RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABHD11 (Homo sapiens)

Ensembl gene IDs: ENSG00000106077

Ensembl transcript IDs: ENST00000222800.7, ENST00000222800.8, ENST00000357419.8, ENST00000357419.9, ENST00000395147.9, ENST00000412965.5, ENST00000437775.6, ENST00000437775.7, ENST00000437891.5, ENST00000458339.5, ENST00000458339.6, ENST00000462381.1, ENST00000468331.1, ENST00000468998.1, ENST00000474130.1, ENST00000480445.5, ENST00000486114.1, ENST00000497897.5

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTCTGGCCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 1 (lower is better)
Translates to: ALASVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGCCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR GCA 90 bp TGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTaGATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGG +
Preference number: 1 (lower is better)
Translates to: CGRSAWIQWPAFGTV*IWARGKSRIISGWW
Trigger: CCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 90 bp CGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTaGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: RSAWIQWPAFGTVCI*ARGKSRIISGWWLG
Trigger: TCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 90 bp CGGATGGCAGCTATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTaGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: RMAAMKSCGRSAWIQ*PAFGTVCIWARGKS
Trigger: GCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
ENST00000458339.5
3UTR CCA 90 bp AGGAAGCCTCGGATGGCAGCTATGAAGTCCTGTGGGCGGTCAGCGTaGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGA +
Preference number: 1 (lower is better)
Translates to: RKPRMAAMKSCGRSA*IQWPAFGTVCIWAR
Trigger: TCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
ENST00000458339.5
3UTR CCA 90 bp AAGAGCAGGCCCCAGGGTTGTGACCACGTCTCTGAAGGGCTGGCCTaGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGG +
Preference number: 1 (lower is better)
Translates to: KSRPQGCDHVSEGLA*LGGNLGECQEGDSR
Trigger: CCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGAGACGTGGTCACAACCCTGGGGCCTGCTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR TCA 90 bp CCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTGCGATGTTaGTGGCCCTCATGGCTGCCACATAGGTTGCAAAGTGGGAGACAC +
Preference number: 1 (lower is better)
Translates to: PPVFGHGSGAAHLRC*WPSWLPHRLQSGRH
Trigger: GTGTCTCCCACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR CCA 90 bp CAACTCTTAGACCAGGAAGCCTCGGATGGCAGCTATGAAGTCCTGTaGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTG +
Preference number: 1 (lower is better)
Translates to: QLLDQEASDGSYEVL*AVSVDPVASVRHRL
Trigger: CAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTCTAAGAGTTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000458339.5
3UTR CCA 90 bp GCAGGCCCCAGGGTTGTGACCACGTCTCTGAAGGGCTGGCCTGGCTaGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATT +
Preference number: 1 (lower is better)
Translates to: AGPRVVTTSLKGWPG*VAISENARKETPGI
Trigger: AATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGAGACGTGGTCACAACCCTGGGGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR CCA 90 bp CAGAGAAGAGCAGGCCCCAGGGTTGTGACCACGTCTCTGAAGGGCTaGCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACT +
Preference number: 1 (lower is better)
Translates to: QRRAGPRVVTTSLKG*PGWVAISENARKET
Trigger: AGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGAGACGTGGTCACAACCCTGGGGCCTGCTCTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR CCA 90 bp CAGAAGGTCCTGCAGGTCCTGGCTCATGATCTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAG +
Preference number: 1 (lower is better)
Translates to: QKVLQVLAHDLVAHV*AVGAVTVVTSIHRQ
Trigger: CTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACATGAGCTACGAGATCATGAGCCAGGACCTGCAGGACCTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR TCA 90 bp TTCTTGCCAGCAACTCTTAGACCAGGAAGCCTCGGATGGCAGCTATaGAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCG +
Preference number: 1 (lower is better)
Translates to: FLPATLRPGSLGWQL*SPVGGQRGSSGQRS
Trigger: CGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTCTAAGAGTTGCTGGCAAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000458339.5
3UTR GCA 90 bp ACGGGAGCGGGGCAGCTCATCTGCGATGTTGATGGCCCTCATGGCTaGCACATAGGTTGCAAAGTGGGAGACACCTGTGCTTTCCACTGG +
Preference number: 1 (lower is better)
Translates to: TGAGQLICDVDGPHG*HIGCKVGDTCAFHW
Trigger: CCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGCTCCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR GCA 90 bp CTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTaGGATGTTGATGGCCCTCATGGCTGCCACATAGGTTGCAAAGTG +
Preference number: 1 (lower is better)
Translates to: LFIRQFSGTGAGQLI*DVDGPHGCHIGCKV
Trigger: CACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR CCA 90 bp GCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTaGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCCAAGATCTT +
Preference number: 1 (lower is better)
Translates to: AGMHELGVSTKEKEC*PEVGLLPLWESQDL
Trigger: AAGATCTTGGCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 90 bp GGCTGCCACATAGGTTGCAAAGTGGGAGACACCTGTGCTTTCCACTaGGCTGATATCTACAGCAATGAGACGTTCCACCAGCTCTGGCCT +
Preference number: 1 (lower is better)
Translates to: GCHIGCKVGDTCAFH*ADIYSNETFHQLWP
Trigger: AGGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGATATCAGCCCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR GCA 90 bp CAGCTCATCTGCGATGTTGATGGCCCTCATGGCTGCCACATAGGTTaGAAAGTGGGAGACACCTGTGCTTTCCACTGGGCTGATATCTAC +
Preference number: 1 (lower is better)
Translates to: QLICDVDGPHGCHIG*KVGDTCAFHWADIY
Trigger: GTAGATATCAGCCCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR GCA 90 bp CGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGTGGGGCAGAAGGTCCTaGAGGTCCTGGCTCATGATC +
Preference number: 2 (lower is better)
Translates to: RHRLHLGPREEPHNLRVVWGRRS*RSWLMI
Trigger: GATCATGAGCCAGGACCTGCAGGACCTTCTGCCCCA...CACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR CCA 90 bp GTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACCTATCTGAAGGGCTGGCCTaGCTGGGTGGCAATCTCGGA +
Preference number: 2 (lower is better)
Translates to: VWAVGAVTVVTSIHRQHLSEGLA*LGGNLG
Trigger: TCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGA...TAGGTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR-3UTR GCA 90 bp CCAGCAGCATGGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGACGCAGGGCATGGGGCAGAAGGTCCTaGAGGTCCTGGCTCATGATC +
Preference number: 2 (lower is better)
Translates to: PAAWLSFLPCCGQRRRRAWGRRS*RSWLMI
Trigger: GATCATGAGCCAGGACCTGCAGGACCTTCTGCCCCA...TGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000474130.1
3UTR-3UTR GCA 90 bp GTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACCTACTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGC +
Preference number: 2 (lower is better)
Translates to: VWAVGAVTVVTSIHRQHLLSFLP*CGQRRR
Trigger: GCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAG...TAGGTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR-3UTR GCA 90 bp CACCCTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTGGCGGGGCAGCTCATCTaGGATGTTGATGGCCCTCAT +
Preference number: 2 (lower is better)
Translates to: HPPHEAPVYLYQVSEQVLAGQLI*DVDGPH
Trigger: ATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGC...CAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR GCA 90 bp TGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGG +
Preference number: 2 (lower is better)
Translates to: WLGCTNWEFPPRRKSVGPLVSRC*RTAMSW
Trigger: CCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAA...CGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000437891.5
3UTR-3UTR CCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGCTGGTCTCCAACTCCTaGCCTCAAGTCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLLVSNS*PQVILP
Trigger: CGGGAGGATGACTTGAGGCCAGGAGTTGGAGACCAG...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR CCA 90 bp TCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCACGGCCATGTCCTGGATGCTGGTCTCCAACTCCTaGCCTCAAGTCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: STSTRLVSRCCRTAMSWMLVSNS*PQVILP
Trigger: CGGGAGGATGACTTGAGGCCAGGAGTTGGAGACCAG...CATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR CCA 90 bp TGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGTTTCCTCCCATGCTGTaGCCAACGACGACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: WLGCTNWEFPPRRKSVGPFPPML*PTTTQG
Trigger: GCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAA...CGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR GCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGCTCGTGCCCACACAGTaGCTGTCTGAGTCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLLVPTQ*LSESFC
Trigger: ACAGAAGGACTCAGACAGGCACTGTGTGGGCACGAG...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR GCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGCCCTGTAAAACCTCGTaGCCACACAGTGCCTGTCTG +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLPCKTS*PHSACL
Trigger: CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGG...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR GCA 90 bp CACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTAAGATCTTGTCTAGGTaGTGGGTCAGGGCATCCAAG +
