RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABI3 (Homo sapiens)

Ensembl gene IDs: ENSG00000108798

Ensembl transcript IDs: ENST00000225941.6, ENST00000419580.6, ENST00000571035.1, ENST00000573347.5

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGCTCACAGCCCAAGAGGTGGGCAGACCCAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAG +
Preference number: 1 (lower is better)
Translates to: TAHSPRGGQTQSSCD*SWFWLGAHETHSVQ
Trigger: CTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTCTGCCCACCTCTTGGGCTGTGAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR CCA 90 bp CACAGCCCAAGAGGTGGGCAGACCCAGTCCAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCA +
Preference number: 1 (lower is better)
Translates to: HSPRGGQTQSSCDWS*FWLGAHETHSVQTS
Trigger: TGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTCTGCCCACCTCTTGGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR TCA 90 bp CTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: LAAGDPVLHGVGVLC*QTSWFPALPHLQQA
Trigger: GGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR CCA 90 bp GTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCTaGCCCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTT +
Preference number: 1 (lower is better)
Translates to: VISSSLRTGMPFNPS*PLISVGQSQDIICF
Trigger: AAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGGGCCAGGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR CCA 90 bp TTAGAACTGGGATGCCTTTCAATCCCTCCTGGCCCCTTATCTCTGTaGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACT +
Preference number: 1 (lower is better)
Translates to: LELGCLSIPPGPLSL*GSHRTSSVLFKVGT
Trigger: AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGGGCCAGGAGGGATTGAAAGGCATCCCAGTTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR-3UTR TCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGACCCAGTCCAGCTGTaGCTGGAGCTGGTTTTGGCT +
Preference number: 2 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNDPVQL*LELVLA
Trigger: AGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR TCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNLAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp CTGGTGGGTTGGAGGTTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGGGCCCCTTATCTCTGTaGGGCAGTCACAGGACATCA +
Preference number: 2 (lower is better)
Translates to: LVGWRLGAVISSSLRTGMGPLSL*GSHRTS
Trigger: TGATGTCCTGTGACTGCCCCACAGAGATAAGGGGCC...CATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAACCTCCAACCCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR-3UTR TCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCTTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVLAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNSCDWS*FWLGAH
Trigger: ATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCT...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 2 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR TCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGACCCAGTCCAGCTGTaGCTGGAGCTGGTTTTGGCT +
Preference number: 2 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKDPVQL*LELVLA
Trigger: AGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCAGCTCTTCCCCATCTaGAGCAGGCCTCTGGATAAA +
Preference number: 2 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVQLFPI*SRPLDK
Trigger: TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTG...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTCTGCAGCAGGCCTCTaGATAAATTCTCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNSAAGL*INSLSP
Trigger: TGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGA...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCAGACCCTGTCCTGCATaGAGTAGGGGTCCTCTGTTG +
Preference number: 2 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSRPCPA*SRGPLL
Trigger: CAACAGAGGACCCCTACTCCATGCAGGACAGGGTCT...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVMKPTQ*RHQLPR
Trigger: TCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCAT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATACAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAACCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 2 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWISCDWS*FWLGAH
Trigger: ATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR TCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCATTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLALAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR GCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIMKPTQ*RHQLPR
Trigger: TCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCAT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACC +
Preference number: 2 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQDWSWF*LGAHET
Trigger: GGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTC...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR CCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCACAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR CCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCACCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 2 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACC +
Preference number: 2 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAADWSWF*LGAHET
Trigger: GGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTC...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR GCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAMKPTQ*RHQLPR
Trigger: TCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCAT...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR GCA 90 bp ATATTTAATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAATAGATTCACACCTTTaGAGAGGGAGGAGAATGGGG +
Preference number: 2 (lower is better)
Translates to: IFNTRPAALSPVLSVRQKIDSHL*RGRRMG
Trigger: CCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTAT...TTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTATTAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
3UTR-3UTR CCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGTCTGCAGCAGGCCTCTaGATAAATTCTCTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGSAAGL*INSLSP
Trigger: TGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGA...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR-3UTR TCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCA +
Preference number: 2 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAVGVLC*QTSWFP
Trigger: TGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTAC...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR GCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCAGCTCTTCCCCATCTaGAGCAGGCCTCTGGATAAA +
Preference number: 2 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTQLFPI*SRPLDK
Trigger: TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTSCDWS*FWLGAH
Trigger: ATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCT...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR CCA 72 bp AGCCCAAGAGGTGGGCAGACCCAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCAC +
Preference number: 3 (lower is better)
Translates to: SPRGGQTQSSCD*SWFWLGAHETH
Trigger: GTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTCTGCCCACCTCTTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR CCA 72 bp GGGCAGACCCAGTCCAGCTGTGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACCCACTCAGTGCAGACA +
Preference number: 3 (lower is better)
Translates to: GQTQSSCDWSWF*LGAHETHSVQT
Trigger: TGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTCTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR CCA 72 bp AGAGGTGGGCAGACCCAGTCCAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTG +
Preference number: 3 (lower is better)
Translates to: RGGQTQSSCDWS*FWLGAHETHSV
Trigger: CACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTCTGCCCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR TCA 72 bp GGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCAGCTCTTCCCCATCTG +
Preference number: 3 (lower is better)
Translates to: GDPVLHGVGVLC*QTSWFPALPHL
Trigger: CAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CAA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGGAGCTGGTTTTGGCTaGGGGCTCATGAAACCCACT +
Preference number: 3 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIGAGFG*GLMKPT
Trigger: AGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR GCA 72 bp GTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTaGAGCAGGCCTCTGGATAAATTCTCTCTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: VDKLLGFQLFPI*SRPLDKFSLPR
Trigger: CCTGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR CCA 72 bp AAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATaGAGTAGGGGTCCTCTGTTGACAAACTTCTTGGTT +
Preference number: 3 (lower is better)
Translates to: KVGTCSRRPCPA*SRGPLLTNFLV
Trigger: AACCAAGAAGTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
3UTR-3UTR CAA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCGGAGCTGGTTTTGGCTaGGGGCTCATGAAACCCACT +
