RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCG4 (Homo sapiens)

Ensembl gene IDs: ENSG00000172350

Ensembl transcript IDs: ENST00000524604.5, ENST00000533694.5, ENST00000534402.2, ENST00000615496.4, ENST00000619701.5, ENST00000622721.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCATAGTGGGGAGGGCTGGAGCCCCCACTCCCAGAGCCCAGGCTaGGAGCGCAGTCCGACAGCCAGCCTGTGGAGGAGCCAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: GHSGEGWSPHSQSPG*ERSPTASLWRSQGR
Trigger: CCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGGACTGCGCTCCCAGCCTGGGCTCTGGGAGTGGGGGCTCCAGCCCTCCCCACTATGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR GCA 90 bp GTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATaGGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTC +
Preference number: 1 (lower is better)
Translates to: VPVTPEREGASRDRA*VRGSEKGGLGLPPL
Trigger: GAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp CTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGGAGGGTGCCATaGGCAGGAAGGAGGCAGCAGCCTCCCAGTAGTCTTTGCATGCAG +
Preference number: 1 (lower is better)
Translates to: LESLGLPGRQQRRVP*AGRRQQPPSSLCMQ
Trigger: CTGCATGCAAAGACTACTGGGAGGCTGCTGCCTCCTTCCTGCCCATGGCACCCTCCTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
3UTR GCA 90 bp GGGCCGTGGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTaGTTGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCCTGTGCC +
Preference number: 1 (lower is better)
Translates to: GPWVAVAKANLCPWL*LCWFLNSRDLVPCA
Trigger: GGCACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp GTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCCTGTGCCACCCCTaGCTTGGGAGGAGGGAAGACTTGGGGGTAGACACCTGCAGTTCC +
Preference number: 1 (lower is better)
Translates to: VLVPELQGSSALCHP*LGRREDLGVDTCSS
Trigger: GGAACTGCAGGTGTCTACCCCCAAGTCTTCCCTCCTCCCAAGCCAGGGGTGGCACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp GTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTGCTTGTGTTaGTTCCTGAACTCCAGGGATCTAGTGCCCTGTGCCACCCCTGGC +
Preference number: 1 (lower is better)
Translates to: VAVAKANLCPWLCLC*FLNSRDLVPCATPG
Trigger: GCCAGGGGTGGCACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp GGTAGGGGAGTGAAGATGCCAGCATGGAGCACAAAAGGAGGGCCGTaGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTGCTTG +
Preference number: 1 (lower is better)
Translates to: GRGVKMPAWSTKGGP*VAVAKANLCPWLCL
Trigger: CAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCCTTTTGTGCTCCATGCTGGCATCTTCACTCCCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp AAAGGAGGGCCGTGGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTaGTTGTGCTTGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCC +
Preference number: 1 (lower is better)
Translates to: KGGPWVAVAKANLCP*LCLCWFLNSRDLVP
Trigger: GGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR GCA 90 bp AGCACAAAAGGAGGGCCGTGGGTGGCAGTGGCCAAGGCCAACTTATaGCCGTGGTTGTGCTTGTGTTGGTTCCTGAACTCCAGGGATCTA +
Preference number: 1 (lower is better)
Translates to: STKGGPWVAVAKANL*PWLCLCWFLNSRDL
Trigger: TAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCCTTTTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp CTCTTCCTCTGTGCTGTAGGGGATGGCAAGTGTGTAGGGCTGAGATaGCCTGTTCTCATGTATGTGCCTGTCACTCCGGAGAGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: LFLCAVGDGKCVGLR*PVLMYVPVTPEREG
Trigger: TCCCTCCCTCTCCGGAGTGACAGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTACAGCACAGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 90 bp CACCACCAGCATGCCACCATCACTCTTCCTCTGTGCTGTAGGGGATaGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCC +
Preference number: 1 (lower is better)
Translates to: HHQHATITLPLCCRG*QVCRAEMACSHVCA
Trigger: GGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTACAGCACAGAGGAAGAGTGATGGTGGCATGCTGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTCCAAAGGGCTGGGACTaGGGGCTTCCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTPKGWD*GLPAAG
Trigger: CCCTGCAGCAGGAAGCCCCCAGTCCCAGCCCTTTGG...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR CAA 90 bp GGATCTAGTGCCCTGTGCCACCCCTGGCTTGGGAGGAGGGAAGACTaGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: GSSALCHPWLGRRED*GVDTCSSCRHPGQH
Trigger: GTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTCCCTCCTCCCAAGCCAGGGGTGGCACAGGGCACTAGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGTCCCAGAGCCCAGGCTaGGAGCGCAGTCCGACAGCC +
Preference number: 2 (lower is better)
Translates to: EEATNRINLGRLLGIVGRSQSPG*ERSPTA
Trigger: GGCTGTCGGACTGCGCTCCCAGCCTGGGCTCTGGGA...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR CCA 90 bp AGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCACCAGCGCGAGAAAGGAGGGTTaGGTCTTCCCCCACTCACCC +
Preference number: 2 (lower is better)
Translates to: RVSNMGSPGGGWHCPPTSARKEG*VFPHSP
Trigger: GGGTGAGTGGGGGAAGACCCAACCCTCCTTTCTCGC...GCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CAA 90 bp GGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTGCTTGTGTaGGTTCCTGAACTCCAGGGATCTAGTGCCCTGTGCCACCCCTGG +
Preference number: 2 (lower is better)
Translates to: GGSGQGQLMPVVVLV*VPELQGSSALCHPW
Trigger: CCAGGGGTGGCACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CAA 90 bp CCGTGGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTGCTaGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCCTGTGCCACC +
Preference number: 2 (lower is better)
Translates to: PWVAVAKANLCPWLC*CWFLNSRDLVPCAT
Trigger: GGTGGCACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CAA 90 bp GGAGGGCCGTGGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTaGTGCTTGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GGPWVAVAKANLCPW*CLCWFLNSRDLVPC
Trigger: ACAGGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCCAAAGGGCTGGGACTaGGGGCTTCCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: STSLILRVSNMGSPGGGWPKGWD*GLPAAG
Trigger: CCCTGCAGCAGGAAGCCCCCAGTCCCAGCCCTTTGG...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCCCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATCCCAGAGCCCAGGCTaGGAGCGCAGTCCGACAGCC +
Preference number: 2 (lower is better)
Translates to: ERVGRKLQTASTWEDSWASQSPG*ERSPTA
Trigger: GGCTGTCGGACTGCGCTCCCAGCCTGGGCTCTGGGA...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR CAA 90 bp GCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTaGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACT +
Preference number: 2 (lower is better)
Translates to: AGVGESREEATNRIN*GRLLGIVGRAGAPT
Trigger: AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCCAACACCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR GCA 90 bp TATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTACATTATTGCACAGGTaGCACCAGGCCCTGCCCCCA +
Preference number: 2 (lower is better)
Translates to: YVPVTPEREGASRDRACVTLLHR*HQALPP
Trigger: TGGGGGCAGGGCCTGGTGGCACCTGTGCAATAATGT...AACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCCCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: GESREEATNRINLGRLLGPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR TCA 90 bp AGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCACCAGCCAGGATTGGGAGTGGTaGCCTAGACAGAAAACCCAG +
Preference number: 2 (lower is better)
Translates to: RVSNMGSPGGGWHCPPTSQDWEW*PRQKTQ
Trigger: CTGGGTTTTCTGTCTAGGTCACCACTCCCAATCCTG...GCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGCCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 2 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR CCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGTTACAAACACTTGTGTaGTGGGGACCCCCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQLQTLV*WGPPEG
Trigger: CCCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAA...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCAAAGGGCTGGGACTaGGGGCTTCCTGCTGCAGGG +
Preference number: 2 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHPKGWD*GLPAAG
Trigger: CCCTGCAGCAGGAAGCCCCCAGTCCCAGCCCTTTGG...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAACAGTCCCAAAGGGCTaGGACTGGGGGCTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: ERVGRKLQTASTWEDSWATVPKG*DWGLPA
Trigger: AGCAGGAAGCCCCCAGTCCCAGCCCTTTGGGACTGT...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR CCA 90 bp AGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCACCAGCATTCTCCAGTTCCAGTaGCAGGTGGGAGAGAAACAC +
Preference number: 2 (lower is better)
Translates to: RVSNMGSPGGGWHCPPTSILQFQ*QVGEKH
Trigger: GTGTTTCTCTCCCACCTGCCACTGGAACTGGAGAAT...GCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR GCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGAAACACAGACATTATTaGACAGGTGCCACCAGGCCC +
Preference number: 2 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQKHRHY*TGATRP
Trigger: GGGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTT...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCACAGTCCCAAAGGGCTaGGACTGGGGGCTTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTTVPKG*DWGLPA
Trigger: AGCAGGAAGCCCCCAGTCCCAGCCCTTTGGGACTGT...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
3UTR-3UTR GCA 90 bp AACTTATGCCCGTGGTTGTGCTTGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCGCCACCACCAGCATaGCACCATCACTCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: NLCPWLCLCWFLNSRDLVPPPPA*HHHSSS
Trigger: AGAGGAAGAGTGATGGTGGCATGCTGGTGGTGGCGG...CACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR-3UTR GCA 90 bp AACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCCCTCCCAGTAGTCTTTaGATGCAGGTGTTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: NSNLIAAQFTNTCVVGTPPPSSL*MQVLER
Trigger: TCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG...GGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
3UTR GCA 72 bp ACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATaGGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTT +
Preference number: 3 (lower is better)
Translates to: TPEREGASRDRA*VRGSEKGGLGL
