RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABI2 (Homo sapiens)

Ensembl gene IDs: ENSG00000138443

Ensembl transcript IDs: ENST00000261016.11, ENST00000261017.9, ENST00000261018.12, ENST00000295851.10, ENST00000413635.5, ENST00000416001.5, ENST00000416396.5, ENST00000422511.6, ENST00000424558.5, ENST00000425253.1, ENST00000430418.5, ENST00000431886.5, ENST00000441061.5, ENST00000444584.1, ENST00000447762.5, ENST00000451591.6, ENST00000454023.1, ENST00000464761.1

Found 1234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCTTAGTGTCCAGCCTGGATTCCTGGCTGACCTCAACAGGACACTaGAACGAAAGTCCATCACTCGGCACGGCTCACTCTCCTCCCGCA +
Preference number: 1 (lower is better)
Translates to: ALVSSLDSWLTSTGH*NESPSLGTAHSPPA
Trigger: TGCGGGAGGAGAGTGAGCCGTGCCGAGTGATGGACTTTCGTTGCAGTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGACACTAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp GCTCACTCTCCTCCCGCATGTCCAGAGCAGAACCAACAGCCACCATaGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTCTG +
Preference number: 1 (lower is better)
Translates to: AHSPPACPEQNQQPP*MIWHCLHHPLNCCL
Trigger: CAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACATGCGGGAGGAGAGTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp GGTTGGGCTAGGTACGTAATCATTTGGTACCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGGGGAGTGCCGCCCAAGTGTCCCTTT +
Preference number: 1 (lower is better)
Translates to: GWARYVIIWYHWRTH*LQCAIGGVPPKCPF
Trigger: AAAGGGACACTTGGGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CCA 90 bp AGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAGTGTGCGATAGGGGGAGTGCCGCCC +
Preference number: 1 (lower is better)
Translates to: SHITGWARYVIIWYH*RTHWLQCAIGGVPP
Trigger: GGGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR GCA 90 bp CTGAAAGGTAAACTGGAGCCATCACATCTCCCCTTGGAAGTCCAGTaGTCAGAGGACCGCCACAGAGGGTTCCATGTAGGGCAGGCTGTG +
Preference number: 1 (lower is better)
Translates to: LKGKLEPSHLPLEVQ*SEDRHRGFHVGQAV
Trigger: CACAGCCTGCCCTACATGGAACCCTCTGTGGCGGTCCTCTGAGCACTGGACTTCCAAGGGGAGATGTGATGGCTCCAGTTTACCTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp AGTGCCAGCAGAGCCAGCAGGGGCTGGAAAGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGGAACCCCCACACTACCACTTCCACT +
Preference number: 1 (lower is better)
Translates to: SASRASRGWKDTGRR*SRNSNRNPHTTTST
Trigger: AGTGGAAGTGGTAGTGTGGGGGTTCCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCTGCTGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR CCA 90 bp TGCCCACCTCTCCCAAATCCAGCCTTAGTGTCCAGCCTGGATTCCTaGCTGACCTCAACAGGACACTGCAACGAAAGTCCATCACTCGGC +
Preference number: 1 (lower is better)
Translates to: CPPLPNPALVSSLDS*LTSTGHCNESPSLG
Trigger: GCCGAGTGATGGACTTTCGTTGCAGTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGACACTAAGGCTGGATTTGGGAGAGGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp CTGCGAGGGAGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCACTGGCTCCAGTGTGCGATAGGGGGA +
Preference number: 1 (lower is better)
Translates to: LRGSHITGWARYVII*YHWRTHWLQCAIGG
Trigger: TCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CCA 90 bp AGCTGTCCTCACAGGGCTCTGCTGCGAGGGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATTTGGTACCACTGGAGGACGCACTGG +
Preference number: 1 (lower is better)
Translates to: SCPHRALLRGSHITG*ARYVIIWYHWRTHW
Trigger: CCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR TCA 90 bp GGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTaGGTAGAACCCACGTTAGCAGCTCTGGACCTGAACAGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: GQLPGKALFWPSHWD*VEPTLAALDLNRSW
Trigger: CCAGCTCCTGTTCAGGTCCAGAGCTGCTAACGTGGGTTCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 90 bp TTTCTGACACCCAGCCAGCAGGACACGTCCGTTCCCAGAGCATTGTaGGCTCCGTATTCTCTGAAGCCTGGAAACGAGGCACTCAGTTGG +
Preference number: 1 (lower is better)
Translates to: FLTPSQQDTSVPRAL*APYSLKPGNEALSW
Trigger: CCAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGAACGGACGTGTCCTGCTGGCTGGGTGTCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp CCTCCCGCATGTCCAGAGCAGAACCAACAGCCACCATGGATGATATaGCATTGCCTCCACCACCCCCTGAACTGCTGTCTGATCAACAGA +
Preference number: 1 (lower is better)
Translates to: PPACPEQNQQPPWMI*HCLHHPLNCCLINR
Trigger: TCTGTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACATGCGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp ATAGCACCCGCCTCACTCAAGCTGAGATTTCTGAGCAGCCAACAATaGCCACAGTTGTGCCACAAGTGCCCACCTCTCCCAAATCCAGCC +
Preference number: 1 (lower is better)
Translates to: IAPASLKLRFLSSQQ*PQLCHKCPPLPNPA
Trigger: GGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAGAAATCTCAGCTTGAGTGAGGCGGGTGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp CTGGAGTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTaGGTGGGCGTGGAAAGGACTCCGTGGTGGAATTTCCTTCTCCTC +
Preference number: 1 (lower is better)
Translates to: LEFSNKGVCQQKPLF*VGVERTPWWNFLLL
Trigger: GAGGAGAAGGAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp AGCAGGACACGTCCGTTCCCAGAGCATTGTGAGCTCCGTATTCTCTaGAGCCTGGAAACGAGGCACTCAGTTGGAAGAGTCCAGCAAGGT +
Preference number: 1 (lower is better)
Translates to: SRTRPFPEHCELRIL*SLETRHSVGRVQQG
Trigger: ACCTTGCTGGACTCTTCCAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGAACGGACGTGTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp GCATGTCCAGAGCAGAACCAACAGCCACCATGGATGATATGGCATTaGCTCCACCACCCCCTGAACTGCTGTCTGATCAACAGAAGGCTG +
Preference number: 1 (lower is better)
Translates to: ACPEQNQQPPWMIWH*LHHPLNCCLINRRL
Trigger: CAGCCTTCTGTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp CTGAGATTTCTGAGCAGCCAACAATGGCCACAGTTGTGCCACAAGTaGCCACCTCTCCCAAATCCAGCCTTAGTGTCCAGCCTGGATTCC +
Preference number: 1 (lower is better)
Translates to: LRFLSSQQWPQLCHK*PPLPNPALVSSLDS
Trigger: GGAATCCAGGCTGGACACTAAGGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAGAAATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp AGCCCCCTATTGTTGGGGGAGTATGGCGAGAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGATGACCTGGAAAGACACTGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: SPLLLGEYGERQAYS*CRTVQDDLERHWEE
Trigger: CTCCTCCCAGTGTCTTTCCAGGTCATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAACAATAGGGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CCA 90 bp AGTAATGGAAGGAGGGCGTCTATAGGGCAACGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGCAGGCCTATTCATGCTGTAGAACTG +
Preference number: 1 (lower is better)
Translates to: SNGRRASIGQRAPYC*GSMARGRPIHAVEL
Trigger: CAGTTCTACAGCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTTCCATTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR CCA 90 bp CCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTaGAAAGGACTCCGTGGTGGAATTTCCTTCTCCTCCATCCGATTC +
Preference number: 1 (lower is better)
Translates to: PTRVCVSKSPCSEWA*KGLRGGISFSSIRF
Trigger: GAATCGGATGGAGGAGAAGGAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TCACTCAAGCTGAGATTTCTGAGCAGCCAACAATGGCCACAGTTGTaGCACAAGTGCCCACCTCTCCCAAATCCAGCCTTAGTGTCCAGC +
Preference number: 1 (lower is better)
Translates to: SLKLRFLSSQQWPQL*HKCPPLPNPALVSS
Trigger: GCTGGACACTAAGGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAGAAATCTCAGCTTGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp AGTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTaGGCGTGGAAAGGACTCCGTGGTGGAATTTCCTTCTCCTCCATC +
Preference number: 1 (lower is better)
Translates to: SSPTRVCVSKSPCSE*AWKGLRGGISFSSI
Trigger: GATGGAGGAGAAGGAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp CACGTCCGTTCCCAGAGCATTGTGAGCTCCGTATTCTCTGAAGCCTaGAAACGAGGCACTCAGTTGGAAGAGTCCAGCAAGGTAACAGCT +
Preference number: 1 (lower is better)
Translates to: HVRSQSIVSSVFSEA*KRGTQLEESSKVTA
Trigger: AGCTGTTACCTTGCTGGACTCTTCCAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGAACGGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp CAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTaGTGTCTGATCAACAGAAGGCTGGTTACGGAGGCAGTCATATAT +
Preference number: 1 (lower is better)
Translates to: QPPWMIWHCLHHPLN*CLINRRLVTEAVIY
Trigger: ATATATGACTGCCTCCGTAACCAGCCTTCTGTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp TGTGCCTTCTTTCACTGCCCTCTGCTCTGCAGCTCTCACCCAGCTTaGCTGCTTCAAGTCTGTGCAGTTGACTTGGCTGTACTGAAAAGT +
Preference number: 1 (lower is better)
Translates to: CAFFHCPLLCSSHPA*LLQVCAVDLAVLKS
Trigger: ACTTTTCAGTACAGCCAAGTCAACTGCACAGACTTGAAGCAGCCAAGCTGGGTGAGAGCTGCAGAGCAGAGGGCAGTGAAAGAAGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp CCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTT +
Preference number: 1 (lower is better)
Translates to: PRSYSSKQHRSRGSG*LLRAFPQFKSLQNL
Trigger: AAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR TCA 90 bp ACTGCACCTGTACTTATGCCTTCAGAAGCAGCAGTGTACACAGGCTaGCAGGAAAACAGAACGCATGGCATGTGCCCCTTAATTGGCATA +
Preference number: 1 (lower is better)
Translates to: TAPVLMPSEAAVYTG*QENRTHGMCPLIGI
Trigger: TATGCCAATTAAGGGGCACATGCCATGCGTTCTGTTTTCCTGTCAGCCTGTGTACACTGCTGCTTCTGAAGGCATAAGTACAGGTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp TGGCAGTCGTTAATCCTCAACCACAACAATGGTCTAAAATGTCAGTaGAGAAGGCCCCTCCACCCACACGACCCAAACGGAATGATAGCA +
Preference number: 1 (lower is better)
Translates to: WQSLILNHNNGLKCQ*RRPLHPHDPNGMIA
Trigger: TGCTATCATTCCGTTTGGGTCGTGTGGGTGGAGGGGCCTTCTTCACTGACATTTTAGACCATTGTTGTGGTTGAGGATTAACGACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp CTCACACCAACACGAGTGTGTGTGTCAAGCTTATTCATTCCTGTGTaGCTGTGCACGCCTGCTCAACATTCTCATACTCTCCTGTGTCAG +
Preference number: 1 (lower is better)
Translates to: LTPTRVCVSSLFIPV*LCTPAQHSHTLLCQ
Trigger: CTGACACAGGAGAGTATGAGAATGTTGAGCAGGCGTGCACAGTCACACAGGAATGAATAAGCTTGACACACACACTCGTGTTGGTGTGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TCCCCTTTCGTTCACCATCTGTCAATCATACGTGGTTGTGGAAACTaGACCTGTACTTATGCCTTCAGAAGCAGCAGTGTACACAGGCTG +
Preference number: 1 (lower is better)
Translates to: SPFVHHLSIIRGCGN*TCTYAFRSSSVHRL
Trigger: CAGCCTGTGTACACTGCTGCTTCTGAAGGCATAAGTACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGGTGAACGAAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp CTCCACTCATCTGGAGGTGGTTTAATGGCACACAAGGAACATTACTaGCAACAGACTGCTCCCTCAAGTTCCCCTGGATGGTTTTTACTC +
Preference number: 1 (lower is better)
Translates to: LHSSGGGLMAHKEHY*QQTAPSSSPGWFLL
Trigger: GAGTAAAAACCATCCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAATGTTCCTTGTGTGCCATTAAACCACCTCCAGATGAGTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 90 bp CACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTaGACTGTCTTGGGTCCCCTTTCCATGTATGTTTTCTTGTCACTG +
Preference number: 1 (lower is better)
Translates to: HPPKAYPAKGCELSW*TVLGPLSMYVFLSL
Trigger: CAGTGACAAGAAAACATACATGGAAAGGGGACCCAAGACAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp TCATTCCACCAGGAAGCCCTCCTAAACCCAGTTATAGCATCTGCTTaGTGTGGATGCAGTCATGGACTGAAAGGTAAACTGGAGCCATCA +
Preference number: 1 (lower is better)
Translates to: SFHQEALLNPVIASA*CGCSHGLKGKLEPS
Trigger: TGATGGCTCCAGTTTACCTTTCAGTCCATGACTGCATCCACATCAAGCAGATGCTATAACTGGGTTTAGGAGGGCTTCCTGGTGGAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp GTAGGGCAGGCTGTGTCAAAGTCATACAGCCAAGGTCAGAAGTCATaGATCCTGTCACCATTCAAACAGCTTTTGCAGCCGGACATTTTT +
Preference number: 1 (lower is better)
Translates to: VGQAVSKSYSQGQKS*ILSPFKQLLQPDIF
Trigger: AAAAATGTCCGGCTGCAAAAGCTGTTTGAATGGTGACAGGATGCATGACTTCTGACCTTGGCTGTATGACTTTGACACAGCCTGCCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp ATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGC +
Preference number: 1 (lower is better)
Translates to: INCHNLFQVRTWSPR*VLFSIRITILNHSS
Trigger: GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR CCA 90 bp AAAGTGGAAGCCTTCCCCTTTCGTTCACCATCTGTCAATCATACGTaGTTGTGGAAACTGCACCTGTACTTATGCCTTCAGAAGCAGCAG +
Preference number: 1 (lower is better)
Translates to: KVEAFPFRSPSVNHT*LWKLHLYLCLQKQQ
Trigger: CTGCTGCTTCTGAAGGCATAAGTACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGGTGAACGAAAGGGGAAGGCTTCCACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp GCTATAAAAAGGTCCTCCATTCATCTGATTCTGAAGGCTTGTTTGTaGAGTAATGGAAGGAGGGCGTCTATAGGGCAACGAGCCCCCTAT +
Preference number: 1 (lower is better)
Translates to: AIKRSSIHLILKACL*SNGRRASIGQRAPY
Trigger: ATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTTCCATTACTTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGACCTTTTTATAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR GCA 90 bp CCATCTGTCAATCATACGTGGTTGTGGAAACTGCACCTGTACTTATaGCTTCAGAAGCAGCAGTGTACACAGGCTGACAGGAAAACAGAA +
Preference number: 1 (lower is better)
Translates to: PSVNHTWLWKLHLYL*LQKQQCTQADRKTE
Trigger: TTCTGTTTTCCTGTCAGCCTGTGTACACTGCTGCTTCTGAAGGCATAAGTACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp ACACAAGGAACATTACTGGCAACAGACTGCTCCCTCAAGTTCCCCTaGATGGTTTTTACTCAACTCATAATACCACCAACTCTCCCTCTG +
Preference number: 1 (lower is better)
Translates to: TQGTLLATDCSLKFP*MVFTQLIIPPTLPL
Trigger: CAGAGGGAGAGTTGGTGGTATTATGAGTTGAGTAAAAACCATCCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAATGTTCCTTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR CCA 90 bp ACACTTTGTCCTGAAGGAAGTAGAGCTTACCTAAGTCCTCAAGTGTaGACTGTGCTTAGTGACTTGCTTCCAGTGATTATGGAACGGGGA +
Preference number: 1 (lower is better)
Translates to: TLCPEGSRAYLSPQV*TVLSDLLPVIMERG
Trigger: TCCCCGTTCCATAATCACTGGAAGCAAGTCACTAAGCACAGTCCACACTTGAGGACTTAGGTAAGCTCTACTTCCTTCAGGACAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TGGAGGTGGTTTAATGGCACACAAGGAACATTACTGGCAACAGACTaGTCCCTCAAGTTCCCCTGGATGGTTTTTACTCAACTCATAATA +
Preference number: 1 (lower is better)
Translates to: WRWFNGTQGTLLATD*SLKFPWMVFTQLII
Trigger: TATTATGAGTTGAGTAAAAACCATCCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAATGTTCCTTGTGTGCCATTAAACCACCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR GCA 90 bp GGGACTTTGAGTGTTTGTGGATCGGCACCATTAAGAATCTGGTTTTaGATTTCATGTCAGGGTACCCAAAACATAGGCCATACACAGAAG +
Preference number: 1 (lower is better)
Translates to: GTLSVCGSAPLRIWF*ISCQGTQNIGHTQK
Trigger: CTTCTGTGTATGGCCTATGTTTTGGGTACCCTGACATGAAATGCAAAACCAGATTCTTAATGGTGCCGATCCACAAACACTCAAAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp CTGGCTGTAGTCACCATTTCAATATGCAAGAGGTCACTCCATCATTaGGGAACCAGTGGCACCCTGGGCTCAACTATTTTATTTTTACTA +
Preference number: 1 (lower is better)
Translates to: LAVVTISICKRSLHH*GTSGTLGSTILFLL
Trigger: TAGTAAAAATAAAATAGTTGAGCCCAGGGTGCCACTGGTTCCTCAATGATGGAGTGACCTCTTGCATATTGAAATGGTGACTACAGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TCAAACAAAGTAAACATGGCGTTTTATAGTCCTCTAAAATCTAGGTaGTCCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTA +
Preference number: 1 (lower is better)
Translates to: SNKVNMAFYSPLKSR*SHPPKAYPAKGCEL
Trigger: TAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGGAGCACCTAGATTTTAGAGGACTATAAAACGCCATGTTTACTTTGTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp TCAGGAAAATCTCTCAGCTTCATAGAACGGGTAACTAGTGCAGGATaGGGAAATGTTCACAGACATCATCTGTATGTGGTTGTGCATAGA +
Preference number: 1 (lower is better)
Translates to: SGKSLSFIERVTSAG*GNVHRHHLYVVVHR
Trigger: TCTATGCACAACCACATACAGATGATGTCTGTGAACATTTCCCCATCCTGCACTAGTTACCCGTTCTATGAAGCTGAGAGATTTTCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 90 bp GAGACTTTCACATTTCATCATCCTTATAATCCACAAACAGAAACATaGAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTC +
Preference number: 1 (lower is better)
Translates to: ETFTFHHPYNPQTET*RDASEFSIHSFGAL
Trigger: GAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGGATTATAAGGATGATGAAATGTGAAAGTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR TCA 90 bp ATGATATCTGTAATCACTGCTACAATCAGCTCACCTGATCATCTGTaGATTCAGGTGTTCAGAGCCTCCTGGTATGATGTTATTCAGGTA +
Preference number: 1 (lower is better)
Translates to: MISVITATISSPDHL*IQVFRASWYDVIQV
Trigger: TACCTGAATAACATCATACCAGGAGGCTCTGAACACCTGAATTCACAGATGATCAGGTGAGCTGATTGTAGCAGTGATTACAGATATCAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TTTAATCACTTTTATAAGGCTCTCTCCAATAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGTAATATAACATTTTTACTGCACACA +
Preference number: 1 (lower is better)
Translates to: FNHFYKALSNKAAVL*SCQCWSNITFLLHT
Trigger: TGTGTGCAGTAAAAATGTTATATTACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTTATTGGAGAGAGCCTTATAAAAGTGATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR GCA 90 bp CATCCCAGCACTTATAAGGGGAGCACATCTTGTAATGAAAGTCTGTaGCTATTGTTAATGATTACCAATGCAAACTGCAGAAATCAGTTG +
Preference number: 1 (lower is better)
Translates to: HPSTYKGSTSCNESL*LLLMITNANCRNQL
Trigger: CAACTGATTTCTGCAGTTTGCATTGGTAATCATTAACAATAGGCACAGACTTTCATTACAAGATGTGCTCCCCTTATAAGTGCTGGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp CGAAATAAACTACCAGATGTGATCATTTCAGCTACCCAGATGGGTTaGTTGTTGGCAAATGCTAGCTGCCATTTCTTGATACATTTTCTT +
Preference number: 1 (lower is better)
Translates to: RNKLPDVIISATQMG*LLANASCHFLIHFL
Trigger: AAGAAAATGTATCAAGAAATGGCAGCTAGCATTTGCCAACAACCAACCCATCTGGGTAGCTGAAATGATCACATCTGGTAGTTTATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 90 bp TATTCAGGTAGTGTCCAGCTATATGTGTATGTGTGTGTGTACACGTaGATGTACACACAGCTGTACAGTGTGTGTATATATGTATACATA +
Preference number: 1 (lower is better)
Translates to: YSGSVQLYVYVCVYT*MYTQLYSVCIYVYI
Trigger: TATGTATACATATATACACACACTGTACAGCTGTGTGTACATGCACGTGTACACACACACATACACATATAGCTGGACACTACCTGAATA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 90 bp AGTGTAATTTTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATT +
Preference number: 1 (lower is better)
Translates to: SVIFIICILHSTLLE*NPQGLQIIWEDLTI
Trigger: AATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAAAATTACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR TCA 90 bp TTCCACAAATTAAGATTGCACTTAGTACACGCCTTTACACAACTCTaGTGGTATTTACCAAAACATGGCATGTCTTTTCACGTATATTCC +
Preference number: 1 (lower is better)
Translates to: FHKLRLHLVHAFTQL*WYLPKHGMSFHVYS
Trigger: GGAATATACGTGAAAAGACATGCCATGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGCGTGTACTAAGTGCAATCTTAATTTGTGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR GCA 90 bp TCAGCATTTCTTATACTGACTACAGTAGTGATGATTAAAGTTATCTaGCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACAG +
Preference number: 1 (lower is better)
Translates to: SAFLILTTVVMIKVI*PTDSTEFEAVFIVQ
Trigger: CTGTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCATCACTACTGTAGTCAGTATAAGAAATGCTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCGGCCCAGCTAAAGCCTaGACCGTGTGCCCCATCCCT +
Preference number: 2 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTGPAKA*TVCPIP
Trigger: AGGGATGGGGCACACGGTGCAGGCTTTAGCTGGGCC...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACTCCAGCCTGGATTCCTaGCTGACCTCAACAGGACAC +
Preference number: 2 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYSSLDS*LTSTGH
Trigger: GTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGA...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp TTGATTCACAGAAGCTGTCCTCACAGGGCTCTGCTGCGAGGGAGCCATATTACGCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 2 (lower is better)
Translates to: LIHRSCPHRALLRGSHITHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...CGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CAA 90 bp CGCATGTCCAGAGCAGAACCAACAGCCACCATGGATGATATGGCATaGCCTCCACCACCCCCTGAACTGCTGTCTGATCAACAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: RMSRAEPTATMDDMA*PPPPPELLSDQQKA
Trigger: AGCCTTCTGTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp GCCTCACTCAAGCTGAGATTTCTGAGCAGCCAACAATGGCCACAGTaGTGCCACAAGTGCCCACCTCTCCCAAATCCAGCCTTAGTGTCC +
Preference number: 2 (lower is better)
Translates to: ASLKLRFLSSQQWPQ*CHKCPPLPNPALVS
Trigger: GGACACTAAGGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAGAAATCTCAGCTTGAGTGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 2 (lower is better)
Translates to: PSDNLGRPDYSCEASTALKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 2 (lower is better)
Translates to: PSDNLGRPDYSCEASTALAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 2 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR GCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 2 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR TCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAGGCCCAACATCACAGTaGCCACCCACAAAGAGACAA +
Preference number: 2 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPGPTSQ*PPTKRQ
Trigger: TTGTCTCTTTGTGGGTGGTCACTGTGATGTTGGGCC...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR TCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACACCAAGTCACTGGGACTaGGTAGAACCCACGTTAGCA +
Preference number: 2 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTPSHWD*VEPTLA
Trigger: TGCTAACGTGGGTTCTACTCAGTCCCAGTGACTTGG...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp CCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTGAACTGAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCA +
