
Trigger: CAGGGCCTTTTCAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532144.1
CDS CAA 90 bp ATGATGACTGTTACTTCCCGTCATAGGCATTTCTTTAGGACTTTATaGGGACAGCCTGCCAGGGTTCAGGTTCCTTGGCTACTTAAGCCA +
Preference number: 6 (lower is better)
Translates to: MMTVTSRHRHFFRTL*GQPARVQVPWLLKP
Trigger: TGGCTTAAGTAGCCAAGGAACCTGAACCCTGGCAGGCTGTCCCAATAAAGTCCTAAAGAAATGCCTATGACGGGAAGTAACAGTCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS CCA 72 bp AACAGGCTCAGAGACAGGCTGAATTTGAGGTGCATCTaGTCTGTGTGTGGTTTTAGGTCTCTCAGATGGTTT +
Preference number: 6 (lower is better)
Translates to: NRLRDRLNLRCI*SVCGFRSLRWF
Trigger: AAACCATCTGAGAGACCTAAAACCACACACAGACCAGATGCACCTCAAATTCAGCCTGTCTCTGAGCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533795.5
CDS CAA 72 bp AGAGTCAGTAATGGAGCAGGGACTGTTGTCAGGCTTTaGGATGTATCGCACATGAGGTCCTTTGAATCTTGG +
Preference number: 6 (lower is better)
Translates to: RVSNGAGTVVRL*DVSHMRSFESW
Trigger: CCAAGATTCAAAGGACCTCATGTGCGATACATCCAAAAGCCTGACAACAGTCCCTGCTCCATTACTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CAA 72 bp AAGAGGATGGAGTCACTTGTGGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCTGAAAAGGCCCTGAGC +
Preference number: 6 (lower is better)
Translates to: KRMESLVVLMWT*RFGLLPEKALS
Trigger: GCTCAGGGCCTTTTCAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532144.1
CDS CAA 90 bp AAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCTGAAAAGGCCCTGAGCCAGAGAGAT +
Preference number: 6 (lower is better)
Translates to: KNFKRMESLVVLMWT*RFGLLPEKALSQRD
Trigger: ATCTCTCTGGCTCAGGGCCTTTTCAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532144.1
CDS CCA 72 bp TGGACTGGTAAAGATTTCCAGTTTTTGAGGAACAAATaGTGTTTCACTTGGAGCCAGTGTTGCCCTTGGCTG +
Preference number: 6 (lower is better)
Translates to: WTGKDFQFLRNK*CFTWSQCCPWL
Trigger: CAGCCAAGGGCAACACTGGCTCCAAGTGAAACACCATTTGTTCCTCAAAAACTGGAAATCTTTACCAGTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000459682.1
ENST00000471714.6
ENST00000486770.7
ENST00000495063.6
ENST00000533855.5
CDS CCA 72 bp CGTGGAATCTTAGTTGTGAAAGGTTCTTGGGTGGATTaGTCTGTTTCTTCCAGAGTGGTCTGTAGTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RGILVVKGSWVD*SVSSRVVCSSS
Trigger: AGAGGAACTACAGACCACTCTGGAAGAAACAGACCAATCCACCCAAGAACCTTTCACAACTAAGATTCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000495591.5
ENST00000497395.5
CDS CCA 72 bp ATTTGCCCAGAAGTTCAGTCACCAGGATCAGCCATGTaGTTAACTCTTCAGTGGAATCTGTCCAAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: ICPEVQSPGSAM*LTLQWNLSKKE
Trigger: CTCTTTCTTGGACAGATTCCACTGAAGAGTTAACCACATGGCTGATCCTGGTGACTGAACTTCTGGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS CCA 72 bp AGGCTCGAGGTCTGTAACAGGAACGAATGTTGTCCCTaGAGCCTCTTTTATAGGAGAAACTGGTTCAAAGAT +
Preference number: 6 (lower is better)
Translates to: RLEVCNRNECCP*SLFYRRNWFKD
