Pregenerated sensors for ABHD13 (Homo sapiens)
Ensembl gene IDs: ENSG00000139826Ensembl transcript IDs: ENST00000375898.4
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTaGCTCCTGAAGAAGTCTCATTTTACTAAAACCAATTGCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: HILPFPLSNGSTVKE*LLKKSHFTKTNCFG Trigger: GCCAAAGCAATTGGTTTTAGTAAAATGAGACTTCTTCAGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR CCA 90 bp | TTAATACACAAGATAGATACATATACTTCCATTCCCACTAAGCAATaGGTCCACAGTAAAGGAGTGACTCCTGAAGAAGTCTCATTTTAC | + |
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Preference number: 1 (lower is better) Translates to: LIHKIDTYTSIPTKQ*VHSKGVTPEEVSFY Trigger: GTAAAATGAGACTTCTTCAGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGTATCTATCTTGTGTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATCAAAAATGATGCCATaGGCTTCATGGACCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: CDILFTSLPYLSLSSRRKSKMMP*ASWTPD Trigger: ATCAGGGGTCCATGAAGCCCATGGCATCATTTTTGA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAATTTTTGAGGACTGCATaGAACAACTTGGCACAATTA | + |
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Preference number: 2 (lower is better) Translates to: EGRERQTSTLQFLKSWLKFLRTA*NNLAQL Trigger: TAATTGTGCCAAGTTGTTTCATGCAGTCCTCAAAAA...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR GCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAACTAATTTTTGAGGACTaGATGAAACAACTTGGCACA | + |
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Preference number: 2 (lower is better) Translates to: EGRERQTSTLQFLKSWLKLIFED*MKQLGT Trigger: TGTGCCAAGTTGTTTCATGCAGTCCTCAAAAATTAG...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATGTTGCAATGGCAAGTaGTCCAGTCACTTTTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: CDILFTSLPYLSLSSRRKCCNGK*SSHFLL Trigger: TAACAAAAAGTGACTGGAGCACTTGCCATTGCAACA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR CAA 90 bp | TCTAGCCCTATCTCCATTGAAAGTTTTAAATTAAGGTCAAGATTATaGACCCATTACTTCTCTGTTCTAGTTGCTTGCAGAAAGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: SSPISIESFKLRSRL*THYFSVLVACRKPL Trigger: TAGTGGCTTTCTGCAAGCAACTAGAACAGAGAAGTAATGGGTCAATAATCTTGACCTTAATTTAAAACTTTCAATGGAGATAGGGCTAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR TCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAAAAGCATCAGATGGTATaGATTCTCAACAGGTATTAC | + |
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Preference number: 2 (lower is better) Translates to: CDILFTSLPYLSLSSRRKKHQMV*ILNRYY Trigger: GTAATACCTGTTGAGAATTCATACCATCTGATGCTT...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATTTGTAAGAAAAAGCTaGATCTCAGCATTCACCAGA | + |
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Preference number: 2 (lower is better) Translates to: CDILFTSLPYLSLSSRRKFVRKS*ISAFTR Trigger: TCTGGTGAATGCTGAGATCCAGCTTTTTCTTACAAA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAAAGTCAAAAACCTAATTaGAAAAACAGGGTTGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: CDILFTSLPYLSLSSRRKSQKPN*KNRVVA Trigger: TGCAACAACCCTGTTTTTGCAATTAGGTTTTTGACT...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR CAA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTCACGGTACATTTGTATaGGAAAACAGGGTCCCATTT | + |
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Preference number: 3 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPHGTFV*ENRVPF Trigger: AAATGGGACCCTGTTTTCCAATACAAATGTACCGTG...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR CCA 72 bp | AAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATaGCAACCTGCACATAAGTCTCAATTTCACTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: KLDLSIHQSKIQ*QPAHKSQFHFL Trigger: CAAGAAGTGAAATTGAGACTTATGTGCAGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR CCA 72 bp | AAGATAGATACATATACTTCCATTCCCACTAAGCAATaGGTCCACAGTAAAGGAGTGACTCCTGAAGAAGTC | + |
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Preference number: 3 (lower is better) Translates to: KIDTYTSIPTKQ*VHSKGVTPEEV Trigger: GACTTCTTCAGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGTATCTATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR CAA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTGTTACAGAACTAAGTTaGCTTACCATGATTGTCCCA | + |
