RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABHD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000163686

Ensembl transcript IDs: ENST00000295962.8, ENST00000463756.5, ENST00000470440.1, ENST00000475982.5, ENST00000478253.6, ENST00000480457.1, ENST00000485900.1

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGA +
Preference number: 1 (lower is better)
Translates to: IRDGLPQGHWRSDRI*GRIPESGGCVRLGG
Trigger: TCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 90 bp GAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTaGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGC +
Preference number: 1 (lower is better)
Translates to: EPWIPGIRDGLPQGH*RSDRIWGRIPESGG
Trigger: GCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR GCA 90 bp TGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTaGGTCAGACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGC +
Preference number: 1 (lower is better)
Translates to: WRSDRIWGRIPESGG*VRLGGWEQMLCAEC
Trigger: GCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR TCA 90 bp GCGACTGCTGTGGGTTCACTCAGAACATACCTGACTGGTGGGTGCTaGATGAACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTG +
Preference number: 1 (lower is better)
Translates to: ATAVGSLRTYLTGGC*MNLPPMYPAAPDAL
Trigger: CAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCCACAGCAGTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 90 bp AACCAGGTCTATTTCGATGCTCCCTTCATCAGGGGATGTACACCATaGGGGTGGGAAGGGCAATTTCATTTGATAATTGGACAGTGGCAT +
Preference number: 1 (lower is better)
Translates to: NQVYFDAPFIRGCTP*GWEGQFHLIIGQWH
Trigger: ATGCCACTGTCCAATTATCAAATGAAATTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAATAGACCTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR CCA 90 bp ACACCATGGGGGTGGGAAGGGCAATTTCATTTGATAATTGGACAGTaGCATGAAAAGGCAATGAAGCACATCATGAGAAAGTCACTTTCT +
Preference number: 1 (lower is better)
Translates to: TPWGWEGQFHLIIGQ*HEKAMKHIMRKSLS
Trigger: AGAAAGTGACTTTCTCATGATGTGCTTCATTGCCTTTTCATGCCACTGTCCAATTATCAAATGAAATTGCCCTTCCCACCCCCATGGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR TCA 90 bp ATGGGGGTGGGAAGGGCAATTTCATTTGATAATTGGACAGTGGCATaGAAAGGCAATGAAGCACATCATGAGAAAGTCACTTTCTTTTTG +
Preference number: 1 (lower is better)
Translates to: MGVGRAISFDNWTVA*KGNEAHHEKVTFFL
Trigger: CAAAAAGAAAGTGACTTTCTCATGATGTGCTTCATTGCCTTTTCATGCCACTGTCCAATTATCAAATGAAATTGCCCTTCCCACCCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR-3UTR CCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGTGGCTGCGTCAGACTTaGGGGATGGGAGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRWLRQT*GMGADA
Trigger: AGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCA...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 90 bp ACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: TAFGAGSLRVVAASD*GDGSRCCVQNAGCS
Trigger: ACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp TGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGTTTGTGCCCAGGCCTGCCCCATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGT +
Preference number: 2 (lower is better)
Translates to: WAENPWSMRMEGLCPGLPHSGLA*PMSSAS
Trigger: ACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATG...GGGCAGGCCTGGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGTGGCTGCGTCAGACTTaGGGGATGGGAGCAGATGCT +
Preference number: 2 (lower is better)
Translates to: NLPPMYPAAPDALRARAMWLRQT*GMGADA
Trigger: AGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCA...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGAGCTCTGGGGAACCGTaGATACCAGGGATAAGGGAC +
Preference number: 2 (lower is better)
Translates to: NLPPMYPAAPDALRARAMSSGEP*IPGIRD
Trigger: GTCCCTTATCCCTGGTATCCACGGTTCCCCAGAGCT...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGAAAAGCCACTGCCCATaGAAGGGAATACACCTGATG +
Preference number: 2 (lower is better)
Translates to: NLPPMYPAAPDALRARAMKSHCP*KGIHLM
Trigger: CATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTT...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTTTCCTCCCTGGTCTTaGAGCCAATGGGCTGCAGTC +
Preference number: 2 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHFPPWS*SQWAAV
Trigger: GACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 90 bp GGGCTAGAGCAATGCCCCTCCATGCGTGTAAACATTTTCTACAGCTaGCCACTTTCCTCCCTGGTCTTGCAGCCAATGGGCTGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: GLEQCPSMRVNIFYS*PLSSLVLQPMGCSH
Trigger: ATGACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAAGTGGCAAGCTGTAGAAAATGTTTACACGCATGGAGGGGCATTGCTCTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR TCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGTTGGGGCAGGATCCCTaGGAGTGGTGGCTGCGTCAG +
Preference number: 2 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPELGQDP*EWWLRQ
Trigger: CTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAA...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGTGGTCCCCAAAGCTCTaGGGAACCGTGGATACCAGG +
Preference number: 2 (lower is better)
Translates to: RVQRMRTNAPIKATAHARWSPKL*GTVDTR
Trigger: CCTGGTATCCACGGTTCCCCAGAGCTTTGGGGACCA...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp CTGATAGTCTTCATGGTGAACATAGCGGACTTGCATGCCCAATGTCCTCCGCCACCAGGTCTATTTCGATaGTCCCTTCATCAGGGGATG +
Preference number: 2 (lower is better)
Translates to: LIVFMVNIADLHAQCPPPPGLFR*SLHQGM
Trigger: CATCCCCTGATGAAGGGAGCATCGAAATAGACCTGG...TGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR-3UTR GCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGCTAGGAAACCCACCCTaGCAGGTGCTCATTCTGCGA +
Preference number: 2 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPELGNPP*QVLILR
Trigger: TCGCAGAATGAGCACCTGGCAGGGTGGGTTTCCTAG...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 90 bp GAAGGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCGCCAGTACCTATAGCACAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: EGITELIVFMVNIAD*HAQCPPPVPIAQRG
Trigger: TCCTCTCTGTGCTATAGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR-3UTR GCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTCCTGAGAGTGGTGGCTaGGTCAGACTTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPPESGG*VRLGGW
Trigger: CCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGG...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGTGCTCATTCTGCGACTaGTGTGGGTTCACTCAGAAC +
Preference number: 2 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPECSFCD*CGFTQN
Trigger: GTTCTGAGTGAACCCACAGCAGTCGCAGAATGAGCA...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATACGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: PCKGIHLMQQKYLESPTIRSDRI*GRIPES
Trigger: ACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCG...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTCGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPRSDRI*GRIPES
Trigger: ACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCG...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGAATTATGGTCCAAGGTaGCTGCTTTGCACAAGCTTC +
Preference number: 2 (lower is better)
Translates to: RVQRMRTNAPIKATAHARNYGPR*LLCTSF
Trigger: GAAGCTTGTGCAAAGCAGCCACCTTGGACCATAATT...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATCCTGAGAGTGGTGGCTaGGTCAGACTTGGGGGATGG +
Preference number: 2 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNPESGG*VRLGGW
Trigger: CCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGG...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR GCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAATCCTATAAAAGCCACTaGCCATGCAAGGGAATACAC +
Preference number: 2 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKSYKSH*PCKGIH
Trigger: GTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGA...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAAAATTATGGTCCAAGGTaGCTGCTTTGCACAAGCTTC +
Preference number: 2 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKNYGPR*LLCTSF
Trigger: GAAGCTTGTGCAAAGCAGCCACCTTGGACCATAATT...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 72 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGA +
Preference number: 3 (lower is better)
Translates to: GLPQGHWRSDRI*GRIPESGGCVR
Trigger: TCTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CAA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLVAASD*GDGSRC
Trigger: GCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCAC...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 72 bp ATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTaGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAG +
Preference number: 3 (lower is better)
Translates to: IPGIRDGLPQGH*RSDRIWGRIPE
Trigger: CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR TCA 72 bp ACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTaGGGGCTAGAGCAATGCCCCTCCATGCGTGTAAAC +
Preference number: 3 (lower is better)
Translates to: TSHPCTLLLRTL*GLEQCPSMRVN
Trigger: GTTTACACGCATGGAGGGGCATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR TCA 72 bp GCCACATATCCTTGTGGGCAGAGAATCCGTGGAGCATaGGGATGGAGGGTTTGTGCCCAGGCCTGCCCCGGA +
Preference number: 3 (lower is better)
Translates to: ATYPCGQRIRGA*GWRVCAQACPG
Trigger: TCCGGGGCAGGCCTGGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR CCA 72 bp ATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATaGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAG +
Preference number: 3 (lower is better)
Translates to: IPESGGCVRLGG*EQMLCAECRLQ
Trigger: CTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR TCA 72 bp GTGGGTTCACTCAGAACATACCTGACTGGTGGGTGCTaGATGAACCTCCCACCCATGTACCCTGCTGCTCCG +
Preference number: 3 (lower is better)
Translates to: VGSLRTYLTGGC*MNLPPMYPAAP
Trigger: CGGAGCAGCAGGGTACATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 72 bp ACACTGAGCCACATATCCTTGTGGGCAGAGAATCCGTaGAGCATGAGGATGGAGGGTTTGTGCCCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: TLSHISLWAENP*SMRMEGLCPGL
