Pregenerated sensors for ABHD17A (Homo sapiens)
Ensembl gene IDs: ENSG00000129968Ensembl transcript IDs: ENST00000250974.9, ENST00000292577.12, ENST00000588598.5, ENST00000591351.5, ENST00000676686.1, ENST00000677868.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTCAGGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTaGGCGCTCGAGAGAGTGAGCAGAGCCATGAAAGGAAGGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TQGRNLGTPAPFRAR*ALERVSRAMKGRRA Trigger: TGCTCTCCTTCCTTTCATGGCTCTGCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| 3UTR TCA 72 bp | CGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTaGGCGCTCGAGAGAGTGAGCAGAGCCATGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: RNLGTPAPFRAR*ALERVSRAMKG Trigger: TCCTTTCATGGCTCTGCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR TCA 90 bp | CTCAGGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGCCCTTTCGAGCTCGCTaGGCGCTCGAGAGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LRDETWEPRPPFELAERSPFRAR*ALERVS Trigger: GCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGG...CGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR CCA 90 bp | GGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGAGAGCTCAGGGACGAAACCTaGGAACCCCGGCCCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: GTKPGNPGPLSSSLSARELRDET*EPRPPF Trigger: GAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG...CTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR CCA 90 bp | CTCAGGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGCTCAGGGACGAAACCTaGGAACCCCGGCCCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LRDETWEPRPPFELAERSLRDET*EPRPPF Trigger: GAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG...CGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR TCA 90 bp | CCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGAGAGAGTGAGCAGAGCCATGAACCCTTTCGAGCTCGCTaGGCGCTCGAGAGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PGPLSSSLSARESEQSHEPFRAR*ALERVS Trigger: GCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGG...TTCATGGCTCTGCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR CCA 90 bp | CCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGAGAGAGTGAGCAGAGCCATGAACTCCATGTCGTGCCGTaGGAAGCCTGGGCAACCCTC | + |
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Preference number: 4 (lower is better) Translates to: PGPLSSSLSARESEQSHELHVVP*EAWATL Trigger: GAGGGTTGCCCAGGCTTCCCACGGCACGACATGGAG...TTCATGGCTCTGCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS-3UTR GCA 90 bp | CCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGAGAGAGTGAGCAGAGCCATGAAAGAGGACCGTGTACATaGAGGAGACGCGGTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PGPLSSSLSARESEQSHERGPCT*RRRGCR Trigger: GCGGCAACCGCGTCTCCTGCATGTACACGGTCCTCT...TTCATGGCTCTGCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677868.1 |
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| CDS-3UTR CCA 90 bp | CTCAGGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGGAGCAGCCAAAATACTaGAAGATGACCACCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRDETWEPRPPFELAERSEQPKY*KMTTPA Trigger: GGCCGGGGTGGTCATCTTCCAGTATTTTGGCTGCTC...CGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS-3UTR TCA 90 bp | CTCAGGGACGAAACCTGGGAACCCCGGCCCCCTTTCGAGCTCGCTGAGCGCTCGAAGCTAGAGGTGTTCTaGGGACCAGCAAGCAACCGA | + |