Preference number: 2 (lower is better)
Translates to: HRLHLGPREEPHNLRVVAKILSR*WVRASK
Trigger: CTTGGATGCCCTGACCCAGCACCTAGACAAGATCTT...AGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR-3UTR CCA 90 bp GAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCCAAGATCTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: EKECWPEVGLLPLWESQDLVAHV*AVGAVT
Trigger: GGTGACAGCCCCCACAGCCCAGACATGAGCTACGAG...ATCTTGGCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR CAA 90 bp GGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTaGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCCAAGATCT +
Preference number: 2 (lower is better)
Translates to: GWDARTGSFHQGERV*ARGRTPASVGKPRS
Trigger: AGATCTTGGCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR-3UTR TCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGTGGAGTGTAGTGGTGTaGTCTCGGCTCATTGCAACC +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLWSVVV*SRLIAT
Trigger: GGTTGCAATGAGCCGAGATCACACCACTACACTCCA...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR TCA 90 bp TGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGGCAGGTCCTGGCTCATaGTCTCGTAGCTCATGTCTG +
Preference number: 2 (lower is better)
Translates to: WLGCTNWEFPPRRKSVGPAGPGS*SRSSCL
Trigger: CAGACATGAGCTACGAGATCATGAGCCAGGACCTGC...CGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR GCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGAAATGTGGAGCAGGCTaGAGAGACTTGAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLKCGAG*RDLKPG
Trigger: CCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTT...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR GCA 90 bp CAGCAACTCTTAGACCAGGAAGCCTCGGATGGCAGCTATGAAGTCCTGTGGGCGCTCGTGCCCACACAGTaGCTGTCTGAGTCCTTCTGT +
Preference number: 2 (lower is better)
Translates to: QQLLDQEASDGSYEVLWALVPTQ*LSESFC
Trigger: ACAGAAGGACTCAGACAGGCACTGTGTGGGCACGAG...CGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTCTAAGAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR GCA 90 bp ATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCC +
Preference number: 2 (lower is better)
Translates to: IISGWWLGCTNWEFPPRRRLVSR*CRTAMS
Trigger: GGACATGGCCGTGCGGCAGCACCTGCTCACTAACCT...TCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACCACCCTGAGATTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000437891.5
3UTR-3UTR CCA 90 bp TGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCAACTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACC +
Preference number: 2 (lower is better)
Translates to: WLGGNLGECQEGDSRNFQLVAHV*AVGAVT
Trigger: GGTGACAGCCCCCACAGCCCAGACATGAGCTACGAG...TTGGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR-3UTR CCA 90 bp CAGCAACTCTTAGACCAGGAAGCCTCGGATGGCAGCTATGAAGTCCTGTGGGCGGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGC +
Preference number: 2 (lower is better)
Translates to: QQLLDQEASDGSYEVLWAVVPAA*LSFLPC
Trigger: GCATGGGAGGAAAGACAGCCATGCTGCTGGCACTAC...CGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTCTAAGAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR CCA 90 bp TCCTTCTGTGCCCAAATGTGGAGCAGGCTGCAGAGACTTGAAGCCTGGGGTTTTCTGGTCTCCAACTCCTaGCCTCAAGTCATCCTCCCG +
Preference number: 2 (lower is better)
Translates to: SFCAQMWSRLQRLEAWGFLVSNS*PQVILP
Trigger: CGGGAGGATGACTTGAGGCCAGGAGTTGGAGACCAG...AAAACCCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR CCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGTTCTGTGCCCAAATGTaGAGCAGGCTGCAGAGACTT +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLFCAQM*SRLQRL
Trigger: AAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAA...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR CCA 90 bp CACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTACCTGTGCTTTCCACTaGGCTGATATCTACAGCAAT +
Preference number: 2 (lower is better)
Translates to: HRLHLGPREEPHNLRVVATCAFH*ADIYSN
Trigger: ATTGCTGTAGATATCAGCCCAGTGGAAAGCACAGGT...AGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR-3UTR CCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGCAGAGACTTGAAGCCTaGGGTTTTGTGCCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLQRLEA*GFVPPF
Trigger: AAAAGGAGGCACAAAACCCCAGGCTTCAAGTCTCTG...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR TCA 90 bp TCCTTCTGTGCCCAAATGTGGAGCAGGCTGCAGAGACTTGAAGCCTGGGGTTTTTGGAGTGTAGTGGTGTaGTCTCGGCTCATTGCAACC +
Preference number: 2 (lower is better)
Translates to: SFCAQMWSRLQRLEAWGFWSVVV*SRLIAT
Trigger: GGTTGCAATGAGCCGAGATCACACCACTACACTCCA...AAAACCCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR TCA 90 bp AGCCTGAGGTCTGACCACCCCTGTAAAACCTCGTGCCCACACAGTGCCTGTCTGTTATTCATTAAAGCCTaGGGTCTGACCACCCCTGTA +
Preference number: 2 (lower is better)
Translates to: SLRSDHPCKTSCPHSACLLFIKA*GLTTPV
Trigger: TACAGGGGTGGTCAGACCTCAGGCTTTAATGAATAA...CAGACAGGCACTGTGTGGGCACGAGGTTTTACAGGGGTGGTCAGACCTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR GCA 90 bp AGTCCTTCTGTGCCCAAATGTGGAGCAGGCTGCAGAGACTTGAAGCCTGGGGTTGCTCATTGCAACCTCTaGCTCCAGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: SPSVPKCGAGCRDLKPGVAHCNL*LQGSSD
Trigger: ATCACTTGAACCCTGGAGGCAGAGGTTGCAATGAGC...AACCCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR-3UTR GCA 90 bp TCCTTCTGTGCCCAAATGTGGAGCAGGCTGCAGAGACTTGAAGCCTGGGGTTTTGCTCATTGCAACCTCTaGCTCCAGGGTTCAAGTGAT +
Preference number: 2 (lower is better)
Translates to: SFCAQMWSRLQRLEAWGFAHCNL*LQGSSD
Trigger: ATCACTTGAACCCTGGAGGCAGAGGTTGCAATGAGC...AAAACCCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR CCA 72 bp AGTGCCAGCAGCATGGCTGTCTTTCCTCCCATGCTGTaGCCAACGACGACGCAGGGCACCAGGCCCAGCTGG +
Preference number: 3 (lower is better)
Translates to: SASSMAVFPPML*PTTTQGTRPSW
Trigger: CCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000474130.1
3UTR CCA 72 bp GCTATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTaGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGA +
Preference number: 3 (lower is better)
Translates to: AMKSCGRSAWIQ*PAFGTVCIWAR
Trigger: TCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
ENST00000458339.5
3UTR CCA 72 bp TGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTaGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGG +
Preference number: 3 (lower is better)
Translates to: WIQWPAFGTVCI*ARGKSRIISGW
Trigger: CCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 72 bp GACCAGGAAGCCTCGGATGGCAGCTATGAAGTCCTGTaGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGG +
Preference number: 3 (lower is better)
Translates to: DQEASDGSYEVL*AVSVDPVASVR
Trigger: CCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000458339.5
3UTR GCA 72 bp TCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: SVVPAAWLSFLP*CGQRRRRAPGP
Trigger: TGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR GCA 72 bp CGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTaGGATGTTGATGGCCCTCATGGCTGCCACATAGGT +
Preference number: 3 (lower is better)
Translates to: RQFSGTGAGQLI*DVDGPHGCHIG
Trigger: ACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR GCA 72 bp TCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTaGATCTGGGCCCGAGGGAAGAGCCGCATAATCTCA +
Preference number: 3 (lower is better)
Translates to: SAWIQWPAFGTV*IWARGKSRIIS
Trigger: TGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 72 bp CCCCAGGGTTGTGACCACGTCTCTGAAGGGCTGGCCTaGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGA +
Preference number: 3 (lower is better)
Translates to: PQGCDHVSEGLA*LGGNLGECQEG
Trigger: TCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGAGACGTGGTCACAACCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR GCA 72 bp CGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGGATGACAGAACTGAGC +
Preference number: 3 (lower is better)
Translates to: RPSTSTRLVSRC*RTAMSWMTELS
Trigger: GCTCAGTTCTGTCATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000437891.5
3UTR TCA 72 bp TTCGGGCACGGGAGCGGGGCAGCTCATCTGCGATGTTaGTGGCCCTCATGGCTGCCACATAGGTTGCAAAGT +
Preference number: 3 (lower is better)
Translates to: FGHGSGAAHLRC*WPSWLPHRLQS
Trigger: ACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR TCA 72 bp GCAACTCTTAGACCAGGAAGCCTCGGATGGCAGCTATaGAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: ATLRPGSLGWQL*SPVGGQRGSSG
Trigger: GCCACTGGATCCACGCTGACCGCCCACAGGACTTCATAGCTGCCATCCGAGGCTTCCTGGTCTAAGAGTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000458339.5
3UTR GCA 72 bp AAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCCTGGATGACAGAACTG +
Preference number: 3 (lower is better)
Translates to: KRPSTSTRLVSR*CRTAMSWMTEL
Trigger: CAGTTCTGTCATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357419.8
ENST00000437891.5
3UTR CCA 72 bp ATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTaGTGGCTGGGATGCACGAACTGGGAGTTTCCACCA +
Preference number: 3 (lower is better)
Translates to: IWARGKSRIISG*WLGCTNWEFPP
Trigger: TGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR CCA 72 bp CTGCAGGTCCTGGCTCATGATCTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATC +
Preference number: 3 (lower is better)
Translates to: LQVLAHDLVAHV*AVGAVTVVTSI