Preference number: 3 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCGAGFG*GLMKPT
Trigger: AGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCC...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
3UTR CCA 72 bp GGATGCCTTTCAATCCCTCCTGGCCCCTTATCTCTGTaGGGCAGTCACAGGACATCATCTGTTTTATTCAAA +
Preference number: 3 (lower is better)
Translates to: GCLSIPPGPLSL*GSHRTSSVLFK
Trigger: TTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGGGCCAGGAGGGATTGAAAGGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp CAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCAGCGTGGGAGGCCGCTaGAACACCTCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QREENGDQGNRGSGIRCPSVGGR*NTSTAA
Trigger: AGCAGCCGTCGAGGTGTTCCAGCGGCCTCCCACGCT...GGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCTGGGGCTGGAGGTGCTaGCTGCCCCTTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSWGWRC*LPLGRG
Trigger: CCCACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCA...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp AATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTCCCAGAAGTGGTCTCCCCAAGGTaGCGGAGGCGGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NGDQGNRGSGIRCPSVPEVVSPR*RRRVWQ
Trigger: CTGCCACACCCGCCTCCGCCACCTTGGGGAGACCAC...TTCTGGGACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp GGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTGAACACCTCGACGGCTaGTGGTGGAGGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: GGEWGSGQQRKWDPVPLSEHLDG*WWRRWV
Trigger: GACCCACCTCCTCCACCAGCAGCCGTCGAGGTGTTC...ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACATACGGGCTTCCACCTaGCGCAGGGCGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNIRAST*RRAAPC
Trigger: GCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTAT...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCCACCGGCAGGTGCACTaGCTCGGGAATCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSHRQVH*LGNPGW
Trigger: CCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTG...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp CTGCAGGGCAAGAGAAGAGGGTGCCGTGAGATAATGCCTCTTGCCCTCTCCCCCTGCTGGTGGAGGAGGTaGGTCCAAGGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LQGKRRGCREIMPLALSPCWWRR*VQGAGE
Trigger: CTCCCCAGCTCCTTGGACCCACCTCCTCCACCAGCA...GGGGGAGAGGGCAAGAGGCATTATCTCACGGCACCCTCTTCTCTTGCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTCACCTCGACGGCTGCTaGTGGAGGAGGTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GGEWGSGQQRKWDPVPLSHLDGC*WRRWVQ
Trigger: TTGGACCCACCTCCTCCACCAGCAGCCGTCGAGGTG...ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTAGGCCCAAATCCTGGTaGGGGTGGAGGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: GGEWGSGQQRKWDPVPLSRPKSW*GWRQPQ
Trigger: TTGGGGCTGCCTCCACCCCCACCAGGATTTGGGCCT...ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTAAAGGCCGGTGGGGGTaGGGACAACTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: GGEWGSGQQRKWDPVPLSKGRWG*GQLLQR
Trigger: ACGCTGGAGGAGTTGTCCCCACCCCCACCGGCCTTT...ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCAAGCAGAAAGGCCGGTaGGGGTGGGGACAACTCCTC +
Preference number: 4 (lower is better)
Translates to: AEGGEWGSGQQRKWDPVPKQKGR*GWGQLL
Trigger: GAGGAGTTGTCCCCACCCCCACCGGCCTTTCTGCTT...GGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNRRAAP*RSNMRR
Trigger: TCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCA +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWRRRRV*RRAPPA
Trigger: TGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCA +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARRRRV*RRAPPA
Trigger: TGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCTGGGGCTGGAGGTGCTaGCTGCCCCTTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVWGWRC*LPLGRG
Trigger: CCCACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCA...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGCCCCCAGCCTCTGTCTaGCTCCCCAGGGAGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWPPASV*LPREPA
Trigger: AGCGGGCTCCCTGGGGAGCCAGACAGAGGCTGGGGG...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp GGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCCTCAGTGGGCAACAGAGGAAGTaGGATCCGGTGCCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GGEWGSGQQRKWDPVPLSGQQRK*DPVPLS
Trigger: ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCC...ACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR TCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCAGTCCCCTCTGAGCTaGCGCCCTCGCACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNQSPLS*RPRTSH
Trigger: ATGGCTGGTGCGAGGGCGTCAGCTCAGAGGGGACTG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGCAGGGCACTGTGGTTaGCCCTCAGAGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVAGHCG*PSEPPG
Trigger: GCCGGGAGGCTCTGAGGGGCAACCACAGTGCCCTGC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGTGTGCCCGGCCAGGTTaGCCACCTGGTAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWCARPG*PPGRPR
Trigger: GCGTGGCCTACCAGGTGGGCAACCTGGCCGGGCACA...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCTGTGCCCGGCCAGGTTaGCCACCTGGTAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVCARPG*PPGRPR
Trigger: GCGTGGCCTACCAGGTGGGCAACCTGGCCGGGCACA...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGA +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARRAAP*RSNMRR
Trigger: TCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCG...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp ATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTGTGAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCA +
Preference number: 4 (lower is better)
Translates to: IPGQLPSPQFCQFVRKIVRRRRV*RRAPPA
Trigger: TGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCT...CACAATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAGGTGGGGCTGGAGGTaGTGCCTGCCCCTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARWGWR*CLPLGR
Trigger: ACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCACCT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTCACCGGCAGGTGCACTaGCTCGGGAATCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSAHRQVH*LGNPGW
Trigger: CCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTG...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGATCAGGCCCAAATCCTaGTGGGGGTGGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TFAEGGEWGSGQQRKWDPIRPKS*WGWRQP
Trigger: GGGCTGCCTCCACCCCCACCAGGATTTGGGCCTGAT...CGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR TCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGCAGTCCCCTCTGAGCTaGCGCCCTCGCACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWQSPLS*RPRTSH
Trigger: ATGGCTGGTGCGAGGGCGTCAGCTCAGAGGGGACTG...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGAATCCAGTCCCCTCTaGGCTGACGCCCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNESSPL*ADALAP
Trigger: TGGTGCGAGGGCGTCAGCTCAGAGGGGACTGGATTC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp GGCCCGGGGGATAGATTCACACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCGAGAAGAGGGTGCCGTaGGATAATGCCTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: GPGDRFTPLQREENGDQGEKRVP*DNASCP
Trigger: AGGGCAAGAGGCATTATCTCACGGCACCCTCTTCTC...GCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTATCCCCCGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAATGGGGCTGGAGGTGCTaGCTGCCCCTTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKWGWRC*LPLGRG
Trigger: CCCACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCA...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp ATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTGTGAGGTGGGGCTGGAGGTaGTGCCTGCCCCTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: IPGQLPSPQFCQFVRKIVRWGWR*CLPLGR
Trigger: ACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCACCT...CACAATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCGTGGTCTCCCCAAGGTaGCGGAGGCGGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSVVSPR*RRRVWQ
Trigger: CTGCCACACCCGCCTCCGCCACCTTGGGGAGACCAC...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGCTCGGGAATCCGGGGTaGTCTCCCCAAGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWLGNPG*SPQGGG
Trigger: TCCGCCACCTTGGGGAGACCACCCCGGATTCCCGAG...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTGCTGGTGGAGGAGGTaGGTCCAAGGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNCWWRR*VQGAGE
Trigger: CTCCCCAGCTCCTTGGACCCACCTCCTCCACCAGCA...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCACCTCGACGGCTGCTaGTGGAGGAGGTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNHLDGC*WRRWVQ
Trigger: TTGGACCCACCTCCTCCACCAGCAGCCGTCGAGGTG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAGCGTGGGAGGCCGCTaGAACACCTCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVSVGGR*NTSTAA
Trigger: AGCAGCCGTCGAGGTGTTCCAGCGGCCTCCCACGCT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGAGCGTGGGAGGCCGCTaGAACACCTCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWSVGGR*NTSTAA