Trigger: ATCTTTGAACCAGTTTCTCCTATAAAAGAGGCTCCAGGGACAACATTCGTTCCTGTTACAGACCTCGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471714.6
ENST00000478235.5
ENST00000495591.5
CDS CAA 72 bp AGTGCAGTTAGCAACTCCTGGACTTGGGTTTTGATGTaGTGGCTTAACCATGATCATGCACAGCAAGCTTTG +
Preference number: 6 (lower is better)
Translates to: SAVSNSWTWVLM*WLNHDHAQQAL
Trigger: CAAAGCTTGCTGTGCATGATCATGGTTAAGCCACAACATCAAAACCCAAGTCCAGGAGTTGCTAACTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS CAA 90 bp GGACTTGGACGCAAGAACTTCAAGAGGATGGAGTCACTTGTGGTATaGATGTGGACTTTGAGGTTTGGCCTTTTACCTTTTGGCAATTTC +
Preference number: 6 (lower is better)
Translates to: GLGRKNFKRMESLVV*MWTLRFGLLPFGNF
Trigger: GAAATTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTTGCGTCCAAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
CDS CAA 90 bp TCCAGGAATTGTAGTCCCACATTCATACCACTGAACATAATTGATTaGGGTGTGACCACCTATTTCTCCAAATTGGACAGGTTCCTGGCG +
Preference number: 6 (lower is better)
Translates to: SRNCSPTFIPLNIID*GVTTYFSKLDRFLA
Trigger: CGCCAGGAACCTGTCCAATTTGGAGAAATAGGTGGTCACACCCAAATCAATTATGTTCAGTGGTATGAATGTGGGACTACAATTCCTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS GCA 72 bp CCTTCTTTGATTGGTAACTGGTCAGAAGTGAGTTGCTaGCCAGTGCGTCCATCTAAAAATGAATCCACAAAC +
Preference number: 6 (lower is better)
Translates to: PSLIGNWSEVSC*PVRPSKNESTN
Trigger: GTTTGTGGATTCATTTTTAGATGGACGCACTGGGCAGCAACTCACTTCTGACCAGTTACCAATCAAAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CCA 72 bp GCGAATTGTATAAAATCTGTCATTGGGACAGTGACTTaGCAATGTCCAGTCATGGTGTGGGTTGATGAGGAA +
Preference number: 6 (lower is better)
Translates to: ANCIKSVIGTVT*QCPVMVWVDEE
Trigger: TTCCTCATCAACCCACACCATGACTGGACATTGCCAAGTCACTGTCCCAATGACAGATTTTATACAATTCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
ENST00000527258.5
ENST00000530539.2
CDS CCA 72 bp AACAAATGGTGTTTCACTTGGAGCCAGTGTTGCCCTTaGCTGTTCAAGAGTTCTAGAAGTTTTAGGTGGGAT +
Preference number: 6 (lower is better)
Translates to: NKWCFTWSQCCP*LFKSSRSFRWD
Trigger: ATCCCACCTAAAACTTCTAGAACTCTTGAACAGCCAAGGGCAACACTGGCTCCAAGTGAAACACCATTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000459682.1
ENST00000471714.6
ENST00000486770.7
ENST00000495063.6
ENST00000533855.5
CDS CCA 72 bp TCTTGTAGTTGTCCTATTCAGAACAGGTCTGATGTGTaGCTTGTCAGATGTTCTGGGCCTCACAGTAGTATA +
Preference number: 6 (lower is better)
Translates to: SCSCPIQNRSDV*LVRCSGPHSSI
Trigger: TATACTACTGTGAGGCCCAGAACATCTGACAAGCCACACATCAGACCTGTTCTGAATAGGACAACTACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000497395.5
CDS CCA 72 bp AACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACCTGAAAAGGCC +
Preference number: 6 (lower is better)
Translates to: NFKRMESLVVLM*TLRFGLLPEKA
Trigger: GGCCTTTTCAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532144.1
CDS CAA 72 bp TTCAGTTGTTCGTGGAATCTTAGTTGTGAAAGGTTCTaGGGTGGATTGGTCTGTTTCTTCCAGAGTGGTCTG +
Preference number: 6 (lower is better)
Translates to: FSCSWNLSCERF*GGLVCFFQSGL