Trigger: GATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACATGAGCTACGAGATCATGAGCCAGGACCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
3UTR GCA 72 bp GGGCAGCTCATCTGCGATGTTGATGGCCCTCATGGCTaGCACATAGGTTGCAAAGTGGGAGACACCTGTGCT +
Preference number: 3 (lower is better)
Translates to: GQLICDVDGPHG*HIGCKVGDTCA
Trigger: AGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
3UTR CCA 72 bp CACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTaGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: HELGVSTKEKEC*PEVGLLPLWES
Trigger: GCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
3UTR GCA 72 bp TGTCTGAGTCCTTCTGTGCCCAAATGTGGAGCAGGCTaGAGAGACTTGAAGCCTGGGGTTTTGTGCCTCCTT +
Preference number: 3 (lower is better)
Translates to: CLSPSVPKCGAG*RDLKPGVLCLL
Trigger: AAGGAGGCACAAAACCCCAGGCTTCAAGTCTCTGCAGCCTGCTCCACATTTGGGCACAGAAGGACTCAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000222800.7
ENST00000357419.8
ENST00000437775.6
3UTR CCA 72 bp ATAGGTTGCAAAGTGGGAGACACCTGTGCTTTCCACTaGGCTGATATCTACAGCAATGAGACGTTCCACCAG +
Preference number: 3 (lower is better)
Translates to: IGCKVGDTCAFH*ADIYSNETFHQ
Trigger: CTGGTGGAACGTCTCATTGCTGTAGATATCAGCCCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357419.8
CDS-3UTR GCA 90 bp GTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCCCCTCGGCCGCCGCTaGTGCTGCTGGGTGCGACAG +
Preference number: 4 (lower is better)
Translates to: VLWAVSVDPVASVRHRLHPLGRR*CCWVRQ
Trigger: CTGTCGCACCCAGCAGCAGCAGCGGCGGCCGAGGGG...ATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp TCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SAWIQWPAFGTVCIWARGDGREG*LPVQKP
Trigger: AGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTC...CCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp AGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCACGCCGCTGCTGCTGCTaGGTGCGACAGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: SPVGGQRGSSGQRSAPSARRCCC*VRQAPS
Trigger: CGAGGGTGCCTGTCGCACCCAGCAGCAGCAGCGGCG...TGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp GTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGGGCACCGTCTGCATCTaGGCCCGAGGGAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VGGQRGSSGQRSAPSASGGTVCI*ARGKSR
Trigger: GCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCC...CCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCTCAGCGTGGATCCAGTaGCCAGCGTTCGGCACCGTC +
Preference number: 4 (lower is better)
Translates to: GRSAWIQWPAFGTVCIWASAWIQ*PAFGTV
Trigger: GACGGTGCCGAACGCTGGCCACTGGATCCACGCTGA...GGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACCTAGCGAAGCTAGGGCCGTaGGGGCCGAGTCCCTCACGC +
Preference number: 4 (lower is better)
Translates to: VWAVGAVTVVTSIHRQHLAKLGP*GPSPSR
Trigger: GCGTGAGGGACTCGGCCCCCACGGCCCTAGCTTCGC...TAGGTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp TCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGTGTGGGCGGTCAGCGTaGATCCAGTGGCCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: SAWIQWPAFGTVCIWARGCGRSA*IQWPAF
Trigger: GAACGCTGGCCACTGGATCCACGCTGACCGCCCACA...CCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp CCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGGACTCGGCCGCCGCTGCTaGTGCTGGGTGCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PREEPHNLRVVAGMHELGLGRRC*CWVRQA
Trigger: TGCCTGTCGCACCCAGCAGCAGCAGCGGCGGCCGAG...TCCCAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp CAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAACCCTACGGCCTGTCTaGTGGGCCAAGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QRGSSGQRSAPSASGPEGTLRPV*WAKILA
Trigger: CGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGT...TCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp ATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IQWPAFGTVCIWARGKSRLVSRC*RTAMSW
Trigger: CCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAA...GCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp ATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCGCGTTCGGCACCGTCTaGATCTGGGCCCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MKSCGRSAWIQWPAFGTVAFGTV*IWARGK
Trigger: CTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGC...GACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp CAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGACTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: QRGSSGQRSAPSASGPEGLVAHV*AVGAVT
Trigger: GGTGACAGCCCCCACAGCCCAGACATGAGCTACGAG...TCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp ATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCCTGCCGAAGAGCCCGTaGAAAAAGACGACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: MKSCGRSAWIQWPAFGTVLPKSP*KKTTAG
Trigger: CCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAG...GACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp AGCTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTGCGATGGCGTTCGGCACCGTCTaGATCTGGGCCCGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SCSSASFRARERGSSSAMAFGTV*IWARGK
Trigger: CTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGC...CATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp AGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAACATGTCCTGTGGGGGTaGAGCAGTTGGGGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SVDPVASVRHRLHLGPREHVLWG*SSWGRF
Trigger: GAACCTCCCCCAACTGCTGCACCCCCACAGGACATG...TTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp CTGAGCTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTGCGTGTGGGCGGTCAGCGTaGATCCAGTGGCCAGCGTTC +
Preference number: 4 (lower is better)
Translates to: LSCSSASFRARERGSSSACGRSA*IQWPAF
Trigger: GAACGCTGGCCACTGGATCCACGCTGACCGCCCACA...CGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAGCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp TGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCCACGGCCATGTCCTGTaGGGGTGCAGCAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CIWARGKSRIISGWWLGCHGHVL*GCSSWG
Trigger: CCCCCAACTGCTGCACCCCCACAGGACATGGCCGTG...GCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp GGCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCTCGGCCGCCGCTGCTaGTGCTGGGTGCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: GLAGWQSRRMPGRRLQEFLGRRC*CWVRQA
Trigger: TGCCTGTCGCACCCAGCAGCAGCAGCGGCGGCCGAG...AAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp CTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LGVSTKEKECWPEVGLLPDGREG*LPVQKP
Trigger: AGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTC...AGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp GAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGTGGGGCAGAAGGTCCTaGAGGTCCTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: EVLWAVSVDPVASVRHRLWGRRS*RSWLMI
Trigger: GATCATGAGCCAGGACCTGCAGGACCTTCTGCCCCA...CAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp GTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: VASVRHRLHLGPREEPHNRLVSR*CRTAMS
Trigger: GGACATGGCCGTGCGGCAGCACCTGCTCACTAACCT...ATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCATAATCTCAGGGTGGTaGCTGGGATGCACGAACTGG +
Preference number: 4 (lower is better)
Translates to: GGQRGSSGQRSAPSASGPIISGW*LGCTNW
Trigger: CCAGTTCGTGCATCCCAGCCACCACCCTGAGATTAT...GGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR TCA 90 bp CGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCAGGTCCTGGCTCATaGTCTCGTAGCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RGSSGQRSAPSASGPEGRAGPGS*SRSSCL
Trigger: CAGACATGAGCTACGAGATCATGAGCCAGGACCTGC...TCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR TCA 90 bp TATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTCGGATGGCAGCTATaGAGTCCTGTGGGCGGTCAG +
Preference number: 4 (lower is better)
Translates to: YEVLWAVSVDPVASVRHRLGWQL*SPVGGQ
Trigger: CTGACCGCCCACAGGACTTCATAGCTGCCATCCGAG...ACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp GCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCACGGCCATGTCCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGC +
Preference number: 4 (lower is better)
Translates to: APVYLYQVSEQVLPHGHVLSFLP*CGQRRR
Trigger: GCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAG...GACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp TCAGGGTGGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGCGAAGCTAGGGCCGTaGGGGCCGAGTCCCTCACGC +
Preference number: 4 (lower is better)
Translates to: SGWWLGCTNWEFPPRRKSAKLGP*GPSPSR
Trigger: GCGTGAGGGACTCGGCCCCCACGGCCCTAGCTTCGC...ACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACCACCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp TGTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACCTCTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: CLGCGGCHRGYEHPPSAPLVAHV*AVGAVT
Trigger: GGTGACAGCCCCCACAGCCCAGACATGAGCTACGAG...AGGTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp TATGAAGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTTTTCCTCCCATGCTGTaGCCAACGACGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YEVLWAVSVDPVASVRHRFPPML*PTTTQG
Trigger: GCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAA...ACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACTTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp CTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCTTTCCTCCCATGCTGTaGCCAACGACGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LHTKRPSTSTRLVSRCCRFPPML*PTTTQG