Trigger: AGCAGCCGTCGAGGTGTTCCAGCGGCCTCCCACGCT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCAGCTCTTCGTCCGGTaGGGGTGGGGACAACTCCTC +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNQLFVR*GWGQLL
Trigger: GAGGAGTTGTCCCCACCCCCACCGGACGAAGAGCTG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCAGGCAGGCACCCAGCTaGGCTCATCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSRQAPS*AHQAQI
Trigger: GATTTGGGCCTGATGAGCCCAGCTGGGTGCCTGCCT...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR TCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGAATCCAGTCCCCTCTaGGCTGACGCCCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVESSPL*ADALAP
Trigger: TGGTGCGAGGGCGTCAGCTCAGAGGGGACTGGATTC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTGAATCCAGTCCCCTCTaGGCTGACGCCCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSAESSPL*ADALAP
Trigger: TGGTGCGAGGGCGTCAGCTCAGAGGGGACTGGATTC...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCACCTTTCTCCAAGTATaGGGCAGGCACCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSTFLQV*GRHPAG
Trigger: CCCAGCTGGGTGCCTGCCTCATACTTGGAGAAAGGT...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGCAGGGCACTGTGGTTaGCCCTCAGAGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIAGHCG*PSEPPG
Trigger: GCCGGGAGGCTCTGAGGGGCAACCACAGTGCCCTGC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCTCTTGGGGGCCTTCTTaGAAGCCTTCAGGACCCCTC +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSSWGPS*KPSGPL
Trigger: GAGGGGTCCTGAAGGCTTGCAAGAAGGCCCCCAAGA...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR GCA 90 bp GGCCCGGGGGATAGATTCACACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCCCACCACCATGGGGATaGACGGTCTCAAGTACTAGA +
Preference number: 4 (lower is better)
Translates to: GPGDRFTPLQREENGDQGPPPWG*TVSSTR
Trigger: TCTAGTACTTGAGACCGTGCATCCCCATGGTGGTGG...GCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTATCCCCCGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGTGGTCTCCCCAAGGTaGCGGAGGCGGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKVVSPR*RRRVWQ
Trigger: CTGCCACACCCGCCTCCGCCACCTTGGGGAGACCAC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp ATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTGTGCTCGGGAATCCGGGGTaGTCTCCCCAAGGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: IPGQLPSPQFCQFVRKIVLGNPG*SPQGGG
Trigger: TCCGCCACCTTGGGGAGACCACCCCGGATTCCCGAG...CACAATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATACACCGGCAGGTGCACTaGCTCGGGAATCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIHRQVH*LGNPGW
Trigger: CCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTG...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTTGCTGGTGGAGGAGGTaGGTCCAAGGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSACWWRR*VQGAGE
Trigger: CTCCCCAGCTCCTTGGACCCACCTCCTCCACCAGCA...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGAGGAGGCAGGTCCAGTaGCAGGGGCAGCTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWRRQVQ*QGQLFV
Trigger: GACGAAGAGCTGCCCCTGCCACTGGACCTGCCTCCT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAGGCCCAAATCCTGGTaGGGGTGGAGGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARPKSW*GWRQPQ
Trigger: TTGGGGCTGCCTCCACCCCCACCAGGATTTGGGCCT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGAGGCCCAAATCCTGGTaGGGGTGGAGGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWRPKSW*GWRQPQ
Trigger: TTGGGGCTGCCTCCACCCCCACCAGGATTTGGGCCT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATCAGGCCCAAATCCTaGTGGGGGTGGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWIRPKS*WGWRQP
Trigger: GGGCTGCCTCCACCCCCACCAGGATTTGGGCCTGAT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAAAGGCCGGTGGGGGTaGGGACAACTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVKGRWG*GQLLQR
Trigger: ACGCTGGAGGAGTTGTCCCCACCCCCACCGGCCTTT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000571035.1
CDS-3UTR CCA 90 bp ACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGCAGAGGGAGGAGAATaGGGATCAGGGCAACAGAGG +
Preference number: 4 (lower is better)
Translates to: TFAEGGEWGSGQQRKWDPAEGGE*GSGQQR
Trigger: CCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGC...CGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR TCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGTCCTGCAGTAGGGCGTaGGAGGGGGTAGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWSCSRA*EGVGSL
Trigger: CAGAGAACCTACCCCCTCTCACGCCCTACTGCAGGA...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTCAGGGTGCCTGTTCTTaGCAGCTGCGTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSAQGACS*QLRAEV
Trigger: GACCTCAGCACGCAGCTGTCAAGAACAGGCACCCTG...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCACTTTCTCCAAGTATaGGGCAGGCACCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNHFLQV*GRHPAG
Trigger: CCCAGCTGGGTGCCTGCCTCATACTTGGAGAAAGTG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCGGCCACGCTGGCCAGTaGCTGGGTAGTGAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSGHAGQ*LGSEGH
Trigger: ATGGCCTTCACTACCCAGGCACTGGCCAGCGTGGCC...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCCCTGCAGGTCCAACATaGGCAGAGTGTGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSPAGPT*AECARP
Trigger: TGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGG...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGCCATCTGGCCCAGCGTaGTTACACGGGCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWPSGPA*LHGLPP
Trigger: AGGTGGAAGCCCGTGTAAGCACGCTGGGCCAGATGG...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCA +
Preference number: 4 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLARRRRV*RRAPPA
Trigger: TGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCT...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGTGGGGCTGGAGGTGCTaGCTGCCCCTTGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGWGWRC*LPLGRG
Trigger: CCCACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCA...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCGCAGCCGCTGGACAGTaGCTAAGGTGCCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSAAAGQ*LRCRSP
Trigger: GGGAGATCGGCACCTTAGCCACTGTCCAGCGGCTGC...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGCACCGGCAGGTGCACTaGCTCGGGAATCCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQHRQVH*LGNPGW
Trigger: CCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTG...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAAGCGTGGGAGGCCGCTaGAACACCTCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKSVGGR*NTSTAA
Trigger: AGCAGCCGTCGAGGTGTTCCAGCGGCCTCCCACGCT...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTGTGAGGAGGCAGGTCCAGTaGCAGGGGCAGCTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: IPGQLPSPQFCQFVRKIVRRQVQ*QGQLFV
Trigger: GACGAAGAGCTGCCCCTGCCACTGGACCTGCCTCCT...CACAATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp GGGGATAGATTCACACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAATCTCCATCCAGGGGTaGAGGAGGAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GDRFTPLQREENGDQGNRISIQG*RRRQVQ
Trigger: CTGGACCTGCCTCCTCCTCCACCCCTGGATGGAGAT...TCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp CACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCAAATCCTGGTGGGGGTaGAGGCAGCCCCAATTCATC +
Preference number: 4 (lower is better)
Translates to: HLCRGRRMGIRATEEVGSKSWWG*RQPQFI
Trigger: GATGAATTGGGGCTGCCTCCACCCCCACCAGGATTT...GGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCAGGCCCAAATCCTGGTaGGGGTGGAGGCAGCCCCAA +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSRPKSW*GWRQPQ
Trigger: TTGGGGCTGCCTCCACCCCCACCAGGATTTGGGCCT...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAGGCAGGCACCCAGCTaGGCTCATCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVRQAPS*AHQAQI
Trigger: GATTTGGGCCTGATGAGCCCAGCTGGGTGCCTGCCT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGAGGCAGGCACCCAGCTaGGCTCATCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWRQAPS*AHQAQI
Trigger: GATTTGGGCCTGATGAGCCCAGCTGGGTGCCTGCCT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTGGGCTGTCAGCAGCTaGGCTCCACATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNWAVSS*APHSSQ
Trigger: CTGGGAACTATGTGGAGCCCAGCTGCTGACAGCCCA...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAAGCAGAAAGGCCGGTaGGGGTGGGGACAACTCCTC +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSAKQKGR*GWGQLL
Trigger: GAGGAGTTGTCCCCACCCCCACCGGCCTTTCTGCTT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000571035.1
CDS-3UTR TCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCTCCTGCAGTAGGGCGTaGGAGGGGGTAGGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSSCSRA*EGVGSL
Trigger: CAGAGAACCTACCCCCTCTCACGCCCTACTGCAGGA...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR TCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGCAGTCCCCTCTGAGCTaGCGCCCTCGCACCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQQSPLS*RPRTSH
Trigger: ATGGCTGGTGCGAGGGCGTCAGCTCAGAGGGGACTG...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGACCCAGTCCAGCTGTaGCTGGAGCTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVDPVQL*LELVLA