Trigger: CAGGCCTGGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGGCTCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR CCA 72 bp AATATCTTGGAGGTTTTCGCGTGGTCCCCAAAGCTCTaGGGAACCGTGGATACCAGGGATAAGGGACGGGCT +
Preference number: 3 (lower is better)
Translates to: NILEVFAWSPKL*GTVDTRDKGRA
Trigger: AGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAGCTTTGGGGACCACGCGAAAACCTCCAAGATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CCA 72 bp TGCGACTGCTGTGGGTTCACTCAGAACATACCTGACTaGTGGGTGCTGAATGAACCTCCCACCCATGTACCC +
Preference number: 3 (lower is better)
Translates to: CDCCGFTQNIPD*WVLNEPPTHVP
Trigger: GGGTACATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCCACAGCAGTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CAA 90 bp CCACATATCCTTGTGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGTTTGTGGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCG +
Preference number: 3 (lower is better)
Translates to: PHILVGRESVEHEDGGFVVNIAD*HAQCPP
Trigger: CGGAGGACATTGGGCATGCAAGTCCGCTATGTTCAC...CACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR-3UTR CAA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGC +
Preference number: 3 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKVAASD*GDGSRC
Trigger: GCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCAC...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR GCA 72 bp ACTGATAGTCTTCATGGTGAACATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGTACCTATAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: TDSLHGEHSGLA*PMSSASTYSTE
Trigger: CTCTGTGCTATAGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR CCA 72 bp ACAGCTTGCCACTTTCCTCCCTGGTCTTGCAGCCAATaGGCTGCAGTCATACATGGGTCTCTATGTAAAACT +
Preference number: 3 (lower is better)
Translates to: TACHFPPWSCSQ*AAVIHGSLCKT
Trigger: AGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAAGTGGCAAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CAA 90 bp GTGAACATAGCGGACTTGCATGCCCAATGTCCTCCGCCAGTACCTATAGCACAGGAAGGGCAATTTCATTaGATAATTGGACAGTGGCAT +
Preference number: 3 (lower is better)
Translates to: VNIADLHAQCPPPVPIAQEGQFH*IIGQWH
Trigger: ATGCCACTGTCCAATTATCAAATGAAATTGCCCTTC...CTGTGCTATAGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR CCA 72 bp TATTTCGATGCTCCCTTCATCAGGGGATGTACACCATaGGGGTGGGAAGGGCAATTTCATTTGATAATTGGA +
Preference number: 3 (lower is better)
Translates to: YFDAPFIRGCTP*GWEGQFHLIIG
Trigger: TCCAATTATCAAATGAAATTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475982.5
3UTR TCA 72 bp CTAGTATGTTACATCCAAGGGTTCTTAGTAGCACATTaGAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTG +
Preference number: 3 (lower is better)
Translates to: LVCYIQGFLVAH*NRKEAHELLLV
Trigger: CACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTGCTACTAAGAACCCTTGGATGTAACATACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR-3UTR CAA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTTTTGTGAAAAATATCTaGGAGGTTTTCGCGTGGTCC +
Preference number: 3 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPFVKNI*EVFAWS
Trigger: GGACCACGCGAAAACCTCCAAGATATTTTTCACAAA...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCGGCCGCGCTCTGTTTaGGGGCTCCGGGGCGCTTAT +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAARPRSV*GLRGAY
Trigger: ATAAGCGCCCCGGAGCCCCCAAACAGAGCGCGGCCG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCCAGGGAGGAGCGGGTaGTGCCCTCATGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAAPGRSG*CPHVLA
Trigger: TGCCAGGACATGAGGGCACCACCCGCTCCTCCCTGG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGCCAGGGAGGAGCGGGTaGTGCCCTCATGTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLPGRSG*CPHVLA
Trigger: TGCCAGGACATGAGGGCACCACCCGCTCCTCCCTGG...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCTTCCTCAGGGTCACTaGCGCTCCGACCGCATTTGG +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAALPQGH*RSDRIW
Trigger: CCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGTCTGCTGGGGCACCTTaGAGCGGACATAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPESAGAP*SGHRSR
Trigger: TCTGCTCCTATGTCCGCTTCAAGGTGCCCCAGCAGA...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCTTAAAGGCGCAGCGTaGCGGTTCGCGTCCTCCGAC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGLKGAA*RFASSD
Trigger: GTCGGAGGACGCGAACCGGCACGCTGCGCCTTTAAG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR GCA 90 bp GGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCAGGATGGAGGGTTTGTaGCCAGGCCTGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GTVDTRDKGRASSGSLALRMEGL*PGLPRK
Trigger: CTTCCGGGGCAGGCCTGGGCACAAACCCTCCATCCT...GAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGAGTGCAGAATGCAGGCTaGAGTCGGGGCCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRVQNAG*SRGLSP
Trigger: TGGACTGAGGCCCCGACTGCAGCCTGCATTCTGCAC...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGACCTGAGAGTGGTGGCTaGGTCAGACTTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRPESGG*VRLGGW
Trigger: CCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGG...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGTACACCCCAGCCACCTaGCCACCCATGGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAYTPAT*PPMEVP
Trigger: AGGCACCTCCATGGGTGGCCAGGTGGCTGGGGTGTA...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGAGTTCCTCCGCGCGCTaGCTCACAGCGTTAAACCCG +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLASSSAR*LTALNP
Trigger: CGGGTTTAACGCTGTGAGGCAGCGCGCGGAGGAACT...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR GCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGATTGGGATGGCCAGCGTaGCGCCCGCAATCACAAACA +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRLGWPA*RPQSQT
Trigger: TGTTTGTGATTGCGGGCGGCACGCTGGCCATCCCAA...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGAGGATGGAGGGTTTGTaGCCAGGCCTGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMRMEGL*PGLPRK
Trigger: CTTCCGGGGCAGGCCTGGGCACAAACCCTCCATCCT...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGGGCCACCCATGGAGGTaGCTACCAGGTGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRGHPWR*LPGGKV
Trigger: AACCTTTCCACCTGGTAGGCACCTCCATGGGTGGCC...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGTGCAGAATGCAGGCTaGAGTCGGGGCCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLVQNAG*SRGLSP
Trigger: TGGACTGAGGCCCCGACTGCAGCCTGCATTCTGCAC...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCCTGAGAGTGGTGGCTaGGTCAGACTTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAPESGG*VRLGGW
Trigger: CCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGG...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGCCCACCCATGTACCCTaGTGCTCCGGACGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLPTHVP*CSGRSE
Trigger: CTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGG...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCACAAATGCCAGGATTaGGATGGCCAGCGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGHKCQD*DGQRAA
Trigger: GGCGGCACGCTGGCCATCCCAATCCTGGCATTTGTG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLARSDRI*GRIPES
Trigger: ACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCG...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCGCTCCGACCGCATTTaGGGCAGGATCCCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGRSDRI*GRIPES
Trigger: ACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCTTCCTCAGGGTCACTaGCGCTCCGACCGCATTTGG +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGLPQGH*RSDRIW
Trigger: CCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGCTCTGGGGAACCGTaGATACCAGGGATAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPESSGEP*IPGIRD
Trigger: GTCCCTTATCCCTGGTATCCACGGTTCCCCAGAGCT...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCTCTTTCAGGCTGGCTaGCTCCTGACCAGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGLFQAG*LLTSLN
Trigger: GTTGAGGCTGGTCAGGAGTCAGCCAGCCTGAAAGAG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR GCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGGGCCACCCATGGAGGTaGCTACCAGGTGGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAGHPWR*LPGGKV
Trigger: AACCTTTCCACCTGGTAGGCACCTCCATGGGTGGCC...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCACATCGACAAGGCCTTaGAGGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGTSTRP*RICWGT
Trigger: GGTGCCCCAGCAGATCCTGCAAGGCCTTGTCGATGT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCATGCTGTGTGCAGAATaGAGGCTGCAGTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGMLCAE*RLQSGP
Trigger: AGGCCCCGACTGCAGCCTGCATTCTGCACACAGCAT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGGCCAGGTGCTCATTCTaGGACTGCTGTGGGTTCACT +
Preference number: 4 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRARCSF*DCCGFT
Trigger: AGTGAACCCACAGCAGTCGCAGAATGAGCACCTGGC...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCCTGCTCTTTCAGGCTaGCTGACTCCTGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAPALSG*LTPDQP
Trigger: AGGCTGGTCAGGAGTCAGCCAGCCTGAAAGAGCAGG...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR CCA 90 bp TTGTGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGTTTGTGCCCAGGCCTGATGCCAGGATTGGGATaGCCAGCGTGCCGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: LWAENPWSMRMEGLCPGLMPGLG*PACRPQ
Trigger: TTGCGGGCGGCACGCTGGCCATCCCAATCCTGGCAT...CAGGCCTGGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGTGGCTGCGTCAGACTTaGGGGATGGGAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLWLRQT*GMGADA
Trigger: AGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCA...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 72 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASD*GDGSRCCVQNA
Trigger: TGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGTCTGCTGGGGCACCTTaGAGCGGACATAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMSAGAP*SGHRSR
Trigger: TCTGCTCCTATGTCCGCTTCAAGGTGCCCCAGCAGA...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGACTGGCAGTTGGCAATTaGCTTGGCCAACATGTCTGC +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRLAVGN*LGQHVC