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Preference number: 3 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPVTELS*LTMIVP Trigger: TGGGACAATCATGGTAAGCAAACTTAGTTCTGTAAC...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR-3UTR CAA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAAAAAAACACGGTACATTaGTATTGGAAAACAGGGTCC | + |
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Preference number: 3 (lower is better) Translates to: CDILFTSLPYLSLSSRRKKNTVH*YWKTGS Trigger: GGACCCTGTTTTCCAATACAAATGTACCGTGTTTTT...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 38% GC, longest homopolymer 9 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR GCA 72 bp | TTACACAAAGCTCAATTACATCTAATTTTTGAGGACTaGATGAAACAACTTGGCACAATTATGACTCATAGC | + |
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Preference number: 3 (lower is better) Translates to: LHKAQLHLIFED*MKQLGTIMTHS Trigger: GCTATGAGTCATAATTGTGCCAAGTTGTTTCATGCAGTCCTCAAAAATTAGATGTAATTGAGCTTTGTGTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCGGTGTCGCCGGCAAATaGCCCCGCCGGCTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSGVAGK*PRRLPH Trigger: ATGTGGGAGCCGGCGGGGGCATTTGCCGGCGACACC...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCGCCCGGAGCTCCTGCTaGGAGCTGTGGCCCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSARSSC*ELWPHF Trigger: GAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGC...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTCTAGCCCGGAGCTCCTaGTGCGAGCTGTGGCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPLARSS*CELWPH Trigger: GTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGCTAG...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAATCCTGCTGCGAGCTGTaGCCCCACTTCCGGCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKSCCEL*PHFRPP Trigger: CGGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGA...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAAGACTCGCGGACAGGCTaGGCAGTCGGCCGCGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: CDILFTSLPYLSLSSRRKDSRTG*AVGRGH Trigger: GTGCCCGCGGCCGACTGCGCAGCCTGTCCGCGAGTC...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCCAAATGAATAGCCACTaGTCCACCCAAGGAACGGCC | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSQMNSH*STQGTA Trigger: GGCCGTTCCTTGGGTGGAGCAGTGGCTATTCATTTG...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCTTTTCAGAAGCCAAATaGATAGCCACTGCTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSFSEAK*IATAPP Trigger: GGGTGGAGCAGTGGCTATTCATTTGGCTTCTGAAAA...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCGAATGCCAGTGGGCATaGGAACATAAAGACGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSECQWA*EHKDVK Trigger: CTTCACGTCTTTATGTTCCCATGCCCACTGGCATTC...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCTGCCATGTGTCATTGTaGGTCCCATCTGGAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSCHVSL*VPSGKM Trigger: CATTTTTCCAGATGGGACTCACAATGACACATGGCA...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCTCCACAGTAAAGGAGTaGCTCCTGAAGAAGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSSTVKE*LLKKSH Trigger: ATGAGACTTCTTCAGGAGTCACTCCTTTACTGTGGA...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCAAGCATCAGATGGTATaGATTCTCAACAGGTATTAC | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSKHQMV*ILNRYY Trigger: GTAATACCTGTTGAGAATTCATACCATCTGATGCTT...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCGTGACCTATGTTGCCTaGATTCCCATGAAAATAAAT | + |
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Preference number: 4 (lower is better) Translates to: SNTDASGGIALGTASALSVTYVA*IPMKIN Trigger: ATTTATTTTCATGGGAATGCAGGCAACATAGGTCAC...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTCATGTGGAATGCCAGTaGGCATGGGAACATAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPHVECQ*AWEHKD Trigger: GTCTTTATGTTCCCATGCCCACTGGCATTCCACATG...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTACAGGGTTGTTGCAATaGCAAGTGCTCCAGTCACTT | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPTGLLQ*QVLQSL Trigger: AAGTGACTGGAGCACTTGCCATTGCAACAACCCTGT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAACTGTTCAAGTGCAGTaGAATAGCCTTGGCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKTVQVQ*NSLGTA Trigger: GGCAGTGCCAAGGCTATTTCACTGCACTTGAACAGT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTCAAAAACAGGGTTGTTaGAATGGCAAGTGCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPQKQGC*NGKCSS Trigger: ACTGGAGCACTTGCCATTGCAACAACCCTGTTTTTG...