Trigger: GCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAA...GCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp GGCTGGCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGATTTCCTCCCATGCTGTaGCCAACGACGACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GWPGWVAISENARKETPGFPPML*PTTTQG
Trigger: GCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAA...TCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp GGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCGGCACCGTCTGCATCTaGGCCCGAGGGAAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGWDARTGSFHQGERVLAGTVCI*ARGKSR
Trigger: GCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCC...GGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp CATGTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACGCTGGCCTGGCTGGGTaGCAATCTCGGAGAATGCCA +
Preference number: 4 (lower is better)
Translates to: HVWAVGAVTVVTSIHRQHAGLAG*QSRRMP
Trigger: TGGCATTCTCCGAGATTGCCACCCAGCCAGGCCAGC...GTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp TGTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACCTACGTCTCTGAAGGGCTaGCCTGGCTGGGTGGCAATC +
Preference number: 4 (lower is better)
Translates to: CLGCGGCHRGYEHPPSAPTSLKG*PGWVAI
Trigger: GATTGCCACCCAGCCAGGCCAGCCCTTCAGAGACGT...AGGTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp GGCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTGCTGCTGCTGCTGGGTaGGACAGGCACCCTCGCGAA +
Preference number: 4 (lower is better)
Translates to: GLAGWQSRRMPGRRLQEFAAAAG*DRHPRE
Trigger: TTCGCGAGGGTGCCTGTCGCACCCAGCAGCAGCAGC...AAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp CACCCTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTGACCCTACGGCCTGTCTaGTGGGCCAAGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: HPPHEAPVYLYQVSEQVLTLRPV*WAKILA
Trigger: CGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGT...CAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAGGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp CTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGTGGGGCAGAAGGTCCTaGAGGTCCTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: LHLGPREEPHNLRVVAGMWGRRS*RSWLMI
Trigger: GATCATGAGCCAGGACCTGCAGGACCTTCTGCCCCA...CATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp GCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGC +
Preference number: 4 (lower is better)
Translates to: ARGKSRIISGWWLGCTNWLSFLP*CGQRRR
Trigger: GCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAG...CCAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp CCAGCAGCATGGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGACGCAGGGCACTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGC +
Preference number: 4 (lower is better)
Translates to: PAAWLSFLPCCGQRRRRALSFLP*CGQRRR
Trigger: GCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAG...TGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp CCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGATGGCCCTCATGGCTaGCACATAGGTTGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: PVGGQRGSSGQRSAPSASDGPHG*HIGCKV
Trigger: CACTTTGCAACCTATGTGGCAGCCATGAGGGCCATC...AGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp GCCAAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGGGGGGAGGTTCCTTGTaGGGTCTGGGGGTGCCACTC +
Preference number: 4 (lower is better)
Translates to: AKILSRCWVRASKFTLHTGGGSL*GLGVPL
Trigger: GAGTGGCACCCCCAGACCGCACAAGGAACCTCCCCC...CGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTTGGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp GTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCGCACGGCCATGTCCTaGATGACAGAACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VASVRHRLHLGPREEPHNRTAMS*MTELSC
Trigger: ACAGCTCAGTTCTGTCATCCAGGACATGGCCGTGCG...ATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp TCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCCTGGGATGCACGAACTaGGAGTTTCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: SCGRSAWIQWPAFGTVCILGCTN*EFPPRR
Trigger: TCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAG...GATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR TCA 90 bp CATGTCTGGGCTGTGGGGGCTGTCACCGTGGTTACGAGCATCCACCGTCAGCACGCAGGTCCTGGCTCATaGTCTCGTAGCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: HVWAVGAVTVVTSIHRQHAGPGS*SRSSCL
Trigger: CAGACATGAGCTACGAGATCATGAGCCAGGACCTGC...GTGCTGACGGTGGATGCTCGTAACCACGGTGACAGCCCCCACAGCCCAGACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp TGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTGCTGCTGCTGCTGGGTaGGACAGGCACCCTCGCGAA +
Preference number: 4 (lower is better)
Translates to: WDARTGSFHQGERVLARGAAAAG*DRHPRE
Trigger: TTCGCGAGGGTGCCTGTCGCACCCAGCAGCAGCAGC...ACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp ATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGAAGCGCCTGCCGAAGAGCCCGTaGAAAAAGACGACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ILSRCWVRASKFTLHTKRLPKSP*KKTTAG
Trigger: CCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAG...GCGCTTCGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp CCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCCCCCTACGGCCTGTCTaGTGGGCCAAGATCTTGGCG +
Preference number: 4 (lower is better)
Translates to: PGWVAISENARKETPGISPLRPV*WAKILA
Trigger: CGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGG...GGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp GTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCAACAGTAGGCGCCGCTGCTGCTGCTaGGTGCGACAGGCACCCTCG +
Preference number: 4 (lower is better)
Translates to: VAISENARKETPGISNSRRRCCC*VRQAPS
Trigger: CGAGGGTGCCTGTCGCACCCAGCAGCAGCAGCGGCG...CCTACTGTTGGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CCA 90 bp CTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: LHLGPREEPHNLRVVAGMVVPAA*LSFLPC
Trigger: GCATGGGAGGAAAGACAGCCATGCTGCTGGCACTAC...CATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp CTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAAGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGC +
Preference number: 4 (lower is better)
Translates to: LGPREEPHNLRVVAGMHEVVPAA*LSFLPC
Trigger: GCATGGGAGGAAAGACAGCCATGCTGCTGGCACTAC...TTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp CGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGGACTCCTGCCTCTGTaGGAAAGCCAAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: RHRLHLGPREEPHNLRVVGLLPL*ESQDLV
Trigger: GACAAGATCTTGGCTTTCCCACAGAGGCAGGAGTCC...CACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp AGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGAAGCGCCCGTCTACCAGCTATGAAGTCCTGTaGGCGGTCAGCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: RCWVRASKFTLHTKRPSTSYEVL*AVSVDP
Trigger: TGGATCCACGCTGACCGCCCACAGGACTTCATAGCT...GGTAGACGGGCGCTTCGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCTGGGGGTGCAGCAGTTaGGGGAGGTTCCTTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GGWDARTGSFHQGERVLAWGCSS*GRFLVR
Trigger: CCGCACAAGGAACCTCCCCCAACTGCTGCACCCCCA...GGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp TCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCAACAGTAGGAGCACAGAAGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SENARKETPGISNSRSTEDGREG*LPVQKP
Trigger: AGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTC...TTCTGTGCTCCTACTGTTGGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp GACAGAACTGAGCTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCGGCTGCCACATAGGTTaGAAAGTGGGAGACACCTGT +
Preference number: 4 (lower is better)
Translates to: DRTELFIRQFSGTGAGQLGCHIG*KVGDTC
Trigger: ACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCC...GAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAGCTCAGTTCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp ACCAAGGAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCC +
Preference number: 4 (lower is better)
Translates to: TKEKECWPEVGLLPLWESRLVSR*CRTAMS
Trigger: GGACATGGCCGTGCGGCAGCACCTGCTCACTAACCT...GCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp CGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGAAGATCTTGTCTAGGTaGTGGGTCAGGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: RHRLHLGPREEPHNLRVVKILSR*WVRASK
Trigger: CTTGGATGCCCTGACCCAGCACCTAGACAAGATCTT...CACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp TGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGTGGGGGCTGTCACCGTaGTTACGAGCATCCACCGTC +
Preference number: 4 (lower is better)
Translates to: WLGCTNWEFPPRRKSVGPWGLSP*LRASTV
Trigger: GACGGTGGATGCTCGTAACCACGGTGACAGCCCCCA...CGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GCCAAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGCTCGTAGCTCATGTCTaGGCTGTGGGGGCTGTCACC +
Preference number: 4 (lower is better)
Translates to: AKILSRCWVRASKFTLHTLVAHV*AVGAVT
Trigger: GGTGACAGCCCCCACAGCCCAGACATGAGCTACGAG...CGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGATCTTGTCTAGGTGCTaGGTCAGGGCATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: GTVCIWARGKSRIISGWWILSRC*VRASKF