Trigger: AAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR GCA 72 bp TGGCTTGGGAGGAGGGAAGACTTGGGGGTAGACACCTaGAGTTCCTGTAGACACCCTGGGCAGCACCAGCCT +
Preference number: 3 (lower is better)
Translates to: WLGRREDLGVDT*SSCRHPGQHQP
Trigger: AGGCTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTCCCTCCTCCCAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR GCA 72 bp ACCCACCAGGAAAGCCAGACATGCTCTGAGTGTGTCTaGCACCTGGTGCCCAGGGCAGGCTGTTCTGATGCC +
Preference number: 3 (lower is better)
Translates to: THQESQTCSECV*HLVPRAGCSDA
Trigger: GGCATCAGAACAGCCTGCCCTGGGCACCAGGTGGCAGACACACTCAGAGCATGTCTGGCTTTCCTGGTGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 72 bp GTGAAGATGCCAGCATGGAGCACAAAAGGAGGGCCGTaGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGG +
Preference number: 3 (lower is better)
Translates to: VKMPAWSTKGGP*VAVAKANLCPW
Trigger: CCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCCTTTTGTGCTCCATGCTGGCATCTTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 72 bp CAGCATGGAGCACAAAAGGAGGGCCGTGGGTGGCAGTaGCCAAGGCCAACTTATGCCCGTGGTTGTGCTTGT +
Preference number: 3 (lower is better)
Translates to: QHGAQKEGRGWQ*PRPTYARGCAC
Trigger: ACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCCCTCCTTTTGTGCTCCATGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 72 bp TGGGCAGCACCAGCCTTATCCTTAGAGTCTCCAACATaGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCA +
Preference number: 3 (lower is better)
Translates to: WAAPALSLESPT*DPQEEVGTVLP
Trigger: TGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CCA 72 bp CCCCCGCCCAGAATAAAGTGCATTCTCCAGTTCCAGTaGCAGGTGGGAGAGAAACACAGACATTATTGCACA +
Preference number: 3 (lower is better)
Translates to: PPPRIKCILQFQ*QVGEKHRHYCT
Trigger: TGTGCAATAATGTCTGTGTTTCTCTCCCACCTGCCACTGGAACTGGAGAATGCACTTTATTCTGGGCGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp TATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTGGTGCGGGGCCGGGATaGTCAGCGCTGCCACGGACC +
Preference number: 4 (lower is better)
Translates to: YVPVTPEREGASRDRACVGAGPG*SALPRT
Trigger: GGTCCGTGGCAGCGCTGAGCATCCCGGCCCCGCACC...AACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTCCAGCTCCAGGGCGATaGCCAGACGCTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTPAPGR*PDASSA
Trigger: GGCAGAGGAAGCGTCTGGCCATCGCCCTGGAGCTGG...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGGGGGCCACTTTGGTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCCCAGCTCCAGGGCGATaGCCAGACGCTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: EGATLVSCKWGPREPRAPPAPGR*PDASSA
Trigger: GGCAGAGGAAGCGTCTGGCCATCGCCCTGGAGCTGG...GGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGACCAAAGTGGCCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGAGAGCAGGAAGCGGCTaGTCTCAGCGGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAERAGSG*SQRAGP
Trigger: CGGGCCAGCCCGCTGAGACCAGCCGCTTCCTGCTCT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCGTCGGGGTAGCAGGGTaGGTGCAGGGCGGACCAGGG +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGVGVAG*VQGGPG
Trigger: CCCTGGTCCGCCCTGCACTCACCCTGCTACCCCGAC...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615496.4
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGGCCAGACGCTTCCTCTaGCCGCCAGAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAEARRFL*PPESRA
Trigger: AGCCCTGCTCTCTGGCGGGCAGAGGAAGCGTCTGGC...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp TCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTAGGGGCAGCGTGCTCTGAGTGTGTCTaGCACCTGGTGCCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLRRGREHHETVHALGAACSECV*HLVPRA
Trigger: TGCCCTGGGCACCAGGTGGCAGACACACTCAGAGCA...CGCTGCCCCTAACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTGGGCCACCAAGGCGGTaGCGGTGGCCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVGPPRR*RWPGLR
Trigger: TCTCAGCCCTGGCCACCGCCACCGCCTTGGTGGCCC...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCCCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: DRACVRGSEKGGLGLPPLPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...GAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTACAAAAGGAGGGCCGTaGGTGGCAGTGGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTTKGGP*VAVAKA
Trigger: GGCCTTGGCCACTGCCACCCACGGCCCTCCTTTTGT...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTAGACTTGCCAGCCCCTaGGGGGCCCATGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTRLASP*GAHDAN
Trigger: ATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCT...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTGGGGCTCCCCTTACCTaGCTCGGGCTGCGGCACCCG +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPGAPLT*LGLRHP
Trigger: CGGGTGCCGCAGCCCGAGGCAGGTAAGGGGAGCCCC...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGCGGGATGCTCAGCGCTaGCACGGACCGGGGACGGAG +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGERDAQR*HGPGTE
Trigger: CTCCGTCCCCGGTCCGTGGCAGCGCTGAGCATCCCG...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTCTGGTCTCAGCGGGCTaGCCCGTCATCCAGTACACA +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTLVSAG*PVIQYT
Trigger: TGTGTACTGGATGACGGGCCAGCCCGCTGAGACCAG...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGGCCACCAAGGCGGTaGCGGTGGCCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEGPPRR*RWPGLR
Trigger: TCTCAGCCCTGGCCACCGCCACCGCCTTGGTGGCCC...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGGGCCACCAAGGCGGTaGCGGTGGCCAGGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRGPPRR*RWPGLR
Trigger: TCTCAGCCCTGGCCACCGCCACCGCCTTGGTGGCCC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGTCGGAGGATGCTCTGTaGCTCCCGGAACGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQSEDAL*LPERAA
Trigger: CGCTGCCCGTTCCGGGAGCCACAGAGCATCCTCCGA...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GTCAGCCAGGGTCTAGGGGTGGAGAGAAGAGGAGGAGGAGGAAGAGACTTCCAGCCAAAGGGCTGGGACTaGGGGCTTCCTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSQGLGVERRGGGGRDFQPKGWD*GLPAAG
Trigger: CCCTGCAGCAGGAAGCCCCCAGTCCCAGCCCTTTGG...CTGGAAGTCTCTTCCTCCTCCTCCTCTTCTCTCCACCCCTAGACCCTGGCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTACAGTCCCAAAGGGCTaGGACTGGGGGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTTVPKG*DWGLPA
Trigger: AGCAGGAAGCCCCCAGTCCCAGCCCTTTGGGACTGT...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp ATGGCCTGTTCTCATGTATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGTCCCAGAGCCCAGGCTaGGAGCGCAGTCCGACAGCC +
Preference number: 4 (lower is better)
Translates to: MACSHVCACHSGEGGSITSQSPG*ERSPTA
Trigger: GGCTGTCGGACTGCGCTCCCAGCCTGGGCTCTGGGA...CGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATACATGAGAACAGGCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp ACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCACAAACACTTGTGTGGTaGGGACCCCCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TVHALGAARKEGWVFPHSQTLVW*GPPEGA
Trigger: GGCCCCCTCTGGGGGTCCCCACCACACAAGTGTTTG...TGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp AGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTGTCACTCCGGAGAGGGAGGGGCCCTGTGCCACCCCTaGCTTGGGAGGAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: RAEMACSHVCACHSGEGGALCHP*LGRRED
Trigger: GTCTTCCCTCCTCCCAAGCCAGGGGTGGCACAGGGC...CCCTCCCTCTCCGGAGTGACAGGCACATACATGAGAACAGGCCATCTCAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCATGAGCAGCAGTGGCTaGGGAAGGGGTAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DRACVRGSEKGGLGLPPLMSSSG*GRGRGV
Trigger: CACTCCCCTACCCCTTCCCCAGCCACTGCTGCTCAT...GAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGTGGCTTCCAACACCGTaGGGTGCGGCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAEWLPTP*GAAAAC
Trigger: ACATGCTGCTGCCGCACCTCACGGTGTTGGAAGCCA...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGACCGGACACACCACCTaGAAGGGCACGTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAETGHTT*KGTSAM
Trigger: CATGGCTGACGTGCCCTTTCAGGTGGTGTGTCCGGT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGGTTGGGGTCGCGCCCTaGCTCTGCTGGGCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWVGVAP*LCWAVH
Trigger: GTGCACAGCCCAGCAGAGTCAGGGCGCGACCCCAAC...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GAGGGGGCCACTTTGGTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCTCCACCTTCTTCAGGTaGGTGGTCAGCACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: EGATLVSCKWGPREPRAPSTFFR*VVSTGG
Trigger: ACCCCCTGTGCTGACCACGCACCTGAAGAAGGTGGA...GGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGACCAAAGTGGCCCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTCCAGCGCTCGGAGGATaGTCTGTGGCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVPALGG*SVAPGT
Trigger: CGTTCCGGGAGCCACAGAGCATCCTCCGAGCGCTGG...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGAGGGCTGTCCTCGTGTaGGAGCACGACATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQRAVLV*EHDIRP
Trigger: GGGCCTGATGTCGTGCTCCCACACGAGGACAGCCCT...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAGAGCAGGAAGCGGCTaGTCTCAGCGGGCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGRAGSG*SQRAGP
Trigger: CGGGCCAGCCCGCTGAGACCAGCCGCTTCCTGCTCT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTCTGGGCCCACAAAAGTaGCCACCTGTAGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTLGPQK*PPVGSW
Trigger: CCAACTCCCTACAGGTGGCCACTTTTGTGGGCCCAG...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTCCAAAGGGCTGGGACTaGGGGCTTCCTGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVPKGWD*GLPAAG
Trigger: CCCTGCAGCAGGAAGCCCCCAGTCCCAGCCCTTTGG...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTAGCGCTGGGCTTCAGTaGTGTGGTTCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTSAGLQ*CGSPPS
Trigger: AGAAGGTGGAGAACCACATCACTGAAGCCCAGCGCT...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGGGCCCAGCCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGCCCCTGAGGGGCCCATaGTGCCAATCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: QGPALELQPYSSPVYKHLPLRGP*CQSAPG