Trigger: GCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAG...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGTTTGTGCCCAGGCCTaGCCCGGAAGGAATAACAGA +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLVCAQA*PGRNNR
Trigger: TCTGTTATTCCTTCCGGGGCAGGCCTGGGCACAAAC...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGACGGCGGCAGAGCCCTaGAGTTCTTTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLTAAEP*SSLSRC
Trigger: ACAACGGCTCAAAGAACTGCAGGGCTCTGCCGCCGT...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGATGGTCCAAGGTGGCTaGTTTGCACAAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPEMVQGG*FAQASQ
Trigger: CTGAGAAGCTTGTGCAAAGCAGCCACCTTGGACCAT...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGTTTCCTCCCTGGTCTTaGAGCCAATGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLFPPWS*SQWAAV
Trigger: GACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAA...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCTAGGAAACCCACCCTaGCAGGTGCTCATTCTGCGA +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGLGNPP*QVLILR
Trigger: TCGCAGAATGAGCACCTGGCAGGGTGGGTTTCCTAG...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGTGGGCAGAGAATCCGTaGAGCATGAGGATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAWAENP*SMRMEG
Trigger: ACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCA...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGAAGCCACATATCCTTGTaGGCAGAGAATCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRSHISL*AENPWS
Trigger: GCTCCACGGATTCTCTGCCCACAAGGATATGTGGCT...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGGGTGCCCTCATGTCCTaGCATGTCCACGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMGALMS*HVHADQ
Trigger: TTGGTCTGCGTGGACATGCCAGGACATGAGGGCACC...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGCCTTGCAGGATCTGCTaGGGCACCTTGAAGCGGACA +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLPCRIC*GTLKRT
Trigger: TGTCCGCTTCAAGGTGCCCCAGCAGATCCTGCAAGG...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGTGGTCCCCAAAGCTCTaGGGAACCGTGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMWSPKL*GTVDTR
Trigger: CCTGGTATCCACGGTTCCCCAGAGCTTTGGGGACCA...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCCTGCTCTTTCAGGCTaGCTGACTCTCTTCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAAPALSG*LTLFKE
Trigger: CTCTTTGAAGAGAGTCAGCCAGCCTGAAAGAGCAGG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478253.6
CDS-3UTR GCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGCATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLHSGLA*PMSSAS
Trigger: ACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATG...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAAAAGCCACTGCCCATaGAAGGGAATACACCTGATG +
Preference number: 4 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPEKSHCP*KGIHLM
Trigger: CATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTT...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGTTTCCTCCCTGGTCTTaGAGCCAATGGGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMFPPWS*SQWAAV
Trigger: GACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAA...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCAGGCCCACGAGTTGTTaGTTGTGTGTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGRPTSC*LCVEPE
Trigger: CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCAGCCACATATCCTTGTaGGCAGAGAATCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGSHISL*AENPWS
Trigger: GCTCCACGGATTCTCTGCCCACAAGGATATGTGGCT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCACACGAGACACAGGCTaGAGACATCCGATGGGTAGT +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGTRDTG*RHPMGS
Trigger: ACTACCCATCGGATGTCTCCAGCCTGTGTCTCGTGT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCTGGTCTTGCAGCCAATaGGCTGCAGTCATACATGGG +
Preference number: 4 (lower is better)
Translates to: GTVDTRDKGRASSGSLALWSCSQ*AAVIHG
Trigger: CCCATGTATGACTGCAGCCCATTGGCTGCAAGACCA...GAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGTGGTCTTGCAGCCAATaGGCTGCAGTCATACATGGG +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAWSCSQ*AAVIHG
Trigger: CCCATGTATGACTGCAGCCCATTGGCTGCAAGACCA...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCAGAACATACCTGACTaGTGGGTGCTGAATGAACCT +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAAQNIPD*WVLNEP
Trigger: AGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGATCTGCGTCGGAACCTTaGTCTTGTCCATGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRSASEP*SCPCSD
Trigger: ATCAGAACATGGACAAGATCAAGGTTCCGACGCAGA...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGTCTGCGTCGGAACCTTaGTCTTGTCCATGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRSASEP*SCPCSD
Trigger: ATCAGAACATGGACAAGATCAAGGTTCCGACGCAGA...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGCCAAGGTGGCTGCTTTaGACAAGCTTCTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLPRWLL*TSFSVT
Trigger: TGTCACTGAGAAGCTTGTGCAAAGCAGCCACCTTGG...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCCTATAAAAGCCACTaGCCATGCAAGGGAATACAC +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAASYKSH*PCKGIH
Trigger: GTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGA...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATATGCCAGGATTGGGATaGCCAGCGTGCCGCCCGCAA +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHMPGLG*PACRPQ
Trigger: TTGCGGGCGGCACGCTGGCCATCCCAATCCTGGCAT...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGCTGGAGACATCCGATaGGTAGTAAGCAGCATACAC +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLAGDIR*VVSSIH
Trigger: GTGTATGCTGCTTACTACCCATCGGATGTCTCCAGC...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGGACACATCCAGCACCTaGTCTTGTTTCCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMDTSST*SCFPQM
Trigger: CATCTGGGGGAAACAAGACCAGGTGCTGGATGTGTC...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCAGTTGGCAATTGACTTaGCCAACATGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GTVDTRDKGRASSGSLALSWQLT*PTCLPQ
Trigger: CTGGGGCAGACATGTTGGCCAAGTCAATTGCCAACT...GAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCTCCACCTGGCAGTTaGCAATTGACTTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLAPPGS*QLTWPT
Trigger: TGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGC...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGTCCAGAAGCTCCACCTaGCAGTTGGCAATTGACTTG +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLSRSST*QLAIDL
Trigger: CAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGA...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCGCTTGGCTGTCTTCCTaGGTCTTTCCATCACTACTG +
Preference number: 4 (lower is better)
Translates to: GTVDTRDKGRASSGSLALAWLSS*VFPSLL
Trigger: CAGTAGTGATGGAAAGACCCAGGAAGACAGCCAAGC...GAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGAATTATGGTCCAAGGTaGCTGCTTTGCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAANYGPR*LLCTSF
Trigger: GAAGCTTGTGCAAAGCAGCCACCTTGGACCATAATT...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGATTTCCCAACTGCTACTaGCTCTGGCAGAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRFPNCY*LWQKLK
Trigger: TTTCAGCTTCTGCCAGAGCCAGTAGCAGTTGGGAAA...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478253.6
CDS-3UTR TCA 90 bp GTACCTATAGCACAGAGAGGAACCAGGTCTATTTCGATGCTCCCTTCATCAGGGAGGCTGGCTGACTCCTaGCCAGCCTCAACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: VPIAQRGTRSISMLPSSGRLADS*PASTAW
Trigger: CCAGGCGGTTGAGGCTGGTCAGGAGTCAGCCAGCCT...CCCTGATGAAGGGAGCATCGAAATAGACCTGGTTCCTCTCTGTGCTATAGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGAGCCCTGCAGTTCTTTaGGCCGTTGTACAAATTGAT +
Preference number: 4 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRSPAVL*AVVQID
Trigger: ATCAATTTGTACAACGGCTCAAAGAACTGCAGGGCT...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGAATCTTGTCCATGTTCTaGTGGAGAGAGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRILSMF*WREYLD
Trigger: GTCCAGATACTCTCTCCATCAGAACATGGACAAGAT...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGACTAAAAAGTCGATTATaGGCTTGGCTGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRLKSRL*AWLSSW
Trigger: CCAGGAAGACAGCCAAGCTCATAATCGACTTTTTAG...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GAGAGGAACCAGGTCTATTTCGATGCTCCCTTCATCAGGGGATGTACACCATGGAGGATGGAGGGTTTGTaGCCAGGCCTGCCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: ERNQVYFDAPFIRGCTPWRMEGL*PGLPRK
Trigger: CTTCCGGGGCAGGCCTGGGCACAAACCCTCCATCCT...CCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAATAGACCTGGTTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR GCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGTTGCAGCCAATGGGCTaGAGTCATACATGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLLQPMG*SHTWVS
Trigger: AGAGACCCATGTATGACTGCAGCCCATTGGCTGCAA...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGTTCACTCATCTCTTCTaGGGTAGACGGGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLFTHLF*GRRDQG
Trigger: CCCTTGATCCCGTCTACCCCAGAAGAGATGAGTGAA...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCATTCTGCGACTGCTGTaGGTTCACTCAGAACATACC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGILRLL*VHSEHT
Trigger: GGTATGTTCTGAGTGAACCCACAGCAGTCGCAGAAT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp CCACATATCCTTGTGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGTTTGTGCTCTTTCAGGCTGGCTaGCTCCTGACCAGCCTCAAC +
Preference number: 4 (lower is better)
Translates to: PHILVGRESVEHEDGGFVLFQAG*LLTSLN
Trigger: GTTGAGGCTGGTCAGGAGTCAGCCAGCCTGAAAGAG...CACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCAGCCCTGCAGTTCTTTaGGCCGTTGTACAAATTGAT +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGSPAVL*AVVQID
Trigger: ATCAATTTGTACAACGGCTCAAAGAACTGCAGGGCT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGATCTTGTCCATGTTCTaGTGGAGAGAGTATCTGGAC +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLILSMF*WREYLD
Trigger: GTCCAGATACTCTCTCCATCAGAACATGGACAAGAT...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGTCTTTCCATCACTACTaGGTGCCCACAGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMSFHHY*VPTVFQ