Trigger: GAACTTGGATGCCCTGACCCAGCACCTAGACAAGAT...CCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp TTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGAAGGAGAAAGAGTGTTaGCCCGAGGTAGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: FGTVCIWARGKSRIISGWKEKEC*PEVGLL
Trigger: CAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTT...CCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGTCCCTTGACAGGTCCTaGTCTACAATACCATCCGGG +
Preference number: 4 (lower is better)
Translates to: GPREEPHNLRVVAGMHELSLDRS*STIPSG
Trigger: CCCGGATGGTATTGTAGACCAGGACCTGTCAAGGGA...CAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp GGCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTTCTGAAGGGCTGGCCTaGCTGGGTGGCAATCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLAGWQSRRMPGRRLQEFSEGLA*LGGNLG
Trigger: TCCGAGATTGCCACCCAGCCAGGCCAGCCCTTCAGA...AAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp GCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCAACACTGCCGAAGAGCCCGTaGAAAAAGACGACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: AGWQSRRMPGRRLQEFPTLPKSP*KKTTAG
Trigger: CCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAG...TGTTGGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp GCCTGGCTGGGTGGCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCTGGGGCAGAAGGTCCTaGAGGTCCTGGCTCATGATC +
Preference number: 4 (lower is better)
Translates to: AWLGGNLGECQEGDSRNFWGRRS*RSWLMI
Trigger: GATCATGAGCCAGGACCTGCAGGACCTTCTGCCCCA...GAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCCACCCAGCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR GCA 90 bp TCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAGCGGGGCAGCTCATCTaGGATGTTGATGGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: STKEKECWPEVGLLPLWEAGQLI*DVDGPH
Trigger: ATGAGGGCCATCAACATCGCAGATGAGCTGCCCCGC...TTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR GCA 90 bp GCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTAGGACTTGTGCGGTCTGGGGGTaGCACTCTTCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: ARTGSFHQGERVLARGRTCAVWG*HSSLDR
Trigger: CCTGTCAAGGGAAGAGTGGCACCCCCAGACCGCACA...AGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR GCA 90 bp ATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGAAGCGCTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGT +
Preference number: 4 (lower is better)
Translates to: ILSRCWVRASKFTLHTKRLVSRC*RTAMSC
Trigger: ACAGGACATGGCCGTGCGGCAGCACCTGCTCACTAA...GCGCTTCGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp CTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGATCTTGTCTAGGTGCTaGGTCAGGGCATCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LHLGPREEPHNLRVVAGMILSRC*VRASKF
Trigger: GAACTTGGATGCCCTGACCCAGCACCTAGACAAGAT...CATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp ATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGATCAGCGTGGATCCAGTaGCCAGCGTTCGGCACCGTC +
Preference number: 4 (lower is better)
Translates to: IISGWWLGCTNWEFPPRRSAWIQ*PAFGTV
Trigger: GACGGTGCCGAACGCTGGCCACTGGATCCACGCTGA...TCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACCACCCTGAGATTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp TCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCACGGCCATGTCCTGGATGAGCTATGAAGTCCTGTaGGCGGTCAGCGTGGATCCA +
Preference number: 4 (lower is better)
Translates to: STSTRLVSRCCRTAMSWMSYEVL*AVSVDP
Trigger: TGGATCCACGCTGACCGCCCACAGGACTTCATAGCT...CATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp GCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCACCTGTGCTTTCCACTaGGCTGATATCCTCTGTAGT +
Preference number: 4 (lower is better)
Translates to: ASVRHRLHLGPREEPHNLTCAFH*ADILCS
Trigger: ACTACAGAGGATATCAGCCCAGTGGAAAGCACAGGT...GAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR TCA 90 bp CTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGAGGGCAGGTCCTGGCTCATaGTCTCGTAGCTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LGCTNWEFPPRRKSVGPRAGPGS*SRSSCL
Trigger: CAGACATGAGCTACGAGATCATGAGCCAGGACCTGC...CCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR TCA 90 bp GAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCCAAGATGCTCATCTGCGATGTTaGTGGCCCTCATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: EKECWPEVGLLPLWESQDAHLRC*WPSWLP
Trigger: TGGCAGCCATGAGGGCCATCAACATCGCAGATGAGC...ATCTTGGCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp TCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCACGGCCATGTCCTGGATGAAGGAGAAAGAGTGTTaGCCCGAGGTAGGACTCCTG +
Preference number: 4 (lower is better)
Translates to: STSTRLVSRCCRTAMSWMKEKEC*PEVGLL
Trigger: CAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTT...CATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp ATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGAAGCGCCGCATAATCTCAGGGTaGTGGCTGGGATGCACGAAC +
Preference number: 4 (lower is better)
Translates to: ILSRCWVRASKFTLHTKRRIISG*WLGCTN
Trigger: GTTCGTGCATCCCAGCCACCACCCTGAGATTATGCG...GCGCTTCGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GCATCCAAGTTCACCCTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGCGCATAATCTCAGGGTaGTGGCTGGGATGCACGAAC +
Preference number: 4 (lower is better)
Translates to: ASKFTLHTKRPSTSTRLVRIISG*WLGCTN
Trigger: GTTCGTGCATCCCAGCCACCACCCTGAGATTATGCG...CACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAGGGTGAACTTGGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
3UTR CAA 72 bp GCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTaGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: ARTGSFHQGERV*ARGRTPASVGK
Trigger: CTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357419.8
ENST00000412965.5
ENST00000437891.5
CDS-3UTR TCA 90 bp GCCAAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGGTGCCACTCTTCCCTTaGCAGGTCCTGGTCTACAAT +
Preference number: 4 (lower is better)
Translates to: AKILSRCWVRASKFTLHTVPLFP*QVLVYN
Trigger: ATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCAC...CGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CCA 90 bp TCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAATAATCTCAGGGTGGTaGCTGGGATGCACGAACTGG +
Preference number: 4 (lower is better)
Translates to: STKEKECWPEVGLLPLWEIISGW*LGCTNW
Trigger: CCAGTTCGTGCATCCCAGCCACCACCCTGAGATTAT...TTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp CAAGTTCACCCTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGAAGATCTTGTCTAGGTaGTGGGTCAGGGCATCCAAG +
Preference number: 4 (lower is better)
Translates to: QVHPPHEAPVYLYQVSEQKILSR*WVRASK
Trigger: CTTGGATGCCCTGACCCAGCACCTAGACAAGATCTT...CTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAGGGTGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CCA 90 bp TCAGGGTGGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGGACTCCTGCCTCTGTaGGAAAGCCAAGATCTTGTC +
Preference number: 4 (lower is better)
Translates to: SGWWLGCTNWEFPPRRKSGLLPL*ESQDLV
Trigger: GACAAGATCTTGGCTTTCCCACAGAGGCAGGAGTCC...ACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACCACCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CCA 90 bp GGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCGAGGTACTGGGATGCACGAACTaGGAGTTTCCACCAAGGAGA +
Preference number: 4 (lower is better)
Translates to: GMHELGVSTKEKECWPEVLGCTN*EFPPRR
Trigger: TCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAG...TACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR GCA 90 bp GCAATCTCGGAGAATGCCAGGAAGGAGACTCCAGGAATTTCCAACAGTAGGAGCGGCAATCTCGGAGAATaGCAGGAAGGAGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: AISENARKETPGISNSRSGNLGE*QEGDSR
Trigger: CCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGCC...GCTCCTACTGTTGGAAATTCCTGGAGTCTCCTTCCTGGCATTCTCCGAGATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS CCA 90 bp CTGCTGCTGCTGGGTGCGACAGGCACCCTCGCGAAGCTAGGGCCGTaGGGGCCGAGTCCCTCACGCGGGAGCCTCCAGGCTCGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LLLLGATGTLAKLGP*GPSPSRGSLQARVQ
Trigger: CTGGACCCGAGCCTGGAGGCTCCCGCGTGAGGGACTCGGCCCCCACGGCCCTAGCTTCGCGAGGGTGCCTGTCGCACCCAGCAGCAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000497897.5
CDS-3UTR CAA 90 bp GGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCGTTGGGGGAGGTTCCTaGTGCGGTCTGGGGGTGCCA +
Preference number: 5 (lower is better)
Translates to: GRSAWIQWPAFGTVCIWAVGGGS*CGLGVP
Trigger: TGGCACCCCCAGACCGCACAAGGAACCTCCCCCAAC...GGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 90 bp GGGCTGCCTCCCCGTCCAGAAGCCTGTAGGAAAGCGGAAGCGGCCTaGCAGGGGAAGGATCGAGGTCAGAGTCTGAGCCGGCGGAGACGG +
Preference number: 5 (lower is better)
Translates to: GLPPRPEACRKAEAA*QGKDRGQSLSRRRR
Trigger: CCGTCTCCGCCGGCTCAGACTCTGACCTCGATCCTTCCCCTGCCAGGCCGCTTCCGCTTTCCTACAGGCTTCTGGACGGGGAGGCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486114.1
CDS-3UTR CAA 90 bp CAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAGTGGGGGTGCAGCAGTaGGGGGAGGTTCCTTGTGCG +
Preference number: 5 (lower is better)
Translates to: QRGSSGQRSAPSASGPEGVGVQQ*GEVPCA
Trigger: CGCACAAGGAACCTCCCCCAACTGCTGCACCCCCAC...TCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 90 bp TCCCTCACGCGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTTaGAAGCTGTTGGCCGGCTCGCATCTCACAAGGTACGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SLTREPPGSGPAEHA*KLLAGSHLTRYVLP