Preference number: 2 (lower is better)
Translates to: PTHQRHILQRAVNYLGELSRGSG*LLRAFP
Trigger: TGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCT...CAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGATCATATATCAGGCTATaGAACGTTGCGGAGAGGACC +
Preference number: 2 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGSYIRL*NVAERT
Trigger: GGTCCTCTCCGCAACGTTGCATAGCCTGATATATGA...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACTCTGTCAATCATACGTaGTTGTGGAAACTGCACCTG +
Preference number: 2 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYSVNHT*LWKLHL
Trigger: CAGGTGCAGTTTCCACAACCACGTATGATTGACAGA...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp GGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 2 (lower is better)
Translates to: GPLQHKDHYTQPQQLPPLVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...AAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR-3UTR CCA 90 bp TTGGGGGAGTATGGCGAGAGGCAGGCCTATTCATGCTGTAGAACTGTACAGGATTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: LGEYGERQAYSCCRTVQDSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTCAGTTTGGTATAACGTaGAGTCAGTGCTCTAACGAC +
Preference number: 2 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCQFGIT*SQCSND
Trigger: GTCGTTAGAGCACTGACTCCACGTTATACCAAACTG...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAGTCCCAGTATGTCTTTaGGTCACCAGTTACCTTCTT +
Preference number: 2 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGVPVCL*VTSYLL
Trigger: AAGAAGGTAACTGGTGACCCAAAGACATACTGGGAC...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC +
Preference number: 2 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPRYVII*YHWRTH
Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR-3UTR TCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTGTGGTGATTTTCTCATaGGAAGGTAGACAACACTTC +
Preference number: 2 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCVVIFS*EGRQHF
Trigger: GAAGTGTTGTCTACCTTCTCATGAGAAAATCACCAC...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR GCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR GCA 90 bp GTGAACAGCACCTCTCCATTGCTACATCTCCAGAATATTGTTCGGTTATGTTCACACTGCCCTCTGCTCTaGAGCTCTCACCCAGCTTGG +
Preference number: 2 (lower is better)
Translates to: VNSTSPLLHLQNIVRLCSHCPLL*SSHPAW
Trigger: CCAAGCTGGGTGAGAGCTGCAGAGCAGAGGGCAGTG...TGAACATAACCGAACAATATTCTGGAGATGTAGCAATGGAGAGGTGCTGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: VESPGPSDNLGRPDYSCEFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR CAA 90 bp GTGGAAGCCTTCCCCTTTCGTTCACCATCTGTCAATCATACGTGGTaGTGGAAACTGCACCTGTACTTATGCCTTCAGAAGCAGCAGTGT +
Preference number: 2 (lower is better)
Translates to: VEAFPFRSPSVNHTW*WKLHLYLCLQKQQC
Trigger: ACACTGCTGCTTCTGAAGGCATAAGTACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGGTGAACGAAAGGGGAAGGCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCATGAAGGGATGCAAGTaGGTTCAGCATTCACTCGTT +
Preference number: 2 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCMKGCK*VQHSLV
Trigger: AACGAGTGAATGCTGAACTCACTTGCATCCCTTCAT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR TCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACCACAAACAGAAACATaGAGGGATGCAAGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPPQTET*RDASEF
Trigger: GAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGG...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR TCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACAGCATCCGACACCATCTaGATTTTCTCACACACTACT +
Preference number: 2 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTASDTI*IFSHTT
Trigger: AGTAGTGTGTGAGAAAATTCAGATGGTGTCGGATGC...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp GTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTACCACACTTCACATCTaGGTACACTGGCCATTAGCA +
Preference number: 2 (lower is better)
Translates to: VGPLQHKDHYTQPQQLPPTTLHI*VHWPLA
Trigger: TGCTAATGGCCAGTGTACCCAGATGTGAAGTGTGGT...AGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR-3UTR CCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCGACTTTGAGTGTTTGTaGATCGGCACCATTAAGAAT +
Preference number: 2 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTDFECL*IGTIKN
Trigger: ATTCTTAATGGTGCCGATCCACAAACACTCAAAGTC...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp CCCCCTTTACCTGCATTGCTGGACTTCTGTGCATGTTGGATGCAATaGTCTCACACCAACACGAGTGTGTGTGTCAAGCTTATTCATTCC +
Preference number: 2 (lower is better)
Translates to: PPLPALLDFCACWMQ*SHTNTSVCVKLIHS
Trigger: GGAATGAATAAGCTTGACACACACACTCGTGTTGGTGTGAGACAATTGCATCCAACATGCACAGAAGTCCAGCAATGCAGGTAAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 2 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 2 (lower is better)
Translates to: ITSREHISKPCTPSDCQEQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 2 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTAATATACACATCCTGTaGCCCAATATGGTGCATTAT +
Preference number: 2 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCNIHIL*PNMVHY
Trigger: ATAATGCACCATATTGGGGCACAGGATGTGTATATT...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATACCACACTTCACATCTaGGTACACTGGCCATTAGCA +
Preference number: 2 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYTTLHI*VHWPLA
Trigger: TGCTAATGGCCAGTGTACCCAGATGTGAAGTGTGGT...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR TCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 2 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR TCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 2 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR TCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 2 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp AGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 2 (lower is better)
Translates to: SPRWVLFSIRITILNHSSCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR-3UTR GCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 2 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR GCA 90 bp GTGAACAGCACCTCTCCATTGCTACATCTCCAGAATATTGTTCGGTTATGTTCACTCACCCAGCTTGGCTaGTTCAAGTCTGTGCAGTTG +
Preference number: 2 (lower is better)
Translates to: VNSTSPLLHLQNIVRLCSLTQLG*FKSVQL
Trigger: CAACTGCACAGACTTGAAGCAGCCAAGCTGGGTGAG...TGAACATAACCGAACAATATTCTGGAGATGTAGCAATGGAGAGGTGCTGTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp GGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 2 (lower is better)
Translates to: GPLQHKDHYTQPQQLPPLGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...AAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 2 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGTTAAAATCAAACGGGTaGCAATCGTTCACCACCCTC +
Preference number: 2 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRLKSNG*QSFTTL
Trigger: GAGGGTGGTGAACGATTGCCACCCGTTTGATTTTAA...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACACCCATCTTCATGTTCTaGGTACTCACCTTAAATCTA +
Preference number: 2 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTPIFMF*VLTLNL
Trigger: TAGATTTAAGGTGAGTACCCAGAACATGAAGATGGG...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR-3UTR TCA 90 bp CAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAGCAAAAAGCTGTTTACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 2 (lower is better)
Translates to: QNTLCLINPLSFLSKKLFTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...AAACAGCTTTTTGCTGAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR TCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACATCAAGTTCCACTTTCTaGACTTGTTCAAAACCTCAT +
Preference number: 2 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTSSSTF*TCSKPH
Trigger: ATGAGGTTTTGAACAAGTTCAGAAAGTGGAACTTGA...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 2 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 2 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp CTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTCGTAATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LFSIRITILNHSSFLLFVMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...TACGAAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR-3UTR GCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCAACAATGCAGTCTCATaGAGCAGCACATTAAAATCA +
Preference number: 2 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCNNAVS*SSTLKS
Trigger: TGATTTTAATGTGCTGCTGCATGAGACTGCATTGTT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp CTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTCGTAGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 2 (lower is better)
Translates to: LFSIRITILNHSSFLLFVGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...TACGAAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp ACCCTTTCTACAGCTAAGCGAGTCAGTAATACAGCAGCAACTAATACTGGCCATTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TLSTAKRVSNTAATNTGHFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...ATGGCCAGTATTAGTTGCTGCTGTATTACTGACTCGCTTAGCTGTAGAAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp ACCCTTTCTACAGCTAAGCGAGTCAGTAATACAGCAGCAACTAATACTGGCCATCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: TLSTAKRVSNTAATNTGHQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...ATGGCCAGTATTAGTTGCTGCTGTATTACTGACTCGCTTAGCTGTAGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp ACCCTTTCTACAGCTAAGCGAGTCAGTAATACAGCAGCAACTAATACTGGCCATCACATCTGGGTACACTaGCCATTAGCAACAATGCAG +
Preference number: 2 (lower is better)
Translates to: TLSTAKRVSNTAATNTGHHIWVH*PLATMQ
Trigger: CTGCATTGTTGCTAATGGCCAGTGTACCCAGATGTG...ATGGCCAGTATTAGTTGCTGCTGTATTACTGACTCGCTTAGCTGTAGAAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR CAA 90 bp GGGGACTTTGAGTGTTTGTGGATCGGCACCATTAAGAATCTGGTTTaGCATTTCATGTCAGGGTACCCAAAACATAGGCCATACACAGAA +
Preference number: 2 (lower is better)
Translates to: GDFECLWIGTIKNLV*HFMSGYPKHRPYTE
Trigger: TTCTGTGTATGGCCTATGTTTTGGGTACCCTGACATGAAATGCAAAACCAGATTCTTAATGGTGCCGATCCACAAACACTCAAAGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp CCTGGCTGTAGTCACCATTTCAATATGCAAGAGGTCACTCCATCATaGAGGAACCAGTGGCACCCTGGGCTCAACTATTTTATTTTTACT +
Preference number: 2 (lower is better)
Translates to: PGCSHHFNMQEVTPS*RNQWHPGLNYFIFT
Trigger: AGTAAAAATAAAATAGTTGAGCCCAGGGTGCCACTGGTTCCTCAATGATGGAGTGACCTCTTGCATATTGAAATGGTGACTACAGCCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp GTAGTGATGATTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTAACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 2 (lower is better)
Translates to: VVMIKVICPTDSTEFEAVTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...TACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCATCACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR TCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTTCAAGTTCCACTTTCTaGACTTGTTCAAAACCTCAT +
Preference number: 2 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTSSSTF*TCSKPH
Trigger: ATGAGGTTTTGAACAAGTTCAGAAAGTGGAACTTGA...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 2 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGTGGTATTTAAATGTTaGTTCCCTCCTCTTCATACA +
Preference number: 2 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSVVFKC*FPPLHT
Trigger: TGTATGAAGAGGAGGGAACCAACATTTAAATACCAC...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp AAATTGGGGGATCATAATAATTCCAACCAAGTGACAACTCTGACATCAAGGTTAGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: KLGDHNNSNQVTTLTSRLDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...TAACCTTGATGTCAGAGTTGTCACTTGGTTGGAATTATTATGATCCCCCAATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTAAGTATAGTCTAGTTTaGGTCCATAATGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTKYSLV*VHNGAE
Trigger: TTCAGCTCCATTATGGACCCAAACTAGACTATACTT...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp GTAGTGATGATTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTAATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 2 (lower is better)
Translates to: VVMIKVICPTDSTEFEAVIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...TACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCATCACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR-3UTR CCA 90 bp AAACTGCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 2 (lower is better)
Translates to: KLQLFPNLVTKVDSRSTPSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...AGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413635.5
ENST00000444584.1
3UTR-3UTR CCA 90 bp TTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATTTGCTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 2 (lower is better)
Translates to: LFPNLVTKVDSRSTPLICSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...GCAAATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413635.5
ENST00000444584.1
3UTR CAA 90 bp AAACAGAAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTaGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCAC +
Preference number: 2 (lower is better)
Translates to: KQKHEGMQVSSAFTR*VHSSAERMQNLQCH
Trigger: GTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR CAA 90 bp CTGTTTCCTTCTTGCCCGCACAATCAGATTTTAGCCTTCCTGACATaGTCCATCTTTATGATCACCACCAACTTCTGCATCCTTTTCATG +
Preference number: 2 (lower is better)
Translates to: LFPSCPHNQILAFLT*SIFMITTNFCILFM
Trigger: CATGAAAAGGATGCAGAAGTTGGTGGTGATCATAAAGATGGACAATGTCAGGAAGGCTAAAATCTGATTGTGCGGGCAAGAAGGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp AGCCAAGGTCAGAAGTCATGCATCCTGTCACCATTCAAACAGCTTTaGCAGCCGGACATTTTTCCTAGATTGTTAGATGGTCTAGCTATT +
Preference number: 2 (lower is better)
Translates to: SQGQKSCILSPFKQL*QPDIFPRLLDGLAI
Trigger: AATAGCTAGACCATCTAACAATCTAGGAAAAATGTCCGGCTGCAAAAGCTGTTTGAATGGTGACAGGATGCATGACTTCTGACCTTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp CTATTTATTGGATTTCAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 2 (lower is better)
Translates to: LFIGFQNTLCLINPLSFLTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...GAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTGAAATCCAATAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 2 (lower is better)
Translates to: ITSREHISKPCTPSDCQECSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGTTGGCTACACAGTTATaGTGTTATACCTTTGACATA +
Preference number: 2 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGLATQL*CYTFDI
Trigger: TATGTCAAAGGTATAACAGCATAACTGTGTAGCCAA...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR GCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAACATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR GCA 90 bp CTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAGTATTAAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCA +
Preference number: 2 (lower is better)
Translates to: LTNSSYLRVQSYKIRRVLSRGSG*LLRAFP
Trigger: TGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCT...TAATACTCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: FIICILHSTLLEWNPQGLFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CCA 90 bp TTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 2 (lower is better)
Translates to: LKLSALQTPLNLKLYLLYDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...GTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR CAA 90 bp ATTAGCCTGAAAAATATTTCAGGTAATGGTGTGGATTGGCCTGCTTaGACTCTCAGCCACCAACAGAAATCTTTGTCACCTTTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: ISLKNISGNGVDWPA*TLSHQQKSLSPLFL
Trigger: GAGGAACAAAGGTGACAAAGATTTCTGTTGGTGGCTGAGAGTCAAAGCAGGCCAATCCACACCATTACCTGAAATATTTTTCAGGCTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTTGGCTACACAGTTATaGTGTTATACCTTTGACATA +
Preference number: 2 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDLATQL*CYTFDI
Trigger: TATGTCAAAGGTATAACAGCATAACTGTGTAGCCAA...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CCA 90 bp CTGGATTCTGGCTATAAAAAGGTCCTCCATTCATCTGATTCTGAAGGCTTGTTTCCCATCTTCATGTTCTaGGTACTCACCTTTACTCCA +
Preference number: 2 (lower is better)
Translates to: LDSGYKKVLHSSDSEGLFPIFMF*VLTFTP
Trigger: TGGAGTAAAGGTGAGTACCCAGAACATGAAGATGGG...AAACAAGCCTTCAGAATCAGATGAATGGAGGACCTTTTTATAGCCAGAATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR-3UTR GCA 90 bp AAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACAGCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 2 (lower is better)
Translates to: KVICPTDSTEFEAVFIVQQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...CTGTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp GATCCATTTGTTCAGACTCAGCTTGCTTTGTTTTTAATACTGGGGAATAAACCATTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: DPFVQTQLALFLILGNKPFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...TGGTTTATTCCCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACAAATGGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CCA 90 bp TTAAGAGTCCAATCATACAAAATCAGGAGAGTATTACCCTTTCTACAGCTAAGCCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 2 (lower is better)
Translates to: LRVQSYKIRRVLPFLQLSQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...GCTTAGCTGTAGAAAGGGTAATACTCTCCTGATTTTGTATGATTGGACTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp AAGATTGCACTTAGTACACGCCTTTACACAACTCTGATGGTATTTACCAAAACACACATCTGGGTACACTaGCCATTAGCAACAATGCAG +
Preference number: 2 (lower is better)
Translates to: KIALSTRLYTTLMVFTKTHIWVH*PLATMQ
Trigger: CTGCATTGTTGCTAATGGCCAGTGTACCCAGATGTG...TGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGCGTGTACTAAGTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp AAGATTGCACTTAGTACACGCCTTTACACAACTCTGATGGTATTTACCAAAACAGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATTT +
Preference number: 2 (lower is better)
Translates to: KIALSTRLYTTLMVFTKTGVSPC*PGWSQF
Trigger: AAATTGAGACCATCCTGGCCAACATGGTGAAACCCC...TGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGCGTGTACTAAGTGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR TCA 90 bp TTAATTCTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAACCTTGTACTCCCAGTaGCTGTCAGGAGACTTGAAA +
Preference number: 2 (lower is better)
Translates to: LILTNSSYLRVQSYKIRRTLYSQ*LSGDLK
Trigger: TTTCAAGTCTCCTGACAGTCACTGGGAGTACAAGGT...TCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAATGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 2 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR GCA 90 bp GTATTTATAAGTGTCTGTCCATGTGTAGCCTATTCGTGCATGTTGTGTATTATACAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 2 (lower is better)
Translates to: VFISVCPCVAYSCMLCIIQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...TATAATACACAACATGCACGAATAGGCTACACATGGACAGACACTTATAAATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR GCA 90 bp AAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACAGCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 2 (lower is better)
Translates to: KVICPTDSTEFEAVFIVQHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...CTGTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAAATGATAGTCATAGTTaGTCTGAACTCCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKNDSHS*SELQDP
Trigger: AGGATCTTGGAGTTCAGACCAACTATGACTATCATT...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp CTGGATTCTGGCTATAAAAAGGTCCTCCATTCATCTGATTCTGAAGGCTTGTTTTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 2 (lower is better)
Translates to: LDSGYKKVLHSSDSEGLFSFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...AAACAAGCCTTCAGAATCAGATGAATGGAGGACCTTTTTATAGCCAGAATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CCA 90 bp GCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATTCTGCAGGACATTGTTaGCCAAGGTGTTTATCAGAT +
Preference number: 2 (lower is better)
Translates to: AIVSKFGHKSRLKINASNSAGHC*PRCLSD
Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTGCAGA...ATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413635.5
ENST00000444584.1
3UTR CAA 90 bp AAACAACAGCCTTTATGTTTTCAGTGCAGGATTTCTTGGAATTTCTaGCTTGTATCAATCCTGATGATAGCCATCCTGAACAGATGCTTC +
Preference number: 2 (lower is better)
Translates to: KQQPLCFQCRISWNF*LVSILMIAILNRCF
Trigger: GAAGCATCTGTTCAGGATGGCTATCATCAGGATTGATACAAGCAAGAAATTCCAAGAAATCCTGCACTGAAAACATAAAGGCTGTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR TCA 90 bp TTAATTCTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 2 (lower is better)
Translates to: LILTNSSYLRVQSYKIRRGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...TCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAGAATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTAATGATAGTCATAGTTaGTCTGAACTCCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: FIICILHSTLLEWNPQGLNDSHS*SELQDP
Trigger: AGGATCTTGGAGTTCAGACCAACTATGACTATCATT...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR CAA 90 bp AATAAACTACCAGATGTGATCATTTCAGCTACCCAGATGGGTTGGTaGTTGGCAAATGCTAGCTGCCATTTCTTGATACATTTTCTTTAT +