Trigger: AGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAAACATGCGCAGAGTGTaGCCGGCCAGGTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKNMRRV*PARLPT
Trigger: GGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTT...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTACACGGGCTTCCACCTaGCGCAGGGCGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTTRAST*RRAAPC
Trigger: GCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTGT...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAAGGTGGGGCTGGAGGTaGTGCCTGCCCCTTGGGCGT +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAARWGWR*CLPLGR
Trigger: ACGCCCAAGGGGCAGGCAGCACCTCCAGCCCCACCT...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGAACACCTCGACGGCTaGTGGTGGAGGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIEHLDG*WWRRWV
Trigger: GACCCACCTCCTCCACCAGCAGCCGTCGAGGTGTTC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGAACACCTCGACGGCTaGTGGTGGAGGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKEHLDG*WWRRWV
Trigger: GACCCACCTCCTCCACCAGCAGCCGTCGAGGTGTTC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAGAGGAAGTCAGTCCTaGTCCCCGAGCCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARGSQS*SPSLCL
Trigger: GAGACACAGGCTCGGGGAGCAGGACTGACTTCCTCT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGCAGCCGCTGGACAGTaGCTAAGGTGCCGATCTCCC +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIAAAGQ*LRCRSP
Trigger: GGGAGATCGGCACCTTAGCCACTGTCCAGCGGCTGC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAACACCTCGACGGCTGCTaGTGGAGGAGGTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKHLDGC*WRRWVQ
Trigger: TTGGACCCACCTCCTCCACCAGCAGCCGTCGAGGTG...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAATTCGTCCGGTGGGGGTaGGGACAACTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKFVRWG*GQLLQR
Trigger: ACGCTGGAGGAGTTGTCCCCACCCCCACCGGACGAA...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATACAGCTCTTCGTCCGGTaGGGGTGGGGACAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIQLFVR*GWGQLL
Trigger: GAGGAGTTGTCCCCACCCCCACCGGACGAAGAGCTG...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAAGGAGGCAGGTCCAGTaGCAGGGGCAGCTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKRRQVQ*QGQLFV
Trigger: GACGAAGAGCTGCCCCTGCCACTGGACCTGCCTCCT...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACAAATCCTGGTGGGGGTaGAGGCAGCCCCAATTCATC +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNKSWWG*RQPQFI
Trigger: GATGAATTGGGGCTGCCTCCACCCCCACCAGGATTT...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGTGGGCTGTCAGCAGCTaGGCTCCACATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWWAVSS*APHSSQ
Trigger: CTGGGAACTATGTGGAGCCCAGCTGCTGACAGCCCA...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGGCCCCTTATCTCTGTaGGGCAGTCACAGGACATCA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNGPLSL*GSHRTS
Trigger: TGATGTCCTGTGACTGCCCCACAGAGATAAGGGGCC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
3UTR CAA 72 bp CCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTTCTaGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAWSRGPLLTNF*VSSSSPSAAGL
Trigger: GAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTACTCCATGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTTTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSALAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGTTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWLAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGTCAAACTCCTGCAGCTaGTGTAGCTCCGCCATCACC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWSNSCS*CSSAIT
Trigger: GGTGATGGCGGAGCTACAGCAGCTGCAGGAGTTTGA...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGCCTTAGAACTGGGATaGCTTTCAATCCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNALELG*LSIPPG
Trigger: GCCAGGAGGGATTGAAAGGCATCCCAGTTCTAAGGC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGGGTCCAATGTGGGCTaGACTTTGTGGGTACTGAGG +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVGSNVG*TLWVLR
Trigger: CCTCAGTACCCACAAAGTGCAGCCCACATTGGACCC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGAGCCTCCCGGCCAGTaGGGATCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIEPPGQ*GSQTPA
Trigger: TGCAGGAGTTTGAGATCCCCACTGGCCGGGAGGCTC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACCCTTCCGCTTGTCTGTaGCCTGCACATAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNPSACL*PAHSCP
Trigger: AGGACAACTATGTGCAGGCCACAGACAAGCGGAAGG...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGTTCGTCCGGTGGGGGTaGGGACAACTCCTCCAGCGT +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQFVRWG*GQLLQR
Trigger: ACGCTGGAGGAGTTGTCCCCACCCCCACCGGACGAA...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAATCTCCATCCAGGGGTaGAGGAGGAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIISIQG*RRRQVQ
Trigger: CTGGACCTGCCTCCTCCTCCACCCCTGGATGGAGAT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAAATCCTGGTGGGGGTaGAGGCAGCCCCAATTCATC +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVKSWWG*RQPQFI
Trigger: GATGAATTGGGGCTGCCTCCACCCCCACCAGGATTT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAAGGCAGGCACCCAGCTaGGCTCATCAGGCCCAAATC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKRQAPS*AHQAQI
Trigger: GATTTGGGCCTGATGAGCCCAGCTGGGTGCCTGCCT...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGGTGGGTTGGAGGTTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACC +
Preference number: 4 (lower is better)
Translates to: LVGWRLGAVISSSLRTGMDWSWF*LGAHET
Trigger: GGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTC...CATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAACCTCCAACCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTAGACCCTGTCCTGCATaGAGTAGGGGTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSARPCPA*SRGPLL
Trigger: CAACAGAGGACCCCTACTCCATGCAGGACAGGGTCT...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAACTGCAGAGGGGTGTCTaGGGTCCAATGTGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKLQRGV*GPMWAA
Trigger: TGCAGCCCACATTGGACCCCAGACACCCCTCTGCAG...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp CTGGTGGGTTGGAGGTTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGACAAGTTGCAGTCAATaGCTGCAGAGGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: LVGWRLGAVISSSLRTGMTSCSQ*LQRGVW
Trigger: CCAGACACCCCTCTGCAGCCATTGACTGCAACTTGT...CATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAACCTCCAACCCACCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGGGCAGCTCTTCGTCTTaGGGGAAAAGCAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWGSSSS*GKSRKA
Trigger: GGCCTTTCTGCTTTTCCCCCAAGACGAAGAGCTGCC...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000571035.1
CDS-3UTR TCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGGTGTGGCAGGGGCCTTaGTGCTCTTTCGAGACAGGG +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQVWQGP*CSFETG
Trigger: CCCTGTCTCGAAAGAGCATCAAGGCCCCTGCCACAC...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAGACCCAGTCCAGCTGTaGCTGGAGCTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIDPVQL*LELVLA
Trigger: AGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTC...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGTCTCACCCTGCCCTTaGTTGGTTGCTCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKVSPCP*LVALPS
Trigger: GGAAGGCAGAGCAACCAATCAAGGGCAGGGTGAGAC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR GCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCTCAAACTCCTGCAGCTaGTGTAGCTCCGCCATCACC +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSSNSCS*CSSAIT
Trigger: GGTGATGGCGGAGCTACAGCAGCTGCAGGAGTTTGA...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAAACATGCGCAGAGTGTaGCCGGCCAGGTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLANMRRV*PARLPT
Trigger: GGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTT...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCACCTGCAGGTCCAACATaGGCAGAGTGTGCCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAPAGPT*AECARP
Trigger: TGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGG...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNMKPTQ*RHQLPR
Trigger: TCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCAT...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TATTTAATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAGGAAGTGGGATCCGGTaGCCCTCAGTCCCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: YLIPGQLPSPQFCQFVRKGSGIR*PSVPEV
Trigger: GACTTCTGGGACTGAGGGGCACCGGATCCCACTTCC...TTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTATTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCAGGTCCTTGATCCCATaGCCAATGTCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSRSLIP*PMSSRQ
Trigger: CTGCCTGGACGACATTGGCCATGGGATCAAGGACCT...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCCACCTCGACGGCTGCTaGTGGAGGAGGTGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCHLDGC*WRRWVQ
Trigger: TTGGACCCACCTCCTCCACCAGCAGCCGTCGAGGTG...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGAGGAGGCAGGTCCAGTaGCAGGGGCAGCTCTTCGTC +