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTTCAAAAATGATGCCATaGGCTTCATGGACCCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPSKMMP*ASWTPD Trigger: ATCAGGGGTCCATGAAGCCCATGGCATCATTTTTGA...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAAGTTGGGGAATAGGGTaGATTGTCTCCAGTGTATCG | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKSWGIG*IVSSVS Trigger: CGATACACTGGAGACAATTCACCCTATTCCCCAACT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTTATTTCTACATGCCATaGTCCAGACTGTACCTAACA | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPYFYMP*SRLYLT Trigger: TGTTAGGTACAGTCTGGATCATGGCATGTAGAAATA...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTTGTTGCAATGGCAAGTaGTCCAGTCACTTTTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPCCNGK*SSHFLL Trigger: TAACAAAAAGTGACTGGAGCACTTGCCATTGCAACA...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAGAAAATGTTTTCATGTaGAATGCCAGTGGGCATGGG | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKENVFM*NASGHG Trigger: CCCATGCCCACTGGCATTCCACATGAAAACATTTTC...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAATGCCATGGGCTTCATaGACCCCTGATACTAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKMPWAS*TPDTKF Trigger: AAACTTAGTATCAGGGGTCCATGAAGCCCATGGCAT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTATTCCCACTAAGCAATaGGTCCACAGTAAAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPIPTKQ*VHSKGV Trigger: CACTCCTTTACTGTGGACCCATTGCTTAGTGGGAAT...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAATCCAGAGATGAAAAGTaGAGGCATTCTACACTGAGA | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKSRDEK*RHSTLR Trigger: TCTCAGTGTAGAATGCCTTCACTTTTCATCTCTGGA...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAACTGGTGGAATTAATTaGTCTGAGAGTCCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKTGGIN*SESPEM Trigger: CATCTCTGGACTCTCAGATCAATTAATTCCACCAGT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTAACCCAAAAGGGTTATaGCTAATTTTTCCTCTCACA | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPNPKGL*LIFPLT Trigger: TGTGAGAGGAAAAATTAGTCATAACCCTTTTGGGTT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTACCTGTGACCTATGTTaGCTGCATTCCCATGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPTCDLC*LHSHEN Trigger: ATTTTCATGGGAATGCAGGCAACATAGGTCACAGGT...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTCTAATTTTTGAGGACTaGATGAAACAACTTGGCACA | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPLIFED*MKQLGT Trigger: TGTGCCAAGTTGTTTCATGCAGTCCTCAAAAATTAG...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAATCTCTTAGTCCGAGATaGGGAGAGTTCATAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKSLSPR*GEFIKL Trigger: CAACTTTATGAACTCTCCCCATCTCGGACTAAGAGA...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTATGAAAATAAAGTGCTaGCCATATGTGGTATGCTTA | + |
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Preference number: 4 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPMKIKC*PYVVCL Trigger: TAAGCATACCACATATGGCCAGCACTTTATTTTCAT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR TCA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTTTTTTGAGGACTGCATaGAACAACTTGGCACAATTA | + |
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Preference number: 4 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPFLRTA*NNLAQL Trigger: TAATTGTGCCAAGTTGTTTCATGCAGTCCTCAAAAA...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTACAAATGTAAATGTTTaGTTGCCATGGTTAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPTNVNV*LPWLAH Trigger: GTGTGCTAACCATGGCAAGCAAACATTTACATTTGT...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAATTTGTAAGAAAAAGCTaGATCTCAGCATTCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKFVRKS*ISAFTR Trigger: TCTGGTGAATGCTGAGATCCAGCTTTTTCTTACAAA...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAAATGTTTGCTTGCCATaGTTAGCACACAATGTACTA | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKNVCLP*LAHNVL Trigger: TAGTACATTGTGTGCTAACCATGGCAAGCAAACATT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAAGTCAAAAACCTAATTaGAAAAACAGGGTTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: EGRERQTSTLQFLKSWLKSQKPN*KNRVVA Trigger: TGCAACAACCCTGTTTTTGCAATTAGGTTTTTGACT...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATGGCCATATGTGGTATaGTTAAAAATGTGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: CDILFTSLPYLSLSSRRKWPYVV*LKMCSP Trigger: TGGAGAACACATTTTTAAGCATACCACATATGGCCA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAAACGGTACATTTGTATTaGAAAACAGGGTCCCATTTA | + |