Trigger: CAGACCACTCTGGAAGAAACAGACCAATCCACCCAAGAACCTTTCACAACTAAGATTCCACGAACAACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000471901.5
ENST00000487012.5
ENST00000495591.5
ENST00000497395.5
CDS CAA 90 bp TGTGGCTTAACCATGATCATGCACAGCAAGCTTTGTAACAGACTCTaGCACACAGAGCAGCCAATACCTTTAATGGAAATAACCTTCCCT +
Preference number: 6 (lower is better)
Translates to: CGLTMIMHSKLCNRL*HTEQPIPLMEITFP
Trigger: AGGGAAGGTTATTTCCATTAAAGGTATTGGCTGCTCTGTGTGCAAGAGTCTGTTACAAAGCTTGCTGTGCATGATCATGGTTAAGCCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS CAA 90 bp AAGAACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACATGACATGTTCTCTTCACACCTGGCT +
Preference number: 6 (lower is better)
Translates to: KNFKRMESLVVLMWT*RFGLLHDMFSSHLA
Trigger: AGCCAGGTGTGAAGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS GCA 72 bp TTTTCCAGTTCTTCTCCAGAGGCAGGAACTGTTGGTTaGTTTATATCTGTCTCTATTCTCTCCAAGGGAGTT +
Preference number: 6 (lower is better)
Translates to: FSSSSPEAGTVG*FISVSILSKGV
Trigger: AACTCCCTTGGAGAGAATAGAGACAGATATAAAGCAACCAACAGTTCCTGCCTCTGGAGAAGAACTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000284322.10
ENST00000469764.1
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CCA 72 bp AAGAGTTTGCAGTTCAGTCAGAGCAAATGTTGTTCCTaGAGCATCAGTACTATGAACAACAGGTTCAAAGCC +
Preference number: 6 (lower is better)
Translates to: KSLQFSQSKCCS*SISTMNNRFKA
Trigger: GGCTTTGAACCTGTTGTTCATAGTACTGATGCTCCAGGAACAACATTTGCTCTGACTGAACTGCAAACTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000471714.6
ENST00000495591.5
CDS CAA 72 bp ATAATTGATTTGGGTGTGACCACCTATTTCTCCAAATaGGACAGGTTCCTGGCGAACTGCTCTGAAATAACC +
Preference number: 6 (lower is better)
Translates to: IIDLGVTTYFSK*DRFLANCSEIT
Trigger: GGTTATTTCAGAGCAGTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGGTGGTCACACCCAAATCAATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CAA 90 bp CCACTGAACATAATTGATTTGGGTGTGACCACCTATTTCTCCAAATaGGACAGGTTCCTGGCGAACTGCTCTGAAATAACCTTCTTTGAT +
Preference number: 6 (lower is better)
Translates to: PLNIIDLGVTTYFSK*DRFLANCSEITFFD
Trigger: ATCAAAGAAGGTTATTTCAGAGCAGTTCGCCAGGAACCTGTCCAATTTGGAGAAATAGGTGGTCACACCCAAATCAATTATGTTCAGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS TCA 72 bp GGTATTGATGTGGACTTTGAGGTTTGGCCTTTTACATaGCATGTTCTCTTCACACCTGGCTTCTTTCATTCA +
Preference number: 6 (lower is better)
Translates to: GIDVDFEVWPFT*HVLFTPGFFHS
Trigger: TGAATGAAAGAAGCCAGGTGTGAAGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS CCA 72 bp AACTTCAAGAGGATGGAGTCACTTGTGGTATTGATGTaGACTTTGAGGTTTGGCCTTTTACCTTTTGGCAAT +
Preference number: 6 (lower is better)
Translates to: NFKRMESLVVLM*TLRFGLLPFGN
Trigger: ATTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTTGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
CDS CAA 72 bp AAGAGGATGGAGTCACTTGTGGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACCTTTTGGCAATTTCTGT +
Preference number: 6 (lower is better)
Translates to: KRMESLVVLMWT*RFGLLPFGNFC
Trigger: ACAGAAATTGCCAAAAGGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000284322.10
ENST00000471714.6
ENST00000475896.5
ENST00000486770.7
ENST00000495063.6
CDS CAA 72 bp TGTAGTCCCACATTCATACCACTGAACATAATTGATTaGGGTGTGACCACCTATTTCTCCAAATTGGACAGG +
Preference number: 6 (lower is better)
Translates to: CSPTFIPLNIID*GVTTYFSKLDR
Trigger: CCTGTCCAATTTGGAGAAATAGGTGGTCACACCCAAATCAATTATGTTCAGTGGTATGAATGTGGGACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5
CDS CAA 72 bp TCCATCCATGCTGTATCACTAGTTCAGTCCTTTTATTaGCTTTTGGCAATTTCTGTGCATTTCCCAGGGCTA +
Preference number: 6 (lower is better)
Translates to: SIHAVSLVQSFY*LLAISVHFPGL
Trigger: TAGCCCTGGGAAATGCACAGAAATTGCCAAAAGCAAATAAAAGGACTGAACTAGTGATACAGCATGGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS CAA 72 bp AAGAGGATGGAGTCACTTGTGGTATTGATGTGGACTTaGAGGTTTGGCCTTTTACATGACATGTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: KRMESLVVLMWT*RFGLLHDMFSS
Trigger: TGAAGAGAACATGTCATGTAAAAGGCCAAACCTCAAAGTCCACATCAATACCACAAGTGACTCCATCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530236.6
CDS TCA 72 bp AGTAAGAAATCAGTATGTATCCATCCAGAGAACATTTaGTTAGTGGTCAGAGAGAGACCAGAGTTTGGTGTC +
Preference number: 6 (lower is better)
Translates to: SKKSVCIHPENI*LVVRERPEFGV
Trigger: GACACCAAACTCTGGTCTCTCTCTGACCACTAATCAAATGTTCTCTGGATGGATACATACTGATTTCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS TCA 72 bp TTAAGCCAAGGATTCATACATTTACCCGATTTGTTCTaGGGTACTTCAGGACTTGATGTAGTTTTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: LSQGFIHLPDLF*GTSGLDVVLGL
Trigger: CAGACCCAAAACTACATCAAGTCCTGAAGTACCTCAGAACAAATCGGGTAAATGTATGAATCCTTGGCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495063.6
CDS CAA 72 bp ATAACTGTTTCCGTAACATTTTGCTCAGAGGAAAACTaGTGTTTACAGCACCCATTCGTGCCTGAAACTCTT +
Preference number: 6 (lower is better)
Translates to: ITVSVTFCSEEN*CLQHPFVPETL
Trigger: AAGAGTTTCAGGCACGAATGGGTGCTGTAAACACAAGTTTTCCTCTGAGCAAAATGTTACGGAAACAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497021.1
CDS CAA 90 bp ACAAACATGGGTGCCATGAAATTCTTGTTTAAAAGCATGACACTTTaGGGGATTCTTCCCAAATTTAGTATGCACAAGACTTCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: TNMGAMKFLFKSMTL*GILPKFSMHKTSQS
Trigger: GCTTTGGGAAGTCTTGTGCATACTAAATTTGGGAAGAATCCCCAAAAGTGTCATGCTTTTAAACAAGAATTTCATGGCACCCATGTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475896.5
CDS TCA 72 bp ATTTGTCATTTGAATGGACTTGTTCTTCCCACTGAATaGCCCATTTTCTCTGGATATAACTTCATATTCAGT +
Preference number: 6 (lower is better)
Translates to: ICHLNGLVLPTE*PIFSGYNFIFS
Trigger: ACTGAATATGAAGTTATATCCAGAGAAAATGGGTCATTCAGTGGGAAGAACAAGTCCATTCAAATGACAAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000284322.10
ENST00000470336.5
ENST00000471714.6
ENST00000486770.7
ENST00000487012.5
ENST00000495591.5