Preference number: 4 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGRRQVQ*QGQLFV
Trigger: GACGAAGAGCTGCCCCTGCCACTGGACCTGCCTCCT...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATATGGGCTGTCAGCAGCTaGGCTCCACATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIWAVSS*APHSSQ
Trigger: CTGGGAACTATGTGGAGCCCAGCTGCTGACAGCCCA...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACC +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWDWSWF*LGAHET
Trigger: GGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTC...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTGACTGGAGCTGGTTTTaGCTTGGGGCTCATGAAACC +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSADWSWF*LGAHET
Trigger: GGTTTCATGAGCCCCAAGCCAAAACCAGCTCCAGTC...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVSCDWS*FWLGAH
Trigger: ATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCCAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR TCA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCCAGGGTGCCTGTTCTTaGCAGCTGCGTGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCQGACS*QLRAEV
Trigger: GACCTCAGCACGCAGCTGTCAAGAACAGGCACCCTG...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAATTGGCTTGGGGCTCATaGAACCCACTCAGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKLAWGS*NPLSAD
Trigger: GTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAA...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCGCCACCTTCTCCATATaGATGTTCACCATCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSATFSI*MFTIWP
Trigger: GGGCCAGATGGTGAACATGCATATGGAGAAGGTGGC...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGGGACAGTGGCTAAGGTaGCGATCTCCCTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGGQWLR*RSPFGP
Trigger: TGGCCCGAAGGGAGATCGGCACCTTAGCCACTGTCC...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGGACAGTGGCTAAGGTaGCGATCTCCCTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAGQWLR*RSPFGP
Trigger: TGGCCCGAAGGGAGATCGGCACCTTAGCCACTGTCC...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWMKPTQ*RHQLPR
Trigger: TCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCAT...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGCTTTTGGTTTCCTCTaGGTGAGACCCAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVAFGFL*VRPKPA
Trigger: AGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCGAGCCTCCCGGCCAGTaGGGATCTCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCEPPGQ*GSQTPA
Trigger: TGCAGGAGTTTGAGATCCCCACTGGCCGGGAGGCTC...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCACGCTGGCCAGTGCCTaGGTAGTGAAGGCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCTLASA*VVKAMV
Trigger: GACCATGGCCTTCACTACCCAGGCACTGGCCAGCGT...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAATCTCCATCCAGGGGTaGAGGAGGAGGCAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAISIQG*RRRQVQ
Trigger: CTGGACCTGCCTCCTCCTCCACCCCTGGATGGAGAT...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAATCCTGGTGGGGGTaGAGGCAGCCCCAATTCATC +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIKSWWG*RQPQFI
Trigger: GATGAATTGGGGCTGCCTCCACCCCCACCAGGATTT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACAGCTCATTGTCCTTCTaGCTGGTGTATGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNSSLSF*LVYGYS
Trigger: ACTGTACCCATACACCAGCCAGAAGGACAATGAGCT...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCAGCTGTGACTGGAGCTaGTTTTGGCTTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSSCDWS*FWLGAH
Trigger: ATGAGCCCCAAGCCAAAACCAGCTCCAGTCACAGCT...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAACAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTTCTGCAGCAGGCCTCTaGATAAATTCTCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: WSWFWLGAHETHSVQTSASAAGL*INSLSP
Trigger: TGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGA...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAAGACCCTGTCCTGCATaGAGTAGGGGTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKRPCPA*SRGPLL
Trigger: CAACAGAGGACCCCTACTCCATGCAGGACAGGGTCT...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAGACCCTGTCCTGCATaGAGTAGGGGTCCTCTGTTG +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIRPCPA*SRGPLL
Trigger: CAACAGAGGACCCCTACTCCATGCAGGACAGGGTCT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGGTCAGCTGGTGGGTTaGAGGTTGGGGGCTGTAATT +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKGQLVG*RLGAVI
Trigger: AATTACAGCCCCCAACCTCCAACCCACCAGCTGACC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR TCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGCACTTTCTCCAAGTATaGGGCAGGCACCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGHFLQV*GRHPAG
Trigger: CCCAGCTGGGTGCCTGCCTCATACTTGGAGAAAGTG...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR TCA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWVGVLC*QTSWFP
Trigger: TGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTAC...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR TCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVVGVLC*QTSWFP
Trigger: TGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTAC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAACCTGTTCTTGACAGCTaGGTGCTGAGGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKPVLDS*VLRSLI
Trigger: GATCAAGGACCTCAGCACGCAGCTGTCAAGAACAGG...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAATCTTTCGAGACAGGGTaGCTGTTCTTGACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKSFETG*LFLTAA
Trigger: CGCAGCTGTCAAGAACAGGCACCCTGTCTCGAAAGA...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTGAACACCTCGACGGCTaGTGGTGGAGGAGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTEHLDG*WWRRWV
Trigger: GACCCACCTCCTCCACCAGCAGCCGTCGAGGTGTTC...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATACAGCTCTTCCCCATCTaGAGCAGGCCTCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIQLFPI*SRPLDK
Trigger: TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTG...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR GCA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGGTTGCAGTCAATGGCTaGAGAGGGGTGTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGVAVNG*RGVSGV
Trigger: GACCCCAGACACCCCTCTGCAGCCATTGACTGCAAC...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGTGCAAAGGGCAGGCATaGTCATTCCGGGACAAGAGG +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQCKGQA*SFRDKR
Trigger: CCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCA...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR GCA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAGACCCAAACCTGCTTaGAAAGGGCAGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIRPKPA*KGQACS
Trigger: TGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTATCAGGCCCAAATCCTaGTGGGGGTGGAGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTIRPKS*WGWRQP
Trigger: GGGCTGCCTCCACCCCCACCAGGATTTGGGCCTGAT...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTTCTGGCTGGTGTATaGGTACAGTGTCACCACTTT +
Preference number: 4 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVLLAGV*VQCHHF
Trigger: AAAGTGGTGACACTGTACCCATACACCAGCCAGAAG...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCACACCCTGCCCTTGATTaGTTGCTCTGCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAHPALD*LLCLPS
Trigger: GGAGGGAAGGCAGAGCAACCAATCAAGGGCAGGGTG...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CCA 90 bp TTAATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTGGCAGCTCTTCGTCTTaGGGGAAAAGCAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LIPGQLPSPQFCQFVRKIGSSSS*GKSRKA
Trigger: GGCCTTTCTGCTTTTCCCCCAAGACGAAGAGCTGCC...AATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573347.5
3UTR CAA 72 bp GGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTaGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: GAVTGHHLFYSK*GLAAGDPVLHG
Trigger: TCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGTTGGTTTCCTCTGCGTaGGACCCAAACCTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQLVSSA*DPNLLA
Trigger: TGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAA...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR GCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGCCTGTTCTTGACAGCTaGGTGCTGAGGTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQPVLDS*VLRSLI
Trigger: GATCAAGGACCTCAGCACGCAGCTGTCAAGAACAGG...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCGGCAAAAGAACAAGTTaGAGTCAATGGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSGKRTS*SQWLQR
Trigger: CCTCTGCAGCCATTGACTGCAACTTGTTCTTTTGCC...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCATGCATGTTCACCATCTaGCCCAGCGTGCTTACACGG +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAACMFTI*PSVLTR
Trigger: CCGTGTAAGCACGCTGGGCCAGATGGTGAACATGCA...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAAGGTCCTTGATCCCATaGCCAATGTCGTCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAARSLIP*PMSSRQ
Trigger: CTGCCTGGACGACATTGGCCATGGGATCAAGGACCT...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCACCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCACCTTTCAATCCCTCCTaGCCCCTTATCTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAPFNPS*PLISVG