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Preference number: 4 (lower is better) Translates to: LRDETWEPRPPFELAERSKLEVF*GPASNR Trigger: TCGGTTGCTTGCTGGTCCTCAGAACACCTCTAGCTT...CGAGCGCTCAGCGAGCTCGAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS-3UTR CCA 90 bp | ATAAGGGGGTCCGTGCCGATCTCTCCTAGGGACTCAGGGACGAAACCTGGGAACCTCAGGGACGAAACCTaGGAACCCCGGCCCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: IRGSVPISPRDSGTKPGNLRDET*EPRPPF Trigger: GAAAGGGGGCCGGGGTTCCCAGGTTTCGTCCCTGAG...GTTCCCAGGTTTCGTCCCTGAGTCCCTAGGAGAGATCGGCACGGACCCCCTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR TCA 90 bp | TTCCGCAGAGTAAAACCTATAAGGGGGTCCGTGCCGATCTCTCCTAGGGACTCACCCTTTCGAGCTCGCTaGGCGCTCGAGAGAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FRRVKPIRGSVPISPRDSPFRAR*ALERVS Trigger: GCTCACTCTCTCGAGCGCTCAGCGAGCTCGAAAGGG...TGAGTCCCTAGGAGAGATCGGCACGGACCCCCTTATAGGTTTTACTCTGCGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000292577.12 ENST00000676686.1 ENST00000677868.1 |
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| CDS-3UTR TCA 90 bp | TTCCGCAGAGTAAAACCTATAAGGGGGTCCGTGCCGATCTCTCCTAGGGACTCACAAAATACTGGAAGATaGCCACCCCGGCCCGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: FRRVKPIRGSVPISPRDSQNTGR*PPRPAP Trigger: GGGCGCGGGCCGGGGTGGTCATCTTCCAGTATTTTG...TGAGTCCCTAGGAGAGATCGGCACGGACCCCCTTATAGGTTTTACTCTGCGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS-3UTR CCA 90 bp | TTCCGCAGAGTAAAACCTATAAGGGGGTCCGTGCCGATCTCTCCTAGGGACTCAGTGCCGTGGGAAGCCTaGGCAACCCTCTGCAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: FRRVKPIRGSVPISPRDSVPWEA*ATLCKL Trigger: TAGCTTGCAGAGGGTTGCCCAGGCTTCCCACGGCAC...TGAGTCCCTAGGAGAGATCGGCACGGACCCCCTTATAGGTTTTACTCTGCGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS GCA 90 bp | CCAGCAGGCAACCACCAGGCGCTGGGTTGTTGGAGTCGCCCAGCCTaGCCACCCATGCCAGCTGGGGATGGCCTCCCTGAGCCTGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PAGNHQALGCWSRPA*PPMPAGDGLPEPGV Trigger: GACACCAGGCTCAGGGAGGCCATCCCCAGCTGGCATGGGTGGGCAGGCTGGGCGACTCCAACAACCCAGCGCCTGGTGGTTGCCTGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250974.9 |
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| CDS GCA 90 bp | GCTCCAGCACCAGGGAAACCCCATGCGCCAGGACTCGGTCCGCACTaGTGCCCACTCCCTCCCCCGGCCCATCTCTGCCACCCTATGGGT | + |
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Preference number: 5 (lower is better) Translates to: APAPGKPHAPGLGPH*CPLPPPAHLCHPMG Trigger: ACCCATAGGGTGGCAGAGATGGGCCGGGGGAGGGAGTGGGCAGCAGTGCGGACCGAGTCCTGGCGCATGGGGTTTCCCTGGTGCTGGAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | TCCCTCCCCCGGCCCATCTCTGCCACCCTATGGGTGACGGGCCGCTaGGGCAAGGACAGAGCTCGAACTGAAGGGACCCACGAGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: SLPRPISATLWVTGR*GKDRARTEGTHEGP Trigger: GGGTCCCTCGTGGGTCCCTTCAGTTCGAGCTCTGTCCTTGCCTCAGCGGCCCGTCACCCATAGGGTGGCAGAGATGGGCCGGGGGAGGGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | CTGCTGCCCACTCCCTCCCCCGGCCCATCTCTGCCACCCTATGGGTaGCGGGCCGCTGAGGCAAGGACAGAGCTCGAACTGAAGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: LLPTPSPGPSLPPYG*RAAEARTELELKGP Trigger: GGGTCCCTTCAGTTCGAGCTCTGTCCTTGCCTCAGCGGCCCGTCACCCATAGGGTGGCAGAGATGGGCCGGGGGAGGGAGTGGGCAGCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | ACTTGGAGGGCCCTGCAGTTTAGGTGGCATCATGCAGCTGGGTCCTaGGAGCCCAGTGGACAGCAGCAGGCCCCTGGAGACCCCGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: TWRALQFRWHHAAGS*EPSGQQQAPGDPGD Trigger: GTCTCCGGGGTCTCCAGGGGCCTGCTGCTGTCCACTGGGCTCTCAGGACCCAGCTGCATGATGCCACCTAAACTGCAGGGCCCTCCAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | TGTGAGCCGGACTCATGGGCACACGAGGAGGAGAGGAGAGAGCTCTaGAAGCCAGGGTGGGGCAAGGATGGCATCCCAGTGCCCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: CEPDSWAHEEERREL*KPGWGKDGIPVPPD Trigger: GTCTGGGGGCACTGGGATGCCATCCTTGCCCCACCCTGGCTTTCAGAGCTCTCTCCTCTCCTCCTCGTGTGCCCATGAGTCCGGCTCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 90 bp | CGAGGAGGAGAGGAGAGAGCTCTGAAAGCCAGGGTGGGGCAAGGATaGCATCCCAGTGCCCCCAGACTCCCAGGCGGAAGGCAAATCGCA | + |