Preference number: 2 (lower is better)
Translates to: NKLPDVIISATQMGW*LANASCHFLIHFLY
Trigger: ATAAAGAAAATGTATCAAGAAATGGCAGCTAGCATTTGCCAACAACCAACCCATCTGGGTAGCTGAAATGATCACATCTGGTAGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp ATATCAACTGTCTCATTCAATCTCAAACTGCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATTTGCCTC +
Preference number: 2 (lower is better)
Translates to: ISTVSFNLKLQLFPN*VTKVDSRSTPLICL
Trigger: GAGGCAAATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAGTTTGAGATTGAATGAGACAGTTGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444584.1
3UTR-3UTR CCA 90 bp AAATTGGGGGATCATAATAATTCCAACCAAGTGACAACTCTGACATCAAGGTTAAAGAAAAGCACGAAGTaGAATGTATACTGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: KLGDHNNSNQVTTLTSRLKKSTK*NVYWRQ
Trigger: TTGCCTCCAGTATACATTCCACTTCGTGCTTTTCTT...TAACCTTGATGTCAGAGTTGTCACTTGGTTGGAATTATTATGATCCCCCAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 90 bp ATATCAACTGTCTCATTCAATCTCAAACTGCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATTTGCCTA +
Preference number: 2 (lower is better)
Translates to: ISTVSFNLKLQLFPN*VTKVDSRSTPLICL
Trigger: TAGGCAAATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAGTTTGAGATTGAATGAGACAGTTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR-3UTR CCA 90 bp CTATTTATTGGATTTCAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAAGTATAGTCTAGTTTaGGTCCATAATGGAGCTGAA +
Preference number: 2 (lower is better)
Translates to: LFIGFQNTLCLINPLSFLKYSLV*VHNGAE
Trigger: TTCAGCTCCATTATGGACCCAAACTAGACTATACTT...GAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTGAAATCCAATAAATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp CTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAGTATTATTGGCTACACAGTTATaGTGTTATACCTTTGACATA +
Preference number: 2 (lower is better)
Translates to: LTNSSYLRVQSYKIRRVLLATQL*CYTFDI
Trigger: TATGTCAAAGGTATAACAGCATAACTGTGTAGCCAA...TAATACTCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR GCA 90 bp TTAATTCTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAATGATTAAAGTTATCTaGCCTACAGACTCCACTGAA +
Preference number: 2 (lower is better)
Translates to: LILTNSSYLRVQSYKIRRMIKVI*PTDSTE
Trigger: TTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCAT...TCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAGAATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CCA 90 bp TTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACAATGATAGTCATAGTTaGTCTGAACTCCAAGATCCT +
Preference number: 2 (lower is better)
Translates to: LKLSALQTPLNLKLYLLYNDSHS*SELQDP
Trigger: AGGATCTTGGAGTTCAGACCAACTATGACTATCATT...GTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR GCA 90 bp TTAATTCTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGATTGGCTACACAGTTATaGTGTTATACCTTTGACATA +
Preference number: 2 (lower is better)
Translates to: LILTNSSYLRVQSYKIRRLATQL*CYTFDI
Trigger: TATGTCAAAGGTATAACAGCATAACTGTGTAGCCAA...TCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAGAATTAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR GCA 72 bp AGGCTCTGCCATGGCCCAGCTAAAGCCTGCACCGTGTaGCCCATCCCTTCCACAGTTCAGTGCCCCGCCTCC +
Preference number: 3 (lower is better)
Translates to: RLCHGPAKACTV*PIPSTVQCPAS
Trigger: GGAGGCGGGGCACTGAACTGTGGAAGGGATGGGGCACACGGTGCAGGCTTTAGCTGGGCCATGGCAGAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp CATTTGGTACCACTGGAGGACGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCCCAAGTGTCCCTTTCC +
Preference number: 3 (lower is better)
Translates to: HLVPLEDALAPV*DRGSAAQVSLS
Trigger: GGAAAGGGACACTTGGGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CCA 72 bp AGGAAGGGGAGGAGTGCCAGCAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGATGGAGTAGGAACAGC +
Preference number: 3 (lower is better)
Translates to: RKGRSASRASRG*KDTGRRWSRNS
Trigger: GCTGTTCCTACTCCATCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR GCA 72 bp GAAGGCTGGTTACGGAGGCAGTCATATATCAGGCTATaGAACGTTGCGGAGAGGACCCCCTCCTGCTCCCCC +
Preference number: 3 (lower is better)
Translates to: EGWLRRQSYIRL*NVAERTPSCSP
Trigger: GGGGGAGCAGGAGGGGGTCCTCTCCGCAACGTTGCATAGCCTGATATATGACTGCCTCCGTAACCAGCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp TCCACTACTCCCACTGCTGCCAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGGCTTCTGAGTTGGAGG +
Preference number: 3 (lower is better)
Translates to: STTPTAAKCPFP*HRGTRGLLSWR
Trigger: CCTCCAACTCAGAAGCCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTTGGCAGCAGTGGGAGTAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR TCA 72 bp CCCAGCCAGCAGGACACGTCCGTTCCCAGAGCATTGTaGGCTCCGTATTCTCTGAAGCCTGGAAACGAGGCA +
Preference number: 3 (lower is better)
Translates to: PSQQDTSVPRAL*APYSLKPGNEA
Trigger: TGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGAACGGACGTGTCCTGCTGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GAACCCCCACACTACCACTTCCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGTGGCTCCCTCCACTAC +
Preference number: 3 (lower is better)
Translates to: EPPHYHFHCSLD*CSDYLGGSLHY
Trigger: GTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTGGAAGTGGTAGTGTGGGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR CCA 72 bp CCTCCCGCATGTCCAGAGCAGAACCAACAGCCACCATaGATGATATGGCATTGCCTCCACCACCCCCTGAAC +
Preference number: 3 (lower is better)
Translates to: PPACPEQNQQPP*MIWHCLHHPLN
Trigger: GTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACATGCGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp AGGTACGTAATCATTTGGTACCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGGGGAGTGCCGCCCAAG +
Preference number: 3 (lower is better)
Translates to: RYVIIWYHWRTH*LQCAIGGVPPK
Trigger: CTTGGGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR GCA 72 bp TCCAGCCTGGATTCCTGGCTGACCTCAACAGGACACTaGAACGAAAGTCCATCACTCGGCACGGCTCACTCT +
Preference number: 3 (lower is better)
Translates to: SSLDSWLTSTGH*NESPSLGTAHS
Trigger: AGAGTGAGCCGTGCCGAGTGATGGACTTTCGTTGCAGTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp CTGAGCAGCCAACAATGGCCACAGTTGTGCCACAAGTaGCCACCTCTCCCAAATCCAGCCTTAGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: LSSQQWPQLCHK*PPLPNPALVSS
Trigger: GCTGGACACTAAGGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp AAACTGGAGCCATCACATCTCCCCTTGGAAGTCCAGTaGTCAGAGGACCGCCACAGAGGGTTCCATGTAGGG +
Preference number: 3 (lower is better)
Translates to: KLEPSHLPLEVQ*SEDRHRGFHVG
Trigger: CCCTACATGGAACCCTCTGTGGCGGTCCTCTGAGCACTGGACTTCCAAGGGGAGATGTGATGGCTCCAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp AGAGCCAGCAGGGGCTGGAAAGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGGAACCCCCACACTACC +
Preference number: 3 (lower is better)
Translates to: RASRGWKDTGRR*SRNSNRNPHTT
Trigger: GGTAGTGTGGGGGTTCCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR CCA 72 bp ACGGGTTGGGCTAGGTACGTAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAGTGTGCGATAGGGGGA +
Preference number: 3 (lower is better)
Translates to: TGWARYVIIWYH*RTHWLQCAIGG
Trigger: TCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR CCA 72 bp TGTCCAGAGCAGAACCAACAGCCACCATGGATGATATaGCATTGCCTCCACCACCCCCTGAACTGCTGTCTG +
Preference number: 3 (lower is better)
Translates to: CPEQNQQPPWMI*HCLHHPLNCCL
Trigger: CAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp GTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTaGAAAGGACTCCGTGGTGGAATTTCCTTCTCCTCC +
Preference number: 3 (lower is better)
Translates to: VCVSKSPCSEWA*KGLRGGISFSS
Trigger: GGAGGAGAAGGAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp CACAGGGCTCTGCTGCGAGGGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATTTGGTACCACTGGAGG +
Preference number: 3 (lower is better)
Translates to: HRALLRGSHITG*ARYVIIWYHWR
Trigger: CCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR TCA 72 bp CCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTaGGTAGAACCCACGTTAGCAGCTCTGGACCTGAAC +
Preference number: 3 (lower is better)
Translates to: PGKALFWPSHWD*VEPTLAALDLN
Trigger: GTTCAGGTCCAGAGCTGCTAACGTGGGTTCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 72 bp TCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTaGGTGGGCGTGGAAAGGACTCCGTGGTGGAATTTC +
Preference number: 3 (lower is better)
Translates to: SNKGVCQQKPLF*VGVERTPWWNF
Trigger: GAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp CGTCCGTTCCCAGAGCATTGTGAGCTCCGTATTCTCTaGAGCCTGGAAACGAGGCACTCAGTTGGAAGAGTC +
Preference number: 3 (lower is better)
Translates to: RPFPEHCELRIL*SLETRHSVGRV
Trigger: GACTCTTCCAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGAACGGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp TGGATGATATGGCATTGCCTCCACCACCCCCTGAACTaGTGTCTGATCAACAGAAGGCTGGTTACGGAGGCA +
Preference number: 3 (lower is better)
Translates to: WMIWHCLHHPLN*CLINRRLVTEA
Trigger: TGCCTCCGTAACCAGCCTTCTGTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GAGCAGAACCAACAGCCACCATGGATGATATGGCATTaGCTCCACCACCCCCTGAACTGCTGTCTGATCAAC +
Preference number: 3 (lower is better)
Translates to: EQNQQPPWMIWH*LHHPLNCCLIN
Trigger: GTTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp CTCCCAAATCCAGCCTTAGTGTCCAGCCTGGATTCCTaGCTGACCTCAACAGGACACTGCAACGAAAGTCCA +
Preference number: 3 (lower is better)
Translates to: LPNPALVSSLDS*LTSTGHCNESP
Trigger: TGGACTTTCGTTGCAGTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGACACTAAGGCTGGATTTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp ACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTaGGCGTGGAAAGGACTCCGTGGTGGAATTTCCTTC +
Preference number: 3 (lower is better)
Translates to: TRVCVSKSPCSE*AWKGLRGGISF
Trigger: GAAGGAAATTCCACCACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp AGCCATATTACGGGTTGGGCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCACTGGCTCCAGTGTGCG +
Preference number: 3 (lower is better)
Translates to: SHITGWARYVII*YHWRTHWLQCA
Trigger: CGCACACTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGATTACGTACCTAGCCCAACCCGTAATATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
3UTR-3UTR CAA 90 bp GGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTTCTGAGTTGGAGGTGTaGTACGCGGCAGCCCACCCA +
Preference number: 3 (lower is better)
Translates to: GPLQHKDHYTQPQQLPPLSELEV*YAAAHP
Trigger: TGGGTGGGCTGCCGCGTACAACACCTCCAACTCAGA...AAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CAA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACACGAGCCCCCTATTGTaGGGGGAGTATGGCGAGAGG +
Preference number: 3 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDTSPLL*GEYGER
Trigger: CCTCTCGCCATACTCCCCCAACAATAGGGGGCTCGT...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR TCA 72 bp GGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTGTaGTTAGTTCAGGTTACTAGGTGTTCTGATGGAGTG +
Preference number: 3 (lower is better)
Translates to: GLPGPLLTAAWL*LVQVTRCSDGV
Trigger: CACTCCATCAGAACACCTAGTAACCTGAACTAATCACAACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp CTGAGATTTCTGAGCAGCCAACAATGGCCACAGTTGTaGCACAAGTGCCCACCTCTCCCAAATCCAGCCTTA +
Preference number: 3 (lower is better)
Translates to: LRFLSSQQWPQL*HKCPPLPNPAL
Trigger: TAAGGCTGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTGTGGCCATTGTTGGCTGCTCAGAAATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp TCCCAGAGCATTGTGAGCTCCGTATTCTCTGAAGCCTaGAAACGAGGCACTCAGTTGGAAGAGTCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: SQSIVSSVFSEA*KRGTQLEESSK
Trigger: CTTGCTGGACTCTTCCAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTCACAATGCTCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp TTGGGGGAGTATGGCGAGAGGCAGGCCTATTCATGCTGTAGAACTGTACAGGATTCAGCATTCACTCGTTaGGTGCACTCAAGTGCTGAG +
Preference number: 3 (lower is better)
Translates to: LGEYGERQAYSCCRTVQDSAFTR*VHSSAE
Trigger: CTCAGCACTTGAGTGCACCAAACGAGTGAATGCTGA...ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR CCA 72 bp TTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCTGTGAGGCAAGCACAG +
Preference number: 3 (lower is better)
Translates to: LLEWNPQGLQII*EDLTIPVRQAQ
Trigger: CTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR CCA 72 bp TCTGGAGGTGGTTTAATGGCACACAAGGAACATTACTaGCAACAGACTGCTCCCTCAAGTTCCCCTGGATGG +
Preference number: 3 (lower is better)
Translates to: SGGGLMAHKEHY*QQTAPSSSPGW
Trigger: CCATCCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAATGTTCCTTGTGTGCCATTAAACCACCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR-3UTR CAA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCGGCAGAAAGATCCATTaGTTCAGACTCAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAGRKIH*FRLSLL
Trigger: AAGCAAGCTGAGTCTGAACAAATGGATCTTTCTGCC...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CAA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAACCACCCTCAGAGTGTaGGGAGACTTTCACATTTCA +
Preference number: 3 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPTTLRV*GDFHIS
Trigger: TGAAATGTGAAAGTCTCCCAACACTCTGAGGGTGGT...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR TCA 72 bp GTACTTATGCCTTCAGAAGCAGCAGTGTACACAGGCTaGCAGGAAAACAGAACGCATGGCATGTGCCCCTTA +
Preference number: 3 (lower is better)
Translates to: VLMPSEAAVYTG*QENRTHGMCPL
Trigger: TAAGGGGCACATGCCATGCGTTCTGTTTTCCTGTCAGCCTGTGTACACTGCTGCTTCTGAAGGCATAAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp TACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTT +
Preference number: 3 (lower is better)
Translates to: YSSKQHRSRGSG*LLRAFPQFKSL
Trigger: AAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR CCA 72 bp CCCCCTTTACCTGCATTGCTGGACTTCTGTGCATGTTaGATGCAATTGTCTCACACCAACACGAGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PPLPALLDFCAC*MQLSHTNTSVC
Trigger: ACACACACTCGTGTTGGTGTGAGACAATTGCATCCAACATGCACAGAAGTCCAGCAATGCAGGTAAAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp CAAGACAGGGTCAAGTTAAGGTCAGGGGTTGTTCTCTaGAAACACATTAACCTCGGTGACGCCTGTATCCCA +
Preference number: 3 (lower is better)
Translates to: QDRVKLRSGVVL*KHINLGDACIP
Trigger: TGGGATACAGGCGTCACCGAGGTTAATGTGTTTCCAGAGAACAACCCCTGACCTTAACTTGACCCTGTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCGGCAGAAAGATCCATTaGTTCAGACTCAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCGRKIH*FRLSLL
Trigger: AAGCAAGCTGAGTCTGAACAAATGGATCTTTCTGCC...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CAA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCAGAAATCAGTTGACATaGTCCCACAAGGAAAAAGTG +
Preference number: 3 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTRNQLT*SHKEKV
Trigger: CACTTTTTCCTTGTGGGACAATGTCAACTGATTTCT...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp CCCACACTCCACGAAAACCGCATCGTAAACAGAGAGTaGACAGCACCTCTCCATTGCTACATCTCCAGAATA +
Preference number: 3 (lower is better)
Translates to: PTLHENRIVNRE*TAPLHCYISRI
Trigger: TATTCTGGAGATGTAGCAATGGAGAGGTGCTGTTCACTCTCTGTTTACGATGCGGTTTTCGTGGAGTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp TTAATCCTCAACCACAACAATGGTCTAAAATGTCAGTaGAGAAGGCCCCTCCACCCACACGACCCAAACGGA +
Preference number: 3 (lower is better)
Translates to: LILNHNNGLKCQ*RRPLHPHDPNG
Trigger: TCCGTTTGGGTCGTGTGGGTGGAGGGGCCTTCTTCACTGACATTTTAGACCATTGTTGTGGTTGAGGATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp AACAGAACGCATGGCATGTGCCCCTTAATTGGCATATaGCCCAGATCCACAAAGCCGTTCAACCAAATGTGT +
Preference number: 3 (lower is better)
Translates to: NRTHGMCPLIGI*PRSTKPFNQMC
Trigger: ACACATTTGGTTGAACGGCTTTGTGGATCTGGGGCATATGCCAATTAAGGGGCACATGCCATGCGTTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GCTGTGTCAAAGTCATACAGCCAAGGTCAGAAGTCATaGATCCTGTCACCATTCAAACAGCTTTTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: AVSKSYSQGQKS*ILSPFKQLLQP
Trigger: CGGCTGCAAAAGCTGTTTGAATGGTGACAGGATGCATGACTTCTGACCTTGGCTGTATGACTTTGACACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp GTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTCTTCAGCATAAGGATC +
Preference number: 3 (lower is better)
Translates to: VINCHNLFQVRT*SPRWVLFSIRI
Trigger: GATCCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR CCA 72 bp AGGCAACACTTGCTAAGGATTGGGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCTCTGCTTATCTGCTGACA +
Preference number: 3 (lower is better)
Translates to: RQHLLRIGWCRL*FLLGLSAYLLT
Trigger: TGTCAGCAGATAAGCAGAGAGCCCTAGAAGAAACCAAAGCCTACACCACCCAATCCTTAGCAAGTGTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425253.1
3UTR CCA 72 bp AGGCAACACTTGCTAAGGATTGGGTGGTGTAGGCTTTaGTTTCTTCTAGGGCTCTCTGCTTATCTGCTGACT +
Preference number: 3 (lower is better)
Translates to: RQHLLRIGWCRL*FLLGLSAYLLT
Trigger: AGTCAGCAGATAAGCAGAGAGCCCTAGAAGAAACCAAAGCCTACACCACCCAATCCTTAGCAAGTGTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447762.5
3UTR-3UTR CAA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACACCACCCTCAGAGTGTaGGGAGACTTTCACATTTCA +
Preference number: 3 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDTTLRV*GDFHIS
Trigger: TGAAATGTGAAAGTCTCCCAACACTCTGAGGGTGGT...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CAA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGGGCAGAAAGATCCATTaGTTCAGACTCAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRGRKIH*FRLSLL
Trigger: AAGCAAGCTGAGTCTGAACAAATGGATCTTTCTGCC...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CAA 90 bp AGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: SPRWVLFSIRITILNHSSQLFPN*VTKVDS
Trigger: TGAGTCGACTTTTGTGACCAAATTTGGAAACAATTG...GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
3UTR-3UTR CAA 90 bp CTATTTATTGGATTTCAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCTCTGAGTTGGAGGTGTaGTACGCGGCAGCCCACCCA +
Preference number: 3 (lower is better)
Translates to: LFIGFQNTLCLINPLSFLSELEV*YAAAHP
Trigger: TGGGTGGGCTGCCGCGTACAACACCTCCAACTCAGA...GAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTGAAATCCAATAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR TCA 72 bp CACCAATCAGGAGTTCCCGGCCAAAAAGACCAGAAGTaGGCAGATCCCATTCTTTTCAAAGACTTGTCAGTC +
Preference number: 3 (lower is better)
Translates to: HQSGVPGQKDQK*ADPILFKDLSV
Trigger: GACTGACAAGTCTTTGAAAAGAATGGGATCTGCTCACTTCTGGTCTTTTTGGCCGGGAACTCCTGATTGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 72 bp AGGTCCTCCATTCATCTGATTCTGAAGGCTTGTTTGTaGAGTAATGGAAGGAGGGCGTCTATAGGGCAACGA +
Preference number: 3 (lower is better)
Translates to: RSSIHLILKACL*SNGRRASIGQR
Trigger: TCGTTGCCCTATAGACGCCCTCCTTCCATTACTTCACAAACAAGCCTTCAGAATCAGATGAATGGAGGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
3UTR TCA 72 bp CAGGAAGCCCTCCTAAACCCAGTTATAGCATCTGCTTaGTGTGGATGCAGTCATGGACTGAAAGGTAAACTG +
Preference number: 3 (lower is better)
Translates to: QEALLNPVIASA*CGCSHGLKGKL
Trigger: CAGTTTACCTTTCAGTCCATGACTGCATCCACATCAAGCAGATGCTATAACTGGGTTTAGGAGGGCTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp ACACGAGTGTGTGTGTCAAGCTTATTCATTCCTGTGTaGCTGTGCACGCCTGCTCAACATTCTCATACTCTC +
Preference number: 3 (lower is better)
Translates to: TRVCVSSLFIPV*LCTPAQHSHTL
Trigger: GAGAGTATGAGAATGTTGAGCAGGCGTGCACAGTCACACAGGAATGAATAAGCTTGACACACACACTCGTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GTAAACATGGCGTTTTATAGTCCTCTAAAATCTAGGTaGTCCCACCCACCAAAGGCATATCCTGCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: VNMAFYSPLKSR*SHPPKAYPAKG
Trigger: GCCCTTTGCAGGATATGCCTTTGGTGGGTGGGAGCACCTAGATTTTAGAGGACTATAAAACGCCATGTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GTCAAGCTTATTCATTCCTGTGTGACTGTGCACGCCTaGTCAACATTCTCATACTCTCCTGTGTCAGCTTAC +
Preference number: 3 (lower is better)
Translates to: VKLIHSCVTVHA*STFSYSPVSAY
Trigger: GTAAGCTGACACAGGAGAGTATGAGAATGTTGAGCAGGCGTGCACAGTCACACAGGAATGAATAAGCTTGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp CTTTACCTGCATTGCTGGACTTCTGTGCATGTTGGATaGAATTGTCTCACACCAACACGAGTGTGTGTGTCA +
Preference number: 3 (lower is better)
Translates to: LYLHCWTSVHVG*NCLTPTRVCVS
Trigger: TGACACACACACTCGTGTTGGTGTGAGACAATTGCATCCAACATGCACAGAAGTCCAGCAATGCAGGTAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp AAAAGTCGACTCAAGATCAACGCCTCTAATTTGCCTCAGTTAGCTGCCCATCAGATCTGCAGGACATTGTaGGCCAAGGTGTTTATCAGA +
Preference number: 3 (lower is better)
Translates to: KSRLKINASNLPQLAAHQICRTL*AKVFIR
Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTGCAGAT...CTGATGGGCAGCTAACTGAGGCAAATTAGAGGCGTTGATCTTGAGTCGACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444584.1
3UTR TCA 72 bp AAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTaGACTGTCTTGGGTCCCCTTTCCATGTATGTTTTC +
Preference number: 3 (lower is better)
Translates to: KAYPAKGCELSW*TVLGPLSMYVF
Trigger: GAAAACATACATGGAAAGGGGACCCAAGACAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp GTCACCATTTCAATATGCAAGAGGTCACTCCATCATTaGGGAACCAGTGGCACCCTGGGCTCAACTATTTTA +
Preference number: 3 (lower is better)
Translates to: VTISICKRSLHH*GTSGTLGSTIL