Trigger: CCCCACAGAGATAAGGGGCCAGGAGGGATTGAAAGG...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGTCTGGGGTCCAATGTaGGCTGCACTTTGTGGGTAC +
Preference number: 4 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAVWGPM*AALCGY
Trigger: GTACCCACAAAGTGCAGCCCACATTGGACCCCAGAC...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR TCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCACTTTCTCCAAGTATaGGGCAGGCACCCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTHFLQV*GRHPAG
Trigger: CCCAGCTGGGTGCCTGCCTCATACTTGGAGAAAGTG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTGACCCAGTCCAGCTGTaGCTGGAGCTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTDPVQL*LELVLA
Trigger: AGCCAAAACCAGCTCCAGTCACAGCTGGACTGGGTC...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGGCACTTTGTGGGTACTaGGGAAATGGGAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQALCGY*GNGKML
Trigger: CAGCATCTTCCCATTTCCTCAGTACCCACAAAGTGC...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR GCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCACAGCTCTTCCCCATCTaGAGCAGGCCTCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAQLFPI*SRPLDK
Trigger: TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTG...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp GTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGTCTGCAGCAGGCCTCTaGATAAATTCTCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VGQSQDIICFIQSWDLQQSAAGL*INSLSP
Trigger: TGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGA...CTGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR GCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGCCACCTTCTCCATATaGATGTTCACCATACGGGCT +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAATFSI*MFTIRA
Trigger: AGCCCGTATGGTGAACATGCATATGGAGAAGGTGGC...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR GCA 90 bp TTAATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATTATAGATTCACACCTTTaGAGAGGGAGGAGAATGGGG +
Preference number: 4 (lower is better)
Translates to: LIPGQLPSPQFCQFVRKIIDSHL*RGRRMG
Trigger: CCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTAT...AATTTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTATTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCAGTCCAGCTGTGACTaGAGCTGGTTTTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTQSSCD*SWFWLG
Trigger: CCCAAGCCAAAACCAGCTCCAGTCACAGCTGGACTG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCCCTTCTCCCTCCGATaGGAGGAAGGACAGAACACA +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTPFSLR*EEGQNT
Trigger: TGTGTTCTGTCCTTCCTCCCATCGGAGGGAGAAGGG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR TCA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGTAGGGGTCCTCTGTTaGCAAACTTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAVGVLC*QTSWFP
Trigger: TGGAAACCAAGAAGTTTGTCAACAGAGGACCCCTAC...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCCTTCCGCTTGTCTGTaGCCTGCACATAGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTPSACL*PAHSCP
Trigger: AGGACAACTATGTGCAGGCCACAGACAAGCGGAAGG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCACTTCTGGCTGGTGTATaGGTACAGTGTCACCACTTT +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAALLAGV*VQCHHF
Trigger: AAAGTGGTGACACTGTACCCATACACCAGCCAGAAG...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAAGCTCATTGTCCTTCTaGCTGGTGTATGGGTACAGT +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAASSLSF*LVYGYS
Trigger: ACTGTACCCATACACCAGCCAGAAGGACAATGAGCT...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCATGGGTACTGAGGAAATaGGAAGATGCTGCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAWVLRK*EDAASR
Trigger: CCTAGAAGCAGCATCTTCCCATTTCCTCAGTACCCA...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTCTGCAGCAGGCCTCTaGATAAATTCTCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTSAAGL*INSLSP
Trigger: TGGGGAGAGAGAATTTATCCAGAGGCCTGCTGCAGA...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCTTCTGGCTGGTGTATaGGTACAGTGTCACCACTTT +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTLLAGV*VQCHHF
Trigger: AAAGTGGTGACACTGTACCCATACACCAGCCAGAAG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CCA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTCCCTCTTATTGCTTTTaGTTTCCTCTGCGTGAGACC +
Preference number: 4 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTPSYCF*FPLRET
Trigger: GGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGGG...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 90 bp GCAGAGGAGGCGGCGGAGAGTCTGCCGTCGGGCACCACCGGCAGGTaGACTGGCTCGGGAATCCGGGGTGGTCTCCCCAAGGTGGCGGAG +
Preference number: 5 (lower is better)
Translates to: AEEAAESLPSGTTGR*TGSGIRGGLPKVAE
Trigger: CTCCGCCACCTTGGGGAGACCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCTCCTCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000573347.5
CDS GCA 90 bp TGCCGGCCGAGGCCAGGGAAAACGCAGAGGAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCAGGTGCACTGGCTCGGGAATCCGGG +
Preference number: 5 (lower is better)
Translates to: CRPRPGKTQRRRRRV*RRAPPAGALARESG
Trigger: CCCGGATTCCCGAGCCAGTGCACCTGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCTCCTCTGCGTTTTCCCTGGCCTCGGCCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
ENST00000573347.5
CDS GCA 90 bp CCCAGCGTGCTTACACGGGCTTCCACCTGCCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGAGTGTGCCCGGCCAGGTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: PSVLTRASTCRRAAP*RSNMRRVCPARLPT
Trigger: GGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTGTAAGCACGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS CCA 90 bp AGGAGGCAGGTCCAGTGGCAGGGGCAGCTCTTCGTCCGGTGGGGGTaGGGACAACTCCTCCAGCGTGGGAGGCCGCTGGAACACCTCGAC +
Preference number: 5 (lower is better)
Translates to: RRQVQWQGQLFVRWG*GQLLQRGRPLEHLD
Trigger: GTCGAGGTGTTCCAGCGGCCTCCCACGCTGGAGGAGTTGTCCCCACCCCCACCGGACGAAGAGCTGCCCCTGCCACTGGACCTGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 90 bp TGCATGTTCACCATACGGGCTTCCACCTGCCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGAGTGTGCCCGGCCAGGTTGCCCACC +
Preference number: 5 (lower is better)
Translates to: CMFTIRASTCRRAAP*RSNMRRVCPARLPT
Trigger: GGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTATGGTGAACATGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 90 bp AGTGTGCCCGGCCAGGTTGCCCACCTGGTAGGCCACGCTGGCCAGTaGCTGGGTAGTGAAGGCCATGGTCTCCTCCAGCGCCTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: SVPGQVAHLVGHAGQ*LGSEGHGLLQRLPL
Trigger: AAGCGGAAGGCGCTGGAGGAGACCATGGCCTTCACTACCCAGGCACTGGCCAGCGTGGCCTACCAGGTGGGCAACCTGGCCGGGCACACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 90 bp TGCATGTTCACCATCTGGCCCAGCGTGCTTACACGGGCTTCCACCTaGCGCAGGGCGGCCCCCTGCAGGTCCAACATGCGCAGAGTGTGC +
Preference number: 5 (lower is better)
Translates to: CMFTIWPSVLTRAST*RRAAPCRSNMRRVC
Trigger: GCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTGTAAGCACGCTGGGCCAGATGGTGAACATGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS GCA 90 bp AGTTGTCCTCGCAGTAGTCAGCGACCCGCAGCAGGGCACTGTGGTTaGCCCTCAGAGCCTCCCGGCCAGTGGGGATCTCAAACTCCTGCA +
Preference number: 5 (lower is better)
Translates to: SCPRSSQRPAAGHCG*PSEPPGQWGSQTPA
Trigger: TGCAGGAGTTTGAGATCCCCACTGGCCGGGAGGCTCTGAGGGGCAACCACAGTGCCCTGCTGCGGGTCGCTGACTACTGCGAGGACAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 90 bp GCAAAGGGCAGGCATGCTCATTCCGGGACAAGAGGAAGTCAGTCCTaGTCCCCGAGCCTGTGTCTCTCTGTCCCCTGCCCAGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: AKGRHAHSGTRGSQS*SPSLCLSVPCPEEG
Trigger: CCCTTCCTCTGGGCAGGGGACAGAGAGACACAGGCTCGGGGAGCAGGACTGACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CAA 90 bp GCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTGCCCACTCTAGGGGCCATCTaGGGGGCCTTCTTGCAAGCC +
Preference number: 5 (lower is better)
Translates to: AEGGEWGSGQQRKWDPVPTLGAI*GAFLQA
Trigger: GGCTTGCAAGAAGGCCCCCAAGATGGCCCCTAGAGT...GGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CAA 90 bp CTGCAGGGCAAGAGAAGAGGGTGCCGTGAGATAATGCCTCTTGCCCTCTCCCCCGGTGTGGCAGGGGCCTaGATGCTCTTTCGAGACAGG +
Preference number: 5 (lower is better)
Translates to: LQGKRRGCREIMPLALSPGVAGA*MLFRDR
Trigger: CCTGTCTCGAAAGAGCATCAAGGCCCCTGCCACACC...GGGGGAGAGGGCAAGAGGCATTATCTCACGGCACCCTCTTCTCTTGCCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS GCA 90 bp GGTTTCCTCTGCGTGAGACCCAAACCTGCTTGCAAAGGGCAGGCATaGTCATTCCGGGACAAGAGGAAGTCAGTCCTGCTCCCCGAGCCT +
Preference number: 5 (lower is better)
Translates to: GFLCVRPKPACKGQA*SFRDKRKSVLLPEP
Trigger: AGGCTCGGGGAGCAGGACTGACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CCA 90 bp ACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTaGGATCCGGTGCCCCTCAGTCCCAGAAGTCAGGTACCTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TFAEGGEWGSGQQRK*DPVPLSPRSQVPFS
Trigger: GGAGAAAGGTACCTGACTTCTGGGACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CAA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCGGGAGCCCGCTCGTTTaGAGTCTCACCCTGCCCTTG +