Trigger: GCCGGGAGCTGATTGGCATCATGGGCCCCTCAGGGG...CAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGCCAGACGCTTCCTCTaGCCGCCAGAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGARRFL*PPESRA
Trigger: AGCCCTGCTCTCTGGCGGGCAGAGGAAGCGTCTGGC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGACATTATTGCACAGGTaGCACCAGGCCCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAETLLHR*HQALPP
Trigger: TGGGGGCAGGGCCTGGTGGCACCTGTGCAATAATGT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp TATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTCCTTCTTCAGGTGCGTaGTCAGCACAGGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: YVPVTPEREGASRDRACVPSSGA*SAQGVP
Trigger: CGGAACCCCCTGTGCTGACCACGCACCTGAAGAAGG...AACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGGAGCGCTTGGGTAGGTaGGAGAAGCGCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQERLGR*EKRWAS
Trigger: TGAAGCCCAGCGCTTCTCCCACCTACCCAAGCGCTC...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GTCAGCCAGGGTCTAGGGGTGGAGAGAAGAGGAGGAGGAGGAAGAGACTTCCAGCCGGGTTGTGGTAGGTaGGGCAATGCAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: VSQGLGVERRGGGGRDFQPGCGR*GNASRV
Trigger: GACTCGGCTTGCATTGCCCCACCTACCACAACCCGG...CTGGAAGTCTCTTCCTCCTCCTCCTCTTCTCTCCACCCCTAGACCCTGGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGCCAAGGCGGTGGCGGTaGCCAGGGCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEPRRWR*PGLRRA
Trigger: TGCTCTTCTCAGCCCTGGCCACCGCCACCGCCTTGG...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCAGCAGCCCCAAAGATTaGGCCACCAAGGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGSSPKD*ATKAVA
Trigger: CGCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCT...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGTCGGAGGATGCTCTGTaGCTCCCGGAACGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGESEDAL*LPERAA
Trigger: CGCTGCCCGTTCCGGGAGCCACAGAGCATCCTCCGA...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGCCGCTTCCCAGAGCCTaGTCCCGGACGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRPLPRA*SRTLCP
Trigger: AGGACACAGCGTCCGGGACCAGGCTCTGGGAAGCGG...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp ATGGCCTGTTCTCATGTATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGATGGTGAGAGGCGGTTaGGGTCGCGCCCTGACTCTG +
Preference number: 4 (lower is better)
Translates to: MACSHVCACHSGEGGSITMVRGG*GRALTL
Trigger: CAGAGTCAGGGCGCGACCCCAACCGCCTCTCACCAT...CGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATACATGAGAACAGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGAGCGCTGGGCTTCAGTaGTGTGGTTCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAESAGLQ*CGSPPS
Trigger: AGAAGGTGGAGAACCACATCACTGAAGCCCAGCGCT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAACCCCTGAGGGGCCCATaGTGCCAATCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQPLRGP*CQSAPG
Trigger: GCCGGGAGCTGATTGGCATCATGGGCCCCTCAGGGG...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp AGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCACCAGCGTGCCAGGGACTTCATaGGGGACACCACTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: RVSNMGSPGGGWHCPPTSVPGTS*GTPLGN
Trigger: GTTTCCAAGTGGTGTCCCTCATGAAGTCCCTGGCAC...GCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GAGGGGGCCACTTTGGTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAAGCCTCTATCTCTCTaGCTTGACCCGGTAACGCAG +
Preference number: 4 (lower is better)
Translates to: EGATLVSCKWGPREPRAPKPLSL*LDPVTQ
Trigger: CTGCGTTACCGGGTCAAGTCAGAGAGATAGAGGCTT...GGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGACCAAAGTGGCCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp ACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCAAAGCCAGACATGCTCTaGGTGTGTCTGCCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TVHALGAARKEGWVFPHSKPDML*VCLPPG
Trigger: ACCAGGTGGCAGACACACTCAGAGCATGTCTGGCTT...TGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp TCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTAGGGGCAGCGAAATCAGAAGCAGAATaGGCCTGGACCCACCAGGAA +
Preference number: 4 (lower is better)
Translates to: SLRRGREHHETVHALGAAKSEAE*AWTHQE
Trigger: TTCCTGGTGGGTCCAGGCTCATTCTGCTTCTGATTT...CGCTGCCCCTAACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGTGTAGCAGGACATCTTaGGGAAGGTCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAECSRTS*GRSSAP
Trigger: GGGAGCTGAGGACCTTCCGCAAGATGTCCTGCTACA...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTGGTCTCCTCGCTCCATaGCATAGATCGTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTGLLAP*HRSSGS
Trigger: TGATCCTGACGATCTATGGCATGGAGCGAGGAGACC...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCACCAGCGCTCGGAGGATaGTCTGTGGCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWAPALGG*SVAPGT
Trigger: CGTTCCGGGAGCCACAGAGCATCCTCCGAGCGCTGG...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGACTCTGCTGGGCTGTaGACACCCGCTTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEDSAGL*TPASQS
Trigger: GCTCTGGGAAGCGGGTGTGCACAGCCCAGCAGAGTC...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCCCTTCTTCAGGTGCGTaGTCAGCACAGGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGPSSGA*SAQGVP
Trigger: CGGAACCCCCTGTGCTGACCACGCACCTGAAGAAGG...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCCACGGCTGAGCGCTTaGGTAGGTGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKPRLSA*VGGRSA
Trigger: AGCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGG...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp ACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCAGGTCCTCAGCTCCCGTaGCCTTCCATTAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: TVHALGAARKEGWVFPHSGPQLP*PSINQD
Trigger: ATCCTGGTTAATGGAAGGCCACGGGAGCTGAGGACC...TGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAGGGCTGTCCTCGTGTaGGAGCACGACATCAGGCCC +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGRAVLV*EHDIRP
Trigger: GGGCCTGATGTCGTGCTCCCACACGAGGACAGCCCT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCCTGGTCTCAGCGGGCTaGCCCGTCATCCAGTACACA +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGLVSAG*PVIQYT
Trigger: TGTGTACTGGATGACGGGCCAGCCCGCTGAGACCAG...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAGCAGCCCCAAAGATTaGGCCACCAAGGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGSSPKD*ATKAVA
Trigger: CGCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GTCAGCCAGGGTCTAGGGGTGGAGAGAAGAGGAGGAGGAGGAAGAGACTTCCAGGACATGAACCGTAGGTaGGTCAGGACCGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VSQGLGVERRGGGGRDFQDMNRR*VRTVSL
Trigger: CAGGGACACGGTCCTGACCCACCTACGGTTCATGTC...CTGGAAGTCTCTTCCTCCTCCTCCTCTTCTCTCCACCCCTAGACCCTGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATCGGAGGATGCTCTGTaGCTCCCGGAACGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWASEDAL*LPERAA
Trigger: CGCTGCCCGTTCCGGGAGCCACAGAGCATCCTCCGA...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAATCCCAGAGCCCAGGCTaGGAGCGCAGTCCGACAGCC +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQSQSPG*ERSPTA
Trigger: GGCTGTCGGACTGCGCTCCCAGCCTGGGCTCTGGGA...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGGGCCGTGGGTGGCAGTaGCCAAGGCCAACTTATGCC +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWGRGWQ*PRPTYA
Trigger: GGCATAAGTTGGCCTTGGCCACTGCCACCCACGGCC...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCTGAGGGGCCCATaGTGCCAATCAGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDPLRGP*CQSAPG
Trigger: GCCGGGAGCTGATTGGCATCATGGGCCCCTCAGGGG...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGAGACTTGCCAGCCCCTaGGGGGCCCATGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKRLASP*GAHDAN
Trigger: ATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCT...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAGACTTGCCAGCCCCTaGGGGGCCCATGATGCCAAT +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGRLASP*GAHDAN
Trigger: ATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGACCGGACACACCACCTaGAAGGGCACGTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKTGHTT*KGTSAM
Trigger: CATGGCTGACGTGCCCTTTCAGGTGGTGTGTCCGGT...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGTCAGGACCGTGTCCCTaGGGATGGACAGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRSGPCP*GWTGRS
Trigger: GGACCTTCCTGTCCATCCTCAGGGACACGGTCCTGA...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGTCAGGACCGTGTCCCTaGGGATGGACAGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGESGPCP*GWTGRS
Trigger: GGACCTTCCTGTCCATCCTCAGGGACACGGTCCTGA...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAGGGGGCCACTTTGGTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCCCTCAAAGCCATACCTaGCATAGGAGAGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: EGATLVSCKWGPREPRAPPQSHT*HRRDRS
Trigger: GCTCCTATCTCTCCTATGTCAGGTATGGCTTTGAGG...GGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGACCAAAGTGGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTTCCACCTTCTTCAGGTaGGTGGTCAGCACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVSTFFR*VVSTGG
Trigger: ACCCCCTGTGCTGACCACGCACCTGAAGAAGGTGGA...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCCCATTAACCAGGATCTaGCCCTTCATTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: DRACVRGSEKGGLGLPPLPLTRI*PFIPDS
Trigger: GGAGTCTGGAATGAAGGGGCAGATCCTGGTTAATGG...GAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GAGGGGGCCACTTTGGTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCTCCTTCTTCACCTCCTaGTTCTCACTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: EGATLVSCKWGPREPRAPSFFTS*FSLSFR
Trigger: CCTGAAGCTGAGTGAGAAGCAGGAGGTGAAGAAGGA...GGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGACCAAAGTGGCCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAAGCCAGACGCTTCCTCTaGCCGCCAGAGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQARRFL*PPESRA
Trigger: AGCCCTGCTCTCTGGCGGGCAGAGGAAGCGTCTGGC...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAACCAGCGCTCGGAGGATaGTCTGTGGCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQPALGG*SVAPGT