Trigger: TAAAATAGTTGAGCCCAGGGTGCCACTGGTTCCTCAATGATGGAGTGACCTCTTGCATATTGAAATGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp ATGAAAAGTGTCTCACAAGAGACATCACTACCCACGTaGGGTCTGGCTGCTTTCTACCAAAGACATTTAGAG +
Preference number: 3 (lower is better)
Translates to: MKSVSQETSLPT*GLAAFYQRHLE
Trigger: CTCTAAATGTCTTTGGTAGAAAGCAGCCAGACCCCACGTGGGTAGTGATGTCTCTTGTGAGACACTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp TTCCAGCAGTTTTCTCGGGAAACACCTCTCCAAAAGTaGCAGTCGTTAATCCTCAACCACAACAATGGTCTA +
Preference number: 3 (lower is better)
Translates to: FQQFSRETPLQK*QSLILNHNNGL
Trigger: TAGACCATTGTTGTGGTTGAGGATTAACGACTGCCACTTTTGGAGAGGTGTTTCCCGAGAAAACTGCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTGGCAGAAAGATCCATTaGTTCAGACTCAGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIGRKIH*FRLSLL
Trigger: AAGCAAGCTGAGTCTGAACAAATGGATCTTTCTGCC...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
3UTR-3UTR CAA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGQLFPN*VTKVDS
Trigger: TGAGTCGACTTTTGTGACCAAATTTGGAAACAATTG...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR TCA 72 bp GTAATCACTGCTACAATCAGCTCACCTGATCATCTGTaGATTCAGGTGTTCAGAGCCTCCTGGTATGATGTT +
Preference number: 3 (lower is better)
Translates to: VITATISSPDHL*IQVFRASWYDV
Trigger: AACATCATACCAGGAGGCTCTGAACACCTGAATTCACAGATGATCAGGTGAGCTGATTGTAGCAGTGATTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp GAGAATATGTCAAAGGGATACACAGAGGAGCCAGTCTaGAAGAGCTCCAAAGGTCAAAGCTGGAACAATTTG +
Preference number: 3 (lower is better)
Translates to: ENMSKGYTEEPV*KSSKGQSWNNL
Trigger: CAAATTGTTCCAGCTTTGACCTTTGGAGCTCTTTCAGACTGGCTCCTCTGTGTATCCCTTTGACATATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp ACATTACTGGCAACAGACTGCTCCCTCAAGTTCCCCTaGATGGTTTTTACTCAACTCATAATACCACCAACT +
Preference number: 3 (lower is better)
Translates to: TLLATDCSLKFP*MVFTQLIIPPT
Trigger: AGTTGGTGGTATTATGAGTTGAGTAAAAACCATCCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR CCA 72 bp TCTCTCAGCTTCATAGAACGGGTAACTAGTGCAGGATaGGGAAATGTTCACAGACATCATCTGTATGTGGTT +
Preference number: 3 (lower is better)
Translates to: SLSFIERVTSAG*GNVHRHHLYVV
Trigger: AACCACATACAGATGATGTCTGTGAACATTTCCCCATCCTGCACTAGTTACCCGTTCTATGAAGCTGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp CTACCAGATGTGATCATTTCAGCTACCCAGATGGGTTaGTTGTTGGCAAATGCTAGCTGCCATTTCTTGATA +
Preference number: 3 (lower is better)
Translates to: LPDVIISATQMG*LLANASCHFLI
Trigger: TATCAAGAAATGGCAGCTAGCATTTGCCAACAACCAACCCATCTGGGTAGCTGAAATGATCACATCTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp CTGCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAAGCATCTGCAGGACATaGTTGGCCAAGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: LQLFPNLVTKVDSRSTPLSICRT*LAKVFI
Trigger: GATAAACACCTTGGCCAACAATGTCCTGCAGATGCT...TAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413635.5
ENST00000444584.1
3UTR TCA 72 bp CAGTTGTGGTGCAGTGGAAAATTAAGTACTGAGCACTaGGTGAGAACTCTGCTGTTATTAACTAGCTGTTCA +
Preference number: 3 (lower is better)
Translates to: QLWCSGKLSTEH*VRTLLLLTSCS
Trigger: TGAACAGCTAGTTAATAACAGCAGAGTTCTCACTCAGTGCTCAGTACTTAATTTTCCACTGCACCACAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 72 bp AATAGGTATAATTGGGTCATACACTTGACGAGAGGGTaGCTGTTTCTAGGGGAAGAAAACCCTTTAGATTGC +
Preference number: 3 (lower is better)
Translates to: NRYNWVIHLTRG*LFLGEENPLDC
Trigger: GCAATCTAAAGGGTTTTCTTCCCCTAGAAACAGTCACCCTCTCGTCAAGTGTATGACCCAATTATACCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp TCATCTGTGAATTCAGGTGTTCAGAGCCTCCTGGTATaGTGTTATTCAGGTAGTGTCCAGCTATATGTGTAT +
Preference number: 3 (lower is better)
Translates to: SSVNSGVQSLLV*CYSGSVQLYVY
Trigger: ATACACATATAGCTGGACACTACCTGAATAACATCATACCAGGAGGCTCTGAACACCTGAATTCACAGATGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp TTCCTCTTTTCAAAGTACCTGAACCACCATCGTGCATaGTTAGCTCCACGAAATAAACTACCAGATGTGATC +
Preference number: 3 (lower is better)
Translates to: FLFSKYLNHHRA*LAPRNKLPDVI
Trigger: GATCACATCTGGTAGTTTATTTCGTGGAGCTAATCATGCACGATGGTGGTTCAGGTACTTTGAAAAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp GTTTACAGAATTCGGATGGCTAAAGAAAAACCCCTTTaGCTTACCAAATTACTAATGGTGAGATCCGTGTGC +
Preference number: 3 (lower is better)
Translates to: VYRIRMAKEKPL*LTKLLMVRSVC
Trigger: GCACACGGATCTCACCATTAGTAATTTGGTAAGGCAAAGGGGTTTTTCTTTAGCCATCCGAATTCTGTAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAGATAATCTGGGAAGAC +
Preference number: 3 (lower is better)
Translates to: FIICILHSTLLE*NPQGLQIIWED
Trigger: GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
3UTR-3UTR CAA 90 bp GCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATATCTGCAGGACATTGTaGGCCAAGGTGTTTATCAGA +
Preference number: 3 (lower is better)
Translates to: AIVSKFGHKSRLKINASNICRTL*AKVFIR
Trigger: TCTGATAAACACCTTGGCCAACAATGTCCTGCAGAT...ATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413635.5
ENST00000444584.1
3UTR-3UTR CAA 90 bp GTGAACAGCACCTCTCCATTGCTACATCTCCAGAATATTGTTCGGTTATGTTCATTCCACAAATTAAGATaGCACTTAGTACACGCCTTT +
Preference number: 3 (lower is better)
Translates to: VNSTSPLLHLQNIVRLCSFHKLR*HLVHAF
Trigger: AAAGGCGTGTACTAAGTGCAATCTTAATTTGTGGAA...TGAACATAACCGAACAATATTCTGGAGATGTAGCAATGGAGAGGTGCTGTTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp TTTTATAAGGCTCTCTCCAATAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGTAATATAACATTTTTA +
Preference number: 3 (lower is better)
Translates to: FYKALSNKAAVL*SCQCWSNITFL
Trigger: TAAAAATGTTATATTACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTTATTGGAGAGAGCCTTATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR GCA 72 bp GGCAGTGCAAACAGGTGCTTATTAGAGGTAGTGACTTaGTTAATTAGTGACACTCCTAATTTCTACTATGGA +
Preference number: 3 (lower is better)
Translates to: GSANRCLLEVVT*LISDTPNFYYG
Trigger: TCCATAGTAGAAATTAGGAGTGTCACTAATTAAGCAAGTCACTACCTCTAATAAGCACCTGTTTGCACTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp AAATTAAAAAGTGATGTTCCTCCACTCATCTGGAGGTaGTTTAATGGCACACAAGGAACATTACTGGCAACA +
Preference number: 3 (lower is better)
Translates to: KLKSDVPPLIWR*FNGTQGTLLAT
Trigger: TGTTGCCAGTAATGTTCCTTGTGTGCCATTAAACCACCTCCAGATGAGTGGAGGAACATCACTTTTTAATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR CCA 72 bp ACATTACGTTTTATGCGTGTGCAGTTTGGTATAACGTaGAGTCAGTGCTCTAACGACACACTATACTTCTAT +
Preference number: 3 (lower is better)
Translates to: TLRFMRVQFGIT*SQCSNDTLYFY
Trigger: ATAGAAGTATAGTGTGTCGTTAGAGCACTGACTCCACGTTATACCAAACTGCACACGCATAAAACGTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp AATATGCAAGAGGTCACTCCATCATTGAGGAACCAGTaGCACCCTGGGCTCAACTATTTTATTTTTACTAAT +
Preference number: 3 (lower is better)
Translates to: NMQEVTPSLRNQ*HPGLNYFIFTN
Trigger: ATTAGTAAAAATAAAATAGTTGAGCCCAGGGTGCCACTGGTTCCTCAATGATGGAGTGACCTCTTGCATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp CTGCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTACAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: LQLFPNLVTKVDSRSTPLQLFPN*VTKVDS
Trigger: TGAGTCGACTTTTGTGACCAAATTTGGAAACAATTG...TAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000413635.5
ENST00000444584.1
3UTR-3UTR CAA 90 bp AACAAAGTAAACATGGCGTTTTATAGTCCTCTAAAATCTAGGTGCTCCCACCCAAGGCTAGTTAGTGGTTaGTCTTTTAGATTCACTTCT +
Preference number: 3 (lower is better)
Translates to: NKVNMAFYSPLKSRCSHPRLVSG*SFRFTS
Trigger: AGAAGTGAATCTAAAAGACAAACCACTAACTAGCCT...TGGGTGGGAGCACCTAGATTTTAGAGGACTATAAAACGCCATGTTTACTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp AGTAGAATCACTCTATGCTTAGAGTTTTGGCACCAATaGTGTAGGGCAGCAGAATCTATTCTCAGTAAAATA +
Preference number: 3 (lower is better)
Translates to: SRITLCLEFWHQ*CRAAESILSKI
Trigger: TATTTTACTGAGAATAGATTCTGCTGCCCTACAGCATTGGTGCCAAAACTCTAAGCATAGAGTGATTCTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp TTTATGCGTGTGCAGTTTGGTATAACGTGGAGTCAGTaGTCTAACGACACACTATACTTCTATATGCTTTTT +
Preference number: 3 (lower is better)
Translates to: FMRVQFGITWSQ*SNDTLYFYMLF
Trigger: AAAAAGCATATAGAAGTATAGTGTGTCGTTAGAGCACTGACTCCACGTTATACCAAACTGCACACGCATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CCA 72 bp GTTTTTCTAGATAGTGAAGGAAATGATAGTCATAGTTaGTCTGAACTCCAAGATCCTACTCCTCAAAACAGC +
Preference number: 3 (lower is better)
Translates to: VFLDSEGNDSHS*SELQDPTPQNS
Trigger: GCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATGACTATCATTTCCTTCACTATCTAGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR-3UTR CAA 90 bp TTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCTAATTTGCCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: LFPNLVTKVDSRSTPLICQLFPN*VTKVDS
Trigger: TGAGTCGACTTTTGTGACCAAATTTGGAAACAATTG...GCAAATTAGAGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000413635.5
ENST00000444584.1
3UTR-3UTR CAA 90 bp AAACTGCAATTGTTTCCAAATTTGGTCACAAAAGTCGACTCAAGATCAACGCCTCAATTGTTTCCAAATTaGGTCACAAAAGTCGACTCA +
Preference number: 3 (lower is better)
Translates to: KLQLFPNLVTKVDSRSTPQLFPN*VTKVDS
Trigger: TGAGTCGACTTTTGTGACCAAATTTGGAAACAATTG...AGGCGTTGATCTTGAGTCGACTTTTGTGACCAAATTTGGAAACAATTGCAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000413635.5
ENST00000431886.5
ENST00000441061.5
ENST00000444584.1
3UTR-3UTR CAA 90 bp GTATTTATAAGTGTCTGTCCATGTGTAGCCTATTCGTGCATGTTGTGTATTATAGTTCTTACCGTGCCCTaGCAAGGTCTATATGTAAAA +
Preference number: 3 (lower is better)
Translates to: VFISVCPCVAYSCMLCIIVLTVP*QGLYVK
Trigger: TTTTACATATAGACCTTGCAAGGGCACGGTAAGAAC...TATAATACACAACATGCACGAATAGGCTACACATGGACAGACACTTATAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR TCA 72 bp ACATTTCATCATCCTTATAATCCACAAACAGAAACATaGAGGGATGCAAGTGAGTTCAGCATTCACTCGTTT +
Preference number: 3 (lower is better)
Translates to: TFHHPYNPQTET*RDASEFSIHSF
Trigger: AAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGGATTATAAGGATGATGAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
3UTR TCA 72 bp TTAAGATTGCACTTAGTACACGCCTTTACACAACTCTaGTGGTATTTACCAAAACATGGCATGTCTTTTCAC +
Preference number: 3 (lower is better)
Translates to: LRLHLVHAFTQL*WYLPKHGMSFH
Trigger: GTGAAAAGACATGCCATGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGCGTGTACTAAGTGCAATCTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 72 bp ACATTACTTGGAAAGAATCTTTGTACTCAGAAACCATaGAGAAGCTGCACTCCTTCAGATTCCTATATCCTT +
Preference number: 3 (lower is better)
Translates to: TLLGKNLCTQKP*RSCTPSDSYIL
Trigger: AAGGATATAGGAATCTGAAGGAGTGCAGCTTCTTCATGGTTTCTGAGTACAAAGATTCTTTCCAAGTAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp AGTCTGTGCCTATTGTTAATGATTACCAATGCAAACTaGAGAAATCAGTTGACATTGTCCCACAAGGAAAAA +
Preference number: 3 (lower is better)
Translates to: SLCLLLMITNAN*RNQLTLSHKEK
Trigger: TTTTTCCTTGTGGGACAATGTCAACTGATTTCTGCAGTTTGCATTGGTAATCATTAACAATAGGCACAGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR GCA 72 bp ACTTATAAGGGGAGCACATCTTGTAATGAAAGTCTGTaGCTATTGTTAATGATTACCAATGCAAACTGCAGA +
Preference number: 3 (lower is better)
Translates to: TYKGSTSCNESL*LLLMITNANCR
Trigger: TCTGCAGTTTGCATTGGTAATCATTAACAATAGGCACAGACTTTCATTACAAGATGTGCTCCCCTTATAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR-3UTR CAA 90 bp TTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATTTATTGTACCACACACTACTACACTaGTTCACTTTTCAATCAAGT +
Preference number: 3 (lower is better)
Translates to: LKLSALQTPLNLKLYLLYHTLLH*FTFQSS
Trigger: ACTTGATTGAAAAGTGAACAAGTGTAGTAGTGTGTG...GTACAATAAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR TCA 72 bp TTAAGTGGAATATTAACTTCTGCATCCGACACCATCTaGATTTTCTCACACACTACTACACTTGTTCACTTT +
Preference number: 3 (lower is better)
Translates to: LSGILTSASDTI*IFSHTTTLVHF
Trigger: AAAGTGAACAAGTGTAGTAGTGTGTGAGAAAATTCAGATGGTGTCGGATGCAGAAGTTAATATTCCACTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR GCA 72 bp CTTATACTGACTACAGTAGTGATGATTAAAGTTATCTaGCCTACAGACTCCACTGAATTTGAAGCTGTATTT +
Preference number: 3 (lower is better)
Translates to: LILTTVVMIKVI*PTDSTEFEAVF
Trigger: AAATACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCATCACTACTGTAGTCAGTATAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
3UTR CCA 72 bp AATTGTATAGTCAATAGGTTTTCTAATATAACGAACTaGTCGTTCAAGGTTGGCTGGAGCAATAATCTTATG +
Preference number: 3 (lower is better)
Translates to: NCIVNRFSNITN*SFKVGWSNNLM
Trigger: CATAAGATTATTGCTCCAGCCAACCTTGAACGACCAGTTCGTTATATTAGAAAACCTATTGACTATACAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR GCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp TGGAGGTGTTGTACGCGGCAGCCCACCCATCTTCATGTTCTGGGTACTCACCTTCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: WRCCTRQPTHLHVLGTHLQEGEE*QQSQQG
Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...AAGGTGAGTACCCAGAACATGAAGATGGGTGGGCTGCCGCGTACAACACCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR GCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCQEGEE*QQSQQG
Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TACCACTGGAGGACGCACTGGCTCCAGTGTGCGATAGGGGGAGTGCCGCCCAAGTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 4 (lower is better)
Translates to: YHWRTHWLQCAIGGVPPKSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...CTTGGGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR GCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSQEGEE*QQSQQG
Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALQEGEE*QQSQQG
Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAAGGAGCAGGGGCAGATaGAGAAGTAGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQARSRGR*RSSRKG
Trigger: CCCCTTCCTGCTACTTCTGCATCTGCCCCTGCTCCT...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCCCAGCAGCAGCGTCTaGGGCAGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLPSSSV*GSGGRD
Trigger: GTCCCTTCCTCCACTGCCCCAGACGCTGCTGCTGGG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
3UTR CAA 72 bp CACTTCCACTGTTCTCTCGACTGCTGCTCCGACTACTaGGGTGGCTCCCTCCACTACTCCCACTGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: HFHCSLDCCSDY*GGSLHYSHCCQ
Trigger: TTGGCAGCAGTGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTGGAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
3UTR CAA 72 bp AAGGAGGGCGTCTATAGGGCAACGAGCCCCCTATTGTaGGGGGAGTATGGCGAGAGGCAGGCCTATTCATGC +
Preference number: 4 (lower is better)
Translates to: KEGVYRATSPLL*GEYGERQAYSC
Trigger: GCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR TCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACTCCTCCATCCGATTCTaGTTTTCCACCCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYSSIRF*FSTPST
Trigger: GGTGGAGGGGGTGGAAAATCAGAATCGGATGGAGGA...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCCCTCCTCCCCCTCCTaGAAGCAGCCTGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLPSSPS*KQPGVS
Trigger: GGAAACACCAGGCTGCTTTCAGGAGGGGGAGGAGGG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACTCTTTCACTGCCCTCTaGTCTGCAGCTCTCACCCAG +
Preference number: 4 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYSFTAL*SAALTQ
Trigger: CTGGGTGAGAGCTGCAGAGCAGAGGGCAGTGAAAGA...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCATTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAGGAGGCCGAGGTGGGTaGATCGCGAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPGGRGG*IARSGD
Trigger: ATCTCCTGACCTCGCGATCCACCCACCTCGGCCTCC...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGTTAACCCCAGTCCAGTaGCTTGTCCGACAACAGGCC +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKLTPVQ*LVRQQA
Trigger: GGCCTGTTGTCGGACAAGCCACTGGACTGGGGTTAA...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCGCCTGGATTCCTGGCTaGCCTCAACAGGACACTGCA +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIAWIPG*PQQDTA
Trigger: TGCAGTGTCCTGTTGAGGTCAGCCAGGAATCCAGGC...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCCCCCGCCTCCTCCACTaGAGATCCATCAAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGPRLLH*RSIKFS
Trigger: GCTGAACTTGATGGATCTTCAGTGGAGGAGGCGGGG...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPLTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCAGGAGCAGGGGCAGATaGAGAAGTAGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTARSRGR*RSSRKG
Trigger: CCCCTTCCTGCTACTTCTGCATCTGCCCCTGCTCCT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCAGGAGCAGGGGCAGATaGAGAAGTAGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSRSRGR*RSSRKG
Trigger: CCCCTTCCTGCTACTTCTGCATCTGCCCCTGCTCCT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACACTGCCCTCTGCTCTaGAGCTCTCACCCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPHCPLL*SSHPAW
Trigger: CCAAGCTGGGTGAGAGCTGCAGAGCAGAGGGCAGTG...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCCAGTTGTGCCACAAGTaGCCACCTCTCCCAAATCCA +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACQLCHK*PPLPNP
Trigger: TGGATTTGGGAGAGGTGGGCACTTGTGGCACAACTG...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GTTTCATTTATAGCTACTGGGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTGTGATCTCAGCTCACTaGAGCCTTCGCCTCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VSFIATGATRTLADCSLVVISAH*SLRLPG
Trigger: ACCCGGGAGGCGAAGGCTGCAGTGAGCTGAGATCAC...AACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCCCAGTAGCTATAAATGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTARGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp AGTAATGGAAGGAGGGCGTCTATAGGGCAACGAGCCCCCTATTGTTGGGGGAGTTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SNGRRASIGQRAPYCWGSWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...ACTCCCCCAACAATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTTCCATTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGACTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNITWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPRASRG*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR CCA 90 bp CCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTCGTCCCAGCAGCAGCGTCTaGGGCAGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLQHKDHYTQPQQLPPLRPSSSV*GSGGRD
Trigger: GTCCCTTCCTCCACTGCCCCAGACGCTGCTGCTGGG...ACGAAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR TCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR TCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR TCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAATTTATTGACCTCATaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKNLLTS*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCATGAGGTCAATAAATT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCELTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLLTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCGTCCAAAAGACCAGCTaGATTCCTGCTGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPVQKTS*IPADRH
Trigger: GTGGCGGTCAGCAGGAATGCAGCTGGTCTTTTGGAC...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGKAAVL*SCQCWS
Trigger: ACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTT...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGAGGAGCAGGGGCAGATaGAGAAGTAGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRRSRGR*RSSRKG
Trigger: CCCCTTCCTGCTACTTCTGCATCTGCCCCTGCTCCT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp TTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACTTCGAGATCCACCTaGCTCAGCCTCCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LGTFVSSFTHPPPHMNQPTSRST*LSLPEC
Trigger: GCACTCTGGGAGGCTGAGGCAGGTGGATCTCGAAGT...AGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACACTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGCTGTACAGGATGACCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKLYRMT*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGGTCATCCTGTACAG...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261017.9
CDS-3UTR CCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp TTGATTCACAGAAGCTGTCCTCACAGGGCTCTGCTGCGAGGGAGCCATATTACGTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LIHRSCPHRALLRGSHITFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...CGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRRASRG*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCCAGCAGCAGCGTCTaGGGCAGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRPSSSV*GSGGRD
Trigger: GTCCCTTCCTCCACTGCCCCAGACGCTGCTGCTGGG...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR CCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGAGCCCCTGTTCTGAGTaGGCGTGGAAAGGACTCCGT +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCESPCSE*AWKGLR
Trigger: ACGGAGTCCTTTCCACGCCCACTCAGAACAGGGGCT...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GTTTCATTTATAGCTACTGGGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTCTCCTGAAAGCAGCCTaGTGTTTCCTCCTCCACCCC +
Preference number: 4 (lower is better)
Translates to: VSFIATGATRTLADCSLVLLKAA*CFLLHP
Trigger: GGGGTGGAGGAGGAAACACCAGGCTGCTTTCAGGAG...AACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCCCAGTAGCTATAAATGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAGCAGTGTACACAGGCTaGCAGGAAAACAGAACGCAT +