Preference number: 5 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVGSPLV*SLTLPL
Trigger: CAAGGGCAGGGTGAGACTCAAAACGAGCGGGCTCCC...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 90 bp AGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTaGCCCTCAGTCCCAGAAGTCAGGTACCTTTCTCCAAGTATGAGG +
Preference number: 5 (lower is better)
Translates to: REENGDQGNRGSGIR*PSVPEVRYLSPSMR
Trigger: CCTCATACTTGGAGAAAGGTACCTGACTTCTGGGACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CAA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACTGCGTGCTGAGGTCCTaGATCCCATGGCCAATGTCG +
Preference number: 5 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNCVLRS*IPWPMS
Trigger: CGACATTGGCCATGGGATCAAGGACCTCAGCACGCA...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp TGGAGCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTGCAGACATCAGCTGGTGTGGCAGGGGCCTaGATGCTCTTTCGAGACAGG +
Preference number: 5 (lower is better)
Translates to: WSWFWLGAHETHSVQTSAGVAGA*MLFRDR
Trigger: CCTGTCTCGAAAGAGCATCAAGGCCCCTGCCACACC...AGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGAGACCCAAACCTGCTaGCAAAGGGCAGGCATGCTC +
Preference number: 5 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNETQTC*QRAGML
Trigger: GAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 90 bp CCAGGGAGCCCGCTCGTTTTGAGTCTCACCCTGCCCTTGATTGGTTaGTCTGCCTTCCCTCCCTCTTATTGCTTTTGGTTTCCTCTGCGT +
Preference number: 5 (lower is better)
Translates to: PGSPLVLSLTLPLIG*SAFPPSYCFWFPLR
Trigger: ACGCAGAGGAAACCAAAAGCAATAAGAGGGAGGGAAGGCAGAGCAACCAATCAAGGGCAGGGTGAGACTCAAAACGAGCGGGCTCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CAA 90 bp GGGGATAGATTCACACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGGCAGCTCTTCGTCTaGGGGGAAAAGCAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: GDRFTPLQREENGDQGNRGQLFV*GEKQKG
Trigger: GCCTTTCTGCTTTTCCCCCAAGACGAAGAGCTGCCC...TCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTATCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CAA 90 bp TTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCCTTTCAATCCCTCCTGCGTGCTGAGGTCCTaGATCCCATGGCCAATGTCG +
Preference number: 5 (lower is better)
Translates to: LGAVISSSLRTGMPFNPSCVLRS*IPWPMS
Trigger: CGACATTGGCCATGGGATCAAGGACCTCAGCACGCA...GGAGGGATTGAAAGGCATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGGGAGCTGGTTTTGGCTaGGGGCTCATGAAACCCACT +
Preference number: 5 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWGAGFG*GLMKPT
Trigger: AGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCC...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp ACCTTTGCAGAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGATAGATTCACACCTTaGCAGAGGGAGGAGAATGGG +
Preference number: 5 (lower is better)
Translates to: TFAEGGEWGSGQQRKWDPDRFTP*QREENG
Trigger: CCCATTCTCCTCCCTCTGCAAAGGTGTGAATCTATC...CGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTCTGCAAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS GCA 90 bp CCTCCCTCTTATTGCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTaGTTGCAAAGGGCAGGCATGCTCATTCCGGGACAAGAGGAAGTC +
Preference number: 5 (lower is better)
Translates to: PPSYCFWFPLRETQT*LQRAGMLIPGQEEV
Trigger: GACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CAA 90 bp ACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTCTGTTGACAAACGAGAAGGAGAGCTCATaGTCCTTCTGGCTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: TCSRRPCPAWSRGPLLTNEKESS*SFWLVY
Trigger: ATACACCAGCCAGAAGGACAATGAGCTCTCCTTCTC...GTTTGTCAACAGAGGACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCATTCAAAGTTGGGACTaGCAGCAGGAGACCCTGTCC +
Preference number: 5 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVIQSWD*QQETLS
Trigger: GGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAAT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATACTGGTGGGTTGGAGGTaGGGGGCTGTAATTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWILVGWR*GAVISS
Trigger: GCTGCTAATTACAGCCCCCAACCTCCAACCCACCAG...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp GACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAAAGGGCAGCTCTTCGTCTaGGGGGAAAAGCAGAAAGGC +
Preference number: 5 (lower is better)
Translates to: DKLLGFQLFPICSRPLDKGQLFV*GEKQKG
Trigger: GCCTTTCTGCTTTTCCCCCAAGACGAAGAGCTGCCC...TTTATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000571035.1
CDS GCA 90 bp CCTCTTATTGCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTGCTTaGAAAGGGCAGGCATGCTCATTCCGGGACAAGAGGAAGTCAGTC +
Preference number: 5 (lower is better)
Translates to: PLIAFGFLCVRPKPA*KGQACSFRDKRKSV
Trigger: GACTGACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CAA 90 bp CTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGGTGTGGCAGGGGCCTaGATGCTCTTTCGAGACAGG +
Preference number: 5 (lower is better)
Translates to: LCGAVTGHHLFYSKLGLAGVAGA*MLFRDR
Trigger: CCTGTCTCGAAAGAGCATCAAGGCCCCTGCCACACC...TGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCAATGTGGGCTGCACTTaGTGGGTACTGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVNVGCT*WVLRKW
Trigger: CCATTTCCTCAGTACCCACAAAGTGCAGCCCACATT...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp TATTTAATACCAGGCCAGCTGCCCTCTCCCCAGTTCTGTCAGTTCGTCAGAAAAATCTTGGGGGCCTTCTaGCAAGCCTTCAGGACCCCT +
Preference number: 5 (lower is better)
Translates to: YLIPGQLPSPQFCQFVRKILGAF*QAFRTP
Trigger: AGGGGTCCTGAAGGCTTGCAAGAAGGCCCCCAAGAT...TTTTCTGACGAACTGACAGAACTGGGGAGAGGGCAGCTGGCCTGGTATTAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS-3UTR CAA 90 bp TTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGATAATTCAAAGTTGGGACTaGCAGCAGGAGACCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LTNFLVSSSSPSAAGLWIIQSWD*QQETLS
Trigger: GGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAAT...TATCCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp CTGGTGGGTTGGAGGTTGGGGGCTGTAATTAGCAGCAGCCTTAGAACTGGGATGCTGTTTTATTCAAAGTaGGGACTTGCAGCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LVGWRLGAVISSSLRTGMLFYSK*GLAAGD
Trigger: GTCTCCTGCTGCAAGTCCCAACTTTGAATAAAACAG...CATCCCAGTTCTAAGGCTGCTGCTAATTACAGCCCCCAACCTCCAACCCACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGGTCAGCTGGTGGGTaGGAGGTTGGGGGCTGTAAT +
Preference number: 5 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCRSAGG*EVGGCN
Trigger: ATTACAGCCCCCAACCTCCAACCCACCAGCTGACCT...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp CTGTTGACAAACTTCTTGGTTTCCAGCTCTTCCCCATCTGCAGCAGGCCTCTGGCTGTTTTATTCAAAGTaGGGACTTGCAGCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LLTNFLVSSSSPSAAGLWLFYSK*GLAAGD
Trigger: GTCTCCTGCTGCAAGTCCCAACTTTGAATAAAACAG...CCAGAGGCCTGCTGCAGATGGGGAAGAGCTGGAAACCAAGAAGTTTGTCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp TATTCAAAGTTGGGACTTGCAGCAGGAGACCCTGTCCTGCATGGAGTAGGGGTCCTGTTTTATTCAAAGTaGGGACTTGCAGCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: YSKLGLAAGDPVLHGVGVLFYSK*GLAAGD
Trigger: GTCTCCTGCTGCAAGTCCCAACTTTGAATAAAACAG...GACCCCTACTCCATGCAGGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS-3UTR CAA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGTCTCACCCTGCCCTaGATTGGTTGCTCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCSLTLP*IGCSAF
Trigger: GAAGGCAGAGCAACCAATCAAGGGCAGGGTGAGACT...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS-3UTR CAA 90 bp TCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCATTCAAAGTTGGGACTaGCAGCAGGAGACCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SLWGSHRTSSVLFKVGTCIQSWD*QQETLS
Trigger: GGACAGGGTCTCCTGCTGCAAGTCCCAACTTTGAAT...GCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp TGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTTGCAGCAGAGAAGGAGAGCTCATaGTCCTTCTGGCTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: CGAVTGHHLFYSKLGLAAEKESS*SFWLVY
Trigger: ATACACCAGCCAGAAGGACAATGAGCTCTCCTTCTC...TGCTGCAAGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTGGAGCTGGTTTTGGCTaGGGGCTCATGAAACCCACT +
Preference number: 5 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTGAGFG*GLMKPT
Trigger: AGTGGGTTTCATGAGCCCCAAGCCAAAACCAGCTCC...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS-3UTR CAA 90 bp CCCTTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGGGGCAAAAGAACAAGTaGCAGTCAATGGCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLSLWGSHRTSSVLFKVGGQKNK*QSMAAE
Trigger: CTCTGCAGCCATTGACTGCAACTTGTTCTTTTGCCC...CCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAAGGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS-3UTR CAA 90 bp TTATCTCTGTGGGGCAGTCACAGGACATCATCTGTTTTATTCAAAGTTGGGACTGAGAAGGAGAGCTCATaGTCCTTCTGGCTGGTGTAT +
Preference number: 5 (lower is better)
Translates to: LSLWGSHRTSSVLFKVGTEKESS*SFWLVY
Trigger: ATACACCAGCCAGAAGGACAATGAGCTCTCCTTCTC...AGTCCCAACTTTGAATAAAACAGATGATGTCCTGTGACTGCCCCACAGAGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp CCACCTGCCGCAGGGCGGCCCCCTGCAGGTCCAACATaGGCAGAGTGTGCCCGGCCAGGTTGCCCACCTGGT +
Preference number: 6 (lower is better)
Translates to: PPAAGRPPAGPT*AECARPGCPPG