Trigger: CTGGAAAACTGTGGGCACTCAGTAGTGATGGAAAGA...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATCTGACTGGTGGGTGCTaGATGAACCTCCCACCCATG +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHLTGGC*MNLPPM
Trigger: CATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAG...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCTCCTATAAAAGCCACTaGCCATGCAAGGGAATACAC +
Preference number: 4 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGSYKSH*PCKGIH
Trigger: GTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGA...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGACCCATGTACCCTGCTaGTCCGGACGCTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RVQRMRTNAPIKATAHARTHVPC*SGRSEG
Trigger: GCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGT...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATCCTTGCAGGATCTGCTaGGGCACCTTGAAGCGGACA +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHPCRIC*GTLKRT
Trigger: TGTCCGCTTCAAGGTGCCCCAGCAGATCCTGCAAGG...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGAGCCGTTGTACAAATTaGTTGTCAGTTGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: WGTVDTRDKGRASSGSLASRCTN*LSVEYC
Trigger: GCAGTACTCAACTGACAATCAATTTGTACAACGGCT...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGAGCCGTTGTACAAATTaGTTGTCAGTTGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: TRDKGRASSGSLALRPHLSRCTN*LSVEYC
Trigger: GCAGTACTCAACTGACAATCAATTTGTACAACGGCT...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGATTCTTAGTAGCACATTaGAATAGAAAAGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRFLVAH*NRKEAH
Trigger: GTGGGCCTCTTTTCTATTTCAATGTGCTACTAAGAA...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp ATTTCGATGCTCCCTTCATCAGGGGATGTACACCATGGGGGTGGGAAGGGCAATCATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: ISMLPSSGDVHHGGGKGNHSGLA*PMSSAS
Trigger: ACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATG...ATTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR GCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATCTTGGCCAACATGTCTaGCCCAGACACATCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHLGQHV*PRHIQH
Trigger: GTGCTGGATGTGTCTGGGGCAGACATGTTGGCCAAG...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CATATCCTTGTGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGTTTGTGCCCAGCCACATATCCTTGTaGGCAGAGAATCCGTGGAGC +
Preference number: 4 (lower is better)
Translates to: HILVGRESVEHEDGGFVPSHISL*AENPWS
Trigger: GCTCCACGGATTCTCTGCCCACAAGGATATGTGGCT...GGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp CTGATAGTCTTCATGGTGAACATAGCGGACTTGCATGCCCAATGTCCTCCGCCATGGGCAGAGAATCCGTaGAGCATGAGGATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LIVFMVNIADLHAQCPPPWAENP*SMRMEG
Trigger: ACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCA...TGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGGTTGTTGCTTGTGTGTaGAACCTGAGTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMVVACV*NLSLIT
Trigger: AGTAATCAGACTCAGGTTCCACACACAAGCAACAAC...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAATTGGGGCAGGATCCCTaGGAGTGGTGGCTGCGTCAG +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKLGQDP*EWWLRQ
Trigger: CTGACGCAGCCACCACTCTCAGGGATCCTGCCCCAA...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTTCCCCCAGATGATCTaGGTCGGAACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHFPQMI*VGTLIL
Trigger: CAAGATCAAGGTTCCGACGCAGATCATCTGGGGGAA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTGCTCATTCTGCGACTaGTGTGGGTTCACTCAGAAC +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHCSFCD*CGFTQN
Trigger: GTTCTGAGTGAACCCACAGCAGTCGCAGAATGAGCA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGCTAGGAAACCCACCCTaGCAGGTGCTCATTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RVQRMRTNAPIKATAHARLGNPP*QVLILR
Trigger: TCGCAGAATGAGCACCTGGCAGGGTGGGTTTCCTAG...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGAGGCATTCTACAAACTaGTGTATCCTCTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: NLPPMYPAAPDALRARAMRHSTN*CILLTC
Trigger: GCAAGTTAAGAGGATACACCAGTTTGTAGAATGCCT...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAATACACCCCAGCCACCTaGCCACCCATGGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKYTPAT*PPMEVP
Trigger: AGGCACCTCCATGGGTGGCCAGGTGGCTGGGGTGTA...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATGCTGGAGACATCCGATaGGTAGTAAGCAGCATACAC +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHAGDIR*VVSSIH
Trigger: GTGTATGCTGCTTACTACCCATCGGATGTCTCCAGC...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTTCACTCATCTCTTCTaGGGTAGACGGGATCAAGGG +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHFTHLF*GRRDQG
Trigger: CCCTTGATCCCGTCTACCCCAGAAGAGATGAGTGAA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CTGATAGTCTTCATGGTGAACATAGCGGACTTGCATGCCCAATGTCCTCCGCCAAGGGGATGTACACCATaGGGGTGGGAAGGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LIVFMVNIADLHAQCPPPRGCTP*GWEGQF
Trigger: AAATTGCCCTTCCCACCCCCATGGTGTACATCCCCT...TGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTCTTTCCATCACTACTaGGTGCCCACAGTTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHSFHHY*VPTVFQ
Trigger: CTGGAAAACTGTGGGCACTCAGTAGTGATGGAAAGA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGACCCACCCTGCCAGGTaGTCATTCTGCGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPETHPAR*SFCDCC
Trigger: ACAGCAGTCGCAGAATGAGCACCTGGCAGGGTGGGT...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAACACAAATGCCAGGATTaGGATGGCCAGCGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKHKCQD*DGQRAA
Trigger: GGCGGCACGCTGGCCATCCCAATCCTGGCATTTGTG...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGGGTGCCCTCATGTCCTaGCATGTCCACGCAGACCAA +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPEGALMS*HVHADQ
Trigger: TTGGTCTGCGTGGACATGCCAGGACATGAGGGCACC...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGAGAATCCGTGGAGCATaGGGATGGAGGGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPERIRGA*GWRVCA
Trigger: GGCACAAACCCTCCATCCTCATGCTCCACGGATTCT...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTCTGCTCCGGACGCTCTaGGGGCTAGAGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPLLRTL*GLEQCP
Trigger: GGGGCATTGCTCTAGCCCTCAGAGCGTCCGGAGCAG...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATACTGCTCCGGACGCTCTaGGGGCTAGAGCAATGCCCC +
Preference number: 4 (lower is better)
Translates to: PCKGIHLMQQKYLESPTILLRTL*GLEQCP
Trigger: GGGGCATTGCTCTAGCCCTCAGAGCGTCCGGAGCAG...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AGGCCTGCCCCGGAAGGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGCATCAAGATCCATCCTaGTCTTTCAGGCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: RPAPEGITELIVFMVNIAHQDPS*SFRLAD
Trigger: GTCAGCCAGCCTGAAAGAGCAGGATGGATCTTGATG...CGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCCTTCCGGGGCAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR GCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAAACATCGACAAGGCCTTaGAGGATCTGCTGGGGCACC +
Preference number: 4 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKTSTRP*RICWGT
Trigger: GGTGCCCCAGCAGATCCTGCAAGGCCTTGTCGATGT...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAATGCTGTGTGCAGAATaGAGGCTGCAGTCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKMLCAE*RLQSGP
Trigger: AGGCCCCGACTGCAGCCTGCATTCTGCACACAGCAT...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAACCCACCCTGCCAGGTaGTCATTCTGCGACTGCTGT +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKTHPAR*SFCDCC
Trigger: ACAGCAGTCGCAGAATGAGCACCTGGCAGGGTGGGT...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CCGGAAGGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTTGCATCCTGCTCTTTCAGGCTaGCTGACTCCTGACCAGCCT +
Preference number: 4 (lower is better)
Translates to: PEGITELIVFMVNIADLHPALSG*LTPDQP
Trigger: AGGCTGGTCAGGAGTCAGCCAGCCTGAAAGAGCAGG...ATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCCTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGTCCAGAAGCTCCACCTaGCAGTTGGCAATTGACTTG +
Preference number: 4 (lower is better)
Translates to: RVQRMRTNAPIKATAHARSRSST*QLAIDL
Trigger: CAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGA...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGGCTTGGCTGTCTTCCTaGGTCTTTCCATCACTACTG +
Preference number: 4 (lower is better)
Translates to: RVQRMRTNAPIKATAHARAWLSS*VFPSLL
Trigger: CAGTAGTGATGGAAAGACCCAGGAAGACAGCCAAGC...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAATGGTCCCCAAAGCTCTaGGGAACCGTGGATACCAGG +
Preference number: 4 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKWSPKL*GTVDTR
Trigger: CCTGGTATCCACGGTTCCCCAGAGCTTTGGGGACCA...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GATAGTCTTCATGGTGAACATAGCGGACTTGCATGCCCAATGTCCTCCGCCAGTTGTACACCATGGGGGTaGGAAGGGCAATTTCATTTG +
Preference number: 4 (lower is better)
Translates to: DSLHGEHSGLACPMSSASCTPWG*EGQFHL
Trigger: CAAATGAAATTGCCCTTCCCACCCCCATGGTGTACA...ACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGCTGGCAGTTGGCAATTaGCTTGGCCAACATGTCTGC +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPELAVGN*LGQHVC
Trigger: GCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAG...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAACATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKHSGLA*PMSSAS
Trigger: ACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATG...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGAAGGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTTGCATGCGTTTGTGCCCAGGCCTaGCCCGGAAGGAATAACAGA +
Preference number: 4 (lower is better)
Translates to: GRNNRTDSLHGEHSGLACVCAQA*PGRNNR
Trigger: TCTGTTATTCCTTCCGGGGCAGGCCTGGGCACAAAC...GCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR GCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTGTATCCTCTTAACTTaGCCATCTATGGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHCILLT*PSMDRS