Preference number: 4 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGAVYTG*QENRTH
Trigger: ATGCGTTCTGTTTTCCTGTCAGCCTGTGTACACTGC...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGATCGTAAACAGAGAGTaGACAGCACCTCTCCATTGC +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKIVNRE*TAPLHC
Trigger: GCAATGGAGAGGTGCTGTTCACTCTCTGTTTACGAT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGACAAAAGCCCCTGTTCTaGGTGGGCGTGGAAAGGACT +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRQKPLF*VGVERT
Trigger: AGTCCTTTCCACGCCCACTCAGAACAGGGGCTTTTG...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTGAACTGGAGCTCCGTATTCTCTaGAGCCTGGAAACGAGGCAC +
Preference number: 4 (lower is better)
Translates to: PTHQRHILQRAVNYLGELELRIL*SLETRH
Trigger: GTGCCTCGTTTCCAGGCTTCAGAGAATACGGAGCTC...CAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTCCCATGGACTACCCCTaGTCCCAACCACAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTPMDYP*SQPQVF
Trigger: GAAGACCTGTGGTTGGGAGCAGGGGTAGTCCATGGG...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATCAGGAAGGGGAGGAGTaGCAGCAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDQEGEE*QQSQQG
Trigger: CCCCTGCTGGCTCTGCTGGCACTCCTCCCCTTCCTG...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTAGGAGCAGGGGCAGATaGAGAAGTAGCAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSRSRGR*RSSRKG
Trigger: CCCCTTCCTGCTACTTCTGCATCTGCCCCTGCTCCT...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCCTCACCCAGCTTGGCTaGTTCAAGTCTGTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGLTQLG*FKSVQL
Trigger: CAACTGCACAGACTTGAAGCAGCCAAGCTGGGTGAG...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGGCAACAGAGCTTCTGTaGAAAACCCCCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRATELL*KTPSLS
Trigger: GGAGAGGGAGGGGGTTTTGCACAGAAGCTCTGTTGC...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCGCAGCCAGCTTTCCCTaGTTCTTACATTCCACCCTC +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGAASFP*FLHSTL
Trigger: GAGGGTGGAATGTAAGAAGCAGGGAAAGCTGGCTGC...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCCTACACTTCACTTGTaGCCCCTTTATCCCCGCAAC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSPTLHL*PLYPRN
Trigger: GTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCCCTTGGAAGTCCAGTaGTCAGAGGACCGCCACAGA +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDPLEVQ*SEDRHR
Trigger: TCTGTGGCGGTCCTCTGAGCACTGGACTTCCAAGGG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp AGTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTCACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: SHKLPQPFPSKNVEPTVGHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...ACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGACGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TGGAGGTGTTGTACGCGGCAGCCCACCCATCTTCATGTTCTGGGTACTCACCTTAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: WRCCTRQPTHLHVLGTHLRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...AAGGTGAGTACCCAGAACATGAAGATGGGTGGGCTGCCGCGTACAACACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR CCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACATGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATTT +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAGVSPC*PGWSQF
Trigger: AAATTGAGACCATCCTGGCCAACATGGTGAAACCCC...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCCAGCAGCAGCGTCTaGGGCAGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIPSSSV*GSGGRD
Trigger: GTCCCTTCCTCCACTGCCCCAGACGCTGCTGCTGGG...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACCAACAGCCACCATaGATGATATGGCATTGCCTC +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKNQQPP*MIWHCL
Trigger: GAGGCAATGCCATATCATCCATGGTGGCTGTTGGTT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGCCTAAGTTACAATTCTaGCGTGACCTTAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKPKLQF*RDLKAG
Trigger: CCCTGCCTTAAGGTCACGCCAGAATTGTAACTTAGG...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 72 bp AGAGCAGAACCAACAGCCACCATGGATGATATGGCATaGCCTCCACCACCCCCTGAACTGCTGTCTGATCAA +
Preference number: 4 (lower is better)
Translates to: RAEPTATMDDMA*PPPPPELLSDQ
Trigger: TTGATCAGACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTGGTTCTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGCCCATTAAAGGTAACTaGGGAGTTACCTGTAGGATG +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKPIKGN*GVTCRM
Trigger: CATCCTACAGGTAACTCCTCAGTTACCTTTAATGGG...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR TCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp AGTAATGGAAGGAGGGCGTCTATAGGGCAACGAGCCCCCTATTGTTGGGGGAGTACCTTGTACTCCCAGTaGCTGTCAGGAGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SNGRRASIGQRAPYCWGSTLYSQ*LSGDLK
Trigger: TTTCAAGTCTCCTGACAGTCACTGGGAGTACAAGGT...ACTCCCCCAACAATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTTCCATTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR TCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGGGCCCAACATCACAGTaGCCACCCACAAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRGPTSQ*PPTKRQ
Trigger: TTGTCTCTTTGTGGGTGGTCACTGTGATGTTGGGCC...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTCCAAGTCACTGGGACTaGGTAGAACCCACGTTAGCA +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPPSHWD*VEPTLA
Trigger: TGCTAACGTGGGTTCTACTCAGTCCCAGTGACTTGG...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGACCAAGTCACTGGGACTaGGTAGAACCCACGTTAGCA +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRPSHWD*VEPTLA
Trigger: TGCTAACGTGGGTTCTACTCAGTCCCAGTGACTTGG...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CAACAGCCACCATGGATGATATGGCATTGCCTCCACCACCCCCTGAACTGCTGTGGAAAAAGGAGGGGATaGAAATGTCTCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: QQPPWMIWHCLHHPLNCCGKRRG*KCLTPS
Trigger: ACTGGGTGTGAGACATTTTCATCCCCTCCTTTTTCC...ACAGCAGTTCAGGGGGTGGTGGAGGCAATGCCATATCATCCATGGTGGCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGGATTGGCCTGCTTTaGCTCTCAGCCACCAACAGA +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSWIGLL*LSATNR
Trigger: TCTGTTGGTGGCTGAGAGTCAAAGCAGGCCAATCCA...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCTCACCTGATCATCTGTaGATTCAGGTGTTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTSPDHL*IQVFRA
Trigger: GGCTCTGAACACCTGAATTCACAGATGATCAGGTGA...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GTTTCATTTATAGCTACTGGGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTTGCAGTCACAGTCAGTaGAGCCTCAGATCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VSFIATGATRTLADCSLVCSHSQ*SLRSWY
Trigger: GTACCAGGATCTGAGGCTTCACTGACTGTGACTGCA...AACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCCCAGTAGCTATAAATGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAGGTCACTCCATCATTaGGGAACCAGTGGCACCCTG +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMRSLHH*GTSGTL
Trigger: CAGGGTGCCACTGGTTCCTCAATGATGGAGTGACCT...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACACACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: GTFVSSFTHPPPHMNQPTQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...GGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPSRGSG*LLRAFP
Trigger: TGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: VGPLQHKDHYTQPQQLPPKAAVL*SCQCWS
Trigger: ACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTT...AGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR GCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGKAAVL*SCQCWS
Trigger: ACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTT...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCATTACTGGCAACAGACTaGTCCCTCAAGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPLLATD*SLKFPW
Trigger: CCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAA...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCAGGACCCTTGCTGACTaGAGCCTGGTTGTGATTAGT +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIRTLAD*SLVVIS
Trigger: ACTAATCACAACCAGGCTGCAGTCAGCAAGGGTCCT...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCCAGGCTATGCAACGTTaGGGAGAGGACCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPQAMQR*GEDPLL
Trigger: CAGGAGGGGGTCCTCTCCGCAACGTTGCATAGCCTG...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATCCACCTCAGCCTGCTTaGTCACCTCAGCCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDPPQPA*SPQPPE
Trigger: CTCGGGAGGCTGAGGTGAGCAAGCAGGCTGAGGTGG...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQELRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp TTGATTCACAGAAGCTGTCCTCACAGGGCTCTGCTGCGAGGGAGCCATATTACGGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: LIHRSCPHRALLRGSHITDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...CGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCTGTACAGGATGACCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSLYRMT*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGGTCATCCTGTACAG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261017.9
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTARLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCCCATGTTGGCCAGGATaGTCTCAATTTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACPCWPG*SQFIDL
Trigger: GAGGTCAATAAATTGAGACCATCCTGGCCAACATGG...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYRASRG*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR CCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGRASRG*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
ENST00000430418.5
CDS-3UTR CCA 90 bp CTCAGCATTGTACAAATGATGGCAGAAAGATCCATTTGTTCAGACTCAGCTTGCCCCAGCAGCAGCGTCTaGGGCAGTGGAGGAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LSIVQMMAERSICSDSACPSSSV*GSGGRD
Trigger: GTCCCTTCCTCCACTGCCCCAGACGCTGCTGCTGGG...GCAAGCTGAGTCTGAACAAATGGATCTTTCTGCCATCATTTGTACAATGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGTCTGTCAATCATACGTaGTTGTGGAAACTGCACCTG +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKSVNHT*LWKLHL
Trigger: CAGGTGCAGTTTCCACAACCACGTATGATTGACAGA...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAACATCACTACCCACGTaGGGTCTGGCTGCTTTCTAC +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPTSLPT*GLAAFY
Trigger: GTAGAAAGCAGCCAGACCCCACGTGGGTAGTGATGT...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAAGCTCTCACCCAGCTTaGCTGCTTCAAGTCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTSSHPA*LLQVCA
Trigger: TGCACAGACTTGAAGCAGCCAAGCTGGGTGAGAGCT...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCACAGTTTGGTATAACGTaGAGTCAGTGCTCTAACGAC +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAQFGIT*SQCSND
Trigger: GTCGTTAGAGCACTGACTCCACGTTATACCAAACTG...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACATCTGGCTATTTTGCCTaGGCTGGTCTCGAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTSGYFA*AGLELL
Trigger: CAGGAGTTCGAGACCAGCCCAGGCAAAATAGCCAGA...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCGTATTCTCTGAAGCCTaGAAACGAGGCACTCAGTTG +
Preference number: 4 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTVFSEA*KRGTQL
Trigger: CAACTGAGTGCCTCGTTTCCAGGCTTCAGAGAATAC...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGAGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCACCTTGTACTCCCAGTaGCTGTCAGGAGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGTLYSQ*LSGDLK
Trigger: TTTCAAGTCTCCTGACAGTCACTGGGAGTACAAGGT...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGGGCCCAACATCACAGTaGCCACCCACAAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMGPTSQ*PPTKRQ
Trigger: TTGTCTCTTTGTGGGTGGTCACTGTGATGTTGGGCC...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACAAATTTATTGACCTCATaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTNLLTS*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCATGAGGTCAATAAATT...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCACAAAAAGACCAGAAGTaGGCAGATCCCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAQKDQK*ADPILF
Trigger: GAAAAGAATGGGATCTGCTCACTTCTGGTCTTTTTG...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGAGGTGGAGCTTGCAGTaGGCTGAAATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGRWSLQ*AEIVPL
Trigger: CAGTGGCACAATTTCAGCTCACTGCAAGCTCCACCT...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGTACAATCAGCTCACCTaGTCATCTGTGAATTCAGGT +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKYNQLT*SSVNSG
Trigger: ACCTGAATTCACAGATGATCAGGTGAGCTGATTGTA...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCAGAATGGAGTCTATaGATCGGCCCTACACTTCAC +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQPEWSL*IGPTLH
Trigger: GTGAAGTGTAGGGCCGATTCATAGACTCCATTCTGG...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAGTTCCCAGAGCATTGTaGGCTCCGTATTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPVPRAL*APYSLK
Trigger: CTTCAGAGAATACGGAGCTCACAATGCTCTGGGAAC...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCTTCTAGGGCTCTCTGCTTATCTGCTGACATGTTGCTCAGGCTAGTCTTCCCAGCTAGTCTTCCCACCTaGGCTCCAGCAATCCTCTTA +
Preference number: 4 (lower is better)
Translates to: SSRALCLSADMLLRLVFPASLPT*APAILL
Trigger: TAAGAGGATTGCTGGAGCTCAGGTGGGAAGACTAGC...TGGGAAGACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425253.1
CDS-3UTR GCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGATGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGTGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGGTCCAAAAGACCAGCTaGATTCCTGCTGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRVQKTS*IPADRH
Trigger: GTGGCGGTCAGCAGGAATGCAGCTGGTCTTTTGGAC...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCCCCATGGACTACCCCTaGTCCCAACCACAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPPMDYP*SQPQVF
Trigger: GAAGACCTGTGGTTGGGAGCAGGGGTAGTCCATGGG...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAAGGCTGCTGTGCTGTaGTCCTGCCAGTGTTGGAGT +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGKAAVL*SCQCWS
Trigger: ACTCCAACACTGGCAGGAGCACAGCACAGCAGCCTT...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCCACGTGGGGTCTGGCTaGTTTCTACCAAAGACATTT +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGHVGSG*FLPKTF
Trigger: AAATGTCTTTGGTAGAAAGCAGCCAGACCCCACGTG...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCGCTGTAAACCCCCAGTaGCTTCAACTCTTTTGGCAG +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSAVNPQ*LQLFWQ
Trigger: CTGCCAAAAGAGTTGAAGGCACTGGGGGTTTACAGC...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTAAAGCCTGCACCGTGTaGCCCATCCCTTCCACAGTT +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPKACTV*PIPSTV
Trigger: AACTGTGGAAGGGATGGGGCACACGGTGCAGGCTTT...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGAACACGGCTACAGAATaGGTCTCAGCATTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGNTATE*VSAFRG
Trigger: GCCCCTGAATGCTGAGACGCATTCTGTAGCCGTGTT...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGTACCTCAGTCTCAGGTaGCAAATGAGAAGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRYLSLR*QMRRPA
Trigger: TGCTGGCCTTCTCATTTGGCACCTGAGACTGAGGTA...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAAAGGTCTGGCTATTTTaGCTGGGCTGGTCTCGAACT +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRKVWLF*LGWSRT
Trigger: AGTTCGAGACCAGCCCAGGCAAAATAGCCAGACCTT...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCCAAAGAGACACTGTATaGTCACAGCCATTCCCACCA +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIQRDTV*SQPFPP
Trigger: TGGTGGGAATGGCTGTGAGCATACAGTGTCTCTTTG...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCATCTGCAGGACATTGTTaGCCAAGGTGTTTATCAGAT +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQASAGHC*PRCLSD
Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTGCAGA...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTARYVII*YHWRTH
Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSRYVII*YHWRTH
Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp ACCCTTTCTACAGCTAAGCGAGTCAGTAATACAGCAGCAACTAATACTGGCCATCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TLSTAKRVSNTAATNTGHRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...ATGGCCAGTATTAGTTGCTGCTGTATTACTGACTCGCTTAGCTGTAGAAAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp CCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTCGTCTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLQHKDHYTQPQQLPPLRLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...ACGAAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: GTFVSSFTHPPPHMNQPTGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...GGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCACCACACCCAGCCTGTaGGAACTATTTATTGGATTT +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACTTPSL*ELFIGF
Trigger: AAATCCAATAAATAGTTCCCACAGGCTGGGTGTGGT...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGACCACACCCAGCCTGTaGGAACTATTTATTGGATTT +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKTTPSL*ELFIGF
Trigger: AAATCCAATAAATAGTTCCCACAGGCTGGGTGTGGT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATTT +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIGVSPC*PGWSQF
Trigger: AAATTGAGACCATCCTGGCCAACATGGTGAAACCCC...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCCTGTCAACTCTAAAATaGGAACAGCAGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSLSTLK*EQQAPL
Trigger: CAGAGGCGCCTGCTGTTCCCATTTTAGAGTTGACAG...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCGTTCCTCCACTCATCTaGAGGTGGTTTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPVPPLI*RWFNGT
Trigger: TGTGCCATTAAACCACCTCCAGATGAGTGGAGGAAC...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCCTTGGTGAACTGTCTTaGGTCCCCTTTCCATGTATG +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGLGELS*VPFPCM
Trigger: CATACATGGAAAGGGGACCCAAGACAGTTCACCAAG...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGTGGAGTCAACCTTCCTaGAGTTCTCCAACAAGGGTG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLWSQPS*SSPTRV
Trigger: CACCCTTGTTGGAGAACTCCAGGAAGGTTGACTCCA...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GTTTCATTTATAGCTACTGGGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTGCTACCCAGATGGGTTaGTTGTTGGCAAATGCTAGC +
Preference number: 4 (lower is better)
Translates to: VSFIATGATRTLADCSLVATQMG*LLANAS
Trigger: GCTAGCATTTGCCAACAACCAACCCATCTGGGTAGC...AACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCCCAGTAGCTATAAATGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGATGTGGTTCACTAACTaGGCTCCCGCAGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGMWFTN*APAGKR
Trigger: TCTCTTCCCTGCGGGAGCCCAGTTAGTGAACCACAT...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTGAACTGTCATTGAGGAACCAGTaGCACCCTGGGCTCAACTAT +
Preference number: 4 (lower is better)
Translates to: PTHQRHILQRAVNYLGELSLRNQ*HPGLNY
Trigger: ATAGTTGAGCCCAGGGTGCCACTGGTTCCTCAATGA...CAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 72 bp GTTTCTTCTAGGGCTCTCTGCTTATCTGCTGACATGTaGCTCAGGCTAGTCTTCCCACCTGAGCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VSSRALCLSADM*LRLVFPPELQQ
Trigger: TTGCTGGAGCTCAGGTGGGAAGACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425253.1
CDS-3UTR TCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp TCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGAGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: SFVSFILLYWSGIPRAFRGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...TCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp GTGGAGGTGGTGTATCTGAAACTGGATTCTGGCTATAAAAAGGTCCTCCATTCAAAGTGTCCCTTTCCCTaGCATAGGGGGACTAGGGGG +
Preference number: 4 (lower is better)
Translates to: VEVVYLKLDSGYKKVLHSKCPFP*HRGTRG
Trigger: CCCCCTAGTCCCCCTATGTCAGGGAAAGGGACACTT...TGAATGGAGGACCTTTTTATAGCCAGAATCCAGTTTCAGATACACCACCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR TCA 90 bp TTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: LGTFVSSFTHPPPHMNQPQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...AGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp AACGTGGAGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: NVEPTVGPLQHKDHYTQPQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...TGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR TCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR TCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCCCACAAACAGAAACATaGAGGGATGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPPQTET*RDASEF
Trigger: GAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGG...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAACCTTGTACTCCCAGTaGCTGTCAGGAGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTTLYSQ*LSGDLK
Trigger: TTTCAAGTCTCCTGACAGTCACTGGGAGTACAAGGT...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCTTCCAAATGGGAGGCTaGATCTCTCAGATGTCGATT +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGFQMGG*ISQMSI