Trigger: ACCAGGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp GCGGCGGAGAGTCTGCCGTCGGGCACCACCGGCAGGTaGACTGGCTCGGGAATCCGGGGTGGTCTCCCCAAG +
Preference number: 6 (lower is better)
Translates to: AAESLPSGTTGR*TGSGIRGGLPK
Trigger: CTTGGGGAGACCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000573347.5
CDS GCA 72 bp CTTACACGGGCTTCCACCTGCCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGAGTGTGCCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: LTRASTCRRAAP*RSNMRRVCPAR
Trigger: CCTGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTGTAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS GCA 72 bp AGGCCAGGGAAAACGCAGAGGAGGCGGCGGAGAGTCTaGCGTCGGGCACCACCGGCAGGTGCACTGGCTCGG +
Preference number: 6 (lower is better)
Translates to: RPGKTQRRRRRV*RRAPPAGALAR
Trigger: CCGAGCCAGTGCACCTGCCGGTGGTGCCCGACGGCAGACTCTCCGCCGCCTCCTCTGCGTTTTCCCTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
ENST00000573347.5
CDS GCA 72 bp ACCATACGGGCTTCCACCTGCCGCAGGGCGGCCCCCTaGAGGTCCAACATGCGCAGAGTGTGCCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: TIRASTCRRAAP*RSNMRRVCPAR
Trigger: CCTGGCCGGGCACACTCTGCGCATGTTGGACCTGCAGGGGGCCGCCCTGCGGCAGGTGGAAGCCCGTATGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CCA 72 bp GGAGAGTCTGCCGTCGGGCACCACCGGCAGGTGCACTaGCTCGGGAATCCGGGGTGGTCTCCCCAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GESAVGHHRQVH*LGNPGWSPQGG
Trigger: GCCACCTTGGGGAGACCACCCCGGATTCCCGAGCCAGTGCACCTGCCGGTGGTGCCCGACGGCAGACTCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000573347.5
CDS CCA 72 bp GGGGGTGGGGACAACTCCTCCAGCGTGGGAGGCCGCTaGAACACCTCGACGGCTGCTGGTGGAGGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: GGGDNSSSVGGR*NTSTAAGGGGG
Trigger: CCCACCTCCTCCACCAGCAGCCGTCGAGGTGTTCCAGCGGCCTCCCACGCTGGAGGAGTTGTCCCCACCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
ENST00000573347.5
CDS GCA 72 bp GCAGGTCCAACATGCGCAGAGTGTGCCCGGCCAGGTTaGCCACCTGGTAGGCCACGCTGGCCAGTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: AGPTCAECARPG*PPGRPRWPVPG
Trigger: CCCAGGCACTGGCCAGCGTGGCCTACCAGGTGGGCAACCTGGCCGGGCACACTCTGCGCATGTTGGACCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp GGCCAGGTTGCCCACCTGGTAGGCCACGCTGGCCAGTaGCTGGGTAGTGAAGGCCATGGTCTCCTCCAGCGC +
Preference number: 6 (lower is better)
Translates to: GQVAHLVGHAGQ*LGSEGHGLLQR
Trigger: GCGCTGGAGGAGACCATGGCCTTCACTACCCAGGCACTGGCCAGCGTGGCCTACCAGGTGGGCAACCTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp CGCAGTAGTCAGCGACCCGCAGCAGGGCACTGTGGTTaGCCCTCAGAGCCTCCCGGCCAGTGGGGATCTCAA +
Preference number: 6 (lower is better)
Translates to: RSSQRPAAGHCG*PSEPPGQWGSQ
Trigger: TTGAGATCCCCACTGGCCGGGAGGCTCTGAGGGGCAACCACAGTGCCCTGCTGCGGGTCGCTGACTACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp GCCTCCCGGCCAGTGGGGATCTCAAACTCCTGCAGCTaGTGTAGCTCCGCCATCACCCCCAGCCTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: ASRPVGISNSCS*CSSAITPSLCL
Trigger: CAGACAGAGGCTGGGGGTGATGGCGGAGCTACAGCAGCTGCAGGAGTTTGAGATCCCCACTGGCCGGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CCA 72 bp GGGCACTGTGGTTGCCCCTCAGAGCCTCCCGGCCAGTaGGGATCTCAAACTCCTGCAGCTGCTGTAGCTCCG +
Preference number: 6 (lower is better)
Translates to: GHCGCPSEPPGQ*GSQTPAAAVAP
Trigger: CGGAGCTACAGCAGCTGCAGGAGTTTGAGATCCCCACTGGCCGGGAGGCTCTGAGGGGCAACCACAGTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS TCA 72 bp CATAGTTCCCAGGGAAGAATCCAGTCCCCTCTGAGCTaGCGCCCTCGCACCAGCCATCGGAGTAGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: HSSQGRIQSPLS*RPRTSHRSSGE
Trigger: CTCGCCGCTACTCCGATGGCTGGTGCGAGGGCGTCAGCTCAGAGGGGACTGGATTCTTCCCTGGGAACTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS GCA 72 bp AGGCATGCTCATTCCGGGACAAGAGGAAGTCAGTCCTaGTCCCCGAGCCTGTGTCTCTCTGTCCCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: RHAHSGTRGSQS*SPSLCLSVPCP
Trigger: TGGGCAGGGGACAGAGAGACACAGGCTCGGGGAGCAGGACTGACTTCCTCTTGTCCCGGAATGAGCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 72 bp GCTGGTTTTGGCTTGGGGCTCATGAAACCCACTCAGTaGAGACATCAGCTGCCCAGAGAGCCCTGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: AGFGLGLMKPTQ*RHQLPREPWAV
Trigger: GACAGCCCAGGGCTCTCTGGGCAGCTGATGTCTGCACTGAGTGGGTTTCATGAGCCCCAAGCCAAAACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS GCA 72 bp AAGGTGCCGATCTCCCTTCGGGCCACCTTCTCCATATaGATGTTCACCATACGGGCTTCCACCTGCCGCAGG +
Preference number: 6 (lower is better)
Translates to: KVPISLRATFSI*MFTIRASTCRR
Trigger: CCTGCGGCAGGTGGAAGCCCGTATGGTGAACATGCATATGGAGAAGGTGGCCCGAAGGGAGATCGGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CCA 72 bp GAGGGAGGAGAATGGGGATCAGGGCAACAGAGGAAGTaGGATCCGGTGCCCCTCAGTCCCAGAAGTCAGGTA +
Preference number: 6 (lower is better)
Translates to: EGGEWGSGQQRK*DPVPLSPRSQV
Trigger: TACCTGACTTCTGGGACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATTCTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS TCA 72 bp GGCCTTGATGCTCTTTCGAGACAGGGTGCCTGTTCTTaGCAGCTGCGTGCTGAGGTCCTTGATCCCATGGCC +
Preference number: 6 (lower is better)
Translates to: GLDALSRQGACS*QLRAEVLDPMA
Trigger: GGCCATGGGATCAAGGACCTCAGCACGCAGCTGTCAAGAACAGGCACCCTGTCTCGAAAGAGCATCAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp AAGGTGCCGATCTCCCTTCGGGCCACCTTCTCCATATaGATGTTCACCATCTGGCCCAGCGTGCTTACACGG +
Preference number: 6 (lower is better)
Translates to: KVPISLRATFSI*MFTIWPSVLTR
Trigger: CCGTGTAAGCACGCTGGGCCAGATGGTGAACATGCATATGGAGAAGGTGGCCCGAAGGGAGATCGGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225941.6
CDS CAA 72 bp CCAGGGAGCCCGCTCGTTTTGAGTCTCACCCTGCCCTaGATTGGTTGCTCTGCCTTCCCTCCCTCTTATTGC +
Preference number: 6 (lower is better)
Translates to: PGSPLVLSLTLP*IGCSAFPPSYC
Trigger: GCAATAAGAGGGAGGGAAGGCAGAGCAACCAATCAAGGGCAGGGTGAGACTCAAAACGAGCGGGCTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS TCA 72 bp CCTCAGTCCCAGAAGTCAGGTACCTTTCTCCAAGTATaGGGCAGGCACCCAGCTGGGCTCATCAGGCCCAAA +
Preference number: 6 (lower is better)
Translates to: PQSQKSGTFLQV*GRHPAGLIRPK
Trigger: TTTGGGCCTGATGAGCCCAGCTGGGTGCCTGCCTCATACTTGGAGAAAGGTACCTGACTTCTGGGACTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS GCA 72 bp TGCGTGAGACCCAAACCTGCTTGCAAAGGGCAGGCATaGTCATTCCGGGACAAGAGGAAGTCAGTCCTGCTC +
Preference number: 6 (lower is better)
Translates to: CVRPKPACKGQA*SFRDKRKSVLL
Trigger: GAGCAGGACTGACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 72 bp AATGGGGATCAGGGCAACAGAGGAAGTGGGATCCGGTaGCCCTCAGTCCCAGAAGTCAGGTACCTTTCTCCA +
Preference number: 6 (lower is better)
Translates to: NGDQGNRGSGIR*PSVPEVRYLSP
Trigger: TGGAGAAAGGTACCTGACTTCTGGGACTGAGGGGCACCGGATCCCACTTCCTCTGTTGCCCTGATCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573347.5
CDS GCA 72 bp ATGCTCTTTCGAGACAGGGTGCCTGTTCTTGACAGCTaGGTGCTGAGGTCCTTGATCCCATGGCCAATGTCG +
Preference number: 6 (lower is better)
Translates to: MLFRDRVPVLDS*VLRSLIPWPMS
Trigger: CGACATTGGCCATGGGATCAAGGACCTCAGCACGCAGCTGTCAAGAACAGGCACCCTGTCTCGAAAGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000225941.6
ENST00000419580.6
CDS GCA 72 bp GCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTGCTTaGAAAGGGCAGGCATGCTCATTCCGGGACAAGAGG +
Preference number: 6 (lower is better)
Translates to: AFGFLCVRPKPA*KGQACSFRDKR
Trigger: CCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 72 bp CTGCCTTCCCTCCCTCTTATTGCTTTTGGTTTCCTCTaGGTGAGACCCAAACCTGCTTGCAAAGGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: LPSLPLIAFGFL*VRPKPACKGQA
Trigger: TGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGGGAGGGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CAA 72 bp TGCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTGCTaGCAAAGGGCAGGCATGCTCATTCCGGGACAAGAG +
Preference number: 6 (lower is better)
Translates to: CFWFPLRETQTC*QRAGMLIPGQE
Trigger: CTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS TCA 72 bp CTTCCCTCCCTCTTATTGCTTTTGGTTTCCTCTGCGTaGGACCCAAACCTGCTTGCAAAGGGCAGGCATGCT +
Preference number: 6 (lower is better)
Translates to: LPSLLLLLVSSA*DPNLLAKGRHA
Trigger: AGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGGGAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS CAA 72 bp ACACAGATGACAGTGCCCTCAGAGAAGGAGAGCTCATaGTCCTTCTGGCTGGTGTATGGGTACAGTGTCACC +
Preference number: 6 (lower is better)
Translates to: TQMTVPSEKESS*SFWLVYGYSVT
Trigger: GGTGACACTGTACCCATACACCAGCCAGAAGGACAATGAGCTCTCCTTCTCTGAGGGCACTGTCATCTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000225941.6
ENST00000419580.6
ENST00000571035.1
CDS CAA 90 bp CCCTCTTATTGCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTGCTaGCAAAGGGCAGGCATGCTCATTCCGGGACAAGAGGAAGTCAGT +
Preference number: 6 (lower is better)
Translates to: PSYCFWFPLRETQTC*QRAGMLIPGQEEVS
Trigger: ACTGACTTCCTCTTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATAAGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6
CDS GCA 72 bp TATTGCTTTTGGTTTCCTCTGCGTGAGACCCAAACCTaGTTGCAAAGGGCAGGCATGCTCATTCCGGGACAA +
Preference number: 6 (lower is better)
Translates to: YCFWFPLRETQT*LQRAGMLIPGQ
Trigger: TTGTCCCGGAATGAGCATGCCTGCCCTTTGCAAGCAGGTTTGGGTCTCACGCAGAGGAAACCAAAAGCAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419580.6