Trigger: TGACCTGTCCATAGATGGGCAAGTTAAGAGGATACA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTACCCATGTACCCTGCTaGTCCGGACGCTCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPTHVPC*SGRSEG
Trigger: GCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGT...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAGCCAGGTGCTCATTCTaGGACTGCTGTGGGTTCACT +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKARCSF*DCCGFT
Trigger: AGTGAACCCACAGCAGTCGCAGAATGAGCACCTGGC...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTAGCTCTGGGGAACCGTaGATACCAGGGATAAGGGAC +
Preference number: 4 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATSSGEP*IPGIRD
Trigger: GTCCCTTATCCCTGGTATCCACGGTTCCCCAGAGCT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTTGCCACTTTCCTCCCTaGTCTTGCAGCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATCHFPP*SCSQWA
Trigger: AGCCCATTGGCTGCAAGACCAGGGAGGAAAGTGGCA...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 72 bp ACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCGCCAGTACCTATAGCA +
Preference number: 4 (lower is better)
Translates to: TELIVFMVNIAD*HAQCPPPVPIA
Trigger: TGCTATAGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATAGGCTGGCTGACTCCTaGCCAGCCTCAACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNRLADS*PASTAW
Trigger: CCAGGCGGTTGAGGCTGGTCAGGAGTCAGCCAGCCT...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR TCA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGCTAAAAAGTCGATTATaGGCTTGGCTGTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVQRMRTNAPIKATAHARLKSRL*AWLSSW
Trigger: CCAGGAAGACAGCCAAGCTCATAATCGACTTTTTAG...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGCTCTTTCAGGCTGGCTaGCTCTCTTCAAAGAGCACA +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPELFQAG*LSSKST
Trigger: TGTGCTCTTTGAAGAGAGTCAGCCAGCCTGAAAGAG...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478253.6
CDS-3UTR CCA 90 bp CATTTGATAATTGGACAGTGGCATGAAAAGGCAATGAAGCACATCATGAGAAAGCACAAATGCCAGGATTaGGATGGCCAGCGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLIIGQWHEKAMKHIMRKHKCQD*DGQRAA
Trigger: GGCGGCACGCTGGCCATCCCAATCCTGGCATTTGTG...CTTTCTCATGATGTGCTTCATTGCCTTTTCATGCCACTGTCCAATTATCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATAGGCATTCTACAAACTaGTGTATCCTCTTAACTTGC +
Preference number: 4 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHRHSTN*CILLTC
Trigger: GCAAGTTAAGAGGATACACCAGTTTGTAGAATGCCT...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTCTGGTGGGTGCTGAATaGACCTCCCACCCATGTACC +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPLVGAE*TSHPCT
Trigger: GGTACATGGGTGGGAGGTTCATTCAGCACCCACCAG...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTCATCAAGATCCATCCTaGTCTTTCAGGCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATHQDPS*SFRLAD
Trigger: GTCAGCCAGCCTGAAAGAGCAGGATGGATCTTGATG...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTACGGCGGCAGAGCCCTaGAGTTCTTTGAGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPTAAEP*SSLSRC
Trigger: ACAACGGCTCAAAGAACTGCAGGGCTCTGCCGCCGT...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAACCAAGGTGGCTGCTTTaGACAAGCTTCTCAGTGACA +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKPRWLL*TSFSVT
Trigger: TGTCACTGAGAAGCTTGTGCAAAGCAGCCACCTTGG...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAATGGTCCAAGGTGGCTaGTTTGCACAAGCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKMVQGG*FAQASQ
Trigger: CTGAGAAGCTTGTGCAAAGCAGCCACCTTGGACCAT...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTTGCATGCCCAACCAGGTCTATTTCGATaGTCCCTTCATCAGGGGATG +
Preference number: 4 (lower is better)
Translates to: GITELIVFMVNIADLHAQPGLFR*SLHQGM
Trigger: CATCCCCTGATGAAGGGAGCATCGAAATAGACCTGG...TTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CCA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTAGTTGGCAATTGACTTaGCCAACATGTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATSWQLT*PTCLPQ
Trigger: CTGGGGCAGACATGTTGGCCAAGTCAATTGCCAACT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTTGGCTGCGTCAGACTTaGGGGATGGGAGCAGATGCT +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPWLRQT*GMGADA
Trigger: AGCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCA...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAAAGTTGTTATGAGGGATaGGGACATCGACAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKSCYEG*GHRQGL
Trigger: AAGGCCTTGTCGATGTCCGCATCCCTCATAACAACT...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATATGGGCAGAGAATCCGTaGAGCATGAGGATGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PCKGIHLMQQKYLESPTIWAENP*SMRMEG
Trigger: ACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCA...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATATGCCACTTTCCTCCCTaGTCTTGCAGCCAATGGGCT +
Preference number: 4 (lower is better)
Translates to: PCKGIHLMQQKYLESPTICHFPP*SCSQWA
Trigger: AGCCCATTGGCTGCAAGACCAGGGAGGAAAGTGGCA...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 72 bp GGATGTACACCATGGGGGTGGGAAGGGCAATTTCATTaGATAATTGGACAGTGGCATGAAAAGGCAATGAAG +
Preference number: 4 (lower is better)
Translates to: GCTPWGWEGQFH*IIGQWHEKAMK
Trigger: CTTCATTGCCTTTTCATGCCACTGTCCAATTATCAAATGAAATTGCCCTTCCCACCCCCATGGTGTACATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR TCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATCTGGTGGGTGCTGAATaGACCTCCCACCCATGTACC +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNLVGAE*TSHPCT
Trigger: GGTACATGGGTGGGAGGTTCATTCAGCACCCACCAG...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATCTGACTGGTGGGTGCTaGATGAACCTCCCACCCATG +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNLTGGC*MNLPPM
Trigger: CATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAG...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAGCCTTCTTTCCCAACTaGTACTGGCTCTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PCKGIHLMQQKYLESPTIAFFPN*YWLWQK
Trigger: CTTCTGCCAGAGCCAGTAGCAGTTGGGAAAGAAGGC...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478253.6
CDS-3UTR CCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTGACACATCCAGCACCTaGTCTTGTTTCCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPDTSST*SCFPQM
Trigger: CATCTGGGGGAAACAAGACCAGGTGCTGGATGTGTC...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAGCTCCACCTGGCAGTTaGCAATTGACTTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PCKGIHLMQQKYLESPTIAPPGS*QLTWPT
Trigger: TGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGC...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGGTTGTTGCTTGTGTGTaGAACCTGAGTCTGATTACT +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPEVVACV*NLSLIT
Trigger: AGTAATCAGACTCAGGTTCCACACACAAGCAACAAC...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAATGTATCCTCTTAACTTaGCCATCTATGGACAGGTCA +
Preference number: 4 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKCILLT*PSMDRS
Trigger: TGACCTGTCCATAGATGGGCAAGTTAAGAGGATACA...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
3UTR CAA 72 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTaGTGTGTGGAACCTGAGTCTGATTACTTAGACAGA +
Preference number: 4 (lower is better)
Translates to: HIEIEKRPTSCC*CVEPESDYLDR
Trigger: TCTGTCTAAGTAATCAGACTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTTTGTTGTCTGTGTTGTaGACAGAAGCTAAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATLLSVL*TEAKKS
Trigger: CGACTTTTTAGCTTCTGTGCACAACACAGACAACAA...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTAAAAGCCACTGCCCATaGAAGGGAATACACCTGATG +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPKSHCP*KGIHLM
Trigger: CATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTT...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATAGGCCCACGAGTTGTTaGTTGTGTGTGGAACCTGAG +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNRPTSC*LCVEPE
Trigger: CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCT...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATACACGAGACACAGGCTaGAGACATCCGATGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNTRDTG*RHPMGS
Trigger: ACTACCCATCGGATGTCTCCAGCCTGTGTCTCGTGT...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTCAGAACATACCTGACTaGTGGGTGCTGAATGAACCT +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPQNIPD*WVLNEP
Trigger: AGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTG...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATTTCCCCCAGATGATCTaGGTCGGAACCTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNFPQMI*VGTLIL
Trigger: CAAGATCAAGGTTCCGACGCAGATCATCTGGGGGAA...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATATTCTGCGACTGCTGTaGGTTCACTCAGAACATACC +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNILRLL*VHSEHT
Trigger: GGTATGTTCTGAGTGAACCCACAGCAGTCGCAGAAT...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAACTTAAATTAGACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTGGTAGATTTCATGGCTaGGGTTTCTTATTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KLKLDLNNRVQRMRTNAPGRFHG*GFLFCS
Trigger: GGAACAAAATAAGAAACCCCAGCCATGAAATCTACC...AGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTCTAATTTAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR TCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATTTCTTAGTAGCACATTaGAATAGAAAAGAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNFLVAH*NRKEAH
Trigger: GTGGGCCTCTTTTCTATTTCAATGTGCTACTAAGAA...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR GCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATTTGTTGTCTGTGTTGTaGACAGAAGCTAAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNLLSVL*TEAKKS
Trigger: CGACTTTTTAGCTTCTGTGCACAACACAGACAACAA...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CCA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATGGTAGATTTCATGGCTaGGGTTTCTTATTTTGTTCC +
Preference number: 4 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNGRFHG*GFLFCS
Trigger: GGAACAAAATAAGAAACCCCAGCCATGAAATCTACC...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 90 bp CGGGGGACCGCAAGTTGCCGGCGGGTACCTGGCTGGACAGCATCCTaGTTCAAGTGTTTCGACACGGAAGGGGCGCAAGGGCACGGGAGC +