Trigger: AATCGACATCTGAGAGATTCAGCCTCCCATTTGGAA...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCTTCCAAATGGGAGGCTaGATCTCTCAGATGTCGATT +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIFQMGG*ISQMSI
Trigger: AATCGACATCTGAGAGATTCAGCCTCCCATTTGGAA...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCATGGAAAATTAAGTACTaGGCACTGAGTGAGAACTCT +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAWKIKY*ALSENS
Trigger: AGAGTTCTCACTCAGTGCTCAGTACTTAATTTTCCA...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACATCCTGCAAAGGGCTGTaGACTATCTTGGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTSCKGL*TILVNC
Trigger: ACAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGA...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCTTGACTTGGCTGTACTaGAAAGTGAACAGCATGGAT +
Preference number: 4 (lower is better)
Translates to: GTFVSSFTHPPPHMNQPTLTWLY*KVNSMD
Trigger: ATCCATGCTGTTCACTTTTCAGTACAGCCAAGTCAA...GGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGGTCTAAAATGTCAGTaGAGAAGGCCCCTCCACCCA +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPGLKCQ*RRPLHP
Trigger: TGGGTGGAGGGGCCTTCTTCACTGACATTTTAGACC...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCGTTATAGCATCTGCTTaGTGTGGATGCAGTCATGGA +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGVIASA*CGCSHG
Trigger: TCCATGACTGCATCCACATCAAGCAGATGCTATAAC...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCATTATTCATTCCTGTGTaGCTGTGCACGCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPLFIPV*LCTPAQ
Trigger: TTGAGCAGGCGTGCACAGTCACACAGGAATGAATAA...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTTCAGAGAGACCTGTTaGTTTGACTTCCCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSFRETC*FDFPLE
Trigger: TTCCAAGGGGAAGTCAAATCAACAGGTCTCTCTGAA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp AAGAAGGGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAGTTGTACACAGCACTTaGCCTTGTGTAAAAGATCTA +
Preference number: 4 (lower is better)
Translates to: KKGLGYPLGHEVNPLAQAVVHST*PCVKDL
Trigger: TAGATCTTTTACACAAGGTCAAGTGCTGTGTACAAC...TGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGTACTCAGAAACCATaGAGAAGCTGCACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPCTQKP*RSCTPS
Trigger: TGAAGGAGTGCAGCTTCTTCATGGTTTCTGAGTACA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTCTTCTAGGGCTCTCTaGTTATCTGCTGACTGTATG +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASSSRAL*LSADCM
Trigger: CATACAGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: TSNATDSAGGEIPRVYSILTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQEHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACACAATGCCACAGATTCTaGAGGAGGAGAAATCCCAAG +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTQCHRF*RRRNPK
Trigger: CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTG...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp ACCCTTTCTACAGCTAAGCGAGTCAGTAATACAGCAGCAACTAATACTGGCCATCCCATGGACTACCCCTaGTCCCAACCACAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: TLSTAKRVSNTAATNTGHPMDYP*SQPQVF
Trigger: GAAGACCTGTGGTTGGGAGCAGGGGTAGTCCATGGG...ATGGCCAGTATTAGTTGCTGCTGTATTACTGACTCGCTTAGCTGTAGAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCCCTTAATTGGCATATaGCCCAGATCCACAAAGCCG +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDPLIGI*PRSTKP
Trigger: CGGCTTTGTGGATCTGGGGCATATGCCAATTAAGGG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGAGAACGCATGGCATGTaGCCCTTAATTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQRTHGM*PLIGIC
Trigger: GCATATGCCAATTAAGGGGCACATGCCATGCGTTCT...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGATGGTGTGGATTGGCCTaGTTTGACTCTCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGWCGLA*FDSQPP
Trigger: TGGTGGCTGAGAGTCAAAGCAGGCCAATCCACACCA...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGACGACACTAGTACTGTaGCTTCTTTCACTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRTTLVL*LLSLPS
Trigger: AGAGGGCAGTGAAAGAAGGCACAGTACTAGTGTCGT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCCATCCTGAACAGATaGTTCTGGTCTGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCEAILNR*FWSVFL
Trigger: CAGGAAAACAGACCAGAAGCATCTGTTCAGGATGGC...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGTCATATATCAGGCTATaGAACGTTGCGGAGAGGACC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLSYIRL*NVAERT
Trigger: GGTCCTCTCCGCAACGTTGCATAGCCTGATATATGA...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACACCTGAACCACCATCGTaGATGATTAGCTCCACGAAA +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTPEPPS*MISSTK
Trigger: TTTCGTGGAGCTAATCATGCACGATGGTGGTTCAGG...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCCCCATCTTCATGTTCTaGGTACTCACCTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPPIFMF*VLTFTP
Trigger: TGGAGTAAAGGTGAGTACCCAGAACATGAAGATGGG...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCCCATCTTCATGTTCTaGGTACTCACCTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAPIFMF*VLTFTP
Trigger: TGGAGTAAAGGTGAGTACCCAGAACATGAAGATGGG...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATAAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: MKNIQCHRFCRRRNPKGIRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...TATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPRYVII*YHWRTH
Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTAGGTACGTAATCATTTaGTACCACTGGAGGACGCAC +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPRYVII*YHWRTH
Trigger: GTGCGTCCTCCAGTGGTACCAAATGATTACGTACCT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: IICILHSTLLEWNPQGLQAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CCCCTTTCGTTCACCATCTGTCAATCATACGTGGTTGTGGAAACTGCACCTGTAATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: PLSFTICQSYVVVETAPVIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...TACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGGTGAACGAAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCAGATTTTCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QEEKSQGYTVFLRKIPDFRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...AAAATCTGGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp TATAGTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: YSHKLPQPFPSKNVEPTVTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...CACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGACTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GTGGAGGTGGTGTATCTGAAACTGGATTCTGGCTATAAAAAGGTCCTCCATTCAACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: VEVVYLKLDSGYKKVLHSTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...TGAATGGAGGACCTTTTTATAGCCAGAATCCAGTTTCAGATACACCACCTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp AGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: SPRWVLFSIRITILNHSSGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACACACATCTGGGTACACTaGCCATTAGCAACAATGCAG +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTHIWVH*PLATMQ
Trigger: CTGCATTGTTGCTAATGGCCAGTGTACCCAGATGTG...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCCACATCTGGGTACACTaGCCATTAGCAACAATGCAG +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCHIWVH*PLATMQ
Trigger: CTGCATTGTTGCTAATGGCCAGTGTACCCAGATGTG...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGGGGTTTCACCATGTTaGCCAGGATGGTCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCEGVSPC*PGWSQF
Trigger: AAATTGAGACCATCCTGGCCAACATGGTGAAACCCC...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGCTGTCAACTCTAAAATaGGAACAGCAGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMLSTLK*EQQAPL
Trigger: CAGAGGCGCCTGCTGTTCCCATTTTAGAGTTGACAG...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGACCACTCATCTGGAGGTaGTTTAATGGCACACAAGGA +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRPLIWR*FNGTQG
Trigger: TCCTTGTGTGCCATTAAACCACCTCCAGATGAGTGG...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTCCACTCATCTGGAGGTaGTTTAATGGCACACAAGGA +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPPLIWR*FNGTQG
Trigger: TCCTTGTGTGCCATTAAACCACCTCCAGATGAGTGG...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTGTTCCTCCACTCATCTaGAGGTGGTTTAATGGCACA +
Preference number: 4 (lower is better)
Translates to: LGTFVSSFTHPPPHMNQPVPPLI*RWFNGT
Trigger: TGTGCCATTAAACCACCTCCAGATGAGTGGAGGAAC...AGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAATCATACGTGGTTGTaGAAACTGCACCTGTACTTA +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKNHTWL*KLHLYL
Trigger: TAAGTACAGGTGCAGTTTCCACAACCACGTATGATT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCTTCATTCGTATATGTaGTTCACTAACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSLHSYM*FTNWAP
Trigger: GGGAGCCCAGTTAGTGAACCACATATACGAATGAAG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTCCCAGCAGCAGCGTCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSPSSSV*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGACGCTGCTGCTGGG...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422511.6
3UTR CAA 72 bp TCCACTACTCCCACTGCTGCTGTAAGTTCGATTTCTTaGATTCACAGAAGCTGTCCTCACAGGGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: STTPTAAVSSIS*IHRSCPHRALL
Trigger: CAGCAGAGCCCTGTGAGGACAGCTTCTGTGAATCAAAGAAATCGAACTTACAGCAGCAGTGGGAGTAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR TCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp GTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTCCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: VINCHNLFQVRTWSPRWVQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...GACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR TCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCCCACAAACAGAAACATaGAGGGATGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSPQTET*RDASEF
Trigger: GAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGG...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGATGGTCTCAATTTATTaGCCTCATGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLMVSIY*PHDPPT
Trigger: GGTGGGTGGATCATGAGGTCAATAAATTGAGACCAT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTATGGTCTCAATTTATTaGCCTCATGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPMVSIY*PHDPPT
Trigger: GGTGGGTGGATCATGAGGTCAATAAATTGAGACCAT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGGAAAAAGGAGGGGATaGAAATGTCTCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGGKRRG*KCLTPS
Trigger: ACTGGGTGTGAGACATTTTCATCCCCTCCTTTTTCC...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCCAAAAAGACCAGAAGTaGGCAGATCCCATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGQKDQK*ADPILF
Trigger: GAAAAGAATGGGATCTGCTCACTTCTGGTCTTTTTG...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCTGGAAAATTAAGTACTaGGCACTGAGTGAGAACTCT +
Preference number: 4 (lower is better)
Translates to: GTFVSSFTHPPPHMNQPTWKIKY*ALSENS
Trigger: AGAGTTCTCACTCAGTGCTCAGTACTTAATTTTCCA...GGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGGCCTTTACACAACTCTaGTGGTATTTACCAAAACAT +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKAFTQL*WYLPKH
Trigger: ATGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGC...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACACTAATACCAAGCTCATaGTTGTTGCAGCCTCAACGT +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTLIPSS*LLQPQR
Trigger: ACGTTGAGGCTGCAACAATCATGAGCTTGGTATTAG...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCTGGATTTTACCAGCTTaGCTTTTACTGCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGWILPA*LLLLRC
Trigger: GCATCTGAGCAGTAAAAGTCAAGCTGGTAAAATCCA...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCTGCAGTTTTATAGTTTaGGGGGCACCCATATTTGTG +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASCSFIV*GAPIFV
Trigger: CACAAATATGGGTGCCCCTCAAACTATAAAACTGCA...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGACTGCAGCCTGGTTGTaGTTAGTTCAGGTTACTAGG +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMTAAWL*LVQVTR
Trigger: CCTAGTAACCTGAACTAATCACAACCAGGCTGCAGT...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCAACCACCATCGTGCATaGTTAGCTCCACGAAATAAA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSNHHRA*LAPRNK
Trigger: TTTATTTCGTGGAGCTAATCATGCACGATGGTGGTT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGGGGGTGCTTTTGGTCTaGATCACTTATACAGGTACA +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALGVLLV*ITYTGT
Trigger: TGTACCTGTATAAGTGATTCAGACCAAAAGCACCCC...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGTCTTCTAGGGCTCTCTaGTTATCTGCTGACTGTATG +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALSSRAL*LSADCM
Trigger: CATACAGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACATCTTCTAGGGCTCTCTaGTTATCTGCTGACTGTATG +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTSSRAL*LSADCM
Trigger: CATACAGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp CTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAGTATTAGCACTGGCTCCAGTGTaGGATAGGGGGAGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LTNSSYLRVQSYKIRRVLALAPV*DRGSAA
Trigger: GGCGGCACTCCCCCTATCGCACACTGGAGCCAGTGC...TAATACTCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: LYPSFYFTGVESPGPSDNLTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...ATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR GCA 90 bp ATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATAGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: MKNIQCHRFCRRRNPKGIVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...TATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp AGGAAAAAGCCCAGTCACTCCATTCATAACTCCCTCATACCAACCATCGTCATTGTCCTCACAGGGCTCTaGTGCGAGGGAGCCATATTA +
Preference number: 4 (lower is better)
Translates to: RKKPSHSIHNSLIPTIVIVLTGL*CEGAIL
Trigger: TAATATGGCTCCCTCGCAGCAGAGCCCTGTGAGGAC...AATGACGATGGTTGGTATGAGGGAGTTATGAATGGAGTGACTGGGCTTTTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR GCA 90 bp GTTTCATTTATAGCTACTGGGGCTACCAGGACCCTTGCTGACTGCAGCCTGGTTAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: VSFIATGATRTLADCSLVRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...AACCAGGCTGCAGTCAGCAAGGGTCCTGGTAGCCCCAGTAGCTATAAATGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR GCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LGTFVSSFTHPPPHMNQPHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...AGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCGTCCAAAAGACCAGCTaGATTCCTGCTGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIVQKTS*IPADRH
Trigger: GTGGCGGTCAGCAGGAATGCAGCTGGTCTTTTGGAC...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCTTTCATTATGTGCCTTaGTCCCTGATTGTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIFHYVP*SLIVQS
Trigger: GCTTTGCACAATCAGGGAGCAAGGCACATAATGAAA...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGCTCAGTTCTTACCGTaGCCTTGCAAGGTCTATATG +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGAQFLP*PCKVYM
Trigger: CATATAGACCTTGCAAGGGCACGGTAAGAACTGAGC...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCAGTAGAATCACTCTATaGTTAGAGTTTTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACSRITL*LEFWHQ
Trigger: TTGGTGCCAAAACTCTAAGCATAGAGTGATTCTACT...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGGTATACTCAAGGTCTTaGATAACCCACACTCCACGA +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLVYSRS*ITHTPR
Trigger: TCGTGGAGTGTGGGTTATGCAAGACCTTGAGTATAC...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCAAGGTCAGAAGTCATaGATCCTGTCACCATTCAAA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSQGQKS*ILSPFK
Trigger: TTTGAATGGTGACAGGATGCATGACTTCTGACCTTG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGCCCAGTTATAGCATCTaGTTGATGTGGATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCEPSYSI*LMWMQS
Trigger: TGACTGCATCCACATCAAGCAGATGCTATAACTGGG...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTCTGTGCATGTTGGATaGAATTGTCTCACACCAACA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPSVHVG*NCLTPT
Trigger: TGTTGGTGTGAGACAATTGCATCCAACATGCACAGA...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGGGATTATAGGCACATaGTACCACGCCCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGGIIGT*YHAQLI
Trigger: AATTAGCTGGGCGTGGTAGCATGTGCCTATAATCCC...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGGATACAGCACAGCTaGCACCCTATGGGTCCAATA +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGRIQHS*HPMGPI
Trigger: TATTGGACCCATAGGGTGGCAGCTGTGCTGTATCCT...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTSFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: GTFVSSFTHPPPHMNQPTSFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...GGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp AGTAATGGAAGGAGGGCGTCTATAGGGCAACGAGCCCCCTATTGTTGGGGGAGTTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: SNGRRASIGQRAPYCWGSSFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...ACTCCCCCAACAATAGGGGGCTCGTTGCCCTATAGACGCCCTCCTTCCATTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCCCCATCTTCATGTTCTaGGTACTCACCTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCPIFMF*VLTFTP
Trigger: TGGAGTAAAGGTGAGTACCCAGAACATGAAGATGGG...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTCAGCATTGTACAAATGATGGCAGAAAGATCCATTTGTTCAGACTCAGCTTGCGCTGCTCCGACTACTTaGGTGGCTCCCTCCACTACT +
Preference number: 4 (lower is better)
Translates to: LSIVQMMAERSICSDSACAAPTT*VAPSTT
Trigger: AGTAGTGGAGGGAGCCACCCAAGTAGTCGGAGCAGC...GCAAGCTGAGTCTGAACAAATGGATCTTTCTGCCATCATTTGTACAATGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGACACTGGGAGGAGATaGAGTAGGAACAGCAATAGG +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKDTGRR*SRNSNR
Trigger: CCTATTGCTGTTCCTACTCCATCTCCTCCCAGTGTC...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAGCAAAAAGCTGTTTCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QNTLCLINPLSFLSKKLFRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...AAACAGCTTTTTGCTGAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGAGAGTTACCTGTAGGATaGAGGGAGGAGGAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRELPVG*REEEEQ
Trigger: TTGCTCCTCCTCCTCCCTCCATCCTACAGGTAACTC...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR CCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp CCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTCGTAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLQHKDHYTQPQQLPPLRRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...ACGAAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTAGACTCATCAAAGACTaGTTCTTCCACAGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPRLIKD*FFHRWR
Trigger: CCGCCACCTGTGGAAGAACCAGTCTTTGATGAGTCT...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTTGGAGGAGGAGGAGGTaGGGGAGACTCATCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIWRRRR*GRLIKD
Trigger: GTCTTTGATGAGTCTCCCCCACCTCCTCCTCCTCCA...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTCTCTTCGTAATCTTCTaGAGGAGGAGGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSLFVIF*RRRRWG
Trigger: CCCCCACCTCCTCCTCCTCCAGAAGATTACGAAGAG...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: LYPSFYFTGVESPGPSDNTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...ATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQESTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: VGPLQHKDHYTQPQQLPPFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...AGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGGTTCGGGATGCCTGCGTGGTATTTAAATGTTaGTTCCCTCCTCTTCATACA +
Preference number: 4 (lower is better)
Translates to: LQDPTPQNSTEAGVRDACVVFKC*FPPLHT
Trigger: TGTATGAAGAGGAGGGAACCAACATTTAAATACCAC...GCAGGCATCCCGAACCCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAATGATAGTCATAGTTaGTCTGAACTCCAAGATCCT +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKNDSHS*SELQDP
Trigger: AGGATCTTGGAGTTCAGACCAACTATGACTATCATT...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp ATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: IICILHSTLLEWNPQGLQDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCAAGAAAAGCACGAAGTaGAATGTATACTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTKKSTK*NVYWRQ
Trigger: TTGCCTCCAGTATACATTCCACTTCGTGCTTTTCTT...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACATCCCTCAAGTTCCCCTaGATGGTTTTTACTCAACTC +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTSLKFP*MVFTQL
Trigger: GAGTTGAGTAAAAACCATCCAGGGGAACTTGAGGGA...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACCCACTCATCTGGAGGTaGTTTAATGGCACACAAGGA +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDPLIWR*FNGTQG
Trigger: TCCTTGTGTGCCATTAAACCACCTCCAGATGAGTGG...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CTCAGCATTGTACAAATGATGGCAGAAAGATCCATTTGTTCAGACTCAGCTTGCAGAGCCAGCAGGGGCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LSIVQMMAERSICSDSACRASRG*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGCCCCTGCTGGCTCT...GCAAGCTGAGTCTGAACAAATGGATCTTTCTGCCATCATTTGTACAATGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261018.12