Trigger: CGTTCCGGGAGCCACAGAGCATCCTCCGAGCGCTGG...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp ACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCACTGTTCTCATGTATGTaGCTGTCACTCCGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: TVHALGAARKEGWVFPHSLFSCM*LSLRRG
Trigger: CCCTCTCCGGAGTGACAGGCACATACATGAGAACAG...TGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp CCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGATCACGCCGCCGACCTaGAAGGGGAGGGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: PWNSNLIAAQFTNTCVVGITPPT*KGRACS
Trigger: TGAGCAGGCCCTCCCCTTGCAGGTCGGCGGCGTGAT...CCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGAGCGCTTGGGTAGGTaGGAGAAGCGCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGERLGR*EKRWAS
Trigger: TGAAGCCCAGCGCTTCTCCCACCTACCCAAGCGCTC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCCGGGTTGTGGTAGGTaGGGCAATGCAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKPGCGR*GNASRV
Trigger: GACTCGGCTTGCATTGCCCCACCTACCACAACCCGG...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCCCAGCTCCAGGGCGATaGCCAGACGCTTCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: NSNLIAAQFTNTCVVGTPPAPGR*PDASSA
Trigger: GGCAGAGGAAGCGTCTGGCCATCGCCCTGGAGCTGG...GGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGCTGGTCTCAGCGGGCTaGCCCGTCATCCAGTACACA +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGELVSAG*PVIQYT
Trigger: TGTGTACTGGATGACGGGCCAGCCCGCTGAGACCAG...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGAGCAGCCCCAAAGATTaGGCCACCAAGGCGGTGGCG +
Preference number: 4 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGSSPKD*ATKAVA
Trigger: CGCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCT...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGGCGAGAAAGGAGGGTTaGGTCTTCCCCCACTCACCC +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWARKEG*VFPHSP
Trigger: GGGTGAGTGGGGGAAGACCCAACCCTCCTTTCTCGC...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGTCCCCAGGAGGAGGTTaGCACTGTCCTCCCACCAGC +
Preference number: 4 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGSPGGG*HCPPTS
Trigger: GCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGA...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTGTGCCAGGGACTTCATaGGGGACACCACTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVVPGTS*GTPLGN
Trigger: GTTTCCAAGTGGTGTCCCTCATGAAGTCCCTGGCAC...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGGATGCAGAACTGTGTaGGGGTGCTGGTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGGCRTV*GCWWQR
Trigger: CCTTTGCCACCAGCACCCTCACACAGTTCTGCATCC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGGGCCCAGCCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGGCTTCCAACACCGTaGGGTGCGGCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: QGPALELQPYSSPVYKHLWLPTP*GAAAAC
Trigger: ACATGCTGCTGCCGCACCTCACGGTGTTGGAAGCCA...CAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp AGTGGCAGGTGGGAGAGAAACACAGACATTATTGCACAGGTGCCACCAGGCCCTGGCAGCCGGTGTTGTTaGAGACCTTGCTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: SGRWERNTDIIAQVPPGPGSRCC*RPCWHR
Trigger: ACGATGCCAGCAAGGTCTTCAACAACACCGGCTGCC...AGGGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTTCTCTCCCACCTGCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAACCGGACACACCACCTaGAAGGGCACGTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWATGHTT*KGTSAM
Trigger: CATGGCTGACGTGCCCTTTCAGGTGGTGTGTCCGGT...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGTCAGGACCGTGTCCCTaGGGATGGACAGGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGSGPCP*GWTGRS
Trigger: GGACCTTCCTGTCCATCCTCAGGGACACGGTCCTGA...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGTCTATCTCTCTGACTTaGCCCGGTAACGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAESISLT*PGNAAQ
Trigger: TTGTGCTGCGTTACCGGGTCAAGTCAGAGAGATAGA...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGTCCTTCTTCACCTCCTaGTTCTCACTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAESFFTS*FSLSFR
Trigger: CCTGAAGCTGAGTGAGAAGCAGGAGGTGAAGAAGGA...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCCGACATCAGGCCCAGTaGCGTCAGGATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGRHQAQ*RQDLCH
Trigger: GTGACAGAGATCCTGACGGCACTGGGCCTGATGTCG...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGTCCAGTACACAATGCTaGAGTAGACCACCGGACACA +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAESSTQC*SRPPDT
Trigger: TGTGTCCGGTGGTCTACTGCAGCATTGTGTACTGGA...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGCCTTCTTCAGGTGCGTaGTCAGCACAGGGGGTTCCG +
Preference number: 4 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGPSSGA*SAQGVP
Trigger: CGGAACCCCCTGTGCTGACCACGCACCTGAAGAAGG...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCAGGTGGGAGAAGCGCTaGGCTTCAGTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGRWEKR*ASVMWF
Trigger: GAACCACATCACTGAAGCCCAGCGCTTCTCCCACCT...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTGGTCCTCAGCTCCCGTaGCCTTCCATTAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVGPQLP*PSINQD
Trigger: ATCCTGGTTAATGGAAGGCCACGGGAGCTGAGGACC...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCACTGTCCTCCCACCAGCACATGAGGGACACCACTTaGAAACAAGAGGCGCTATCC +
Preference number: 4 (lower is better)
Translates to: SLQHGIPRRRLALSSHQHMRDTT*KQEALS
Trigger: GGATAGCGCCTCTTGTTTCCAAGTGGTGTCCCTCAT...GTGCTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGATCCCATGTTGGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGCTGGTGGCAAAGGTGTaGCTTTCAATGGGATCCACT +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAELVAKV*LSMGST
Trigger: AGTGGATCCCATTGAAAGCCACACCTTTGCCACCAG...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCAAGGCGGTGGCGGTaGCCAGGGCTGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHPRRWR*PGLRRA
Trigger: TGCTCTTCTCAGCCCTGGCCACCGCCACCGCCTTGG...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGACATGAACCGTAGGTaGGTCAGGACCGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGDMNRR*VRTVSL
Trigger: CAGGGACACGGTCCTGACCCACCTACGGTTCATGTC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTGGGCCCACAAAAGTaGCCACCTGTAGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKLGPQK*PPVGSW
Trigger: CCAACTCCCTACAGGTGGCCACTTTTGTGGGCCCAG...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAACCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCAGAGGGGGCCACTTTaGTCAGTTGTAAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWQRGPL*SVVSGA
Trigger: GGCCCCACTTACAACTGACCAAAGTGGCCCCCTCTG...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGCAGAGGGGGCCACTTTaGTCAGTTGTAAGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEQRGPL*SVVSGA
Trigger: GGCCCCACTTACAACTGACCAAAGTGGCCCCCTCTG...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGATTCTCCAGTTCCAGTaGCAGGTGGGAGAGAAACAC +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAEILQFQ*QVGEKH
Trigger: GTGTTTCTCTCCCACCTGCCACTGGAACTGGAGAAT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCTGTGTAGGGCTGAGATaGCCTGTTCTCATGTATGTG +
Preference number: 4 (lower is better)
Translates to: DRACVRGSEKGGLGLPPLCVGLR*PVLMYV
Trigger: CACATACATGAGAACAGGCCATCTCAGCCCTACACA...GAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACAGGGCCTGCTCAGTTTaGGGCAGACCACCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDRACSV*GRPPSP
Trigger: CGGGCTCGGTGGTCTGCCCCAAACTGAGCAGGCCCT...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622721.1
3UTR CAA 72 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTaGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GESREEATNRIN*GRLLGIVGRAG
Trigger: TCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
3UTR CAA 72 bp GCAGTGGCCAAGGCCAACTTATGCCCGTGGTTGTGCTaGTGTTGGTTCCTGAACTCCAGGGATCTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVAKANLCPWLC*CWFLNSRDLVP
Trigger: GGGCACTAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGAGCGCTGGGCTTCAGTaGTGTGGTTCTCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGESAGLQ*CGSPPS
Trigger: AGAAGGTGGAGAACCACATCACTGAAGCCCAGCGCT...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTGCGGCAGAATTTACCTaGGAGGCACTTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVAAEFT*EALEKG
Trigger: ACCCTTCTCAAGTGCCTCTCAGGTAAATTCTGCCGC...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGTGCCAGGGACTTCATaGGGGACACCACTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGVPGTS*GTPLGN
Trigger: GTTTCCAAGTGGTGTCCCTCATGAAGTCCCTGGCAC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAATGGCTTCCAACACCGTaGGGTGCGGCAGCAGCATGT +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQWLPTP*GAAAAC
Trigger: ACATGCTGCTGCCGCACCTCACGGTGTTGGAAGCCA...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAGGCAGCCGGTGTTGTTaGAGACCTTGCTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWAGSRCC*RPCWHR
Trigger: ACGATGCCAGCAAGGTCTTCAACAACACCGGCTGCC...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTTCCACCTTCTTCAGGTaGGTGGTCAGCACAGGGGGT +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPSTFFR*VVSTGG
Trigger: ACCCCCTGTGCTGACCACGCACCTGAAGAAGGTGGA...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCTGTAGCAGGACATCTTaGGGAAGGTCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGCSRTS*GRSSAP
Trigger: GGGAGCTGAGGACCTTCCGCAAGATGTCCTGCTACA...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCGCACAGCCCATTCTaGACAGCCCTGAACAACATG +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRAHSPF*TALNNM
Trigger: CATGTTGTTCAGGGCTGTGCAGAATGGGCTGTGCGC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGCGCACAGCCCATTCTaGACAGCCCTGAACAACATG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGAHSPF*TALNNM
Trigger: CATGTTGTTCAGGGCTGTGCAGAATGGGCTGTGCGC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp TATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTTCCAGTACACAATGCTaGAGTAGACCACCGGACACA +
Preference number: 4 (lower is better)
Translates to: YVPVTPEREGASRDRACVSSTQC*SRPPDT
Trigger: TGTGTCCGGTGGTCTACTGCAGCATTGTGTACTGGA...AACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCGGGCTAGGAAGAAGATaGCCAAGACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGGLGRR*PRPGSP