Preference number: 5 (lower is better)
Translates to: RGTASCRRVPGWTAS*FKCFDTEGAQGHGS
Trigger: GCTCCCGTGCCCTTGCGCCCCTTCCGTGTCGAAACACTTGAATCAGGATGCTGTCCAGCCAGGTACCCGCCGGCAACTTGCGGTCCCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS GCA 90 bp CCTGGCCTCGCTGTGGGCTCAGGGGCGCAAACCCTGCACGTGCACTaGCCTGCAGCCGGCGTTACACAATCCGCATTTCTAAGGCAGCCG +
Preference number: 5 (lower is better)
Translates to: PGLAVGSGAQTLHVH*PAAGVTQSAFLRQP
Trigger: CGGCTGCCTTAGAAATGCGGATTGTGTAACGCCGGCTGCAGGGCAGTGCACGTGCAGGGTTTGCGCCCCTGAGCCCACAGCGAGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS CCA 90 bp CTCACTCTGTCCCCCGGCTTCAAGAGGCTGGCTGGACCCAGGAAATaGGGCGCCGGGTTTCGGGCATCTCAAACCTATCCAGGCAGCGGG +
Preference number: 5 (lower is better)
Translates to: LTLSPGFKRLAGPRK*GAGFRASQTYPGSG
Trigger: CCCGCTGCCTGGATAGGTTTGAGATGCCCGAAACCCGGCGCCCCATTTCCTGGGTCCAGCCAGCCTCTTGAAGCCGGGGGACAGAGTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS-3UTR CAA 90 bp ATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: IRDGLPQGHWRSDRIWGRVAASD*GDGSRC
Trigger: GCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCAC...CCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 90 bp TGCCCTGCAGCCGGCGTTACACAATCCGCATTTCTAAGGCAGCCGTaGAACCTGTGTCGCTGTAGGCGGGGGACCGCAAGTTGCCGGCGG +
Preference number: 5 (lower is better)
Translates to: CPAAGVTQSAFLRQP*NLCRCRRGTASCRR
Trigger: CCGCCGGCAACTTGCGGTCCCCCGCCTACAGCGACACAGGTTTCACGGCTGCCTTAGAAATGCGGATTGTGTAACGCCGGCTGCAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS-3UTR CAA 90 bp GGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCGTGGCTGCGTCAGACTaGGGGGATGGGAGCAGATGC +
Preference number: 5 (lower is better)
Translates to: GTVDTRDKGRASSGSLALVAASD*GDGSRC
Trigger: GCATCTGCTCCCATCCCCCAAGTCTGACGCAGCCAC...GAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGCTTTCCTCCCTGGTCTaGCAGCCAATGGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPELSSLV*QPMGCS
Trigger: ACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAAG...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS GCA 90 bp CCTCGCTGTGGGCTCAGGGGCGCAAACCCTGCACGTGCACTGCCCTaGAGCCGGCGTTACACAATCCGCATTTCTAAGGCAGCCGTGAAA +
Preference number: 5 (lower is better)
Translates to: PRCGLRGANPARALP*SRRYTIRISKAAVK
Trigger: TTTCACGGCTGCCTTAGAAATGCGGATTGTGTAACGCCGGCTGCAGGGCAGTGCACGTGCAGGGTTTGCGCCCCTGAGCCCACAGCGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATGCGGCCGCGCTCTGTTaGGGGGCTCCGGGGCGCTTA +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHAAALC*GAPGRL
Trigger: TAAGCGCCCCGGAGCCCCCAAACAGAGCGCGGCCGC...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS-3UTR CAA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGAGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCG +
Preference number: 5 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRVNIAD*HAQCPP
Trigger: CGGAGGACATTGGGCATGCAAGTCCGCTATGTTCAC...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGCAGTTGGCAATTGACTaGGCCAACATGTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: GLPQGHWRSDRIWGRIPEQLAID*ANMSAP
Trigger: TGGGGCAGACATGTTGGCCAAGTCAATTGCCAACTG...CTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 90 bp ATGAGATTCCGTCCTCACTCTGTCCCCCGGCTTCAAGAGGCTGGCTaGACCCAGGAAATGGGGCGCCGGGTTTCGGGCATCTCAAACCTA +
Preference number: 5 (lower is better)
Translates to: MRFRPHSVPRLQEAG*TQEMGRRVSGISNL
Trigger: TAGGTTTGAGATGCCCGAAACCCGGCGCCCCATTTCCTGGGTCCAGCCAGCCTCTTGAAGCCGGGGGACAGAGTGAGGACGGAATCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS-3UTR CAA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGACCCACGAGTTGTTGCTaGTGTGTGGAACCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRPTSCC*CVEPES
Trigger: AGACTCAGGTTCCACACACAAGCAACAACTCGTGGG...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp ACTGAGCCACATATCCTTGTGGGCAGAGAATCCGTGGAGCATGAGGATGGAGGGCCACAAATGCCAGGATaGGGATGGCCAGCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: TEPHILVGRESVEHEDGGPQMPG*GWPACR
Trigger: GCGGCACGCTGGCCATCCCAATCCTGGCATTTGTGG...CCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGGCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATATGAGGATGGAGGGTTaGTGCCCAGGCCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHMRMEG*CPGLPR
Trigger: CCGGGGCAGGCCTGGGCACAAACCCTCCATCCTCAT...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp ATTTCGATGCTCCCTTCATCAGGGGATGTACACCATGGGGGTGGGAAGGGCAATATGAGGATGGAGGGTTaGTGCCCAGGCCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: ISMLPSSGDVHHGGGKGNMRMEG*CPGLPR
Trigger: CCGGGGCAGGCCTGGGCACAAACCCTCCATCCTCAT...ATTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CAA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGATCCAGCACCTGGTCTaGTTTCCCCCAGATGATCTG +
Preference number: 5 (lower is better)
Translates to: TRDKGRASSGSLALRPHLIQHLV*FPPDDL
Trigger: CAGATCATCTGGGGGAAACAAGACCAGGTGCTGGAT...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp ACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCTCCGACCGCATTTGCCTGGCAGTTGGCAATaGACTTGGCCAACATGTCTG +
Preference number: 5 (lower is better)
Translates to: TRDKGRASSGSLALRPHLPGSWQ*TWPTCL
Trigger: CAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGG...CAAATGCGGTCGGAGCGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACTTGGGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTGCAGTCGGGGCAAAGAGGCCCACGAGTaGTTGCTTGTGTGTGGAACC +
Preference number: 5 (lower is better)
Translates to: DLGDGSRCCVQNAGCSRGKEAHE*LLVCGT
Trigger: GGTTCCACACACAAGCAACAACTCGTGGGCCTCTTT...GCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCCCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 90 bp AACTTGACCACACTGAGCCACATATCCTTGTGGGCAGAGAATCCGTaGAGCATGAGGATGGAGGGTTTGTGCCCAGGCCTGCCCCGGAAG +
Preference number: 5 (lower is better)
Translates to: NLTTLSHISLWAENP*SMRMEGLCPGLPRK
Trigger: CTTCCGGGGCAGGCCTGGGCACAAACCCTCCATCCTCATGCTCCACGGATTCTCTGCCCACAAGGATATGTGGCTCAGTGTGGTCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS-3UTR CAA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGCCTCAGTCCAGCTTCTaGTTGTTGTCTGTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAPQSSF*LLSVLC
Trigger: GCACAACACAGACAACAACAAGAAGCTGGACTGAGG...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATGACATCGACAAGGCCTaGCAGGATCTGCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHDIDKA*QDLLGH
Trigger: GTGCCCCAGCAGATCCTGCAAGGCCTTGTCGATGTC...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp TGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGGCGAAGTCGATTATGAGCTaGGCTGTCTTCCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: WGTVDTRDKGRASSGSLAKSIMS*AVFLGL
Trigger: AAGACCCAGGAAGACAGCCAAGCTCATAATCGACTT...CGCCAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGGCAGGATCCCTGAGAGTGGTGGCTGCGTCAGACTTGGGGGATGGGAGCAGATCCAGCTTCTTGTTGTaGTCTGTGTTGTGCACAGAA +
Preference number: 5 (lower is better)
Translates to: GAGSLRVVAASDLGDGSRSSFLL*SVLCTE
Trigger: TTCTGTGCACAACACAGACAACAACAAGAAGCTGGA...TCTGCTCCCATCCCCCAAGTCTGACGCAGCCACCACTCTCAGGGATCCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 90 bp GAAGCGGACATAGGAGCAGAGCTGAAGCATTTCACTCATCTCTTCTaGGGTAGACGGGATCAAGGGAATCTTCTCCACGGCGGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: EADIGAELKHFTHLF*GRRDQGNLLHGGRA
Trigger: GGCTCTGCCGCCGTGGAGAAGATTCCCTTGATCCCGTCTACCCCAGAAGAGATGAGTGAAATGCTTCAGCTCTGCTCCTATGTCCGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
CDS-3UTR CAA 90 bp GTCACTGGCGCTCCGACCGCATTTGGGGCAGGATCCCTGAGAGTGGTGGCTGCGCAGTTCTTTGAGCCGTaGTACAAATTGATTGTCAGT +
Preference number: 5 (lower is better)
Translates to: VTGAPTAFGAGSLRVVAAQFFEP*YKLIVS
Trigger: ACTGACAATCAATTTGTACAACGGCTCAAAGAACTG...CGCAGCCACCACTCTCAGGGATCCTGCCCCAAATGCGGTCGGAGCGCCAGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AACCTCCCACCCATGTACCCTGCTGCTCCGGACGCTCTGAGGGCTAGAGCAATGCAGTCCAGCTTCTTGTaGTTGTCTGTGTTGTGCACA +
Preference number: 5 (lower is better)
Translates to: NLPPMYPAAPDALRARAMQSSFL*LSVLCT
Trigger: TGTGCACAACACAGACAACAACAAGAAGCTGGACTG...CATTGCTCTAGCCCTCAGAGCGTCCGGAGCAGCAGGGTACATGGGTGGGAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 90 bp TCCACGGCGGCAGAGCCCTGCAGTTCTTTGAGCCGTTGTACAAATTaGTTGTCAGTTGAGTACTGCAGGCCAGCAGGACACACGAGACAC +
Preference number: 5 (lower is better)
Translates to: STAAEPCSSLSRCTN*LSVEYCRPAGHTRH
Trigger: GTGTCTCGTGTGTCCTGCTGGCCTGCAGTACTCAACTGACAATCAATTTGTACAACGGCTCAAAGAACTGCAGGGCTCTGCCGCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
CDS-3UTR CAA 90 bp ATTTCGATGCTCCCTTCATCAGGGGATGTACACCATGGGGGTGGGAAGGGCAATCTGAGCCACATATCCTaGTGGGCAGAGAATCCGTGG +
Preference number: 5 (lower is better)
Translates to: ISMLPSSGDVHHGGGKGNLSHIS*WAENPW
Trigger: CCACGGATTCTCTGCCCACAAGGATATGTGGCTCAG...ATTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATCTGAGCCACATATCCTaGTGGGCAGAGAATCCGTGG +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHLSHIS*WAENPW
Trigger: CCACGGATTCTCTGCCCACAAGGATATGTGGCTCAG...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGGACATCGACAAGGCCTaGCAGGATCTGCTGGGGCAC +
Preference number: 5 (lower is better)
Translates to: RVQRMRTNAPIKATAHARDIDKA*QDLLGH
Trigger: GTGCCCCAGCAGATCCTGCAAGGCCTTGTCGATGTC...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 90 bp CTCTCTTCAAAGAGCACAGCCTTCTTTCCCAACTGCTACTGGCTCTaGCAGAAGCTGAAAATGAGATTCCGTCCTCACTCTGTCCCCCGG +
Preference number: 5 (lower is better)
Translates to: LSSKSTAFFPNCYWL*QKLKMRFRPHSVPR
Trigger: CCGGGGGACAGAGTGAGGACGGAATCTCATTTTCAGCTTCTGCCAGAGCCAGTAGCAGTTGGGAAAGAAGGCTGTGCTCTTTGAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTATGAGGATGGAGGGTTaGTGCCCAGGCCTGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATMRMEG*CPGLPR
Trigger: CCGGGGCAGGCCTGGGCACAAACCCTCCATCCTCAT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp CTCTGGGGAACCGTGGATACCAGGGATAAGGGACGGGCTTCCTCAGGGTCACTGAGGTGGAAAGGTTTTTaGTTCAGCTTCAGGCATTCT +
Preference number: 5 (lower is better)
Translates to: LWGTVDTRDKGRASSGSLRWKGF*FSFRHS