ENST00000295851.10
ENST00000424558.5
CDS-3UTR CCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACCCAACTAGGGAAATTTaGCCATTAAATACATTGGTG +
Preference number: 4 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYPTREI*PLNTLV
Trigger: CACCAATGTATTTAATGGCCAAATTTCCCTAGTTGG...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAGACTTTGAGTGTTTGTaGATCGGCACCATTAAGAAT +
Preference number: 4 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGDFECL*IGTIKN
Trigger: ATTCTTAATGGTGCCGATCCACAAACACTCAAAGTC...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCACATTATATTTAACTaGGATTGCTCCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSHIIFN*DCSLPQ
Trigger: CTGAGGGAGGGAGCAATCCCAGTTAAATATAATGTG...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGCTATGCTTAGAGTTTTaGCACCAATGCTGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCELCLEF*HQCCRA
Trigger: TGCCCTACAGCATTGGTGCCAAAACTCTAAGCATAG...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp ACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTATGCGTGTGCAGTTTaGTATAACGTGGAGTCAGTG +
Preference number: 4 (lower is better)
Translates to: TGVESPGPSDNLGRPDYSYACAV*YNVESV
Trigger: CACTGACTCCACGTTATACCAAACTGCACACGCATA...GGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GGGCTAGGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGTCCTGTGCCCCAATATaGTGCATTATGAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: GLGYPLGHEVNPLAQAMKSCAPI*CIMKNK
Trigger: TTTGTTTTTCATAATGCACCATATTGGGGCACAGGA...CTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCCTAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGGTCCCAGTATGTCTTTaGGTCACCAGTTACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQVPVCL*VTSYLL
Trigger: AAGAAGGTAACTGGTGACCCAAAGACATACTGGGAC...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCGTGTTCAGAGCCTCCTaGTATGATGTTATTCAGGTA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSVFRAS*YDVIQV
Trigger: TACCTGAATAACATCATACCAGGAGGCTCTGAACAC...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GTTCTCCAACAAGGGTGTGTGTCAGCAAAAGCCCCTGTTCTGAGTGGGCGTGGAAAAACTCAATCTTTCTaGAGTCAACCTTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: VLQQGCVSAKAPVLSGRGKTQSF*SQPSWS
Trigger: ACTCCAGGAAGGTTGACTCCAGAAAGATTGAGTTTT...TCCACGCCCACTCAGAACAGGGGCTTTTGCTGACACACACCCTTGTTGGAGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTGAACTGAGCATCTGCTTGATGTaGATGCAGTCATGGACTGAA +
Preference number: 4 (lower is better)
Translates to: PTHQRHILQRAVNYLGELSICLM*MQSWTE
Trigger: TTCAGTCCATGACTGCATCCACATCAAGCAGATGCT...CAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTTTTCAGCTACCCAGATaGGTTGGTTGTTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LGTFVSSFTHPPPHMNQPFQLPR*VGCWQM
Trigger: CATTTGCCAACAACCAACCCATCTGGGTAGCTGAAA...AGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CAGCACCAAGACTGTGGCACCTGTTGTGACTCAAGCTGCACCACCCACACCTACTTTAAGCAGTTTGGATaGCAAAACACCATCTATTGC +
Preference number: 4 (lower is better)
Translates to: QHQDCGTCCDSSCTTHTYFKQFG*QNTIYC
Trigger: GCAATAGATGGTGTTTTGCCATCCAAACTGCTTAAA...GTAGGTGTGGGTGGTGCAGCTTGAGTCACAACAGGTGCCACAGTCTTGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
3UTR CAA 72 bp CCTGCATTGCTGGACTTCTGTGCATGTTGGATGCAATaGTCTCACACCAACACGAGTGTGTGTGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: PALLDFCACWMQ*SHTNTSVCVKL
Trigger: AAGCTTGACACACACACTCGTGTTGGTGTGAGACAATTGCATCCAACATGCACAGAAGTCCAGCAATGCAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTATGAAGGGATGCAAGTaGGTTCAGCATTCACTCGTT +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTMKGCK*VQHSLV
Trigger: AACGAGTGAATGCTGAACTCACTTGCATCCCTTCAT...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp TCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGAGGCCCAACATCACAGTaGCCACCCACAAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: SFVSFILLYWSGIPRAFRGPTSQ*PPTKRQ
Trigger: TTGTCTCTTTGTGGGTGGTCACTGTGATGTTGGGCC...TCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTATGGTCTCAATTTATTaGCCTCATGATCCACCCACC +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSMVSIY*PHDPPT
Trigger: GGTGGGTGGATCATGAGGTCAATAAATTGAGACCAT...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp AGTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTGGAAAAAGGAGGGGATaGAAATGTCTCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: SHKLPQPFPSKNVEPTVGGKRRG*KCLTPS
Trigger: ACTGGGTGTGAGACATTTTCATCCCCTCCTTTTTCC...ACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR TCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTTAAGTACTGAGCACTaGGTGAGAACTCTGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCLSTEH*VRTLLL
Trigger: TAACAGCAGAGTTCTCACTCAGTGCTCAGTACTTAA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGTGCCAAGCGCTACTGTaGTTCATGAATGAATTTCTC +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALCQALL*FMNEFL
Trigger: GAGAAATTCATTCATGAATCACAGTAGCGCTTGGCA...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGACTGCAGAAATCAGTTaGCATTGTCCCACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRTAEIS*HCPTRK
Trigger: TTTCCTTGTGGGACAATGTCAACTGATTTCTGCAGT...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCATTGTCCATCTTTATaGTCACCACCAACTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALHCPSL*SPPTSA
Trigger: TGCAGAAGTTGGTGGTGATCATAAAGATGGACAATG...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCATAAACTACCAGATGTaGTCATTTCAGCTACCCAGA +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSINYQM*SFQLPR
Trigger: TCTGGGTAGCTGAAATGATCACATCTGGTAGTTTAT...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTGGTTTCTTCTAGGGCTCTCTGCTTATCTGCTGACATGTTGCTCAGGCTAGTCTCTCTGCTTATCTGCTaGCATGTTGCTCAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: LVSSRALCLSADMLLRLVSLLIC*HVAQAS
Trigger: ACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGA...GACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGAAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425253.1
CDS-3UTR GCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTCTTCTAGGGCTCTCTaGTTATCTGCTGACTGTATG +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDSSRAL*LSADCM
Trigger: CATACAGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
CDS-3UTR GCA 90 bp AACAAAGTAAACATGGCGTTTTATAGTCCTCTAAAATCTAGGTGCTCCCACCCACTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: NKVNMAFYSPLKSRCSHPLTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...TGGGTGGGAGCACCTAGATTTTAGAGGACTATAAAACGCCATGTTTACTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp GTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTCAGGCAGGCCTATTCATaGTGTAGAACTGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: VINCHNLFQVRTWSPRWVRQAYS*CRTVQD
Trigger: ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCT...GACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR GCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGATGAAGAACATCCAATaGCACAGATTCTGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMMKNIQ*HRFCRR
Trigger: CCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGTCAGGGCCATTACACTaGAGGAAAACAAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCESGPLH*RKTRNK
Trigger: CTTATTCCTTGTTTTCCTGCAGTGTAATGGCCCTGA...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAGTCCAAAAGACCAGCTaGATTCCTGCTGACCGCCAC +
Preference number: 4 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKVQKTS*IPADRH
Trigger: GTGGCGGTCAGCAGGAATGCAGCTGGTCTTTTGGAC...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATGCTGTGCTGTGCTCCTaGCAGTGTTGGAGTAATATA +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYAVLCS*QCWSNI
Trigger: TATATTACTCCAACACTGGCAGGAGCACAGCACAGC...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCCCAATAAGGCTGCTGTaGTGTGCTCCTGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIPIRLL*CAPASV
Trigger: AACACTGGCAGGAGCACAGCACAGCAGCCTTATTGG...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp ATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATATTACTGGCAACAGACTaGTCCCTCAAGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: MKNIQCHRFCRRRNPKGILLATD*SLKFPW
Trigger: CCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAA...TATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGAGTTTTGGCACCAATaGTGTAGGGCAGCAGAATCT +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKEFWHQ*CRAAES
Trigger: AGATTCTGCTGCCCTACAGCATTGGTGCCAAAACTC...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CGGCCCTACACTTCACTTGTGCCCCCTTTATCCCCGCAACCTAAGATAGTCACCTTAGAGGTAGTGACTTaGTTAATTAGTGACACTCCT +
Preference number: 4 (lower is better)
Translates to: RPYTSLVPPLSPQPKIVTLEVVT*LISDTP
Trigger: AGGAGTGTCACTAATTAAGCAAGTCACTACCTCTAA...GGTGACTATCTTAGGTTGCGGGGATAAAGGGGGCACAAGTGAAGTGTAGGGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCTTAGAGTTGATTTCATaGAAGACTGGGTGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTALELIS*KTGCQD
Trigger: ATCCTGACACCCAGTCTTGCATGAAATCAACTCTAA...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TCTTCTAGGGCTCTCTGCTTATCTGCTGACATGTTGCTCAGGCTAGTCTTCCCATCTTCTAGGGCTCTCTaGTTATCTGCTGACATGTTG +
Preference number: 4 (lower is better)
Translates to: SSRALCLSADMLLRLVFPSSRAL*LSADML
Trigger: CAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...TGGGAAGACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425253.1
CDS-3UTR CCA 90 bp ATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGTCCATCCTTCGTAGCTaGGATGCCTGGATATCCAGC +
Preference number: 4 (lower is better)
Translates to: IICILHSTLLEWNPQGLQSILRS*DAWISS
Trigger: GCTGGATATCCAGGCATCCCAGCTACGAAGGATGGA...CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACATCTAATATAACGAACTaGTCGTTCAAGGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGPSDNLGRPDYSCEASTSNITN*SFKVGW
Trigger: CCAGCCAACCTTGAACGACCAGTTCGTTATATTAGA...TGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTCCCCATCTTCATGTTCTaGGTACTCACCTTTACTCCA +
Preference number: 4 (lower is better)
Translates to: VINCHNLFQVRTWSPRWVPIFMF*VLTFTP
Trigger: TGGAGTAAAGGTGAGTACCCAGAACATGAAGATGGG...GACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR CCA 90 bp CAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAGCAAAAAGCTGTTTAGGGGGCTTCTGAGTTaGAGGTGTTGTACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: QNTLCLINPLSFLSKKLFRGLLS*RCCTRQ
Trigger: CTGCCGCGTACAACACCTCCAACTCAGAAGCCCCCT...AAACAGCTTTTTGCTGAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp ATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IICILHSTLLEWNPQGLQIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALSHITG*ARYVII
Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPSHITG*ARYVII
Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTGGGGGAGTATGGCGAGAGGCAGGCCTATTCATGCTGTAGAACTGTACAGGATAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT +
Preference number: 4 (lower is better)
Translates to: LGEYGERQAYSCCRTVQDSHITG*ARYVII
Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...ATCCTGTACAGTTCTACAGCATGAATAGGCCTGCCTCTCGCCATACTCCCCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441061.5
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLSHITG*ARYVII
Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000441061.5
ENST00000454023.1
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCTCCGACTACTTGGGTaGCTCCCTCCACTACTCCCA +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLLRLLG*LPPLLP
Trigger: TGGGAGTAGTGGAGGGAGCCACCCAAGTAGTCGGAG...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTGTACAGGATGACCTaGAAAGACACTGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRLYRMT*KDTGRR
Trigger: TCTCCTCCCAGTGTCTTTCCAGGTCATCCTGTACAG...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000441061.5
CDS-3UTR CCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGAATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: SFVSFILLYWSGIPRAFRIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...TCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: LYPSFYFTGVESPGPSDNWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...ATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCAGATTTTTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: QEEKSQGYTVFLRKIPDFWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...AAAATCTGGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAGCAAAAAGCTGTTTACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: QNTLCLINPLSFLSKKLFTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...AAACAGCTTTTTGCTGAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTACGTGGAGCCCACGGTaGGTCCTCTTCAGCATAAGG +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLTWSPR*VLFSIR
Trigger: CCTTATGCTGAAGAGGACCCACCGTGGGCTCCACGT...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQEFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCTTCCTCCTCTTTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPLQHKDHYTQPQQLPPLFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...AAGAGGAGGAAGCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTTTCATTCTACTTTACTaGAGTGGAATCCCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPFILLY*SGIPRA
Trigger: GGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAA...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACACCACACTTCACATCTaGGTACACTGGCCATTAGCA +
Preference number: 4 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDTTLHI*VHWPLA
Trigger: TGCTAATGGCCAGTGTACCCAGATGTGAAGTGTGGT...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCAAGAAAAGCACGAAGTaGAATGTATACTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIKKSTK*NVYWRQ
Trigger: TTGCCTCCAGTATACATTCCACTTCGTGCTTTTCTT...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGCCATGTTGGCCAGGATaGTCTCAATTTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: FRTLGTFVSSFTHPPPHMPCWPG*SQFIDL
Trigger: GAGGTCAATAAATTGAGACCATCCTGGCCAACATGG...CATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp AGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCCCCATCTTCATGTTCTaGGTACTCACCTTAAATCTA +
Preference number: 4 (lower is better)
Translates to: SPRWVLFSIRITILNHSSPIFMF*VLTLNL
Trigger: TAGATTTAAGGTGAGTACCCAGAACATGAAGATGGG...GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR CCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTTACCCACGTGGGGTCTaGCTGCTTTCTACCAAAGAC +
Preference number: 4 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSYPRGV*LLSTKD
Trigger: GTCTTTGGTAGAAAGCAGCCAGACCCCACGTGGGTA...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGTTCTGTATTTTGGGTaGAAGAGGCATAGAAGGGGA +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSVLYFG*KRHRRG
Trigger: TCCCCTTCTATGCCTCTTCCACCCAAAATACAGAAC...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAATCCAGCCTGGATTCCTaGCTGACCTCAACAGGACAC +
Preference number: 4 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKSSLDS*LTSTGH
Trigger: GTGTCCTGTTGAGGTCAGCCAGGAATCCAGGCTGGA...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp ACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGCCTACCACAGAACCAGTGGCACCCTaGGCTCAACTATTTTATTTT +
Preference number: 4 (lower is better)
Translates to: TFVSSFTHPPPHMNQPTTEPVAP*AQLFYF
Trigger: AAAATAAAATAGTTGAGCCCAGGGTGCCACTGGTTC...TGTGGTAGGCTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTGTACAGGATGACCTaGATATCCAGCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRLYRMT*ISSICR
Trigger: CCTGCAGATGCTGGATATCCAGGTCATCCTGTACAG...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416001.5
CDS-3UTR TCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGTCTCTGCTTATCTGCTaGCTGTATGTAGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGSLLIC*LYVVVL
Trigger: GAGAACAACTACATACAGTCAGCAGATAAGCAGAGA...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGATGGAGGTGGTGTATCTaGAATATTTTCTTGGACTCT +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRWRWCI*NIFLDS
Trigger: AGAGTCCAAGAAAATATTTCAGATACACCACCTCCA...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR TCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGGGTGCACTCAAGTGCTaGGAGAATGCAGAATTTACA +
Preference number: 4 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRGALKC*ENAEFT
Trigger: TGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACC...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TCGGGATGCCTGCTAAGAGCATTTCCACAGTTCAAGTCTCTTCAGAACCTTAGGATGAAGGGATGCAAGTaGGTTCAGCATTCACTCGTT +
Preference number: 4 (lower is better)
Translates to: SGCLLRAFPQFKSLQNLRMKGCK*VQHSLV
Trigger: AACGAGTGAATGCTGAACTCACTTGCATCCCTTCAT...CCTAAGGTTCTGAAGAGACTTGAACTGTGGAAATGCTCTTAGCAGGCATCCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATATGAAGGGATGCAAGTaGGTTCAGCATTCACTCGTT +
Preference number: 4 (lower is better)
Translates to: FTGVESPGPSDNLGRPDYMKGCK*VQHSLV
Trigger: AACGAGTGAATGCTGAACTCACTTGCATCCCTTCAT...ATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGCCACAAACAGAAACATaGAGGGATGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKPQTET*RDASEF
Trigger: GAACTCACTTGCATCCCTTCATGTTTCTGTTTGTGG...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp CTCAGCATTGTACAAATGATGGCAGAAAGATCCATTTGTTCAGACTCAGCTTGCACCCACCTCCACATATaGACCAGCCTACCACACTTC +
Preference number: 4 (lower is better)
Translates to: LSIVQMMAERSICSDSACTHLHI*TSLPHF
Trigger: GAAGTGTGGTAGGCTGGTTCATATGTGGAGGTGGGT...GCAAGCTGAGTCTGAACAAATGGATCTTTCTGCCATCATTTGTACAATGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR TCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAGGCCCAACATCACAGTaGCCACCCACAAAGAGACAA +
Preference number: 4 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKGPTSQ*PPTKRQ
Trigger: TTGTCTCTTTGTGGGTGGTCACTGTGATGTTGGGCC...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp AGTCATAAATTGCCACAACCTTTTCCAAGTAAGAACGTGGAGCCCACGGTGGGTGCATCCGACACCATCTaGATTTTCTCACACACTACT +
Preference number: 4 (lower is better)
Translates to: SHKLPQPFPSKNVEPTVGASDTI*IFSHTT
Trigger: AGTAGTGTGTGAGAAAATTCAGATGGTGTCGGATGC...ACCCACCGTGGGCTCCACGTTCTTACTTGGAAAAGGTTGTGGCAATTTATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR TCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTTTCCAAATGGGAGGCTaGATCTCTCAGATGTCGATT +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPFQMGG*ISQMSI
Trigger: AATCGACATCTGAGAGATTCAGCCTCCCATTTGGAA...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGCTTGTCAGTCACCTGTaGATTCCTCCATCAAACCTT +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQELVSHL*IPPSNL
Trigger: AAGGTTTGATGGAGGAATTCACAGGTGACTGACAAG...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCGAAATAAGATGGGCTTaGAAAGTGAGAAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNIEIRWA*KVRKAE
Trigger: TTCAGCTTTTCTCACTTTTCAAGCCCATCTTATTTC...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCTGAGGATGTTTTTCTaGGGATGTTTTTGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: WNPQGLQIIWEDLTIPVRLRMFF*GCFCSA
Trigger: AGCAGAACAAAAACATCCTCAGAAAAACATCCTCAG...CCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTTCATTGCTATACATaGAGGGGCACTTTAAATCAG +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALLHCYT*RGTLNQ
Trigger: CTGATTTAAAGTGCCCCTTCATGTATAGCAATGAAG...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp GGGTACCCACTGGGCCATGAGGTTAACCCCTTAGCACAGGCAATGAAGAACATCACTTCCCCTTGGAAATaGGTATTTTACAAATTGGCT +
Preference number: 4 (lower is better)
Translates to: GYPLGHEVNPLAQAMKNITSPWK*VFYKLA
Trigger: AGCCAATTTGTAAAATACTCATTTCCAAGGGGAAGT...GATGTTCTTCATTGCCTGTGCTAAGGGGTTAACCTCATGGCCCAGTGGGTACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATCCTAGTGCTGTCCACTaGGGACTAGAAGCAGTGATA +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDPSAVH*GLEAVI
Trigger: TATCACTGCTTCTAGTCCTCAGTGGACAGCACTAGG...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGTCTTCTAGGGCTCTCTaGTTATCTGCTGACTGTATG +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQESSRAL*LSADCM
Trigger: CATACAGTCAGCAGATAAGCAGAGAGCCCTAGAAGA...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR GCA 90 bp ATAACGTCCAGAGAGCACATTAGCAAACCTTGTACTCCCAGTGACTGTCAGGAGCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: ITSREHISKPCTPSDCQEHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...CTCCTGACAGTCACTGGGAGTACAAGGTTTGCTAATGTGCTCTCTGGACGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp AGCCCACGGTGGGTCCTCTTCAGCATAAGGATCACTATACTCAACCACAGCAGCATGATTAAAGTTATCTaGCCTACAGACTCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SPRWVLFSIRITILNHSSMIKVI*PTDSTE
Trigger: TTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCAT...GCTGCTGTGGTTGAGTATAGTGATCCTTATGCTGAAGAGGACCCACCGTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261016.11
CDS-3UTR GCA 90 bp TCCCTCCTCTTCATACAAGTGGAAGAAAAGAAGGGGCTAGGGTACCCACTGGGCTGGAATATTAACTTCTaGATCCGACACCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SLLFIQVEEKKGLGYPLGWNINF*IRHHLN