Trigger: TGGACTTCCTGGTCTTGGGCATCTTCTTCCTAGCCC...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTGGGCTAGGAAGAAGATaGCCAAGACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVGLGRR*PRPGSP
Trigger: TGGACTTCCTGGTCTTGGGCATCTTCTTCCTAGCCC...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGTCACGAGACCGTGCATaGGTTAGGGGCAGCGAGAAA +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKSRDRA*VRGSEK
Trigger: TTTCTCGCTGCCCCTAACGCATGCACGGTCTCGTGA...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp CCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGTGCAAGGGGAGGGCCTaGTCAGTTTGGGGCAGACCA +
Preference number: 4 (lower is better)
Translates to: PWNSNLIAAQFTNTCVVGCKGRA*SVWGRP
Trigger: TGGTCTGCCCCAAACTGAGCAGGCCCTCCCCTTGCA...CCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCCACGGCTGAGCGCTTaGGTAGGTGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTPRLSA*VGGRSA
Trigger: AGCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGG...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCCCGGGTTGTGGTAGGTaGGGCAATGCAAGCCGAGTC +
Preference number: 4 (lower is better)
Translates to: NSNLIAAQFTNTCVVGTPPGCGR*GNASRV
Trigger: GACTCGGCTTGCATTGCCCCACCTACCACAACCCGG...GGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGAAGGTGAGCACAGTTaGCATGAGGGCGGCGAACAT +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEEGEHS*HEGGEH
Trigger: ATGTTCGCCGCCCTCATGCCAACTGTGCTCACCTTC...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCGACAGCCAGCCTGTaGAGGAGCCAAGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHPTASL*RSQGRR
Trigger: TCTCCTCCCTTGGCTCCTCCACAGGCTGGCTGTCGG...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCAAACACTTGTGTGGTaGGGACCCCCAGAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDQTLVW*GPPEGA
Trigger: GGCCCCCTCTGGGGGTCCCCACCACACAAGTGTTTG...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCTTACAAACACTTGTGTaGTGGGGACCCCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGLQTLV*WGPPEG
Trigger: CCCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAA...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTTCCCACAAATACAACTaGCATCCCTGTGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTSHKYN*HPCVIG
Trigger: TCCTATCACACAGGGATGCCAGTTGTATTTGTGGGA...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
3UTR CAA 72 bp TGGGTGGCAGTGGCCAAGGCCAACTTATGCCCGTGGTaGTGCTTGTGTTGGTTCCTGAACTCCAGGGATCTA +
Preference number: 4 (lower is better)
Translates to: WVAVAKANLCPW*CLCWFLNSRDL
Trigger: TAGATCCCTGGAGTTCAGGAACCAACACAAGCACAACCACGGGCATAAGTTGGCCTTGGCCACTGCCACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCGGCAGAATTTACCTaGGAGGCACTTGAGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRAAEFT*EALEKG
Trigger: ACCCTTCTCAAGTGCCTCTCAGGTAAATTCTGCCGC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCATTCTGCACAGCCCTaGACAACATGGGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKHSAQP*TTWGSG
Trigger: ACCTGAACCCCATGTTGTTCAGGGCTGTGCAGAATG...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAAGGATGCAGAACTGTGTaGGGGTGCTGGTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQGCRTV*GCWWQR
Trigger: CCTTTGCCACCAGCACCCTCACACAGTTCTGCATCC...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTCCTCAAAGCCATACCTaGCATAGGAGAGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVPQSHT*HRRDRS
Trigger: GCTCCTATCTCTCCTATGTCAGGTATGGCTTTGAGG...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTTCTATCTCTCTGACTTaGCCCGGTAACGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVSISLT*PGNAAQ
Trigger: TTGTGCTGCGTTACCGGGTCAAGTCAGAGAGATAGA...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGAAGCCTCTATCTCTCTaGCTTGACCCGGTAACGCAG +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKKPLSL*LDPVTQ
Trigger: CTGCGTTACCGGGTCAAGTCAGAGAGATAGAGGCTT...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAAATCCCACAAATACAACTGGCATCCCTGTGTGATAGGAAGAATCTGTGGCAGAGACGGCAAGGATGGTaGGAGGCGGTTGGGGTCGCG +
Preference number: 4 (lower is better)
Translates to: EIPQIQLASLCDRKNLWQRRQGW*EAVGVA
Trigger: CGCGACCCCAACCGCCTCTCACCATCCTTGCCGTCT...CTGCCACAGATTCTTCCTATCACACAGGGATGCCAGTTGTATTTGTGGGATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCCCATTAACCAGGATCTaGCCCTTCATTCCAGACTCC +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGPLTRI*PFIPDS
Trigger: GGAGTCTGGAATGAAGGGGCAGATCCTGGTTAATGG...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGGTCTCCTCGCTCCATaGCATAGATCGTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRGLLAP*HRSSGS
Trigger: TGATCCTGACGATCTATGGCATGGAGCGAGGAGACC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGGGCTAGGAAGAAGATaGCCAAGACCAGGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRGLGRR*PRPGSP
Trigger: TGGACTTCCTGGTCTTGGGCATCTTCTTCCTAGCCC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCCCTCCCAGTAGTCTTTaGATGCAGGTGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGPPSSL*MQVLER
Trigger: TCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGTTGGGGGTAGACACCTaGAGTTCCTGTAGACACCCT +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGELGVDT*SSCRHP
Trigger: AGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAA...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGTTATGCCCGTGGTTGTaGTTGTGTTGGTTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQLCPWL*LCWFLN
Trigger: GTTCAGGAACCAACACAAGCACAACCACGGGCATAA...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGCAGGAAAGCCAGACATaGTCTGAGTGTGTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWQESQT*SECVCH
Trigger: GTGGCAGACACACTCAGAGCATGTCTGGCTTTCCTG...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTAGGTGGGAGAAGCGCTaGGCTTCAGTGATGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPRWEKR*ASVMWF
Trigger: GAACCACATCACTGAAGCCCAGCGCTTCTCCCACCT...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTATGAGGGACACCACTTaGAAACAAGAGGCGCTATCC +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVMRDTT*KQEALS
Trigger: GGATAGCGCCTCTTGTTTCCAAGTGGTGTCCCTCAT...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGAGGTGTGGCTTTCAATaGGATCCACTTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGERCGFQ*DPLPED
Trigger: GTCCTCCGGAAGTGGATCCCATTGAAAGCCACACCT...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGTGGCAGGTGGGAGAGAAACACAGACATTATTGCACAGGTGCCACCAGGCCCTAGGTGTGGCTTTCAATaGGATCCACTTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SGRWERNTDIIAQVPPGPRCGFQ*DPLPED
Trigger: GTCCTCCGGAAGTGGATCCCATTGAAAGCCACACCT...AGGGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTTCTCTCCCACCTGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTCTGGTGGCAAAGGTGTaGCTTTCAATGGGATCCACT +
Preference number: 4 (lower is better)
Translates to: PREERIAPPGTSAQVYKVLVAKV*LSMGST
Trigger: AGTGGATCCCATTGAAAGCCACACCTTTGCCACCAG...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGACGCCAATAACCACGTaGGACATGAACCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGETPITT*DMNRRW
Trigger: CCACCTACGGTTCATGTCCCACGTGGTTATTGGCGT...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGACGCCAATAACCACGTaGGACATGAACCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRTPITT*DMNRRW
Trigger: CCACCTACGGTTCATGTCCCACGTGGTTATTGGCGT...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTACCAGGGCCCAGCCCTaGAACTCCAACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPTRAQP*NSNLIA
Trigger: TGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTGGT...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAACCAGGGCCCAGCCCTaGAACTCCAACCTTATAGCA +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWATRAQP*NSNLIA
Trigger: TGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTGGT...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTCATTCTGCACAGCCCTaGACAACATGGGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPHSAQP*TTWGSG
Trigger: ACCTGAACCCCATGTTGTTCAGGGCTGTGCAGAATG...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGCATTCTGCACAGCCCTaGACAACATGGGGTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGHSAQP*TTWGSG
Trigger: ACCTGAACCCCATGTTGTTCAGGGCTGTGCAGAATG...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCGGATGCAGAACTGTGTaGGGGTGCTGGTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTGCRTV*GCWWQR
Trigger: CCTTTGCCACCAGCACCCTCACACAGTTCTGCATCC...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACGGCAGCCGGTGTTGTTaGAGACCTTGCTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHGSRCC*RPCWHR
Trigger: ACGATGCCAGCAAGGTCTTCAACAACACCGGCTGCC...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGTCTATCTCTCTGACTTaGCCCGGTAACGCAGCACAA +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRSISLT*PGNAAQ
Trigger: TTGTGCTGCGTTACCGGGTCAAGTCAGAGAGATAGA...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GTAGGGGATGGCAAGTGTGTAGGGCTGAGATGGCCTGTTCTCATGTATGTGCCTAAGCCTCTATCTCTCTaGCTTGACCCGGTAACGCAG +
Preference number: 4 (lower is better)
Translates to: VGDGKCVGLRWPVLMYVPKPLSL*LDPVTQ
Trigger: CTGCGTTACCGGGTCAAGTCAGAGAGATAGAGGCTT...AGGCACATACATGAGAACAGGCCATCTCAGCCCTACACACTTGCCATCCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGACATGGACAGAAGTTTaGATGAGCAGCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKTWTEV*MSSSGW
Trigger: CCAGCCACTGCTGCTCATTCAAACTTCTGTCCATGT...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGAGACTCCCTGTATCCTaGCAAGATGTTCATGAATGT +
Preference number: 4 (lower is better)
Translates to: VSCKWGPREPRAPRQTAERLPVS*QDVHEC
Trigger: ACATTCATGAACATCTTGGCAGGATACAGGGAGTCT...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGTCCTTCTTCACCTCCTaGTTCTCACTCAGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGESFFTS*FSLSFR
Trigger: CCTGAAGCTGAGTGAGAAGCAGGAGGTGAAGAAGGA...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCGACATCAGGCCCAGTaGCGTCAGGATCTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDRHQAQ*RQDLCH
Trigger: GTGACAGAGATCCTGACGGCACTGGGCCTGATGTCG...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGTCCAGTACACAATGCTaGAGTAGACCACCGGACACA +
Preference number: 4 (lower is better)