Trigger: AGAATGCCTGAAGCTGAACAAAAAACCTTTCCACCT...CAGTGACCCTGAGGAAGCCCGTCCCTTATCCCTGGTATCCACGGTTCCCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATCAGTTGGCAATTGACTaGGCCAACATGTCTGCCCCA +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHQLAID*ANMSAP
Trigger: TGGGGCAGACATGTTGGCCAAGTCAATTGCCAACTG...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGCTTTCCTCCCTGGTCTaGCAGCCAATGGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: RVQRMRTNAPIKATAHARLSSLV*QPMGCS
Trigger: ACTGCAGCCCATTGGCTGCAAGACCAGGGAGGAAAG...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 90 bp GGATCAAGGGAATCTTCTCCACGGCGGCAGAGCCCTGCAGTTCTTTaGGCCGTTGTACAAATTGATTGTCAGTTGAGTACTGCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GSRESSPRRQSPAVL*AVVQIDCQLSTAGQ
Trigger: CTGGCCTGCAGTACTCAACTGACAATCAATTTGTACAACGGCTCAAAGAACTGCAGGGCTCTGCCGCCGTGGAGAAGATTCCCTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
CDS CCA 90 bp CTTTCCATCACTACTGAGTGCCCACAGTTTTCCAGAAGCTCCACCTaGCAGTTGGCAATTGACTTGGCCAACATGTCTGCCCCAGACACA +
Preference number: 5 (lower is better)
Translates to: LSITTECPQFSRSST*QLAIDLANMSAPDT
Trigger: TGTGTCTGGGGCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGAAAACTGTGGGCACTCAGTAGTGATGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTCCACAAATGCCAGGATaGGGATGGCCAGCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATPQMPG*GWPACR
Trigger: GCGGCACGCTGGCCATCCCAATCCTGGCATTTGTGG...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAACCACAAATGCCAGGATaGGGATGGCCAGCGTGCCGC +
Preference number: 5 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKPQMPG*GWPACR
Trigger: GCGGCACGCTGGCCATCCCAATCCTGGCATTTGTGG...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGGTGTATCCTCTTAACTaGCCCATCTATGGACAGGTC +
Preference number: 5 (lower is better)
Translates to: RVQRMRTNAPIKATAHARVYPLN*PIYGQV
Trigger: GACCTGTCCATAGATGGGCAAGTTAAGAGGATACAC...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATAGGTGGAAAGGTTTTTaGTTCAGCTTCAGGCATTCT +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHRWKGF*FSFRHS
Trigger: AGAATGCCTGAAGCTGAACAAAAAACCTTTCCACCT...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTAGCTCCACCTGGCAGTaGGCAATTGACTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATSSTWQ*AIDLAN
Trigger: GTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTATCCAGCACCTGGTCTaGTTTCCCCCAGATGATCTG +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATIQHLV*FPPDDL
Trigger: CAGATCATCTGGGGGAAACAAGACCAGGTGCTGGAT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGGTTCACTCAGAACATACCTGACTGGTGGGTGCTGAATGAACCTCCCACCCATTTGTTGTTGTCTGTGTaGTGCACAGAAGCTAAAAAG +
Preference number: 5 (lower is better)
Translates to: GFTQNIPDWWVLNEPPTHLLLSV*CTEAKK
Trigger: CTTTTTAGCTTCTGTGCACAACACAGACAACAACAA...ATGGGTGGGAGGTTCATTCAGCACCCACCAGTCAGGTATGTTCTGAGTGAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTCCCACGAGTTGTTGCTaGTGTGTGGAACCTGAGTCT +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATPTSCC*CVEPES
Trigger: AGACTCAGGTTCCACACACAAGCAACAACTCGTGGG...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp TATTTCGATGCTCCCTTCATCAGGGGATGTACACCATGGGGGTGGGAAGGGCAAGAAGGGCAATTTCATTaGATAATTGGACAGTGGCAT +
Preference number: 5 (lower is better)
Translates to: YFDAPFIRGCTPWGWEGQEGQFH*IIGQWH
Trigger: ATGCCACTGTCCAATTATCAAATGAAATTGCCCTTC...TTGCCCTTCCCACCCCCATGGTGTACATCCCCTGATGAAGGGAGCATCGAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS TCA 90 bp TTCCCCCAGATGATCTGCGTCGGAACCTTGATCTTGTCCATGTTCTaGTGGAGAGAGTATCTGGACTTCTCACTGACGATTTCCAAAAAC +
Preference number: 5 (lower is better)
Translates to: FPQMICVGTLILSMF*WREYLDFSLTISKN
Trigger: GTTTTTGGAAATCGTCAGTGAGAAGTCCAGATACTCTCTCCATCAGAACATGGACAAGATCAAGGTTCCGACGCAGATCATCTGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000470440.1
ENST00000478253.6
CDS GCA 90 bp GGAGAAAGGCTCAGCTCAGGGCTGCTACATCTTTCACGCTGCTCATaGAATAATAGATTCTTATCAGTGCTGAAGGCCACAGAAGAAATG +
Preference number: 5 (lower is better)
Translates to: GERLSSGLLHLSRCS*NNRFLSVLKATEEM
Trigger: CATTTCTTCTGTGGCCTTCAGCACTGATAAGAATCTATTATTGCATGAGCAGCGTGAAAGATGTAGCAGCCCTGAGCTGAGCCTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS GCA 90 bp CAACAAGGAGAAAGGCTCAGCTCAGGGCTGCTACATCTTTCACGCTaGTCATGCAATAATAGATTCTTATCAGTGCTGAAGGCCACAGAA +
Preference number: 5 (lower is better)
Translates to: QQGERLSSGLLHLSR*SCNNRFLSVLKATE
Trigger: TTCTGTGGCCTTCAGCACTGATAAGAATCTATTATTGCATGAGCAGCGTGAAAGATGTAGCAGCCCTGAGCTGAGCCTTTCTCCTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS-3UTR CAA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGCAGTCCAGCTTCTTGTaGTTGTCTGTGTTGTGCACA +
Preference number: 5 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPEQSSFL*LSVLCT
Trigger: TGTGCACAACACAGACAACAACAAGAAGCTGGACTG...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAACCTCAGTCCAGCTTCTaGTTGTTGTCTGTGTTGTGC +
Preference number: 5 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKPQSSF*LLSVLC
Trigger: GCACAACACAGACAACAACAAGAAGCTGGACTGAGG...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGTTTGTGAAAAATATCTaGGAGGTTTTCGCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: RVQRMRTNAPIKATAHARFVKNI*EVFAWS
Trigger: GGACCACGCGAAAACCTCCAAGATATTTTTCACAAA...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 90 bp TCTTGTTGTTGTCTGTGTTGTGCACAGAAGCTAAAAAGTCGATTATaGGCTTGGCTGTCTTCCTGGGTCTTTCCATCACTACTGAGTGCC +
Preference number: 5 (lower is better)
Translates to: SCCCLCCAQKLKSRL*AWLSSWVFPSLLSA
Trigger: GGCACTCAGTAGTGATGGAAAGACCCAGGAAGACAGCCAAGCTCATAATCGACTTTTTAGCTTCTGTGCACAACACAGACAACAACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATACTGAGCCACATATCCTaGTGGGCAGAGAATCCGTGG +
Preference number: 5 (lower is better)
Translates to: PCKGIHLMQQKYLESPTILSHIS*WAENPW
Trigger: CCACGGATTCTCTGCCCACAAGGATATGTGGCTCAG...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTGCCCATGCAAGGCAGTTCTTTGAGCCGTaGTACAAATTGATTGTCAGT +
Preference number: 5 (lower is better)
Translates to: RVQRMRTNAPIKATAHARQFFEP*YKLIVS
Trigger: ACTGACAATCAATTTGTACAACGGCTCAAAGAACTG...CCTTGCATGGGCAGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGCTCCACCTGGCAGTaGGCAATTGACTTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: PCKGIHLMQQKYLESPTISSTWQ*AIDLAN
Trigger: GTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCT...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GACCTAAACAACAGGGTTCAGCGAATGAGGACTAATGCTCCTATAAAAGCCACTAAGTCGATTATGAGCTaGGCTGTCTTCCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: DLNNRVQRMRTNAPIKATKSIMS*AVFLGL
Trigger: AAGACCCAGGAAGACAGCCAAGCTCATAATCGACTT...AGTGGCTTTTATAGGAGCATTAGTCCTCATTCGCTGAACCCTGTTGTTTAGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp GGTCTTGCAGCCAATGGGCTGCAGTCATACATGGGTCTCTATGTAAAACTTAAATTCTTTGGAAGGAACTaGACCACACTGAGCCACATA +
Preference number: 5 (lower is better)
Translates to: GLAANGLQSYMGLYVKLKFFGRN*TTLSHI
Trigger: TATGTGGCTCAGTGTGGTCAAGTTCCTTCCAAAGAA...TTTAAGTTTTACATAGAGACCCATGTATGACTGCAGCCCATTGGCTGCAAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp CCATGCAAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAAAGAGGCCCACGAGTaGTTGCTTGTGTGTGGAACC +
Preference number: 5 (lower is better)
Translates to: PCKGIHLMQQKYLESPTIKEAHE*LLVCGT
Trigger: GGTTCCACACACAAGCAACAACTCGTGGGCCTCTTT...TATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTTGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp CACATTGAAATAGAAAAGAGGCCCACGAGTTGTTGCTTGTGTGTGGAACCTGAGTTGTTGTTGTCTGTGTaGTGCACAGAAGCTAAAAAG +
Preference number: 5 (lower is better)
Translates to: HIEIEKRPTSCCLCVEPELLLSV*CTEAKK
Trigger: CTTTTTAGCTTCTGTGCACAACACAGACAACAACAA...CTCAGGTTCCACACACAAGCAACAACTCGTGGGCCTCTTTTCTATTTCAATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp TGCTCCTATAAAAGCCACTGCCCATGCAAGGGAATACACCTGATGCAACAAAAATTTGTGAAAAATATCTaGGAGGTTTTCGCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: CSYKSHCPCKGIHLMQQKFVKNI*EVFAWS
Trigger: GGACCACGCGAAAACCTCCAAGATATTTTTCACAAA...TTTTTGTTGCATCAGGTGTATTCCCTTGCATGGGCAGTGGCTTTTATAGGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS-3UTR CAA 90 bp AAGGGAATACACCTGATGCAACAAAAATATCTTGAGTCTCCAACTATAAGGAATCCTGGCAGTTGGCAATaGACTTGGCCAACATGTCTG +
Preference number: 5 (lower is better)
Translates to: KGIHLMQQKYLESPTIRNPGSWQ*TWPTCL
Trigger: CAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGG...ATTCCTTATAGTTGGAGACTCAAGATATTTTTGTTGCATCAGGTGTATTCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS GCA 72 bp GCGCCCAGCCCAGCTGGACTCCTTAAAGGCGCAGCGTaGCGGTTCGCGTCCTCCGACAGAAAAGCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: APSPAGLLKGAA*RFASSDRKAAP
Trigger: CGGGGCGGCTTTTCTGTCGGAGGACGCGAACCGGCACGCTGCGCCTTTAAGGAGTCCAGCTGGGCTGGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS GCA 72 bp GCCTCGCTGTGGGCTCAGGGGCGCAAACCCTGCACGTaGACTGCCCTGCAGCCGGCGTTACACAATCCGCAT +
Preference number: 6 (lower is better)
Translates to: ASLWAQGRKPCT*TALQPALHNPH
Trigger: ATGCGGATTGTGTAACGCCGGCTGCAGGGCAGTGCACGTGCAGGGTTTGCGCCCCTGAGCCCACAGCGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS CCA 72 bp CGTCCTCACTCTGTCCCCCGGCTTCAAGAGGCTGGCTaGACCCAGGAAATGGGGCGCCGGGTTTCGGGCATC +
Preference number: 6 (lower is better)
Translates to: RPHSVPRLQEAG*TQEMGRRVSGI
Trigger: GATGCCCGAAACCCGGCGCCCCATTTCCTGGGTCCAGCCAGCCTCTTGAAGCCGGGGGACAGAGTGAGGACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS GCA 72 bp GGCTCCGGGGCGCTTATCCCCAGTTCCTCCGCGCGCTaGCTCACAGCGTTAAACCCGGAGGGTACAGTTAGC +
Preference number: 6 (lower is better)
Translates to: GSGALIPSSSAR*LTALNPEGTVS
Trigger: GCTAACTGTACCCTCCGGGTTTAACGCTGTGAGGCAGCGCGCGGAGGAACTGGGGATAAGCGCCCCGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295962.8
CDS CCA 72 bp ATTCCGTCCTCACTCTGTCCCCCGGCTTCAAGAGGCTaGCTGGACCCAGGAAATGGGGCGCCGGGTTTCGGG +
Preference number: 6 (lower is better)
Translates to: IPSSLCPPASRG*LDPGNGAPGFG