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Preference number: 4 (lower is better) Translates to: CDILFTSLPYLSLSSRRKTVHLY*KTGSHL Trigger: TAAATGGGACCCTGTTTTCCAATACAAATGTACCGT...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATCTGTTCTAGTTGCTTaGAGAAAGCCACTAAATATA | + |
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Preference number: 4 (lower is better) Translates to: CDILFTSLPYLSLSSRRKSVLVA*RKPLNI Trigger: TATATTTAGTGGCTTTCTGCAAGCAACTAGAACAGA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR GCA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAATACAAATATAAGGTATaGCATGTAAGCTCGTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: CDILFTSLPYLSLSSRRKYKYKV*HVSSCL Trigger: TAGACACGAGCTTACATGGCATACCTTATATTTGTA...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| 3UTR CAA 72 bp | ATGATCCAGACTGTACCTAACAAAAACACGGTACATTaGTATTGGAAAACAGGGTCCCATTTATTTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: MIQTVPNKNTVH*YWKTGSHLFVR Trigger: TCTTACAAATAAATGGGACCCTGTTTTCCAATACAAATGTACCGTGTTTTTGTTAGGTACAGTCTGGATCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS CCA 90 bp | CGCTGCCGGCGCCACGGTCTAGCCCGGAGCTCCTGCTGCGAGCTGTaGCCCCACTTCCGGCCCCCGCTCGGGTGTCGCCGGCAAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: RCRRHGLARSSCCEL*PHFRPPLGCRRQMP Trigger: GGGCATTTGCCGGCGACACCCGAGCGGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGCTAGACCGTGGCGCCGGCAGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS GCA 90 bp | TCGCTTCCGTCGCTCCTCATCATCCTCCTCCAGCCCAGGGGCCGCTaGCGGCGCCACGGTCTAGCCCGGAGCTCCTGCTGCGAGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SLPSLLIILLQPRGR*RRHGLARSSCCELW Trigger: CCACAGCTCGCAGCAGGAGCTCCGGGCTAGACCGTGGCGCCGGCAGCGGCCCCTGGGCTGGAGGAGGATGATGAGGAGCGACGGAAGCGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | TCAAATACAGATGCTAGTGGTGGTATAGCCCTAGGCACAGCCTCTGCCCTTAGCCTCTGTTCTAGTTGCTaGCAGAAAGCCACTAAATAT | + |
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Preference number: 5 (lower is better) Translates to: SNTDASGGIALGTASALSLCSSC*QKATKY Trigger: ATATTTAGTGGCTTTCTGCAAGCAACTAGAACAGAG...GCTAAGGGCAGAGGCTGTGCCTAGGGCTATACCACCACTAGCATCTGTATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | GAAGGTAGGGAACGCCAAACAAGTACTCTACAATTTTTGAAGTCCTGGCTTAAAGCAAAAACAGGGTTGTaGCAATGGCAAGTGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: EGRERQTSTLQFLKSWLKAKTGL*QWQVLQ Trigger: CTGGAGCACTTGCCATTGCAACAACCCTGTTTTTGC...TTTAAGCCAGGACTTCAAAAATTGTAGAGTACTTGTTTGGCGTTCCCTACCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTATTGCAAAAACAGGGTaGTTGCAATGGCAAGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPIAKTG*LQWQVL Trigger: GAGCACTTGCCATTGCAACAACCCTGTTTTTGCAAT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS TCA 90 bp | AATGTTTTCATGTGGAATGCCAGTGGGCATGGGAACATAAAGACGTaGAGAGGATGGCTGTTCTGGAAAATAAAGCAATACATCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: NVFMWNASGHGNIKT*RGWLFWKIKQYILE Trigger: TTCCAGGATGTATTGCTTTATTTTCCAGAACAGCCATCCTCTTCACGTCTTTATGTTCCCATGCCCACTGGCATTCCACATGAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTAAAAACACGGTACATTaGTATTGGAAAACAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPKNTVH*YWKTGS Trigger: GGACCCTGTTTTCCAATACAAATGTACCGTGTTTTT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTCCCCTGATACTAAGTTaGTTTTCCACCTCTTACCCA | + |
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Preference number: 5 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPPLILS*FSTSYP Trigger: TGGGTAAGAGGTGGAAAACAAACTTAGTATCAGGGG...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | ACATATACTTCCATTCCCACTAAGCAATGGGTCCACAGTAAAGGAGTGACTCCTAATGTAAATGTTTGCTaGCCATGGTTAGCACACAAT | + |