Translates to: EEATNRINLGRLLGIVGRSSTQC*SRPPDT
Trigger: TGTGTCCGGTGGTCTACTGCAGCATTGTGTACTGGA...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAAATCCCACAAATACAACTGGCATCCCTGTGTGATAGGAAGAATCTGTGGCAGCCACGGCTGAGCGCTTaGGTAGGTGGGAGAAGCGCT +
Preference number: 4 (lower is better)
Translates to: EIPQIQLASLCDRKNLWQPRLSA*VGGRSA
Trigger: AGCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGG...CTGCCACAGATTCTTCCTATCACACAGGGATGCCAGTTGTATTTGTGGGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGGGTCCTCAGCTCCCGTaGCCTTCCATTAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: PWNSNLIAAQFTNTCVVGGPQLP*PSINQD
Trigger: ATCCTGGTTAATGGAAGGCCACGGGAGCTGAGGACC...CCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATGAGGGACACCACTTaGAAACAAGAGGCGCTATCC +
Preference number: 4 (lower is better)
Translates to: GESREEATNRINLGRLLGMRDTT*KQEALS
Trigger: GGATAGCGCCTCTTGTTTCCAAGTGGTGTCCCTCAT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCAAGGTGTGGCTTTCAATaGGATCCACTTCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWARCGFQ*DPLPED
Trigger: GTCCTCCGGAAGTGGATCCCATTGAAAGCCACACCT...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCGACATGAACCGTAGGTaGGTCAGGACCGTGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTDMNRR*VRTVSL
Trigger: CAGGGACACGGTCCTGACCCACCTACGGTTCATGTC...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGTTAGAGTCTCCAACATaGGATCCCCAGGAGGAGGTT +
Preference number: 4 (lower is better)
Translates to: STSLILRVSNMGSPGGGWLESPT*DPQEEV
Trigger: AACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAA...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGGCCAACTTATGCCCGTaGTTGTGCTTGTGTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKANLCP*LCLCWF
Trigger: GAACCAACACAAGCACAACCACGGGCATAAGTTGGC...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACTGTAGCAGGACATCTTaGGGAAGGTCCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDCSRTS*GRSSAP
Trigger: GGGAGCTGAGGACCTTCCGCAAGATGTCCTGCTACA...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAAGGTCTCCTCGCTCCATaGCATAGATCGTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQGLLAP*HRSSGS
Trigger: TGATCCTGACGATCTATGGCATGGAGCGAGGAGACC...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCACCTCCCAGTAGTCTTTaGATGCAGGTGTTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWAPPSSL*MQVLER
Trigger: TCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCACGCTATCCAGACCACTaGTGGGCTCATCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: ERVGRKLQTASTWEDSWARYPDH*WAHQRT
Trigger: TGTTCTTTGATGAGCCCACCAGTGGTCTGGATAGCG...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp CAGGGCCCAGCCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGCGCTATCCAGACCACTaGTGGGCTCATCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: QGPALELQPYSSPVYKHLRYPDH*WAHQRT
Trigger: TGTTCTTTGATGAGCCCACCAGTGGTCTGGATAGCG...CAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCGAAGGTGAGCACAGTTaGCATGAGGGCGGCGAACAT +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTEGEHS*HEGGEH
Trigger: ATGTTCGCCGCCCTCATGCCAACTGTGCTCACCTTC...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAAATCCCACAAATACAACTGGCATCCCTGTGTGATAGGAAGAATCTGTGGCAGACAGTCCCAAAGGGCTaGGACTGGGGGCTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: EIPQIQLASLCDRKNLWQTVPKG*DWGLPA
Trigger: AGCAGGAAGCCCCCAGTCCCAGCCCTTTGGGACTGT...CTGCCACAGATTCTTCCTATCACACAGGGATGCCAGTTGTATTTGTGGGATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCTGTGCTGTAGGGGATaGCAAGTGTGTAGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTLCCRG*QVCRAE
Trigger: CTCAGCCCTACACACTTGCCATCCCCTACAGCACAG...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGTGGTTGTGCTTGTGTTaGTTCCTGAACTCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEWLCLC*FLNSRD
Trigger: ATCCCTGGAGTTCAGGAACCAACACAAGCACAACCA...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR TCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCAGGATTGGGAGTGGTaGCCTAGACAGAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTQDWEW*PRQKTQ
Trigger: CTGGGTTTTCTGTCTAGGTCACCACTCCCAATCCTG...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp GAAATCCCACAAATACAACTGGCATCCCTGTGTGATAGGAAGAATCTGTGGCAGCCGCCACCACCAGCATaGCACCATCACTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: EIPQIQLASLCDRKNLWQPPPPA*HHHSSS
Trigger: AGAGGAAGAGTGATGGTGGCATGCTGGTGGTGGCGG...CTGCCACAGATTCTTCCTATCACACAGGGATGCCAGTTGTATTTGTGGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAACTGGTGGCAAAGGTGTaGCTTTCAATGGGATCCACT +
Preference number: 4 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQLVAKV*LSMGST
Trigger: AGTGGATCCCATTGAAAGCCACACCTTTGCCACCAG...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACACGCCAATAACCACGTaGGACATGAACCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHTPITT*DMNRRW
Trigger: CCACCTACGGTTCATGTCCCACGTGGTTATTGGCGT...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CCA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACACCCAGCTTCTGTCCTaGCAGATTGTCCAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHTQLLS*QIVQVS
Trigger: GCTGACTTGGACAATCTGCCAGGACAGAAGCTGGGT...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR GCA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGAGACTCCCTGTATCCTaGCAAGATGTTCATGAATGT +
Preference number: 4 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKRLPVS*QDVHEC
Trigger: ACATTCATGAACATCTTGGCAGGATACAGGGAGTCT...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR GCA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACAAACACAGACATTATTaGACAGGTGCCACCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDKHRHY*TGATRP
Trigger: GGGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTT...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CCA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCCGCTATCCAGACCACTaGTGGGCTCATCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTRYPDH*WAHQRT
Trigger: TGTTCTTTGATGAGCCCACCAGTGGTCTGGATAGCG...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR TCA 90 bp GAAATCCCACAAATACAACTGGCATCCCTGTGTGATAGGAAGAATCTGTGGCAGCCTCAAAGCCATACCTaGCATAGGAGAGATAGGAGC +
Preference number: 4 (lower is better)
Translates to: EIPQIQLASLCDRKNLWQPQSHT*HRRDRS
Trigger: GCTCCTATCTCTCCTATGTCAGGTATGGCTTTGAGG...CTGCCACAGATTCTTCCTATCACACAGGGATGCCAGTTGTATTTGTGGGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS GCA 90 bp CAGCCCACGGCCTCCAGCGCCTTCTCCGCCATCACGCCGCCGACCTaGAAGGGGAGGGCCTGCTCAGTTTGGGGCAGACCACCGAGCCCG +
Preference number: 5 (lower is better)
Translates to: QPTASSAFSAITPPT*KGRACSVWGRPPSP
Trigger: CGGGCTCGGTGGTCTGCCCCAAACTGAGCAGGCCCTCCCCTTGCAGGTCGGCGGCGTGATGGCGGAGAAGGCGCTGGAGGCCGTGGGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS GCA 90 bp GATGGTGAGAGGCGGTTGGGGTCGCGCCCTGACTCTGCTGGGCTGTaGACACCCGCTTCCCAGAGCCTGGTCCCGGACGCTGTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: DGERRLGSRPDSAGL*TPASQSLVPDAVSS
Trigger: GGAGGACACAGCGTCCGGGACCAGGCTCTGGGAAGCGGGTGTGCACAGCCCAGCAGAGTCAGGGCGCGACCCCAACCGCCTCTCACCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS CCA 90 bp GCCAGACGCTTCCTCTGCCCGCCAGAGAGCAGGGCTGTCCTCGTGTaGGAGCACGACATCAGGCCCAGTGCCGTCAGGATCTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: ARRFLCPPESRAVLV*EHDIRPSAVRISVT
Trigger: GGTGACAGAGATCCTGACGGCACTGGGCCTGATGTCGTGCTCCCACACGAGGACAGCCCTGCTCTCTGGCGGGCAGAGGAAGCGTCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp CGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGGAGCCCCCACTCAGCAGCCCCAAAGATaGGGCCACCAAGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: RINLGRLLGIVGRAGAPTQQPQR*GHQGGG
Trigger: GCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCTG...AGTGGGGGCTCCAGCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATCACGCCGCCGACCTaGACGCGCCCCCGGGCCGGT +
Preference number: 5 (lower is better)
Translates to: GESREEATNRINLGRLLGITPPT*TRPRAG
Trigger: ACCGGCCCGGGGGCGCGTCAAGGTCGGCGGCGTGAT...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp GTCAGTTGTAAGTGGGGCCCTAGAGAGCCTAGGGCTCCCAGGCAGACAGCAGAGCAGCAGCCCCAAAGATaGGGCCACCAAGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: VSCKWGPREPRAPRQTAEQQPQR*GHQGGG
Trigger: GCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCTG...CTCTGCTGTCTGCCTGGGAGCCCTAGGCTCTCTAGGGCCCCACTTACAACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp TCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTAGGGGCAGCGGGGAGGAGGGAAGACTaGGGGGTAGACACCTGCAGT +
Preference number: 5 (lower is better)
Translates to: SLRRGREHHETVHALGAAGRRED*GVDTCS
Trigger: ACTGCAGGTGTCTACCCCCAAGTCTTCCCTCCTCCC...CGCTGCCCCTAACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS TCA 90 bp CCACGGCTGAGCGCTTGGGTAGGTGGGAGAAGCGCTGGGCTTCAGTaGTGTGGTTCTCCACCTTCTTCAGGTGCGTGGTCAGCACAGGGG +
Preference number: 5 (lower is better)
Translates to: PRLSAWVGGRSAGLQ*CGSPPSSGAWSAQG
Trigger: CCCCTGTGCTGACCACGCACCTGAAGAAGGTGGAGAACCACATCACTGAAGCCCAGCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000524604.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 90 bp GCACATTGCAGGGCTGTGAGGGAGGGTCCCCATTCCCATTTCAGCTaGTGGGATCCTACAGCCCAAAAGGTCAGGCCTGTGCCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AHCRAVREGPHSHFS*WDPTAQKVRPVPAS
Trigger: GGAGGCTGGCACAGGCCTGACCTTTTGGGCTGTAGGATCCCAGCAGCTGAAATGGGAATGGGGACCCTCCCTCACAGCCCTGCAATGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533694.5
ENST00000534402.2
CDS GCA 90 bp GGCCAGGGCAAGCCACAGAGTAGACTTGGAGTAGGAACTCGGAGCTaGCCTCACAGGCACAGAGACCCCACAGGCACATTGCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: GQGKPQSRLGVGTRS*PHRHRDPTGTLQGC
Trigger: ACAGCCCTGCAATGTGCCTGTGGGGTCTCTGTGCCTGTGAGGGCAGCTCCGAGTTCCTACTCCAAGTCTACTCTGTGGCTTGCCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS-3UTR CAA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTTCCACGGCTGAGCGCTaGGGTAGGTGGGAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PREERIAPPGTSAQVYKVSTAER*GRWEKR