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Preference number: 5 (lower is better) Translates to: RGGEERALKARVGQG*HPSAPRLPGGRQIA Trigger: TGCGATTTGCCTTCCGCCTGGGAGTCTGGGGGCACTGGGATGCCATCCTTGCCCCACCCTGGCTTTCAGAGCTCTCTCCTCTCCTCCTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 90 bp | CGTGGGGCCAGGAAGATGAGGCTCAAAGGCAGATGTGGACACAGATaGACATGCAGGCAGCTGCAGGCGCCACAGACACGGCTCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RGARKMRLKGRCGHR*TCRQLQAPQTRLVG Trigger: CCCCACGAGCCGTGTCTGTGGCGCCTGCAGCTGCCTGCATGTCCATCTGTGTCCACATCTGCCTTTGAGCCTCATCTTCCTGGCCCCACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | GCAGCCTCAGGCCCAGAAACACACCTGCTCCCTCAGGACCTGATGTaGGACCCACGTTCCTGTGAGCCGGACTCATGGGCACACGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: AASGPETHLLPQDLM*DPRSCEPDSWAHEE Trigger: CTCCTCGTGTGCCCATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGTCCTGAGGGAGCAGGTGTGTTTCTGGGCCTGAGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS GCA 90 bp | GGAGAGAGCTCTGAAAGCCAGGGTGGGGCAAGGATGGCATCCCAGTaGCCCCAGACTCCCAGGCGGAAGGCAAATCGCACATGCAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: GESSESQGGARMASQ*PQTPRRKANRTCKH Trigger: GTGCTTGCATGTGCGATTTGCCTTCCGCCTGGGAGTCTGGGGGCACTGGGATGCCATCCTTGCCCCACCCTGGCTTTCAGAGCTCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 90 bp | ATTCTCAAAGAGGTCCAGGCCCTACCGGTGCTGCCCCGCTGGTGCTaGGGACTTGGAGGGCCCTGCAGTTTAGGTGGCATCATGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ILKEVQALPVLPRWC*GLGGPCSLGGIMQL Trigger: CAGCTGCATGATGCCACCTAAACTGCAGGGCCCTCCAAGTCCCCAGCACCAGCGGGGCAGCACCGGTAGGGCCTGGACCTCTTTGAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | AAGGAGCAGCCTCAGGCCCAGAAACACACCTGCTCCCTCAGGACCTaGTGTGAGACCCACGTTCCTGTGAGCCGGACTCATGGGCACACG | + |
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Preference number: 5 (lower is better) Translates to: KEQPQAQKHTCSLRT*CETHVPVSRTHGHT Trigger: CGTGTGCCCATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGTCCTGAGGGAGCAGGTGTGTTTCTGGGCCTGAGGCTGCTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | AACACACCTGCTCCCTCAGGACCTGATGTGAGACCCACGTTCCTGTaGGCCGGACTCATGGGCACACGAGGAGGAGAGGAGAGAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: NTPAPSGPDVRPTFL*AGLMGTRGGEERAL Trigger: CAGAGCTCTCTCCTCTCCTCCTCGTGTGCCCATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGTCCTGAGGGAGCAGGTGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 90 bp | AGGCGGAAGGCAAATCGCACATGCAAGCACTTTTCAGCCGGGAGGTaGACTGTCAGGCTGGTTCTGCTTCTCAGATGGAGGCGAGTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRKANRTCKHFSAGR*TVRLVLLLRWRRVS Trigger: GGAGACTCGCCTCCATCTGAGAAGCAGAACCAGCCTGACAGTCCACCTCCCGGCTGAAAAGTGCTTGCATGTGCGATTTGCCTTCCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | TGGCCAGGGCCCCACTATCCAGGCCAGAAACAAAGATGTTATCCTTaGCACCTCCTTCCACCCACTGGATCTGAGCCGGTCCATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: WPGPHYPGQKQRCYP*HLLPPTGSEPVHHQ Trigger: CTGGTGATGGACCGGCTCAGATCCAGTGGGTGGAAGGAGGTGTCAAGGATAACATCTTTGTTTCTGGCCTGGATAGTGGGGCCCTGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000591351.5 |