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Preference number: 5 (lower is better) Translates to: TYTSIPTKQWVHSKGVTPNVNVC*PWLAHN Trigger: ATTGTGTGCTAACCATGGCAAGCAAACATTTACATT...AGGAGTCACTCCTTTACTGTGGACCCATTGCTTAGTGGGAATGGAAGTATATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTTGCTCCAGTCACTTTTaGTTAGAAATGCTTTGCATT | + |
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Preference number: 5 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPCSSHF*LEMLCI Trigger: AATGCAAAGCATTTCTAACAAAAAGTGACTGGAGCA...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | TGTAAGAAAAAGCTGGATCTCAGCATTCACCAGAGCAAAATTCAATGGCAACCTAACAAATGTAAATGTTaGCTTGCCATGGTTAGCACA | + |
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Preference number: 5 (lower is better) Translates to: CKKKLDLSIHQSKIQWQPNKCKC*LAMVST Trigger: TGTGCTAACCATGGCAAGCAAACATTTACATTTGTT...AGGTTGCCATTGAATTTTGCTCTGGTGAATGCTGAGATCCAGCTTTTTCTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS-3UTR CAA 90 bp | TGTGACATCCTTTTTACAAGTTTACCTTACCTATCCCTATCCTCAAGGAGAAAACTCTTTACGACTTCTTaGATGAACTGTTCAAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: CDILFTSLPYLSLSSRRKLFTTS*MNCSSA Trigger: TGCACTTGAACAGTTCATCAAAGAAGTCGTAAAGAG...TTTTCTCCTTGAGGATAGGGATAGGTAAGGTAAACTTGTAAAAAGGATGTCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS GCA 72 bp | CGCTGCCGGCGCCACGGTCTAGCCCGGAGCTCCTGCTaGGAGCTGTGGCCCCACTTCCGGCCCCCGCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RCRRHGLARSSC*ELWPHFRPPLG Trigger: CCCGAGCGGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGCTAGACCGTGGCGCCGGCAGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS GCA 72 bp | GGCCGCTGCCGGCGCCACGGTCTAGCCCGGAGCTCCTaGTGCGAGCTGTGGCCCCACTTCCGGCCCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: GRCRRHGLARSS*CELWPHFRPPL Trigger: GAGCGGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGCTAGACCGTGGCGCCGGCAGCGGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS CCA 72 bp | CGCCACGGTCTAGCCCGGAGCTCCTGCTGCGAGCTGTaGCCCCACTTCCGGCCCCCGCTCGGGTGTCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: RHGLARSSCCEL*PHFRPPLGCRR Trigger: CCGGCGACACCCGAGCGGGGGCCGGAAGTGGGGCCACAGCTCGCAGCAGGAGCTCCGGGCTAGACCGTGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS GCA 72 bp | CCCACTTCCGGCCCCCGCTCGGGTGTCGCCGGCAAATaGCCCCGCCGGCTCCCACATAACCTGTTCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: PTSGPRSGVAGK*PRRLPHNLFSV Trigger: GACGGAGAACAGGTTATGTGGGAGCCGGCGGGGGCATTTGCCGGCGACACCCGAGCGGGGGCCGGAAGTGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS CAA 72 bp | TTCTTTGATGAACTGTTCAAGTGCAGTGAAATAGCCTaGGCACTGCCATGTGTCATTGTGAGTCCCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: FFDELFKCSEIA*ALPCVIVSPIW Trigger: CCAGATGGGACTCACAATGACACATGGCAGTGCCAAGGCTATTTCACTGCACTTGAACAGTTCATCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS CAA 90 bp | CTTTACGACTTCTTTGATGAACTGTTCAAGTGCAGTGAAATAGCCTaGGCACTGCCATGTGTCATTGTGAGTCCCATCTGGAAAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: LYDFFDELFKCSEIA*ALPCVIVSPIWKNG Trigger: GCCATTTTTCCAGATGGGACTCACAATGACACATGGCAGTGCCAAGGCTATTTCACTGCACTTGAACAGTTCATCAAAGAAGTCGTAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS TCA 72 bp | ATGGCTGAAATCCTATGTGAATTTTCAGAAGCCAAATaGATAGCCACTGCTCCACCCAAGGAACGGCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: MAEILCEFSEAK*IATAPPKERPK Trigger: TTTTGGCCGTTCCTTGGGTGGAGCAGTGGCTATTCATTTGGCTTCTGAAAATTCACATAGGATTTCAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS CAA 90 bp | CGTAGTCTAACACAGCTTCAGAATCTAAGTAGAGTCCTTCTTCACTaGCTTCTCCTTCACTTTTTCCATATCCTCGATAATCAACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RSLTQLQNLSRVLLH*LLLHFFHILDNQPA Trigger: TGCTGGTTGATTATCGAGGATATGGAAAAAGTGAAGGAGAAGCAAGTGAAGAAGGACTCTACTTAGATTCTGAAGCTGTGTTAGACTACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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| CDS TCA 72 bp | TTACTGGTGGAATTAATTGATCTGAGAGTCCAGAGATaGAAAGTGAAGGCATTCTACACTGAGAGATTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLVELIDLRVQR*KVKAFYTERFF Trigger: GAAAAATCTCTCAGTGTAGAATGCCTTCACTTTTCATCTCTGGACTCTCAGATCAATTAATTCCACCAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375898.4 |
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