Trigger: GGGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCGCGTGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS CCA 90 bp GGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTTGCAAGCTGTTaGCCGGCTCGCATCTCACAAGGTACGTCCTCCCCGCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GSLQARVQRSMLASC*PARISQGTSSPRSF
Trigger: GAAGGAGCGCGGGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000468998.1
ENST00000480445.5
CDS GCA 90 bp TTTGCTGCCGAAGAGCCCGTGCAAAAAGACGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCTGTAGGAAAGCGGAAGCGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: FAAEEPVQKDDGREG*LPVQKPVGKRKRPR
Trigger: CCGAGGCCGCTTCCGCTTTCCTACAGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000412965.5
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000497897.5
CDS GCA 90 bp CGAGTCCCTCACGCGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATaGTTGCAAGCTGTTGGCCGGCTCGCATCTCACAAGGTACGTCCT +
Preference number: 5 (lower is better)
Translates to: RVPHAGASRLGSSGA*LQAVGRLASHKVRP
Trigger: AGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCGCGTGAGGGACTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS GCA 90 bp GCTGGGACCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: AGTSVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGTCCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458339.6
CDS GCA 90 bp TTTGCTGCCGAAGAGCCCGTGCAAAAAGACGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCTGTAGGAAAGCGGAAGCGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: FAAEEPVQKDDGREG*LPVQKPVGKRKRPG
Trigger: GCCAGGCCGCTTCCGCTTTCCTACAGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486114.1
CDS GCA 90 bp GGCTCACCCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: GSPSVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGTGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497897.5
CDS GCA 90 bp CCATGTCCCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: PCPSVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGACATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395147.9
ENST00000486114.1
CDS GCA 90 bp CACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGTGGGGGTGCAGCAGTTGGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: HTKRPSTSTRLVSRC*RTAMSCGGAAVGGG
Trigger: ACCTCCCCCAACTGCTGCACCCCCACAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 90 bp CTCCACACGAAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCCTGTGGGGGTGCAGCAGTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: LHTKRPSTSTRLVSR*CRTAMSCGGAAVGG
Trigger: TCCCCCAACTGCTGCACCCCCACAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTTCGTGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 90 bp GAGGCCCCAGACATGGGCGGCTCACCCTCTGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGACGCAGGGCA +
Preference number: 5 (lower is better)
Translates to: EAPDMGGSPSVVPAA*LSFLPCCGQRRRRA
Trigger: TGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGTGAGCCGCCCATGTCTGGGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497897.5
CDS GCA 90 bp GTATCACCCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: VSPSVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGTGATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 90 bp TCCCGGTCATCCCTAGTGAACAAGCAGGCCCCTTCATGGAAAGGGTaGAGGCGCCTAGGCATGGGCCAGCCCCGATGGAGATCCTACGGC +
Preference number: 5 (lower is better)
Translates to: SRSSLVNKQAPSWKG*RRLGMGQPRWRSYG
Trigger: GCCGTAGGATCTCCATCGGGGCTGGCCCATGCCTAGGCGCCTGCACCCTTTCCATGAAGGGGCCTGCTTGTTCACTAGGGATGACCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS CCA 90 bp GTGGTGAGCTCCCGGTCATCCCTAGTGAACAAGCAGGCCCCTTCATaGAAAGGGTGCAGGCGCCTAGGCATGGGCCAGCCCCGATGGAGA +
Preference number: 5 (lower is better)
Translates to: VVSSRSSLVNKQAPS*KGCRRLGMGQPRWR
Trigger: TCTCCATCGGGGCTGGCCCATGCCTAGGCGCCTGCACCCTTTCCATGAAGGGGCCTGCTTGTTCACTAGGGATGACCGGGAGCTCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS-3UTR CAA 90 bp ATCCAGTGGCCAGCGTTCGGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCCAAGGAGAAAGAGTGTaGGCCCGAGGTAGGACTCCT +
Preference number: 5 (lower is better)
Translates to: IQWPAFGTVCIWARGKSRQGERV*ARGRTP
Trigger: AGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTG...GCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCCGAACGCTGGCCACTGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp GTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATACCATCCGGGGCACCTaGGGTGTATCACCCTCTGTA +
Preference number: 5 (lower is better)
Translates to: VLWAVSVDPVASVRHRLHTIRGT*GVSPSV
Trigger: TACAGAGGGTGATACACCCAAGGTGCCCCGGATGGT...ATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 90 bp CTGATATCCTCTGTAGTGCCAGCAGCATGGCTGTCTTTCCTCCCATaGTGTGGCCAACGACGACGCAGGGCACCAGGCCCAGCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: LISSVVPAAWLSFLP*CGQRRRRAPGPAGA
Trigger: TGCCCCAGCTGGGCCTGGTGCCCTGCGTCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGATATCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CAA 90 bp GTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCATGAGTTGAAGTTAGTTTaGCTGCCGAAGAGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: VLWAVSVDPVASVRHRLHELKLV*LPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTC...ATGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp AGCTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCATCTGCGATGAGCTCATCTGCGATGTaGATGGCCCTCATGGCTGCC +
Preference number: 5 (lower is better)
Translates to: SCSSASFRARERGSSSAMSSSAM*MALMAA
Trigger: GGCAGCCATGAGGGCCATCAACATCGCAGATGAGCT...CATCGCAGATGAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CAA 90 bp GACAGAACTGAGCTGTTCATCCGCCAGTTTTCGGGCACGGGAGCGGGGCAGCTCGGGAAAGCCAAGATCTaGTCTAGGTGCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: DRTELFIRQFSGTGAGQLGKAKI*SRCWVR
Trigger: CCTGACCCAGCACCTAGACAAGATCTTGGCTTTCCC...GAGCTGCCCCGCTCCCGTGCCCGAAAACTGGCGGATGAACAGCTCAGTTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CAA 90 bp GCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGGGTGCCACTCTTCCCTaGACAGGTCCTGGTCTACAA +
Preference number: 5 (lower is better)
Translates to: ARGKSRIISGWWLGCTNWGATLP*TGPGLQ
Trigger: TTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACC...CCAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 90 bp GTTCCTTGTGCGGTCTGGGGGTGCCACTCTTCCCTTGACAGGTCCTaGTCTACAATACCATCCGGGGCACCTTGGGTGTATCACCCTCTG +
Preference number: 5 (lower is better)
Translates to: VPCAVWGCHSSLDRS*STIPSGAPWVYHPL
Trigger: CAGAGGGTGATACACCCAAGGTGCCCCGGATGGTATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACCCCCAGACCGCACAAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS-3UTR CAA 90 bp CACCGTCAGCACCTAGGAGGCCCAGATGAAGAACCTGGGGCCACTCTGCCAGAGGAGTTGAAGTTAGTTTaGCTGCCGAAGAGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: HRQHLGGPDEEPGATLPEELKLV*LPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTC...CTCTGGCAGAGTGGCCCCAGGTTCTTCATCTGGGCCTCCTAGGTGCTGACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS-3UTR CAA 90 bp AGTCCTGTGGGCGGTCAGCGTGGATCCAGTGGCCAGCGTTCGGCACCGTCTGCAATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: SPVGGQRGSSGQRSAPSAILAME*KLVLLP
Trigger: CGGCAGCAAAACTAACTTCAACTCCATCGCCAAGAT...TGCAGACGGTGCCGAACGCTGGCCACTGGATCCACGCTGACCGCCCACAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp CCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGCTGGGATGCACGAACTGGGAGGGAAAGCCAAGATCTaGTCTAGGTGCTGGGTCAGG +
Preference number: 5 (lower is better)
Translates to: PREEPHNLRVVAGMHELGGKAKI*SRCWVR
Trigger: CCTGACCCAGCACCTAGACAAGATCTTGGCTTTCCC...TCCCAGTTCGTGCATCCCAGCCACCACCCTGAGATTATGCGGCTCTTCCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp GGCACCGTCTGCATCTGGGCCCGAGGGAAGAGCCGCATAATCTCAGGGTGGTGGATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCG +
Preference number: 5 (lower is better)
Translates to: GTVCIWARGKSRIISGWWILAME*KLVLLP
Trigger: CGGCAGCAAAACTAACTTCAACTCCATCGCCAAGAT...CCACCACCCTGAGATTATGCGGCTCTTCCCTCGGGCCCAGATGCAGACGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp GGTGGCTGGGATGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCTGGCTGCCACATAGGTaGCAAAGTGGGAGACACCTG +
Preference number: 5 (lower is better)
Translates to: GGWDARTGSFHQGERVLAWLPHR*QSGRHL
Trigger: CAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCCA...GGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCATCCCAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CAA 90 bp GCCAAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGCAAGGAGAAAGAGTGTaGGCCCGAGGTAGGACTCCT +
Preference number: 5 (lower is better)
Translates to: AKILSRCWVRASKFTLHTQGERV*ARGRTP
Trigger: AGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTG...CGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS-3UTR CAA 90 bp TCTACCTCTACCAGGTTAGTGAGCAGGTGCTGCCGCACGGCCATGTCCTGGATGTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: STSTRLVSRCCRTAMSWMCWAKI*AMELKL
Trigger: TAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCA...CATCCAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS-3UTR CAA 90 bp AAGGTCCTGCAGGTCCTGGCTCATGATCTCGTAGCTCATGTCTGGGCTGTGGGGTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: KVLQVLAHDLVAHVWAVGCWAKI*AMELKL