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| CDS TCA 90 bp | GTGCCGTGGGAAGCCTGGGCAACCCTCTGCAAGCTAGAGGTGTTCTaGGGACCAGCAAGCAACCGAGCAGCCAAAATACTGGAAGATGAC | + |
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Preference number: 5 (lower is better) Translates to: VPWEAWATLCKLEVF*GPASNRAAKILEDD Trigger: GTCATCTTCCAGTATTTTGGCTGCTCGGTTGCTTGCTGGTCCTCAGAACACCTCTAGCTTGCAGAGGGTTGCCCAGGCTTCCCACGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS CCA 90 bp | ACACCCTGGAATGCTTGGCTTTTGGGTCACAGCATGAGAAAACCGTaGGGCCAGGAAGATGAGGCTCAAAGGCAGATGTGGACACAGATG | + |
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Preference number: 5 (lower is better) Translates to: TPWNAWLLGHSMRKP*GQEDEAQRQMWTQM Trigger: CATCTGTGTCCACATCTGCCTTTGAGCCTCATCTTCCTGGCCCCACGGTTTTCTCATGCTGTGACCCAAAAGCCAAGCATTCCAGGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | TGTAAGGACCTGCCAACAGACAGACGTGAAGAAAACACGAAGGTCTaGGACGTCTATCTACCGACCACGCTTCTCCTTCAGACTGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: CKDLPTDRREENTKV*DVYLPTTLLLQTGA Trigger: CGCTCCAGTCTGAAGGAGAAGCGTGGTCGGTAGATAGACGTCTCAGACCTTCGTGTTTTCTTCACGTCTGTCTGTTGGCAGGTCCTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 90 bp | GAAGGTCTGAGACGTCTATCTACCGACCACGCTTCTCCTTCAGACTaGAGCGAGGAGAGAGACACGCTCACAACTCAATTTCAGCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: EGLRRLSTDHASPSD*SEERDTLTTQFQQN Trigger: GTTCTGCTGAAATTGAGTTGTGAGCGTGTCTCTCTCCTCGCTCCAGTCTGAAGGAGAAGCGTGGTCGGTAGATAGACGTCTCAGACCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 90 bp | CCCACCCCAAAGAATGATCAGGCCCAACATCCACAGCGTCGAGGTTaGTGTCAGCTTTTCAACATATTCTCAAAGAGGTCCAGGCCCTAC | + |
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Preference number: 5 (lower is better) Translates to: PTPKNDQAQHPQRRG*CQLFNIFSKRSRPY Trigger: GTAGGGCCTGGACCTCTTTGAGAATATGTTGAAAAGCTGACATCAACCTCGACGCTGTGGATGTTGGGCCTGATCATTCTTTGGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | AGGGACCCACGAGGGACCCGAACAGGCCCCGCTACGTaGGCGTGCACAGGCGCCGGGTCCCACCGGCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RDPRGTRTGPAT*ACTGAGSHRPA Trigger: CGCAGGCCGGTGGGACCCGGCGCCTGTGCACGCTCACGTAGCGGGGCCTGTTCGGGTCCCTCGTGGGTCCCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | AGCCTGCCCACCCATGCCAGCTGGGGATGGCCTCCCTaGGCCTGGTGTCCTTGTCTGGCACCAGGCACGCAG | + |
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Preference number: 6 (lower is better) Translates to: SLPTHASWGWPP*AWCPCLAPGTQ Trigger: CTGCGTGCCTGGTGCCAGACAAGGACACCAGGCTCAGGGAGGCCATCCCCAGCTGGCATGGGTGGGCAGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000250974.9 |
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| CDS TCA 72 bp | GGTGACGGGCCGCTGAGGCAAGGACAGAGCTCGAACTaGAGGGACCCACGAGGGACCCGAACAGGCCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: GDGPLRQGQSSN*RDPRGTRTGPA Trigger: AGCGGGGCCTGTTCGGGTCCCTCGTGGGTCCCTTCAGTTCGAGCTCTGTCCTTGCCTCAGCGGCCCGTCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | CATGCAGGCAGCTGCAGGCGCCACAGACACGGCTCGTaGGGACACCCTCACTACCAAGGAGCAGCCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: HAGSCRRHRHGS*GHPHYQGAASG Trigger: GCCTGAGGCTGCTCCTTGGTAGTGAGGGTGTCCCCACGAGCCGTGTCTGTGGCGCCTGCAGCTGCCTGCATG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | CGGCCCATCTCTGCCACCCTATGGGTGACGGGCCGCTaGGGCAAGGACAGAGCTCGAACTGAAGGGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: RPISATLWVTGR*GKDRARTEGTH