Trigger: ATTCAGATGGTGTCGGATGCAGAAGTTAATATTCCA...GCCCAGTGGGTACCCTAGCCCCTTCTTTTCTTCCACTTGTATGAAGAGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CTGCTTTTCCCCTTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTTCAGGGCCATTACACTaGAGGAAAACAAGGAATAAG +
Preference number: 4 (lower is better)
Translates to: LLFPFHLAQGSYLAKLYSSGPLH*RKTRNK
Trigger: CTTATTCCTTGTTTTCCTGCAGTGTAATGGCCCTGA...AGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAAGGGGAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCAGATTTTTTACTGGCAACAGACTaGTCCCTCAAGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QEEKSQGYTVFLRKIPDFLLATD*SLKFPW
Trigger: CCAGGGGAACTTGAGGGAGCAGTCTGTTGCCAGTAA...AAAATCTGGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp TCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTGCACCTGTACTTATaGCTTCAGAAGCAGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SFYFTGVESPGPSDNLGRLHLYL*LQKQQC
Trigger: ACACTGCTGCTTCTGAAGGCATAAGTACAGGTGCAG...TCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTCAGCTTGACTTTTACTaGTCAGATGCTTTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTQLDFY*SDAFFP
Trigger: GGGAAAGAAAGCATCTGAGCAGTAAAAGTCAAGCTG...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp ATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATAAAACAGAGCTTCCTCTaGCCCCCATTGAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: MKNIQCHRFCRRRNPKGIKQSFL*PPLRFQ
Trigger: CTGGAATCTCAATGGGGGGCAGAGGAAGCTCTGTTT...TATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GTATTTATAAGTGTCTGTCCATGTGTAGCCTATTCGTGCATGTTGTGTATTATAGGCCCAGCTAAAGCCTaGACCGTGTGCCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: VFISVCPCVAYSCMLCIIGPAKA*TVCPIP
Trigger: AGGGATGGGGCACACGGTGCAGGCTTTAGCTGGGCC...TATAATACACAACATGCACGAATAGGCTACACATGGACAGACACTTATAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp AGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGAGTATTACCCTTTCTAACTCCCCAGCCAGTCTaGACCTTCTGCAGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSYLRVQSYKIRRVLPFLTPQPV*TFCRLS
Trigger: GCTGAGCCTGCAGAAGGTGCAGACTGGCTGGGGAGT...TAGAAAGGGTAATACTCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTAGTCACCCCCTACACTaGTTCACAGCCTTCACCACC +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLSHPLH*FTAFTT
Trigger: GGTGGTGAAGGCTGTGAAGCAGTGTAGGGGGTGACT...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTAAGAGTCCAATCATACAAAATCAGGAGAGTATTACCCTTTCTACAGCTAAGCAGGCGAGAGCCACCGTaGCCAGCCTCTCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRVQSYKIRRVLPFLQLSRREPP*PASLSL
Trigger: AAGAGAGAGAGAGGCTGGGCACGGTGGCTCTCGCCT...GCTTAGCTGTAGAAAGGGTAATACTCTCCTGATTTTGTATGATTGGACTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTTTGGCCAAGGATGCTaGTTAAATAGATCATGGTTT +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSFGQGC*LNRSWF
Trigger: AAACCATGATCTATTTAAGCAGCATCCTTGGCCAAA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTGGTTTCTTCTAGGGCTCTCTGCTTATCTGCTGACATGTTGCTCAGGCTAGTCAAGCACCAGAGGATATaGACTGTCAAAACGGAAAGC +
Preference number: 4 (lower is better)
Translates to: LVSSRALCLSADMLLRLVKHQRI*TVKTES
Trigger: GCTTTCCGTTTTGACAGTGCATATCCTCTGGTGCTT...GACTAGCCTGAGCAACATGTCAGCAGATAAGCAGAGAGCCCTAGAAGAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425253.1
CDS-3UTR CCA 90 bp TTTCACCTAGCACAGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTTCTGCAGGACATTGTTaGCCAAGGTGTTTATCAGAT +
Preference number: 4 (lower is better)
Translates to: FHLAQGSYLAKLYSGQVTSAGHC*PRCLSD
Trigger: ATCTGATAAACACCTTGGCCAACAATGTCCTGCAGA...AGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCTGTGCTAGGTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCESFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTCGTTCAAGGTTGGCTaGAGCAATAATCTTATGTGT +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCSFKVG*SNNLMC
Trigger: ACACATAAGATTATTGCTCCAGCCAACCTTGAACGA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTCTAATATAACGAACTaGTCGTTCAAGGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YFTGVESPGPSDNLGRPDSNITN*SFKVGW
Trigger: CCAGCCAACCTTGAACGACCAGTTCGTTATATTAGA...GTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATCCATTTGTTCAGACTCAGCTTGCTTTGTTTTTAATACTGGGGAATAAACCACACTGGAGGACGCACTaGCTCCAGTGTGCGATAGGG +
Preference number: 4 (lower is better)
Translates to: DPFVQTQLALFLILGNKPHWRTH*LQCAIG
Trigger: CCCTATCGCACACTGGAGCCAGTGCGTCCTCCAGTG...TGGTTTATTCCCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACAAATGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp TTGGTGCACTCAAGTGCTGAGAGAATGCAGAATTTACAGTGTCACAGAGGAAAAATCATTTGGTACCACTaGAGGACGCACTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVHSSAERMQNLQCHRGKIIWYH*RTHWLQ
Trigger: CTGGAGCCAGTGCGTCCTCCAGTGGTACCAAATGAT...TTTTCCTCTGTGACACTGTAAATTCTGCATTCTCTCAGCACTTGAGTGCACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CATAGTTGGTCTGAACTCCAAGATCCTACTCCTCAAAACAGCACCGAAGCAGGGAGCCATATTACGGGTTaGGCTAGGTACGTAATCATT +
Preference number: 4 (lower is better)
Translates to: HSWSELQDPTPQNSTEAGSHITG*ARYVII
Trigger: AATGATTACGTACCTAGCCCAACCCGTAATATGGCT...CCCTGCTTCGGTGCTGTTTTGAGGAGTAGGATCTTGGAGTTCAGACCAACTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATATTGTTGGGGGAGTATaGCGAGAGGCAGGCCTATTC +
Preference number: 4 (lower is better)
Translates to: LYPSFYFTGVESPGPSDNIVGGV*REAGLF
Trigger: GAATAGGCCTGCCTCTCGCCATACTCCCCCAACAAT...ATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GATCCATTTGTTCAGACTCAGCTTGCTTTGTTTTTAATACTGGGGAATAAACCACGAGCCCCCTATTGTTaGGGGAGTATGGCGAGAGGC +
Preference number: 4 (lower is better)
Translates to: DPFVQTQLALFLILGNKPRAPYC*GSMARG
Trigger: GCCTCTCGCCATACTCCCCCAACAATAGGGGGCTCG...TGGTTTATTCCCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACAAATGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGAAGGAGCAAGAGATACTaGATTCTGGCTATAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRRSKRY*ILAIKR
Trigger: CCTTTTTATAGCCAGAATCCAGTATCTCTTGCTCCT...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR CCA 90 bp GATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAGCTATTTTCTTGGACTCTaGCCACAAATCCCATTAAAG +
Preference number: 4 (lower is better)
Translates to: DNLGRPDYSCEASTALLSYFLGL*PQIPLK
Trigger: CTTTAATGGGATTTGTGGCCAGAGTCCAAGAAAATA...GCTCAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR CCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGATCTGAAATATTTTCTTaGACTCTGGCCACAAATCCC +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRSEIFS*TLATNP
Trigger: GGGATTTGTGGCCAGAGTCCAAGAAAATATTTCAGA...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261017.9
ENST00000261018.12
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CTGGATTCTGGCTATAAAAAGGTCCTCCATTCATCTGATTCTGAAGGCTTGTTTTGGTTCTTCCACAGGTaGCGGTGGAGGTGGTGTATC +
Preference number: 4 (lower is better)
Translates to: LDSGYKKVLHSSDSEGLFWFFHR*RWRWCI
Trigger: GATACACCACCTCCACCGCCACCTGTGGAAGAACCA...AAACAAGCCTTCAGAATCAGATGAATGGAGGACCTTTTTATAGCCAGAATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTTTCCAAGTAAGAACGTaGAGCCCACGGTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLFQVRT*SPRWVL
Trigger: GAGGACCCACCGTGGGCTCCACGTTCTTACTTGGAA...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGGCCTTCAGATAATCTaGGAAGACCTGACTATTCCT +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPGLQII*EDLTIP
Trigger: AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp AGGAAAAAGCCCAGTCACTCCATTCATAACTCCCTCATACCAACCATCGTCATTTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RKKPSHSIHNSLIPTIVISTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...AATGACGATGGTTGGTATGAGGGAGTTATGAATGGAGTGACTGGGCTTTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261016.11
ENST00000416001.5
ENST00000441061.5
CDS-3UTR CCA 90 bp CATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATTCTACTTTACTGGAGTaGAATCCCCAGGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: HLYPSFYFTGVESPGPSDSTLLE*NPQGLQ
Trigger: CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGA...ATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR CCA 90 bp GGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCGTGGTATTTAAATGTTaGTTCCCTCCTCTTCATACA +
Preference number: 4 (lower is better)
Translates to: GLQIIWEDLTIPVRQAQPVVFKC*FPPLHT
Trigger: TGTATGAAGAGGAGGGAACCAACATTTAAATACCAC...GGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCGTGGTATTTAAATGTTaGTTCCCTCCTCTTCATACA +
Preference number: 4 (lower is better)
Translates to: GPSDNLGRPDYSCEASTAVVFKC*FPPLHT
Trigger: TGTATGAAGAGGAGGGAACCAACATTTAAATACCAC...GGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCCAGCATTCACTCGTTTaGTGCACTCAAGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPQHSLV*CTQVLR
Trigger: TCTCAGCACTTGAGTGCACCAAACGAGTGAATGCTG...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR CCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTTAAAATCAAACGGGTaGCAATCGTTCACCACCCTC +
Preference number: 4 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDLKSNG*QSFTTL
Trigger: GAGGGTGGTGAACGATTGCCACCCGTTTGATTTTAA...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCCACATCTGGGTACACTaGCCATTAGCAACAATGCAG +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPHIWVH*PLATMQ
Trigger: CTGCATTGTTGCTAATGGCCAGTGTACCCAGATGTG...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR CCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTGACCTGAACAGGAGCTaGCCCAACATCACAGTGACC +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLDLNRS*PNITVT
Trigger: GGTCACTGTGATGTTGGGCCAGCTCCTGTTCAGGTC...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTGAAGAAAAGCACGAAGTaGAATGTATACTGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SDNLGRPDYSCEASTALLKKSTK*NVYWRQ
Trigger: TTGCCTCCAGTATACATTCCACTTCGTGCTTTTCTT...CAGCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCAAGTATAGTCTAGTTTaGGTCCATAATGGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SPGPSDNLGRPDYSCEASKYSLV*VHNGAE
Trigger: TTCAGCTCCATTATGGACCCAAACTAGACTATACTT...GCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGCCATGTTGGCCAGGATaGTCTCAATTTATTGACCTC +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKPCWPG*SQFIDL
Trigger: GAGGTCAATAAATTGAGACCATCCTGGCCAACATGG...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGACTGTCAACTCTAAAATaGGAACAGCAGGCGCCTCTG +
Preference number: 4 (lower is better)
Translates to: SFVSFILLYWSGIPRAFRLSTLK*EQQAPL
Trigger: CAGAGGCGCCTGCTGTTCCCATTTTAGAGTTGACAG...TCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTTCCCTCAAGTTCCCCTaGATGGTTTTTACTCAACTC +
Preference number: 4 (lower is better)
Translates to: FYFTGVESPGPSDNLGRPSLKFP*MVFTQL
Trigger: GAGTTGAGTAAAAACCATCCAGGGGAACTTGAGGGA...AGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR CCA 90 bp TTTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTATTAGCCAGGAGTGGTaGCAGTCGCCTGTAGTCCCA +
Preference number: 4 (lower is better)
Translates to: FYHLYPSFYFTGVESPGPISQEW*QSPVVP
Trigger: TGGGACTACAGGCGACTGCCACCACTCCTGGCTAAT...AGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AAACATGAAGGGATGCAAGTGAGTTCAGCATTCACTCGTTTGGTGCACTCAAGTGGTAATGGTGTGGATTaGCCTGCTTTGACTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KHEGMQVSSAFTRLVHSSGNGVD*PALTLS
Trigger: GCTGAGAGTCAAAGCAGGCCAATCCACACCATTACC...ACTTGAGTGCACCAAACGAGTGAATGCTGAACTCACTTGCATCCCTTCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCATGAGAGAACAGAACTaGCCCCTGTACAGGTGTCAT +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPMREQN*PLYRCH
Trigger: ATGACACCTGTACAGGGGCCAGTTCTGTTCTCTCAT...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp ATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATAAGTTGCCTGAGTAGTTaGGACTACAGGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: MKNIQCHRFCRRRNPKGISCLSS*DYRCTP
Trigger: TGGTGTGCACCTGTAGTCCCAACTACTCAGGCAACT...TATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp AGTCTCTTCAGAACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCAATCGGGGATCTTATTTaGCCTTATTTCAGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SLFRTLGTFVSSFTHPPPIGDLI*PYFSLL
Trigger: AAGGAGACTGAAATAAGGCCAAATAAGATCCCCGAT...TGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGTTCTGAAGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGGGTAACTTCACAGTaGAGAAACCTGACAAACACT +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKGVTSQ*RNLTNT
Trigger: AGTGTTTGTCAGGTTTCTCCACTGTGAAGTTACCCC...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR CCA 90 bp CCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGACTAAGTCCTCAAGTGTaGACTGTGCTTAGTGACTTG +
Preference number: 4 (lower is better)
Translates to: PSFYFTGVESPGPSDNLGLSPQV*TVLSDL
Trigger: CAAGTCACTAAGCACAGTCCACACTTGAGGACTTAG...TCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACTCTCTGCTTATCTGCTaGCTGTATGTAGTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: HSTLLEWNPQGLQIIWEDSLLIC*LYVVVL
Trigger: GAGAACAACTACATACAGTCAGCAGATAAGCAGAGA...GTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
CDS-3UTR TCA 90 bp GATCCATTTGTTCAGACTCAGCTTGCTTTGTTTTTAATACTGGGGAATAAACCAGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: DPFVQTQLALFLILGNKPGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...TGGTTTATTCCCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACAAATGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR TCA 90 bp AAGATTGCACTTAGTACACGCCTTTACACAACTCTGATGGTATTTACCAAAACAGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: KIALSTRLYTTLMVFTKTGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...TGTTTTGGTAAATACCATCAGAGTTGTGTAAAGGCGTGTACTAAGTGCAATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp TATCTGAAACTGGATTCTGGCTATAAAAAGGTCCTCCATTCATCTGATTCTGAAGGACTAGGGGGCTTCTaGGTTGGAGGTGTTGTACGC +
Preference number: 4 (lower is better)
Translates to: YLKLDSGYKKVLHSSDSEGLGGF*VGGVVR
Trigger: GCGTACAACACCTCCAACTCAGAAGCCCCCTAGTCC...TTCAGAATCAGATGAATGGAGGACCTTTTTATAGCCAGAATCCAGTTTCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261016.11
ENST00000441061.5
CDS-3UTR TCA 90 bp ATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGCAAGCACAGCCCTGCTaGGCTTTACTCAGAATAATG +
Preference number: 4 (lower is better)
Translates to: IICILHSTLLEWNPQGLQQAQPC*ALLRIM
Trigger: CATTATTCTGAGTAAAGCTCAGCAGGGCTGTGCTTG...CTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000416001.5
ENST00000422511.6
ENST00000424558.5
ENST00000430418.5
ENST00000441061.5
CDS-3UTR TCA 90 bp CTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGCTCAAGTTCCACTTTCTaGACTTGTTCAAAACCTCAT +
Preference number: 4 (lower is better)
Translates to: LQIIWEDLTIPVRQAQPCSSSTF*TCSKPH
Trigger: ATGAGGTTTTGAACAAGTTCAGAAAGTGGAACTTGA...GCAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp CAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCAGATTTTAATTTATTGACCTCATaGTCCACCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QEEKSQGYTVFLRKIPDFNLLTS*STHLGL
Trigger: GAGGCCGAGGTGGGTGGATCATGAGGTCAATAAATT...AAAATCTGGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp TGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTCAGATAATCGGAAAAAGGAGGGGATaGAAATGTCTCACACCCAGT +
Preference number: 4 (lower is better)
Translates to: CILHSTLLEWNPQGLQIIGKRRG*KCLTPS
Trigger: ACTGGGTGTGAGACATTTTCATCCCCTCCTTTTTCC...GATTATCTGAAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR TCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGATGTTTTCTTGTCACTaGAAACAAACAACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCEMFSCH*KQTTLS
Trigger: ACTCAGCGTTGTTTGTTTTCAGTGACAAGAAAACAT...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCCCTTTCGTTCACCATCTGTCAATCATACGTGGTTGTGGAAACTGCACCTGTATTTTCACCCATGATTTaGGCCCTAAAACAACAGCCT +
Preference number: 4 (lower is better)
Translates to: PLSFTICQSYVVVETAPVFSPMI*ALKQQP
Trigger: AGGCTGTTGTTTTAGGGCTCAAATCATGGGTGAAAA...TACAGGTGCAGTTTCCACAACCACGTATGATTGACAGATGGTGAACGAAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGGAAGTTAGAATTGCTTaGCTGACACTTCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: PSDNLGRPDYSCEASTALEVRIA*LTLHCY
Trigger: ATAGCAATGAAGTGTCAGTCAAGCAATTCTAACTTC...CAGGGCTGTGCTTGCCTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp ACCTTAGGGACCTTCGTGTCTAGCTTCACACACCCACCTCCACATATGAACCAGTGTGCTATTTCTGGTTaGGAAAAATCACCAGAATGT +
Preference number: 4 (lower is better)
Translates to: TLGTFVSSFTHPPPHMNQCAISG*EKSPEC
Trigger: ACATTCTGGTGATTTTTCTCAACCAGAAATAGCACA...CTGGTTCATATGTGGAGGTGGGTGTGTGAAGCTAGACACGAAGGTCCCTAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp TTAATTCTGACTAACAGCAGCTACTTAAGAGTCCAATCATACAAAATCAGGAGATCCACCCCCTCCACCTaGAACAGAGCTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LILTNSSYLRVQSYKIRRSTPST*NRASSA
Trigger: GGCAGAGGAAGCTCTGTTTCAGGTGGAGGGGGTGGA...TCTCCTGATTTTGTATGATTGGACTCTTAAGTAGCTGCTGTTAGTCAGAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp ACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTGATGCAGTCATGGACTaGAAGGTAAACTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: TSNATDSAGGEIPRVYSIDAVMD*KVNWSH
Trigger: ATGGCTCCAGTTTACCTTTCAGTCCATGACTGCATC...AATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR TCA 90 bp CAGGCAATGAAGAACATCCAATGCCACAGATTCTGCAGGAGGAGAAATCCCAAGACCCAAAATGTTCTGTaGTTAAGCAGCAAAGTCCGT +
Preference number: 4 (lower is better)
Translates to: QAMKNIQCHRFCRRRNPKTQNVL*LSSKVR
Trigger: ACGGACTTTGCTGCTTAATCACAGAACATTTTGGGT...CTTGGGATTTCTCCTCCTGCAGAATCTGTGGCATTGGATGTTCTTCATTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp TTAAGAGTCCAATCATACAAAATCAGGAGAGTATTACCCTTTCTACAGCTAAGCCTCACAGGGCTCTGCTaGGAGGGAGCCATATTACGG +
Preference number: 4 (lower is better)
Translates to: LRVQSYKIRRVLPFLQLSLTGLC*EGAILR
Trigger: CCGTAATATGGCTCCCTCGCAGCAGAGCCCTGTGAG...GCTTAGCTGTAGAAAGGGTAATACTCTCCTGATTTTGTATGATTGGACTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp GTAGTGATGATTAAAGTTATCTGCCCTACAGACTCCACTGAATTTGAAGCTGTATGTTCTCTCGACTGCTaGTCCGACTACTTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: VVMIKVICPTDSTEFEAVCSLDC*SDYLGG
Trigger: GCCACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACA...TACAGCTTCAAATTCAGTGGAGTCTGTAGGGCAGATAACTTTAATCATCACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp CAAAACACCCTCTGCCTCATTAATCCACTAAGCTTTCTCAGCAAAAAGCTGTTTCACTGTTCTCTCGACTaGTGCTCCGACTACTTGGGT +
Preference number: 4 (lower is better)
Translates to: QNTLCLINPLSFLSKKLFHCSLD*CSDYLG
Trigger: ACCCAAGTAGTCGGAGCAGCAGTCGAGAGAACAGTG...AAACAGCTTTTTGCTGAGAAAGCTTAGTGGATTAATGAGGCAGAGGGTGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp AGGGCAGTTACCTGGCAAAGCTCTATTCTGGCCAAGTCACTGGGACTGAGTAGATGTTCAGACTCAGCTTaGTTTGTTTTTAATACTGGG +
Preference number: 4 (lower is better)
Translates to: RAVTWQSSILAKSLGLSRCSDSA*FVFNTG
Trigger: CCCAGTATTAAAAACAAAGCAAGCTGAGTCTGAACA...TCTACTCAGTCCCAGTGACTTGGCCAGAATAGAGCTTTGCCAGGTAACTGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
CDS-3UTR GCA 90 bp GATTCTGCAGGAGGAGAAATCCCAAGGGTATACAGTATTCCTGAGAAAGATCCCCATTCACTCGTTTGGTaGACTCAAGTGCTGAGAGAA +
Preference number: 4 (lower is better)
Translates to: DSAGGEIPRVYSIPEKDPHSLVW*TQVLRE
Trigger: TTCTCTCAGCACTTGAGTGCACCAAACGAGTGAATG...GGGATCTTTCTCAGGAATACTGTATACCCTTGGGATTTCTCCTCCTGCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
ENST00000424558.5
CDS-3UTR GCA 90 bp GTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGAACAATGCAGTCTCATaGAGCAGCACATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: VESPGPSDNLGRPDYSCENNAVS*SSTLKS
Trigger: TGATTTTAATGTGCTGCTGCATGAGACTGCATTGTT...CTCACAGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp CCCACCCACCAAAGGCATATCCTGCAAAGGGCTGTGAACTATCTTGGTGAACTGAACAATGCAGTCTCATaGAGCAGCACATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: PTHQRHILQRAVNYLGELNNAVS*SSTLKS
Trigger: TGATTTTAATGTGCTGCTGCATGAGACTGCATTGTT...CAGTTCACCAAGATAGTTCACAGCCCTTTGCAGGATATGCCTTTGGTGGGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295851.10
CDS-3UTR GCA 90 bp CTGGAGTGGAATCCCCAGGGCCTTCAGATAATCTGGGAAGACCTGACTATTCCTAACAATGCAGTCTCATaGAGCAGCACATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: LEWNPQGLQIIWEDLTIPNNAVS*SSTLKS
Trigger: TGATTTTAATGTGCTGCTGCATGAGACTGCATTGTT...AGGAATAGTCAGGTCTTCCCAGATTATCTGAAGGCCCTGGGGATTCCACTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp TTTATCATTTGTATCCTTCATTCTACTTTACTGGAGTGGAATCCCCAGGGCCTTAGCAGGGGTTCGGGATaGCTGCTAAGAGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: FIICILHSTLLEWNPQGLSRGSG*LLRAFP
Trigger: TGGAAATGCTCTTAGCAGGCATCCCGAACCCCTGCT...AAGGCCCTGGGGATTCCACTCCAGTAAAGTAGAATGAAGGATACAAATGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000261016.11
ENST00000261017.9
ENST00000261018.12
ENST00000295851.10
ENST00000422511.6
CDS-3UTR GCA 90 bp CCTTCAGATAATCTGGGAAGACCTGACTATTCCTGTGAGGCAAGCACAGCCCTGTGGAATATTAACTTCTaGATCCGACACCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: PSDNLGR