Trigger: TAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCA...CCCCACAGCCCAGACATGAGCTACGAGATCATGAGCCAGGACCTGCAGGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474130.1
CDS GCA 90 bp CAGCTCATCTGCGATGTTGATGGCCCTCATGGCTGCCACATAGGTTaGAAAGTGGGAGACACCTGTGCTTTCCACTGGGCTGATATCCTC +
Preference number: 5 (lower is better)
Translates to: QLICDVDGPHGCHIG*KVGDTCAFHWADIL
Trigger: GAGGATATCAGCCCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCCATGAGGGCCATCAACATCGCAGATGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS CCA 90 bp TGGGCTGATATCTACAGCAATGAGACGTTCCACCAGCTCTGGCTGTaGGAGAGAACCGAACTGGGACCAGTCTTAGGCAGACATAGGGAG +
Preference number: 5 (lower is better)
Translates to: WADIYSNETFHQLWL*ERTELGPVLGRHRE
Trigger: CTCCCTATGTCTGCCTAAGACTGGTCCCAGTTCGGTTCTCTCCCACAGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGATATCAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS CCA 90 bp GGCTGCCACATAGGTTGCAAAGTGGGAGACACCTGTGCTTTCCACTaGGCTGATATCTACAGCAATGAGACGTTCCACCAGCTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GCHIGCKVGDTCAFH*ADIYSNETFHQLWL
Trigger: CAGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGATATCAGCCCAGTGGAAAGCACAGGTGTCTCCCACTTTGCAACCTATGTGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS-3UTR CAA 90 bp GCCAAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTA +
Preference number: 5 (lower is better)
Translates to: AKILSRCWVRASKFTLHTCWAKI*AMELKL
Trigger: TAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCA...CGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS CCA 90 bp TTCCACTGGGCTGATATCTACAGCAATGAGACGTTCCACCAGCTCTaGCTGTGGGAGAGAACCGAACTGGGACCAGTCTTAGGCAGACAT +
Preference number: 5 (lower is better)
Translates to: FHWADIYSNETFHQL*LWERTELGPVLGRH
Trigger: ATGTCTGCCTAAGACTGGTCCCAGTTCGGTTCTCTCCCACAGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGATATCAGCCCAGTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS CCA 90 bp AGCTTACTGCACGAACTGGGAGTTTCCACCAAGGAGAAAGAGTGTTaGCCCGAGGTAGGACTCCTGCCTCTGTGGGAAAGCCAAGATCTT +
Preference number: 5 (lower is better)
Translates to: SLLHELGVSTKEKEC*PEVGLLPLWESQDL
Trigger: AAGATCTTGGCTTTCCCACAGAGGCAGGAGTCCTACCTCGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCAGTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462381.1
CDS-3UTR CAA 90 bp AAGATCTTGTCTAGGTGCTGGGTCAGGGCATCCAAGTTCACCCTCCACACGAAGGAGTTGAAGTTAGTTTaGCTGCCGAAGAGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: KILSRCWVRASKFTLHTKELKLV*LPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTC...CTTCGTGTGGAGGGTGAACTTGGATGCCCTGACCCAGCACCTAGACAAGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412965.5
ENST00000437891.5
CDS CCA 72 bp CTGGGTGCGACAGGCACCCTCGCGAAGCTAGGGCCGTaGGGGCCGAGTCCCTCACGCGGGAGCCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: LGATGTLAKLGP*GPSPSRGSLQA
Trigger: AGCCTGGAGGCTCCCGCGTGAGGGACTCGGCCCCCACGGCCCTAGCTTCGCGAGGGTGCCTGTCGCACCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000497897.5
CDS GCA 72 bp GAAGAGCCCGTGCAAAAAGACGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCTCGGCTCGGCGCCCCC +
Preference number: 6 (lower is better)
Translates to: EEPVQKDDGREG*LPVQKPRLGAP
Trigger: GGGGGCGCCGAGCCGAGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTCGTCTTTTTGCACGGGCTCTTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437775.7
CDS GCA 72 bp GAGCAGGTGCTGCCGCACGGCCATGTCCTGTGGGGGTaGAGCAGTTGGGGGAGGTTCCTTGTGCGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: EQVLPHGHVLWG*SSWGRFLVRSG
Trigger: CCCAGACCGCACAAGGAACCTCCCCCAACTGCTGCACCCCCACAGGACATGGCCGTGCGGCAGCACCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CAA 90 bp CGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTTGCAAGCTGTaGGCCGGCTCGCATCTCACAAGGTACGTCCTCCCCGCGCTCCTT +
Preference number: 6 (lower is better)
Translates to: REPPGSGPAEHACKL*AGSHLTRYVLPALL
Trigger: AAGGAGCGCGGGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000468998.1
ENST00000480445.5
CDS CAA 90 bp GTCCCTCACGCGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTaGCAAGCTGTTGGCCGGCTCGCATCTCACAAGGTACGTCCTCCC +
Preference number: 6 (lower is better)
Translates to: VPHAGASRLGSSGAC*QAVGRLASHKVRPP
Trigger: GGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCGCGTGAGGGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS GCA 72 bp CACGCGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATaGTTGCAAGCTGTTGGCCGGCTCGCATCTCACAAG +
Preference number: 6 (lower is better)
Translates to: HAGASRLGSSGA*LQAVGRLASHK
Trigger: CTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS GCA 72 bp CGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTTaGAAGCTGTTGGCCGGCTCGCATCTCACAAGGTAC +
Preference number: 6 (lower is better)
Translates to: REPPGSGPAEHA*KLLAGSHLTRY
Trigger: GTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS CCA 72 bp CAGGCTCGGGTCCAGCGGAGCATGCTTGCAAGCTGTTaGCCGGCTCGCATCTCACAAGGTACGTCCTCCCCG +
Preference number: 6 (lower is better)
Translates to: QARVQRSMLASC*PARISQGTSSP
Trigger: CGGGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS CCA 72 bp CCCCGTCCAGAAGCCTGTAGGAAAGCGGAAGCGGCCTaGCAGGGGAAGGATCGAGGTCAGAGTCTGAGCCGG +
Preference number: 6 (lower is better)
Translates to: PRPEACRKAEAA*QGKDRGQSLSR
Trigger: CCGGCTCAGACTCTGACCTCGATCCTTCCCCTGCCAGGCCGCTTCCGCTTTCCTACAGGCTTCTGGACGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486114.1
CDS CAA 72 bp CCAGGCTCGGGTCCAGCGGAGCATGCTTGCAAGCTGTaGGCCGGCTCGCATCTCACAAGGTACGTCCTCCCC +
Preference number: 6 (lower is better)
Translates to: PGSGPAEHACKL*AGSHLTRYVLP
Trigger: GGGGAGGACGTACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS CAA 72 bp GCGGGAGCCTCCAGGCTCGGGTCCAGCGGAGCATGCTaGCAAGCTGTTGGCCGGCTCGCATCTCACAAGGTA +
Preference number: 6 (lower is better)
Translates to: AGASRLGSSGAC*QAVGRLASHKV
Trigger: TACCTTGTGAGATGCGAGCCGGCCAACAGCTTGCAAGCATGCTCCGCTGGACCCGAGCCTGGAGGCTCCCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357419.9
ENST00000395147.9
ENST00000437775.7
ENST00000458339.6
ENST00000468998.1
ENST00000480445.5
CDS GCA 72 bp GAAGAGCCCGTGCAAAAAGACGACGGCCGGGAGGGCTaGCTCCCCGTCCAGAAGCCTGTAGGAAAGCGGAAG +
Preference number: 6 (lower is better)
Translates to: EEPVQKDDGREG*LPVQKPVGKRK
Trigger: CTTCCGCTTTCCTACAGGCTTCTGGACGGGGAGGCAGCCCTCCCGGCCGTCGTCTTTTTGCACGGGCTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000412965.5
ENST00000437891.5
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000486114.1
ENST00000497897.5
CDS GCA 72 bp CGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCCTCTGTAGTGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RPSTSTRLVSRC*RTAMSLCSASS
Trigger: GCTGCTGGCACTACAGAGGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395147.9
ENST00000486114.1
CDS GCA 72 bp CGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTGCTaGCGCACGGCCATGTCCTGTGGGGGTGCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: RPSTSTRLVSRC*RTAMSCGGAAV
Trigger: AACTGCTGCACCCCCACAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 72 bp AAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCCTGTGGGGGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: KRPSTSTRLVSR*CRTAMSCGGAA
Trigger: TGCTGCACCCCCACAGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 72 bp TCCCGGTCATCCCTAGTGAACAAGCAGGCCCCTTCATaGAAAGGGTGCAGGCGCCTAGGCATGGGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SRSSLVNKQAPS*KGCRRLGMGQP
Trigger: GGGCTGGCCCATGCCTAGGCGCCTGCACCCTTTCCATGAAGGGGCCTGCTTGTTCACTAGGGATGACCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS GCA 72 bp AAGCGCCCGTCTACCTCTACCAGGTTAGTGAGCAGGTaGTGCCGCACGGCCATGTCCCTCTGTAGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: KRPSTSTRLVSR*CRTAMSLCSAS
Trigger: GCTGGCACTACAGAGGGACATGGCCGTGCGGCAGCACCTGCTCACTAACCTGGTAGAGGTAGACGGGCGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395147.9
ENST00000486114.1
CDS GCA 72 bp TCCCTAGTGAACAAGCAGGCCCCTTCATGGAAAGGGTaGAGGCGCCTAGGCATGGGCCAGCCCCGATGGAGA +
Preference number: 6 (lower is better)
Translates to: SLVNKQAPSWKG*RRLGMGQPRWR
Trigger: TCTCCATCGGGGCTGGCCCATGCCTAGGCGCCTGCACCCTTTCCATGAAGGGGCCTGCTTGTTCACTAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS TCA 72 bp GGTTCCTTGTGCGGTCTGGGGGTGCCACTCTTCCCTTaGCAGGTCCTGGTCTACAATACCATCCGGGGCACC +
Preference number: 6 (lower is better)
Translates to: GSLCGLGVPLFP*QVLVYNTIRGT
Trigger: GGTGCCCCGGATGGTATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACCCCCAGACCGCACAAGGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 72 bp AGGGTGGTGGCTGGGACCTCTGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGA +
Preference number: 6 (lower is better)
Translates to: RVVAGTSVVPAA*LSFLPCCGQRR
Trigger: TCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGTCCCAGCCACCACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458339.6
CDS CCA 72 bp GACATGGGCGGCTCACCCTCTGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGA +
Preference number: 6 (lower is better)
Translates to: DMGGSPSVVPAA*LSFLPCCGQRR
Trigger: TCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGTGAGCCGCCCATGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497897.5
CDS CCA 72 bp GCGGTCTGGGGGTGCCACTCTTCCCTTGACAGGTCCTaGTCTACAATACCATCCGGGGCACCTTGGGTGTAT +