Trigger: GTGGGTCCCTTCAGTTCGAGCTCTGTCCTTGCCTCAGCGGCCCGTCACCCATAGGGTGGCAGAGATGGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | GCCCTGCAGTTTAGGTGGCATCATGCAGCTGGGTCCTaGGAGCCCAGTGGACAGCAGCAGGCCCCTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: ALQFRWHHAAGS*EPSGQQQAPGD Trigger: GTCTCCAGGGGCCTGCTGCTGTCCACTGGGCTCTCAGGACCCAGCTGCATGATGCCACCTAAACTGCAGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS GCA 72 bp | GCTCTGCCTGTCTCCCATCAGCCACCGCCCGGTCCCTaGCTCCATCACCTTTCACCAGAGCCACAGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: ALPVSHQPPPGP*LHHLSPEPQQQ Trigger: CTGTTGCTGTGGCTCTGGTGAAAGGTGATGGAGGCAGGGACCGGGCGGTGGCTGATGGGAGACAGGCAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000591351.5 |
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| CDS GCA 72 bp | TCTGAAAGCCAGGGTGGGGCAAGGATGGCATCCCAGTaGCCCCAGACTCCCAGGCGGAAGGCAAATCGCACA | + |
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Preference number: 6 (lower is better) Translates to: SESQGGARMASQ*PQTPRRKANRT Trigger: TGTGCGATTTGCCTTCCGCCTGGGAGTCTGGGGGCACTGGGATGCCATCCTTGCCCCACCCTGGCTTTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | GACTCATGGGCACACGAGGAGGAGAGGAGAGAGCTCTaGAAGCCAGGGTGGGGCAAGGATGGCATCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: DSWAHEEERREL*KPGWGKDGIPV Trigger: CACTGGGATGCCATCCTTGCCCCACCCTGGCTTTCAGAGCTCTCTCCTCTCCTCCTCGTGTGCCCATGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | GGCCCAGAAACACACCTGCTCCCTCAGGACCTGATGTaGGACCCACGTTCCTGTGAGCCGGACTCATGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GPETHLLPQDLM*DPRSCEPDSWA Trigger: TGCCCATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGTCCTGAGGGAGCAGGTGTGTTTCTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | CCTTCCCTGAGCTGGCGATCACCACCTCTTGCCATGTaGGTACAGCCATGGCATGCGGGGCATGCAGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: PSLSWRSPPLAM*VQPWHAGHAGD Trigger: ATCCCCTGCATGCCCCGCATGCCATGGCTGTACTCACATGGCAAGAGGTGGTGATCGCCAGCTCAGGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS GCA 72 bp | TTCAACATATTCTCAAAGAGGTCCAGGCCCTACCGGTaGTGCCCCGCTGGTGCTGGGGACTTGGAGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: FNIFSKRSRPYR*CPAGAGDLEGP Trigger: AGGGCCCTCCAAGTCCCCAGCACCAGCGGGGCAGCACCGGTAGGGCCTGGACCTCTTTGAGAATATGTTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | CCTCAGGCCCAGAAACACACCTGCTCCCTCAGGACCTaGTGTGAGACCCACGTTCCTGTGAGCCGGACTCAT | + |
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Preference number: 6 (lower is better) Translates to: PQAQKHTCSLRT*CETHVPVSRTH Trigger: ATGAGTCCGGCTCACAGGAACGTGGGTCTCACATCAGGTCCTGAGGGAGCAGGTGTGTTTCTGGGCCTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | AGGAAGATGAGGCTCAAAGGCAGATGTGGACACAGATaGACATGCAGGCAGCTGCAGGCGCCACAGACACGG | + |
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Preference number: 6 (lower is better) Translates to: RKMRLKGRCGHR*TCRQLQAPQTR Trigger: CCGTGTCTGTGGCGCCTGCAGCTGCCTGCATGTCCATCTGTGTCCACATCTGCCTTTGAGCCTCATCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CAA 72 bp | CCTCCTGGAGACACCTGTCAATGTCTGGACACAGTTTaGGGTGTCACCACTGGGGACTGGGTGGAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PPGDTCQCLDTV*GVTTGDWVEAA Trigger: AGCAGCCTCCACCCAGTCCCCAGTGGTGACACCCAAAACTGTGTCCAGACATTGACAGGTGTCTCCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | CTGTCAATGTCTGGACACAGTTTTGGGTGTCACCACTaGGGACTGGGTGGAGGCTGCTTAGCACCCTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSMSGHSFGCHH*GLGGGCLAPCS Trigger: ACTGCAGGGTGCTAAGCAGCCTCCACCCAGTCCCCAGTGGTGACACCCAAAACTGTGTCCAGACATTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | GAAGCCTGGGCAACCCTCTGCAAGCTAGAGGTGTTCTaGGGACCAGCAAGCAACCGAGCAGCCAAAATACTG | + |