Trigger: GCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGGA...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 90 bp CATTGCAGGGCTGTGAGGGAGGGTCCCCATTCCCATTTCAGCTGCTaGGATCCTACAGCCCAAAAGGTCAGGCCTGTGCCAGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: HCRAVREGPHSHFSC*DPTAQKVRPVPASS
Trigger: AGAGGAGGCTGGCACAGGCCTGACCTTTTGGGCTGTAGGATCCCAGCAGCTGAAATGGGAATGGGGACCCTCCCTCACAGCCCTGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533694.5
ENST00000534402.2
CDS-3UTR CAA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGCAGCAGCCCCAAAGATaGGGCCACCAAGGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: EEATNRINLGRLLGIVGRQQPQR*GHQGGG
Trigger: GCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCTG...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 90 bp AGGCCGATGAGCACGCCAATAACCACGTGGGACATGAACCGTAGGTaGGTCAGGACCTTGGGAGGGGTCATCACCAGGAGAGGGATGTGT +
Preference number: 5 (lower is better)
Translates to: RPMSTPITTWDMNRR*VRTLGGVITRRGMC
Trigger: ACACATCCCTCTCCTGGTGATGACCCCTCCCAAGGTCCTGACCCACCTACGGTTCATGTCCCACGTGGTTATTGGCGTGCTCATCGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS-3UTR CAA 90 bp GAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATCCACGGCTGAGCGCTaGGGTAGGTGGGAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: ERVGRKLQTASTWEDSWASTAER*GRWEKR
Trigger: GCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGGA...TGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGTCCACGGCTGAGCGCTaGGGTAGGTGGGAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGSTAER*GRWEKR
Trigger: GCGCTTCTCCCACCTACCCAAGCGCTCAGCCGTGGA...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp TATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGAGACCGTGCATGCGTTAGGCAGCCGGTGTTGTaGAAGACCTTGCTGGCATCG +
Preference number: 5 (lower is better)
Translates to: YVPVTPEREGASRDRACVRQPVL*KTLLAS
Trigger: CGATGCCAGCAAGGTCTTCAACAACACCGGCTGCCT...AACGCATGCACGGTCTCGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTAGCGAGAAAGGAGGGTaGGGTCTTCCCCCACTCACC +
Preference number: 5 (lower is better)
Translates to: PREERIAPPGTSAQVYKVSEKGG*GLPPLT
Trigger: GGTGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCT...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp AGCACCAGCCTTATCCTTAGAGTCTCCAACATGGGATCCCCAGGAGGAGGTTGGATCCCCAGGAGGAGGTaGGCACTGTCCTCCCACCAG +
Preference number: 5 (lower is better)
Translates to: STSLILRVSNMGSPGGGWIPRRR*ALSSHQ
Trigger: CTGGTGGGAGGACAGTGCCAACCTCCTCCTGGGGAT...CCAACCTCCTCCTGGGGATCCCATGTTGGAGACTCTAAGGATAAGGCTGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS TCA 90 bp CAGCTCAGCTGTAGCAGGTGTTGGAGGGTAGTCAGAGAAGGTTCCTaGGCGAGCCCAGGAGTAAGAGCTAAGCAGGTGAAGGGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QLSCSRCWRVVREGS*ASPGVRAKQVKGRG
Trigger: CCCTCTCCCCTTCACCTGCTTAGCTCTTACTCCTGGGCTCGCTCAGGAACCTTCTCTGACTACCCTCCAACACCTGCTACAGCTGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS GCA 90 bp AGTCCATGTAGAGCTTGGCATCCTCCACATCCAGCGCTCGGAGGATaGTCTGTGGCTCCCGGAACGGGCAGCGTTCCTCTAAACATGTCA +
Preference number: 5 (lower is better)
Translates to: SPCRAWHPPHPALGG*SVAPGTGSVPLNMS
Trigger: TGACATGTTTAGAGGAACGCTGCCCGTTCCGGGAGCCACAGAGCATCCTCCGAGCGCTGGATGTGGAGGATGCCAAGCTCTACATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGCCAGAGGGGGCCACTTaGGTCAGTTGTAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGEPEGAT*VSCKWG
Trigger: GCCCCACTTACAACTGACCAAAGTGGCCCCCTCTGG...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp AACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCCCAGAGGGTGTGCCACCCCTGGCTaGGGAGGAGGGAAGACTTGG +
Preference number: 5 (lower is better)
Translates to: NLIAAQFTNTCVVGTPRGCATPG*GGGKTW
Trigger: CCAAGTCTTCCCTCCTCCCAAGCCAGGGGTGGCACA...CCCTCTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACGAGGGCCTGCTCAGTTaGGGGCAGACCACCGAGCCC +
Preference number: 5 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDEGLLS*GQTTEP
Trigger: GGGCTCGGTGGTCTGCCCCAAACTGAGCAGGCCCTC...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS GCA 90 bp AACGCAGCACAAGGTAGGCCAGCAGCCGCAGGGCTAGGAAGAAGATaGCCAAGACCAGGAAGTCCATGTAGAGCTTGGCATCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: NAAQGRPAAAGLGRR*PRPGSPCRAWHPPH
Trigger: ATGTGGAGGATGCCAAGCTCTACATGGACTTCCTGGTCTTGGGCATCTTCTTCCTAGCCCTGCGGCTGCTGGCCTACCTTGTGCTGCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 90 bp TCTCATGGATGGGCGTGGAGAGGGGATCAAAGCTGTAGAAGACCCTaGTCCTCTTCTGTAATCACAGTGGCCACTGTCTCGCCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SHGWAWRGDQSCRRP*SSSVITVATVSPPP
Trigger: TGGAGGGGGCGAGACAGTGGCCACTGTGATTACAGAAGAGGACCAGGGTCTTCTACAGCTTTGATCCCCTCTCCACGCCCATCCATGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS-3UTR CAA 90 bp CAGCAGCCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGTTCATGAATGTAGACTaGCCAGCCCCTGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: QQPPSSLCMQVLERVGRKFMNVD*PAPEGP
Trigger: GGGCCCCTCAGGGGCTGGCAAGTCTACATTCATGAA...CTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGGCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp AGTGGCAGGTGGGAGAGAAACACAGACATTATTGCACAGGTGCCACCAGGCCCTTTCATGAATGTAGACTaGCCAGCCCCTGAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: SGRWERNTDIIAQVPPGPFMNVD*PAPEGP
Trigger: GGGCCCCTCAGGGGCTGGCAAGTCTACATTCATGAA...AGGGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTTCTCTCCCACCTGCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp ACCGTGCATGCGTTAGGGGCAGCGAGAAAGGAGGGTTGGGTCTTCCCCCACTCAGTGTTGTTGAAGACCTaGCTGGCATCGTCGCCAATA +
Preference number: 5 (lower is better)
Translates to: TVHALGAARKEGWVFPHSVLLKT*LASSPI
Trigger: TATTGGCGACGATGCCAGCAAGGTCTTCAACAACAC...TGAGTGGGGGAAGACCCAACCCTCCTTTCTCGCTGCCCCTAACGCATGCACGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp GGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGAGGCAGCCGGTGTTGTaGAAGACCTTGCTGGCATCG +
Preference number: 5 (lower is better)
Translates to: GGSYKPHQLGKTPGHSGERQPVL*KTLLAS
Trigger: CGATGCCAGCAAGGTCTTCAACAACACCGGCTGCCT...CTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp CCAAGGGAGGAGAGGATAGCCCCGCCAGGAACCAGTGCCCAAGTCTATAAGGTTAAGAGGCAGCCGGTGTaGTTGAAGACCTTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: PREERIAPPGTSAQVYKVKRQPV*LKTLLA
Trigger: TGCCAGCAAGGTCTTCAACAACACCGGCTGCCTCTT...AACCTTATAGACTTGGGCACTGGTTCCTGGCGGGGCTATCCTCTCCTCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCAAGAGGCAGCCGGTGTaGTTGAAGACCTTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGKRQPV*LKTLLA
Trigger: TGCCAGCAAGGTCTTCAACAACACCGGCTGCCTCTT...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACGATGGTGAGAGGCGGTaGGGGTCGCGCCCTGACTCT +
Preference number: 5 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDDGERR*GSRPDS
Trigger: AGAGTCAGGGCGCGACCCCAACCGCCTCTCACCATC...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp ATGGCCTGTTCTCATGTATGTGCCTGTCACTCCGGAGAGGGAGGGAGCATCACGCCAGTTTACAAACACTaGTGTGGTGGGGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: MACSHVCACHSGEGGSITPVYKH*CGGDPQ
Trigger: CTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGG...CGTGATGCTCCCTCCCTCTCCGGAGTGACAGGCACATACATGAGAACAGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp GGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGCTGCCCGTGGTTGTGCTaGTGTTGGTTCCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: GSYKPHQLGKTPGHSGEGCPWLC*CWFLNS
Trigger: GGAGTTCAGGAACCAACACAAGCACAACCACGGGCA...GCCCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS TCA 90 bp CCTGTATCCTGCCAAGATGTTCATGAATGTAGACTTGCCAGCCCCTaGGGGGCCCATGATGCCAATCAGCTCCCGGCGGCAGAATTTACC +
Preference number: 5 (lower is better)
Translates to: PVSCQDVHECRLASP*GAHDANQLPAAEFT
Trigger: GGTAAATTCTGCCGCCGGGAGCTGATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCTACATTCATGAACATCTTGGCAGGATACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524604.5
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 90 bp TTCTCAGGGCTGCTCTTCTTCTCAGCCATAGCGCACAGCCCATTCTaGACAGCCCTGAACAACATGGGGTTCAGGTCTCCATACTCGCCA +
Preference number: 5 (lower is better)
Translates to: FSGLLFFSAIAHSPF*TALNNMGFRSPYSP
Trigger: TGGCGAGTATGGAGACCTGAACCCCATGTTGTTCAGGGCTGTGCAGAATGGGCTGTGCGCTATGGCTGAGAAGAAGAGCAGCCCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533694.5
ENST00000534402.2
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 90 bp GACCCCCTTCCATCCCTCCATCTCAGGCCAATCCTCCTTGAGGCCTaGAGACACTCACCTTGTCAAACATCTCAAAGAGCTTGGCACTGG +
Preference number: 5 (lower is better)
Translates to: DPLPSLHLRPILLEA*RHSPCQTSQRAWHW
Trigger: CCAGTGCCAAGCTCTTTGAGATGTTTGACAAGGTGAGTGTCTCCAGGCCTCAAGGAGGATTGGCCTGAGATGGAGGGATGGAAGGGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS-3UTR CAA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGAAGAGGCAGCCGGTGTaGTTGAAGACCTTGCTGGCA +
Preference number: 5 (lower is better)
Translates to: EEATNRINLGRLLGIVGRKRQPV*LKTLLA
Trigger: TGCCAGCAAGGTCTTCAACAACACCGGCTGCCTCTT...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GAAGACTTGGGGGTAGACACCTGCAGTTCCTGTAGACACCCTGGGCAGCACCAGAACTTATGCCCGTGGTaGTGCTTGTGTTGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: EDLGVDTCSSCRHPGQHQNLCPW*CLCWFL
Trigger: CAGGAACCAACACAAGCACAACCACGGGCATAAGTT...CTGGTGCTGCCCAGGGTGTCTACAGGAACTGCAGGTGTCTACCCCCAAGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp CCTCCCAGTAGTCTTTGCATGCAGGTGTTGGAGAGAGTAGGGAGGAAGCTACAAAGGCAGCCGGTGTTGTaGAAGACCTTGCTGGCATCG +
Preference number: 5 (lower is better)
Translates to: PPSSLCMQVLERVGRKLQRQPVL*KTLLAS
Trigger: CGATGCCAGCAAGGTCTTCAACAACACCGGCTGCCT...TTGTAGCTTCCTCCCTACTCTCTCCAACACCTGCATGCAAAGACTACTGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp CTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGACCCAGAGGGGGCCACTTaGGTCAGTTGTAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: LELQPYSSPVYKHLCGGDPEGAT*VSCKWG
Trigger: GCCCCACTTACAACTGACCAAAGTGGCCCCCTCTGG...GTCCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp CAGGGCCCAGCCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGCCAGTTTACAAACACTaGTGTGGTGGGGACCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGPALELQPYSSPVYKHLPVYKH*CGGDPQ