Trigger: CCCGAAACCCGGCGCCCCATTTCCTGGGTCCAGCCAGCCTCTTGAAGCCGGGGGACAGAGTGAGGACGGAAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS GCA 72 bp GGGCTCAGGGGCGCAAACCCTGCACGTGCACTGCCCTaGAGCCGGCGTTACACAATCCGCATTTCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: GLRGANPARALP*SRRYTIRISKA
Trigger: TGCCTTAGAAATGCGGATTGTGTAACGCCGGCTGCAGGGCAGTGCACGTGCAGGGTTTGCGCCCCTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS GCA 72 bp GCTGTGGGCTCAGGGGCGCAAACCCTGCACGTGCACTaGCCTGCAGCCGGCGTTACACAATCCGCATTTCTA +
Preference number: 6 (lower is better)
Translates to: AVGSGAQTLHVH*PAAGVTQSAFL
Trigger: TAGAAATGCGGATTGTGTAACGCCGGCTGCAGGGCAGTGCACGTGCAGGGTTTGCGCCCCTGAGCCCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS CCA 72 bp GCCCATCTATGGACAGGTCATCCAGGGAGGAGCGGGTaGTGCCCTCATGTCCTGGCATGTCCACGCAGACCA +
Preference number: 6 (lower is better)
Translates to: AHLWTGHPGRSG*CPHVLACPRRP
Trigger: TGGTCTGCGTGGACATGCCAGGACATGAGGGCACCACCCGCTCCTCCCTGGATGACCTGTCCATAGATGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS CCA 72 bp TCCCCCGGCTTCAAGAGGCTGGCTGGACCCAGGAAATaGGGCGCCGGGTTTCGGGCATCTCAAACCTATCCA +
Preference number: 6 (lower is better)
Translates to: SPGFKRLAGPRK*GAGFRASQTYP
Trigger: TGGATAGGTTTGAGATGCCCGAAACCCGGCGCCCCATTTCCTGGGTCCAGCCAGCCTCTTGAAGCCGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463756.5
CDS TCA 72 bp ACCACATCAAGATCCATCCTGCTCTTTCAGGCTGGCTaGCTCCTGACCAGCCTCAACCGCCTGGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: TTSRSILLFQAG*LLTSLNRLGPA
Trigger: GGCGGGACCCAGGCGGTTGAGGCTGGTCAGGAGTCAGCCAGCCTGAAAGAGCAGGATGGATCTTGATGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000475982.5
CDS TCA 72 bp GCAAGTTGCCGGCGGGTACCTGGCTGGACAGCATCCTaGTTCAAGTGTTTCGACACGGAAGGGGCGCAAGGG +
Preference number: 6 (lower is better)
Translates to: ASCRRVPGWTAS*FKCFDTEGAQG
Trigger: CCCTTGCGCCCCTTCCGTGTCGAAACACTTGAATCAGGATGCTGTCCAGCCAGGTACCCGCCGGCAACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS TCA 72 bp GCCGGCGTTACACAATCCGCATTTCTAAGGCAGCCGTaGAACCTGTGTCGCTGTAGGCGGGGGACCGCAAGT +
Preference number: 6 (lower is better)
Translates to: AGVTQSAFLRQP*NLCRCRRGTAS
Trigger: ACTTGCGGTCCCCCGCCTACAGCGACACAGGTTTCACGGCTGCCTTAGAAATGCGGATTGTGTAACGCCGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485900.1
CDS GCA 72 bp GGGGATGGGAGCAGATGCTGTGTGCAGAATGCAGGCTaGAGTCGGGGCCTCAGTCCAGCTTCTTGTTGTTGT +
Preference number: 6 (lower is better)
Translates to: GDGSRCCVQNAG*SRGLSPASCCC
Trigger: ACAACAACAAGAAGCTGGACTGAGGCCCCGACTGCAGCCTGCATTCTGCACACAGCATCTGCTCCCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 72 bp CATCGACAAGGCCTTGCAGGATCTGCTGGGGCACCTTaGAGCGGACATAGGAGCAGAGCTGAAGCATTTCAC +
Preference number: 6 (lower is better)
Translates to: HRQGLAGSAGAP*SGHRSRAEAFH
Trigger: GTGAAATGCTTCAGCTCTGCTCCTATGTCCGCTTCAAGGTGCCCCAGCAGATCCTGCAAGGCCTTGTCGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 72 bp TTTCCAGAAGCTCCACCTGGCAGTTGGCAATTGACTTaGCCAACATGTCTGCCCCAGACACATCCAGCACCT +
Preference number: 6 (lower is better)
Translates to: FPEAPPGSWQLT*PTCLPQTHPAP
Trigger: AGGTGCTGGATGTGTCTGGGGCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000470440.1
ENST00000478253.6
CDS CAA 72 bp TTTTCCAGAAGCTCCACCTGGCAGTTGGCAATTGACTaGGCCAACATGTCTGCCCCAGACACATCCAGCACC +
Preference number: 6 (lower is better)
Translates to: FSRSSTWQLAID*ANMSAPDTSST
Trigger: GGTGCTGGATGTGTCTGGGGCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CCA 72 bp ACTACTGAGTGCCCACAGTTTTCCAGAAGCTCCACCTaGCAGTTGGCAATTGACTTGGCCAACATGTCTGCC +
Preference number: 6 (lower is better)
Translates to: TTECPQFSRSST*QLAIDLANMSA
Trigger: GGCAGACATGTTGGCCAAGTCAATTGCCAACTGCCAGGTGGAGCTTCTGGAAAACTGTGGGCACTCAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS TCA 72 bp GCAGAGCCCTGCAGTTCTTTGAGCCGTTGTACAAATTaGTTGTCAGTTGAGTACTGCAGGCCAGCAGGACAC +
Preference number: 6 (lower is better)
Translates to: AEPCSSLSRCTN*LSVEYCRPAGH
Trigger: GTGTCCTGCTGGCCTGCAGTACTCAACTGACAATCAATTTGTACAACGGCTCAAAGAACTGCAGGGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
CDS TCA 72 bp CCGCCTTGGCCTCCCAAGGTGTTGAAACTACAGGTGTaGGCTACTCCACCTAGCCTCTTCCCTTCTAATATA +
Preference number: 6 (lower is better)
Translates to: PPWPPKVLKLQV*ATPPSLFPSNI
Trigger: TATATTAGAAGGGAAGAGGCTAGGTGGAGTAGCTCACACCTGTAGTTTCAACACCTTGGGAGGCCAAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480457.1
CDS CCA 72 bp ATAGGAGCAGAGCTGAAGCATTTCACTCATCTCTTCTaGGGTAGACGGGATCAAGGGAATCTTCTCCACGGC +
Preference number: 6 (lower is better)
Translates to: IGAELKHFTHLF*GRRDQGNLLHG
Trigger: GCCGTGGAGAAGATTCCCTTGATCCCGTCTACCCCAGAAGAGATGAGTGAAATGCTTCAGCTCTGCTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
CDS CAA 72 bp GAATGCAGGCTGCAGTCGGGGCCTCAGTCCAGCTTCTaGTTGTTGTCTGTGTTGTGCACAGAAGCTAAAAAG +
Preference number: 6 (lower is better)
Translates to: ECRLQSGPQSSF*LLSVLCTEAKK
Trigger: CTTTTTAGCTTCTGTGCACAACACAGACAACAACAAGAAGCTGGACTGAGGCCCCGACTGCAGCCTGCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CAA 90 bp CTGTGTGCAGAATGCAGGCTGCAGTCGGGGCCTCAGTCCAGCTTCTaGTTGTTGTCTGTGTTGTGCACAGAAGCTAAAAAGTCGATTATG +
Preference number: 6 (lower is better)
Translates to: LCAECRLQSGPQSSF*LLSVLCTEAKKSIM
Trigger: CATAATCGACTTTTTAGCTTCTGTGCACAACACAGACAACAACAAGAAGCTGGACTGAGGCCCCGACTGCAGCCTGCATTCTGCACACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS GCA 72 bp TTCAGGCATTCTACAAACTGGTGTATCCTCTTAACTTaGCCATCTATGGACAGGTCATCCAGGGAGGAGCGG +
Preference number: 6 (lower is better)
Translates to: FRHSTNWCILLT*PSMDRSSREER
Trigger: CCGCTCCTCCCTGGATGACCTGTCCATAGATGGGCAAGTTAAGAGGATACACCAGTTTGTAGAATGCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS CCA 72 bp CACTTGTCAGAAAAGGAAAACAAAGTGAGTATGTGCTaGACTGTGCCTGTGGCACCACCGCAGAATCAAGGG +
Preference number: 6 (lower is better)
Translates to: HLSEKENKVSMC*TVPVAPPQNQG
Trigger: CCCTTGATTCTGCGGTGGTGCCACAGGCACAGTCCAGCACATACTCACTTTGTTTTCCTTTTCTGACAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470440.1
CDS CAA 72 bp CTTCAGGCATTCTACAAACTGGTGTATCCTCTTAACTaGCCCATCTATGGACAGGTCATCCAGGGAGGAGCG +
Preference number: 6 (lower is better)
Translates to: LQAFYKLVYPLN*PIYGQVIQGGA
Trigger: CGCTCCTCCCTGGATGACCTGTCCATAGATGGGCAAGTTAAGAGGATACACCAGTTTGTAGAATGCCTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS CAA 72 bp CCACCCATGGAGGTGCCTACCAGGTGGAAAGGTTTTTaGTTCAGCTTCAGGCATTCTACAAACTGGTGTATC +
Preference number: 6 (lower is better)
Translates to: PPMEVPTRWKGF*FSFRHSTNWCI
Trigger: GATACACCAGTTTGTAGAATGCCTGAAGCTGAACAAAAAACCTTTCCACCTGGTAGGCACCTCCATGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS CAA 90 bp AGGTGTGAGCTACTCCACCTAGCCTCTTCCCTTCTAATATACGTATaGAAGCCTATGAATTTCCCTCTGAGGCACTGCTTTAGCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RCELLHLASSLLIYV*KPMNFPLRHCFSCS
Trigger: GCTGCAGCTAAAGCAGTGCCTCAGAGGGAAATTCATAGGCTTCAATACGTATATTAGAAGGGAAGAGGCTAGGTGGAGTAGCTCACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480457.1
CDS CAA 90 bp TTGTTGTCTGTGTTGTGCACAGAAGCTAAAAAGTCGATTATGAGCTaGGCTGTCTTCCTGGGTCTTTCCATCACTACTGAGTGCCCACAG +
Preference number: 6 (lower is better)
Translates to: LLSVLCTEAKKSIMS*AVFLGLSITTECPQ
Trigger: CTGTGGGCACTCAGTAGTGATGGAAAGACCCAGGAAGACAGCCAAGCTCATAATCGACTTTTTAGCTTCTGTGCACAACACAGACAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS GCA 72 bp CTCAGCTCAGGGCTGCTACATCTTTCACGCTGCTCATaGAATAATAGATTCTTATCAGTGCTGAAGGCCACA +
Preference number: 6 (lower is better)
Translates to: LSSGLLHLSRCS*NNRFLSVLKAT
Trigger: TGTGGCCTTCAGCACTGATAAGAATCTATTATTGCATGAGCAGCGTGAAAGATGTAGCAGCCCTGAGCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS TCA 72 bp ATGATCTGCGTCGGAACCTTGATCTTGTCCATGTTCTaGTGGAGAGAGTATCTGGACTTCTCACTGACGATT +
Preference number: 6 (lower is better)
Translates to: MICVGTLILSMF*WREYLDFSLTI
Trigger: AATCGTCAGTGAGAAGTCCAGATACTCTCTCCATCAGAACATGGACAAGATCAAGGTTCCGACGCAGATCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295962.8
ENST00000470440.1
ENST00000478253.6
CDS GCA 72 bp ACTGATAGTCTTCATGGTGAACATAGCGGACTTGCATaGCCAATGTCCTCCGCCAGTACCAATAATAGATTC +
Preference number: 6 (lower is better)
Translates to: TDSLHGEHSGLA*PMSSASTNNRF
Trigger: GAATCTATTATTGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS GCA 72 bp GAAAGGCTCAGCTCAGGGCTGCTACATCTTTCACGCTaGTCATGCAATAATAGATTCTTATCAGTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: ERLSSGLLHLSR*SCNNRFLSVLK
Trigger: CTTCAGCACTGATAAGAATCTATTATTGCATGAGCAGCGTGAAAGATGTAGCAGCCCTGAGCTGAGCCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS GCA 72 bp TCTGATTCCAACAAGGAGAAAGGCTCAGCTCAGGGCTaGTACATCTTTCACGCTGCTCATGCAATAATAGAT +
Preference number: 6 (lower is better)
Translates to: SDSNKEKGSAQG*YIFHAAHAIID
Trigger: ATCTATTATTGCATGAGCAGCGTGAAAGATGTAGCAGCCCTGAGCTGAGCCTTTCTCCTTGTTGGAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475982.5
CDS CAA 72 bp ACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCGCCAGTACCAATAATA +
Preference number: 6 (lower is better)
Translates to: TELIVFMVNIAD*HAQCPPPVPII
Trigger: TATTATTGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1
CDS CAA 72 bp GTGTTGTGCACAGAAGCTAAAAAGTCGATTATGAGCTaGGCTGTCTTCCTGGGTCTTTCCATCACTACTGAG +
Preference number: 6 (lower is better)
Translates to: VLCTEAKKSIMS*AVFLGLSITTE
Trigger: CTCAGTAGTGATGGAAAGACCCAGGAAGACAGCCAAGCTCATAATCGACTTTTTAGCTTCTGTGCACAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295962.8
ENST00000478253.6
CDS CAA 72 bp CTACTCCACCTAGCCTCTTCCCTTCTAATATACGTATaGAAGCCTATGAATTTCCCTCTGAGGCACTGCTTT +
Preference number: 6 (lower is better)
Translates to: LLHLASSLLIYV*KPMNFPLRHCF
Trigger: AAAGCAGTGCCTCAGAGGGAAATTCATAGGCTTCAATACGTATATTAGAAGGGAAGAGGCTAGGTGGAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480457.1
CDS CAA 90 bp GAAGGAATAACAGAACTGATAGTCTTCATGGTGAACATAGCGGACTaGCATGCCCAATGTCCTCCGCCAGTACCAATAATAGATTCTTAT +
Preference number: 6 (lower is better)
Translates to: EGITELIVFMVNIAD*HAQCPPPVPIIDSY
Trigger: ATAAGAATCTATTATTGGTACTGGCGGAGGACATTGGGCATGCAAGTCCGCTATGTTCACCATGAAGACTATCAGTTCTGTTATTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295962.8
ENST00000463756.5
ENST00000478253.6
ENST00000485900.1