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Preference number: 6 (lower is better) Translates to: EAWATLCKLEVF*GPASNRAAKIL Trigger: CAGTATTTTGGCTGCTCGGTTGCTTGCTGGTCCTCAGAACACCTCTAGCTTGCAGAGGGTTGCCCAGGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676686.1 |
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| CDS CCA 72 bp | GCAAATCGCACATGCAAGCACTTTTCAGCCGGGAGGTaGACTGTCAGGCTGGTTCTGCTTCTCAGATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ANRTCKHFSAGR*TVRLVLLLRWR Trigger: CCTCCATCTGAGAAGCAGAACCAGCCTGACAGTCCACCTCCCGGCTGAAAAGTGCTTGCATGTGCGATTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | GGGTCACAGCATGAGAAAACCGTGGGGCCAGGAAGATaGGGCTCAAAGGCAGATGTGGACACAGATGGACAT | + |
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Preference number: 6 (lower is better) Translates to: GSQHEKTVGPGR*GSKADVDTDGH Trigger: ATGTCCATCTGTGTCCACATCTGCCTTTGAGCCTCATCTTCCTGGCCCCACGGTTTTCTCATGCTGTGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | TGGTTCTGCTTCTCAGATGGAGGCGAGTCTCCCTCCTaGAGACACCTGTCAATGTCTGGACACAGTTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: WFCFSDGGESPS*RHLSMSGHSFG Trigger: CCCAAAACTGTGTCCAGACATTGACAGGTGTCTCCAGGAGGGAGACTCGCCTCCATCTGAGAAGCAGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | AATGCTTGGCTTTTGGGTCACAGCATGAGAAAACCGTaGGGCCAGGAAGATGAGGCTCAAAGGCAGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: NAWLLGHSMRKP*GQEDEAQRQMW Trigger: CCACATCTGCCTTTGAGCCTCATCTTCCTGGCCCCACGGTTTTCTCATGCTGTGACCCAAAAGCCAAGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | CTGCCAACAGACAGACGTGAAGAAAACACGAAGGTCTaGGACGTCTATCTACCGACCACGCTTCTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LPTDRREENTKV*DVYLPTTLLLQ Trigger: CTGAAGGAGAAGCGTGGTCGGTAGATAGACGTCTCAGACCTTCGTGTTTTCTTCACGTCTGTCTGTTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | AGACGTCTATCTACCGACCACGCTTCTCCTTCAGACTaGAGCGAGGAGAGAGACACGCTCACAACTCAATTT | + |
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Preference number: 6 (lower is better) Translates to: RRLSTDHASPSD*SEERDTLTTQF Trigger: AAATTGAGTTGTGAGCGTGTCTCTCTCCTCGCTCCAGTCTGAAGGAGAAGCGTGGTCGGTAGATAGACGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CAA 72 bp | CTCAATTTCAGCAGAACACCCTGGAATGCTTGGCTTTaGGGTCACAGCATGAGAAAACCGTGGGGCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LNFSRTPWNAWL*GHSMRKPWGQE Trigger: TTCCTGGCCCCACGGTTTTCTCATGCTGTGACCCAAAAGCCAAGCATTCCAGGGTGTTCTGCTGAAATTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS CCA 72 bp | GAGACACGCTCACAACTCAATTTCAGCAGAACACCCTaGAATGCTTGGCTTTTGGGTCACAGCATGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ETRSQLNFSRTP*NAWLLGHSMRK Trigger: TTTTCTCATGCTGTGACCCAAAAGCCAAGCATTCCAGGGTGTTCTGCTGAAATTGAGTTGTGAGCGTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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| CDS TCA 72 bp | AAGAATGATCAGGCCCAACATCCACAGCGTCGAGGTTaGTGTCAGCTTTTCAACATATTCTCAAAGAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: KNDQAQHPQRRG*CQLFNIFSKRS Trigger: GGACCTCTTTGAGAATATGTTGAAAAGCTGACATCAACCTCGACGCTGTGGATGTTGGGCCTGATCATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000588598.5 ENST00000591351.5 |
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