Preference number: 6 (lower is better)
Translates to: AVWGCHSSLDRS*STIPSGAPWVY
Trigger: ATACACCCAAGGTGCCCCGGATGGTATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACCCCCAGACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 72 bp CAGCCAAAGGCTTGTAGGGACAGCAGGTCAAAGGTGTaGAGAGCCTGGGGATACACCCTGTGGAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: QPKACRDSRSKV*RAWGYTLWRGR
Trigger: CCTTCCCCTCCACAGGGTGTATCCCCAGGCTCTCCACACCTTTGACCTGCTGTCCCTACAAGCCTTTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468998.1
ENST00000480445.5
CDS CAA 72 bp AGGTTCCTTGTGCGGTCTGGGGGTGCCACTCTTCCCTaGACAGGTCCTGGTCTACAATACCATCCGGGGCAC +
Preference number: 6 (lower is better)
Translates to: RFLVRSGGATLP*TGPGLQYHPGH
Trigger: GTGCCCCGGATGGTATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACCCCCAGACCGCACAAGGAACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CAA 90 bp GCATCCACCGTCAGCACCCTACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: ASTVSTLRPVCWAKI*AMELKLVLLPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGTGCTGACGGTGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222800.8
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000486114.1
CDS CAA 90 bp CCAGCCCCGATGGAGATCCTACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: PAPMEILRPVCWAKI*AMELKLVLLPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGATCTCCATCGGGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468998.1
CDS CAA 90 bp CCTGTCTGCTGGGCCAAGATCTTGGCGATGGAGTTGAAGTTAGTTTaGCTGCCGAAGAGCCCGTGCAAAAAGACGACGGCCGGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: PVCWAKILAMELKLV*LPKSPCKKTTAGRA
Trigger: AGCCCTCCCGGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000486114.1
ENST00000497897.5
CDS CAA 90 bp TACGAGCATCCACCGTCAGCACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGC +
Preference number: 6 (lower is better)
Translates to: YEHPPSARPVCWAKI*AMELKLVLLPKSPC
Trigger: GCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTGCTGACGGTGGATGCTCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357419.9
ENST00000497897.5
CDS GCA 72 bp CAGCAGTTGGGGGAGGTTCCTTGTGCGGTCTGGGGGTaGCACTCTTCCCTTGACAGGTCCTGGTCTACAATA +
Preference number: 6 (lower is better)
Translates to: QQLGEVPCAVWG*HSSLDRSWSTI
Trigger: TATTGTAGACCAGGACCTGTCAAGGGAAGAGTGGCACCCCCAGACCGCACAAGGAACCTCCCCCAACTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS GCA 72 bp CATGGGCCAGCCCCGATGGAGATCCTACGGCCTGTCTaGTGGGCCAAGATCTTGGCGATGGAGTTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: HGPAPMEILRPV*WAKILAMELKL
Trigger: TAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGATCTCCATCGGGGCTGGCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS CCA 72 bp GGGCCAGCCCCGATGGAGATCCTACGGCCTGTCTGCTaGGCCAAGATCTTGGCGATGGAGTTGAAGTTAGTT +
Preference number: 6 (lower is better)
Translates to: GPAPMEILRPVC*AKILAMELKLV
Trigger: AACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGATCTCCATCGGGGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468331.1
ENST00000468998.1
CDS CAA 90 bp CCGTCAGCACGGCCTGTCTGCTGGGCCAAGATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGCAAAAAGACGACG +
Preference number: 6 (lower is better)
Translates to: PSARPVCWAKILAME*KLVLLPKSPCKKTT
Trigger: CGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTGCTGACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357419.9
ENST00000497897.5
CDS TCA 72 bp CTCCTGGAGCCTGAACTTGGTCATCCAACGATCATGTaGGTCCCAGGTTGCCTGCAGGGCCCTCAGGGTATA +
Preference number: 6 (lower is better)
Translates to: LLEPELGHPTIM*VPGCLQGPQGI
Trigger: TATACCCTGAGGGCCCTGCAGGCAACCTGGGACTCACATGATCGTTGGATGACCAAGTTCAGGCTCCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497897.5
CDS CCA 72 bp CGAGCATCCACCGTCAGCACCCTACGGCCTGTCTGCTaGGCCAAGATCTTGGCGATGGAGTTGAAGTTAGTT +
Preference number: 6 (lower is better)
Translates to: RASTVSTLRPVC*AKILAMELKLV
Trigger: AACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGTGCTGACGGTGGATGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222800.8
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000486114.1
CDS CCA 72 bp ACCTTGGGTGTATCACCCTCTGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGA +
Preference number: 6 (lower is better)
Translates to: TLGVSPSVVPAA*LSFLPCCGQRR
Trigger: TCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGGTGATACACCCAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412965.5
CDS CCA 72 bp TCCACTGGGCTGATATCCTCTGTAGTGCCAGCAGCATaGCTGTCTTTCCTCCCATGCTGTGGCCAACGACGA +
Preference number: 6 (lower is better)
Translates to: STGLISSVVPAA*LSFLPCCGQRR
Trigger: TCGTCGTTGGCCACAGCATGGGAGGAAAGACAGCCATGCTGCTGGCACTACAGAGGATATCAGCCCAGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437891.5
CDS CCA 72 bp CCCCTCCTACTACCCAGGCTAGCTTACTGCACGAACTaGGAGTTTCCACCAAGGAGAAAGAGTGTTGGCCCG +
Preference number: 6 (lower is better)
Translates to: PLLLPRLAYCTN*EFPPRRKSVGP
Trigger: CGGGCCAACACTCTTTCTCCTTGGTGGAAACTCCCAGTTCGTGCAGTAAGCTAGCCTGGGTAGTAGGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462381.1
CDS CAA 72 bp CCACCGTCAGCACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: PPSARPVCWAKI*AMELKLVLLPK
Trigger: CTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTGCTGACGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357419.9
ENST00000497897.5
CDS CAA 90 bp AGCACCCTACGGCCTGTCTGCTGGGCCAAGATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGCAAAAAGACGACG +
Preference number: 6 (lower is better)
Translates to: STLRPVCWAKILAME*KLVLLPKSPCKKTT
Trigger: CGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000222800.8
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000486114.1
CDS GCA 72 bp TTACGAGCATCCACCGTCAGCACCCTACGGCCTGTCTaGTGGGCCAAGATCTTGGCGATGGAGTTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: LRASTVSTLRPV*WAKILAMELKL
Trigger: TAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGTGCTGACGGTGGATGCTCGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000222800.8
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000486114.1
CDS CCA 72 bp GGACCAGTCTTAGGCAGACATAGGGAGTCTCAGGCATaGCTCCTGGAGCCTGAACTTGGTCATCCAACGATC +
Preference number: 6 (lower is better)
Translates to: GPVLGRHRESQA*LLEPELGHPTI
Trigger: GATCGTTGGATGACCAAGTTCAGGCTCCAGGAGCCATGCCTGAGACTCCCTATGTCTGCCTAAGACTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS CAA 72 bp CGGCCTGTCTGCTGGGCCAAGATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGCAAA +
Preference number: 6 (lower is better)
Translates to: RPVCWAKILAME*KLVLLPKSPCK
Trigger: TTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000486114.1
ENST00000497897.5
CDS CAA 72 bp GTCAGCACCCTACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: VSTLRPVCWAKI*AMELKLVLLPK
Trigger: CTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000222800.8
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000486114.1
CDS CAA 72 bp GGTCATCCCCTACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: GHPLRPVCWAKI*AMELKLVLLPK
Trigger: CTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGGGATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000474130.1
ENST00000480445.5
CDS CAA 72 bp ATAGGGAGTCTCAGGCATGGCTCCTGGAGCCTGAACTaGGTCATCCAACGATCATGTGAGTCCCAGGTTGCC +
Preference number: 6 (lower is better)
Translates to: IGSLRHGSWSLN*VIQRSCESQVA
Trigger: GGCAACCTGGGACTCACATGATCGTTGGATGACCAAGTTCAGGCTCCAGGAGCCATGCCTGAGACTCCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497897.5
CDS CAA 90 bp GAGATCCTACGGCCTGTCTGCTGGGCCAAGATCTTGGCGATGGAGTaGAAGTTAGTTTTGCTGCCGAAGAGCCCGTGCAAAAAGACGACG +
Preference number: 6 (lower is better)
Translates to: EILRPVCWAKILAME*KLVLLPKSPCKKTT
Trigger: CGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGATCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468998.1
CDS CCA 72 bp ATCTACAGCAATGAGACGTTCCACCAGCTCTGGCTGTaGGAGAGAACCGAACTGGGACCAGTCTTAGGCAGA +
Preference number: 6 (lower is better)
Translates to: IYSNETFHQLWL*ERTELGPVLGR
Trigger: TCTGCCTAAGACTGGTCCCAGTTCGGTTCTCTCCCACAGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS CAA 72 bp TGGGCCAAGATCTTGGCGATGGAGTTGAAGTTAGTTTaGCTGCCGAAGAGCCCGTGCAAAAAGACGACGGCC +
Preference number: 6 (lower is better)
Translates to: WAKILAMELKLV*LPKSPCKKTTA
Trigger: GGCCGTCGTCTTTTTGCACGGGCTCTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000222800.8
ENST00000357419.9
ENST00000395147.9
ENST00000412965.5
ENST00000437775.7
ENST00000437891.5
ENST00000458339.6
ENST00000468998.1
ENST00000474130.1
ENST00000480445.5
ENST00000486114.1
ENST00000497897.5
CDS CCA 72 bp GCTGATATCTACAGCAATGAGACGTTCCACCAGCTCTaGCTGTGGGAGAGAACCGAACTGGGACCAGTCTTA +
Preference number: 6 (lower is better)
Translates to: ADIYSNETFHQL*LWERTELGPVL
Trigger: TAAGACTGGTCCCAGTTCGGTTCTCTCCCACAGCCAGAGCTGGTGGAACGTCTCATTGCTGTAGATATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000462381.1
ENST00000497897.5
CDS CAA 72 bp ATGGAGATCCTACGGCCTGTCTGCTGGGCCAAGATCTaGGCGATGGAGTTGAAGTTAGTTTTGCTGCCGAAG +
Preference number: 6 (lower is better)
Translates to: MEILRPVCWAKI*AMELKLVLLPK
Trigger: CTTCGGCAGCAAAACTAACTTCAACTCCATCGCCAAGATCTTGGCCCAGCAGACAGGCCGTAGGATCTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468998.1