Pregenerated sensors for ABI1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136754Ensembl transcript IDs: ENST00000346832.10, ENST00000359188.8, ENST00000376137.8, ENST00000376138.7, ENST00000376139.6, ENST00000376140.4, ENST00000376142.6, ENST00000376160.5, ENST00000376166.5, ENST00000376170.8, ENST00000490841.6, ENST00000536334.5
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCACCTCACAGCCCGGATACAAACCGCCTACCCGCCCTCCCGCCTaGTATTGTGGGACGGCACCTCCTCCCCTTCCTCCTCACTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: STSQPGYKPPTRPPA*YCGTAPPPLPPHSL Trigger: GAGAGAGTGAGGAGGAAGGGGAGGAGGTGCCGTCCCACAATACCAGGCGGGAGGGCGGGTAGGCGGTTTGTATCCGGGCTGTGAGGTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376137.8 ENST00000376138.7 ENST00000490841.6 ENST00000536334.5 |
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| CDS TCA 90 bp | CGTCCCAGTGTTCCCCGGCCTGACATGGGAGGACTTGGCGGTTTCTaGGTAGGAGGATTTGTTCTCGACAGTGTGCCAGTTCTTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RPSVPRPDMGGLGGF*VGGFVLDSVPVLAG Trigger: GCCTGCAAGAACTGGCACACTGTCGAGAACAAATCCTCCTACTCAGAAACCGCCAAGTCCTCCCATGTCAGGCCGGGGAACACTGGGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000346832.10 ENST00000359188.8 ENST00000376137.8 ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 ENST00000376142.6 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 ENST00000490841.6 ENST00000536334.5 |
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| CDS CCA 90 bp | GTAGTAGAGTTGTGTCGAGATATCTGCCTGGTCATTGTGCCATACTaGGAACCAGGAGCTGAGCCCGGGGCTGGTCCAATAGTGGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: VVELCRDICLVIVPY*EPGAEPGAGPIVGG Trigger: GCCACCCACTATTGGACCAGCCCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000359188.8 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 |
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| CDS TCA 90 bp | TGCACCCTGGCCACGAAGCCTGTGAGAGGTATCTGTGGAGTCAACTaGGGCATAGGGGGAGGGGGTGGAGCAATAGAAACTGGTCCAATA | + |
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Preference number: 5 (lower is better) Translates to: CTLATKPVRGICGVN*GIGGGGGAIETGPI Trigger: TATTGGACCAGTTTCTATTGCTCCACCCCCTCCCCCTATGCCTCAGTTGACTCCACAGATACCTCTCACAGGCTTCGTGGCCAGGGTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000376137.8 |
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| CDS CCA 90 bp | GTAGTAGAGTTGTGTCGAGATATCTGCCTGGTCATTGTGCCATACTaGGAACCAGGAGCTGAGCCCGGGGCTGCTGGTCCAATAGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: VVELCRDICLVIVPY*EPGAEPGAAGPIVG Trigger: ACCCACTATTGGACCAGCAGCCCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 |
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| CDS CCA 90 bp | GTAGTAGAGTTGTGTCGAGATATCTGCCTGGTCATTGTGCCATACTaGGAACCAGGAGCTGAGCCCGGGGCTGCTATCACAGTGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: VVELCRDICLVIVPY*EPGAEPGAAITVLT Trigger: AGTGAGCACTGTGATAGCAGCCCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000346832.10 ENST00000376142.6 |
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| CDS GCA 90 bp | CCACCAGAAGATGTCGAAGAAGTAGTAGAGTTGTGTCGAGATATCTaGCTGGTCATTGTGCCATACTGGGAACCAGGAGCTGAGCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: PPEDVEEVVELCRDI*LVIVPYWEPGAEPG Trigger: CCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTACTTCTTCGACATCTTCTGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000346832.10 ENST00000359188.8 ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 ENST00000376142.6 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 |
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| CDS CCA 72 bp | CAGCCCGGATACAAACCGCCTACCCGCCCTCCCGCCTaGTATTGTGGGACGGCACCTCCTCCCCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: QPGYKPPTRPPA*YCGTAPPPLPP Trigger: AGGAGGAAGGGGAGGAGGTGCCGTCCCACAATACCAGGCGGGAGGGCGGGTAGGCGGTTTGTATCCGGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000376137.8 ENST00000376138.7 ENST00000490841.6 ENST00000536334.5 |
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| CDS TCA 72 bp | CTGCCTGGTCATTGTGCCATACTGGGAACCAGGAGCTaGGCCCGGGGCTGCTGGTCCAATAGTGGGTGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LPGHCAILGTRS*ARGCWSNSGWR Trigger: TCGCCACCCACTATTGGACCAGCAGCCCCGGGCTCAGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 |
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| CDS CCA 72 bp | TATCACAGTGCTCACTGGGAGAAGTGGTGCCAGAGGTaGTGCTGGTGGAGCTCCAGAAGGAGGAGGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: YHSAHWEKWCQR*CWWSSRRRRDR Trigger: TCTGTCCCTCCTCCTTCTGGAGCTCCACCAGCACCACCTCTGGCACCACTTCTCCCAGTGAGCACTGTGATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000346832.10 ENST00000376142.6 |
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| CDS TCA 72 bp | GTTCCCCGGCCTGACATGGGAGGACTTGGCGGTTTCTaGGTAGGAGGATTTGTTCTCGACAGTGTGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VPRPDMGGLGGF*VGGFVLDSVPV Trigger: AACTGGCACACTGTCGAGAACAAATCCTCCTACTCAGAAACCGCCAAGTCCTCCCATGTCAGGCCGGGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000346832.10 ENST00000359188.8 ENST00000376137.8 ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 ENST00000376142.6 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 ENST00000490841.6 ENST00000536334.5 |
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| CDS GCA 72 bp | GATGTCGAAGAAGTAGTAGAGTTGTGTCGAGATATCTaGCTGGTCATTGTGCCATACTGGGAACCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: DVEEVVELCRDI*LVIVPYWEPGA Trigger: AGCTCCTGGTTCCCAGTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTACTTCTTCGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000346832.10 ENST00000359188.8 ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 ENST00000376142.6 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 |
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| CDS CAA 72 bp | CTGTATCCACCAGAAGATGTCGAAGAAGTAGTAGAGTaGTGTCGAGATATCTGCCTGGTCATTGTGCCATAC | + |
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Preference number: 6 (lower is better) Translates to: LYPPEDVEEVVE*CRDICLVIVPY Trigger: GTATGGCACAATGACCAGGCAGATATCTCGACACAACTCTACTACTTCTTCGACATCTTCTGGTGGATACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000346832.10 ENST00000359188.8 ENST00000376138.7 ENST00000376139.6 ENST00000376140.4 ENST00000376142.6 ENST00000376160.5 ENST00000376166.5 ENST00000376170.8 |
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