Trigger: CTGGGGGTCCCCACCACACAAGTGTTTGTAAACTGG...CAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGGCTGGGCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GGAGAGAGTAGGGAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCGAAACACAGACATTATaGCACAGGTGCCACCAGGCC +
Preference number: 5 (lower is better)
Translates to: GESREEATNRINLGRLLGETQTL*HRCHQA
Trigger: GGCCTGGTGGCACCTGTGCAATAATGTCTGTGTTTC...GCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTCCCTACTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp GAGGAAGCTACAAACCGCATCAACTTGGGAAGACTCCTGGGCATAGTGGGGAGGGTGTTGTTGAAGACCTaGCTGGCATCGTCGCCAATA +
Preference number: 5 (lower is better)
Translates to: EEATNRINLGRLLGIVGRVLLKT*LASSPI
Trigger: TATTGGCGACGATGCCAGCAAGGTCTTCAACAACAC...CCTCCCCACTATGCCCAGGAGTCTTCCCAAGTTGATGCGGTTTGTAGCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 90 bp AGAGGGCACTCTGGCCGCATCTGTATCCTTTACGGTTCAGGCACTTaGAGGGATACCCAGAAGCCAAGAGCACTGTTCAGTTTCATAAGC +
Preference number: 5 (lower is better)
Translates to: RGHSGRICILYGSGT*RDTQKPRALFSFIS
Trigger: GCTTATGAAACTGAACAGTGCTCTTGGCTTCTGGGTATCCCTCCAAGTGCCTGAACCGTAAAGGATACAGATGCGGCCAGAGTGCCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CCA 90 bp CAATCCTCTTCTGAAAGGCGTGGGAAAATCCACACATCTCATGGATaGGCGTGGAGAGGGGATCAAAGCTGTAGAAGACCCTGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: QSSSERRGKIHTSHG*AWRGDQSCRRPWSS
Trigger: AGAGGACCAGGGTCTTCTACAGCTTTGATCCCCTCTCCACGCCCATCCATGAGATGTGTGGATTTTCCCACGCCTTTCAGAAGAGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS-3UTR CAA 90 bp AGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACCTTCTGTCCTGGCAGATaGTCCAAGTCAGCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: SPSLSISTSIMGLPVDSTFCPGR*SKSARV
Trigger: GACCCTGGCTGACTTGGACAATCTGCCAGGACAGAA...GGTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS CCA 90 bp TCTTCTGAAAGGCGTGGGAAAATCCACACATCTCATGGATGGGCGTaGAGAGGGGATCAAAGCTGTAGAAGACCCTGGTCCTCTTCTGTA +
Preference number: 5 (lower is better)
Translates to: SSERRGKIHTSHGWA*RGDQSCRRPWSSSV
Trigger: TACAGAAGAGGACCAGGGTCTTCTACAGCTTTGATCCCCTCTCCACGCCCATCCATGAGATGTGTGGATTTTCCCACGCCTTTCAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS-3UTR CAA 90 bp CCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGGTGTTGTTGAAGACCTaGCTGGCATCGTCGCCAATA +
Preference number: 5 (lower is better)
Translates to: PWNSNLIAAQFTNTCVVGVLLKT*LASSPI
Trigger: TATTGGCGACGATGCCAGCAAGGTCTTCAACAACAC...CCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000619701.5
ENST00000622721.1
CDS-3UTR CAA 90 bp GAGTCCTTCCCTGTCCATTTCAACATCCATAATGGGACTTCCAGTGGACTCCACGTGGTTGTGCTTGTGTaGGTTCCTGAACTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: ESFPVHFNIHNGTSSGLHVVVLV*VPELQG
Trigger: TCCCTGGAGTTCAGGAACCAACACAAGCACAACCAC...GTGGAGTCCACTGGAAGTCCCATTATGGATGTTGAAATGGACAGGGAAGGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS-3UTR CAA 90 bp CCCTGGAACTCCAACCTTATAGCAGCCCAGTTTACAAACACTTGTGTGGTGGGGGACATGGACAGAAGTTaGAATGAGCAGCAGTGGCTG +
Preference number: 5 (lower is better)
Translates to: PWNSNLIAAQFTNTCVVGDMDRS*NEQQWL
Trigger: CAGCCACTGCTGCTCATTCAAACTTCTGTCCATGTC...CCCCACCACACAAGTGTTTGTAAACTGGGCTGCTATAAGGTTGGAGTTCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS TCA 90 bp ACGACCACCACTAATATCAAAGTACCAGAGGCAACAATCCTCTTCTaGAAGGCGTGGGAAAATCCACACATCTCATGGATGGGCGTGGAG +
Preference number: 5 (lower is better)
Translates to: TTTTNIKVPEATILF*KAWENPHISWMGVE
Trigger: CTCCACGCCCATCCATGAGATGTGTGGATTTTCCCACGCCTTTCAGAAGAGGATTGTTGCCTCTGGTACTTTGATATTAGTGGTGGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS GCA 72 bp CATCACGCCGCCGACCTTGACGCGCCCCCGGGCCGGTaGGGGGCCGGGATGCTCAGCGCTGCCACGGACCGG +
Preference number: 6 (lower is better)
Translates to: HHAADLDAPPGR*GAGMLSAATDR
Trigger: CCGGTCCGTGGCAGCGCTGAGCATCCCGGCCCCGCACCGGCCCGGGGGCGCGTCAAGGTCGGCGGCGTGATG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS CCA 72 bp ACTCTGCTGGGCTGTGCACACCCGCTTCCCAGAGCCTaGTCCCGGACGCTGTGTCCTCCGAGCCCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: TLLGCAHPLPRA*SRTLCPPSPRG
Trigger: GCCCCGCGGGCTCGGAGGACACAGCGTCCGGGACCAGGCTCTGGGAAGCGGGTGTGCACAGCCCAGCAGAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS GCA 72 bp TCCGCCATCACGCCGCCGACCTGCAAGGGGAGGGCCTaGTCAGTTTGGGGCAGACCACCGAGCCCGGCTCAA +
Preference number: 6 (lower is better)
Translates to: SAITPPTCKGRA*SVWGRPPSPAQ
Trigger: TTGAGCCGGGCTCGGTGGTCTGCCCCAAACTGAGCAGGCCCTCCCCTTGCAGGTCGGCGGCGTGATGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS GCA 72 bp GCCTCCAGCGCCTTCTCCGCCATCACGCCGCCGACCTaGAAGGGGAGGGCCTGCTCAGTTTGGGGCAGACCA +
Preference number: 6 (lower is better)
Translates to: ASSAFSAITPPT*KGRACSVWGRP
Trigger: TGGTCTGCCCCAAACTGAGCAGGCCCTCCCCTTGCAGGTCGGCGGCGTGATGGCGGAGAAGGCGCTGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622721.1
CDS CCA 72 bp GGCTCGGAGGAGACGGCAAGGATGGTGAGAGGCGGTTaGGGTCGCGCCCTGACTCTGCTGGGCTGTGCACAC +
Preference number: 6 (lower is better)
Translates to: GSEETARMVRGG*GRALTLLGCAH
Trigger: GTGTGCACAGCCCAGCAGAGTCAGGGCGCGACCCCAACCGCCTCTCACCATCCTTGCCGTCTCCTCCGAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS CAA 72 bp CGGCTCGGAGGAGACGGCAAGGATGGTGAGAGGCGGTaGGGGTCGCGCCCTGACTCTGCTGGGCTGTGCACA +
Preference number: 6 (lower is better)
Translates to: RLGGDGKDGERR*GSRPDSAGLCT
Trigger: TGTGCACAGCCCAGCAGAGTCAGGGCGCGACCCCAACCGCCTCTCACCATCCTTGCCGTCTCCTCCGAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619701.5
CDS CCA 72 bp CGATCAGCAGCCCCAAAGATTGGGCCACCAAGGCGGTaGCGGTGGCCAGGGCTGAGAAGAGCAGGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: RSAAPKIGPPRR*RWPGLRRAGSG
Trigger: GCCGCTTCCTGCTCTTCTCAGCCCTGGCCACCGCCACCGCCTTGGTGGCCCAATCTTTGGGGCTGCTGATCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 72 bp TTCCTCTGCCCGCCAGAGAGCAGGGCTGTCCTCGTGTaGGAGCACGACATCAGGCCCAGTGCCGTCAGGATC +
Preference number: 6 (lower is better)
Translates to: FLCPPESRAVLV*EHDIRPSAVRI
Trigger: GATCCTGACGGCACTGGGCCTGATGTCGTGCTCCCACACGAGGACAGCCCTGCTCTCTGGCGGGCAGAGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp TGGGCTTCAGTGATGTGGTTCTCCACCTTCTTCAGGTaGGTGGTCAGCACAGGGGGTTCCGCCCCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: WASVMWFSTFFR*VVSTGGSAPSS
Trigger: GGAGGACGGGGCGGAACCCCCTGTGCTGACCACGCACCTGAAGAAGGTGGAGAACCACATCACTGAAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000524604.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp AGAGCTTGGCATCCTCCACATCCAGCGCTCGGAGGATaGTCTGTGGCTCCCGGAACGGGCAGCGTTCCTCTA +
Preference number: 6 (lower is better)
Translates to: RAWHPPHPALGG*SVAPGTGSVPL
Trigger: TAGAGGAACGCTGCCCGTTCCGGGAGCCACAGAGCATCCTCCGAGCGCTGGATGTGGAGGATGCCAAGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS TCA 72 bp GGCTGGGGTACAGGCTGGGGCAAGCCTCTATCTCTCTaGCTTGACCCGGTAACGCAGCACAAGGTAGGCCAG +
Preference number: 6 (lower is better)
Translates to: GWGTGWGKPLSL*LDPVTQHKVGQ
Trigger: CTGGCCTACCTTGTGCTGCGTTACCGGGTCAAGTCAGAGAGATAGAGGCTTGCCCCAGCCTGTACCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp GGCTGTCCTCGTGTGGGAGCACGACATCAGGCCCAGTaGCGTCAGGATCTCTGTCACCAGCTCCTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: GCPRVGARHQAQ*RQDLCHQLLLH
Trigger: GTGAAGAAGGAGCTGGTGACAGAGATCCTGACGGCACTGGGCCTGATGTCGTGCTCCCACACGAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp AGGGCTGTGAGGGAGGGTCCCCATTCCCATTTCAGCTaGTGGGATCCTACAGCCCAAAAGGTCAGGCCTGTG +
Preference number: 6 (lower is better)
Translates to: RAVREGPHSHFS*WDPTAQKVRPV
Trigger: CACAGGCCTGACCTTTTGGGCTGTAGGATCCCAGCAGCTGAAATGGGAATGGGGACCCTCCCTCACAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533694.5
ENST00000534402.2
CDS CCA 72 bp GCTGTGAGGGAGGGTCCCCATTCCCATTTCAGCTGCTaGGATCCTACAGCCCAAAAGGTCAGGCCTGTGCCA +
Preference number: 6 (lower is better)
Translates to: AVREGPHSHFSC*DPTAQKVRPVP
Trigger: TGGCACAGGCCTGACCTTTTGGGCTGTAGGATCCCAGCAGCTGAAATGGGAATGGGGACCCTCCCTCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000533694.5
ENST00000534402.2
CDS CAA 90 bp ACGCCAATAACCACGTGGGACATGAACCGTAGGTGGGTCAGGACCTaGGGAGGGGTCATCACCAGGAGAGGGATGTGTTACAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: TPITTWDMNRRWVRT*GGVITRRGMCYRPG
Trigger: CCCTGGCCTGTAACACATCCCTCTCCTGGTGATGACCCCTCCCAAGGTCCTGACCCACCTACGGTTCATGTCCCACGTGGTTATTGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CCA 72 bp AGCACGCCAATAACCACGTGGGACATGAACCGTAGGTaGGTCAGGACCTTGGGAGGGGTCATCACCAGGAGA +
Preference number: 6 (lower is better)
Translates to: STPITTWDMNRR*VRTLGGVITRR
Trigger: TCTCCTGGTGATGACCCCTCCCAAGGTCCTGACCCACCTACGGTTCATGTCCCACGTGGTTATTGGCGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 72 bp ACCACGTGGGACATGAACCGTAGGTGGGTCAGGACCTaGGGAGGGGTCATCACCAGGAGAGGGATGTGTTAC +
Preference number: 6 (lower is better)
Translates to: TTWDMNRRWVRT*GGVITRRGMCY
Trigger: GTAACACATCCCTCTCCTGGTGATGACCCCTCCCAAGGTCCTGACCCACCTACGGTTCATGTCCCACGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 90 bp ATTCCAGACTCCCTGTATCCTGCCAAGATGTTCATGAATGTAGACTaGCCAGCCCCTGAGGGGCCCATGATGCCAATCAGCTCCCGGCGG +
Preference number: 6 (lower is better)
Translates to: IPDSLYPAKMFMNVD*PAPEGPMMPISSRR
Trigger: CCGCCGGGAGCTGATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCTACATTCATGAACATCTTGGCAGGATACAGGGAGTCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524604.5
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp GTCCTCAGCTCCCGTGGCCTTCCATTAACCAGGATCTaGCCCTTCATTCCAGACTCCCTGTATCCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: VLSSRGLPLTRI*PFIPDSLYPAK
Trigger: CTTGGCAGGATACAGGGAGTCTGGAATGAAGGGGCAGATCCTGGTTAATGGAAGGCCACGGGAGCTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000524604.5
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS GCA 72 bp AAGCCACAGAGTAGACTTGGAGTAGGAACTCGGAGCTaGCCTCACAGGCACAGAGACCCCACAGGCACATTG +
Preference number: 6 (lower is better)
Translates to: KPQSRLGVGTRS*PHRHRDPTGTL
Trigger: CAATGTGCCTGTGGGGTCTCTGTGCCTGTGAGGGCAGCTCCGAGTTCCTACTCCAAGTCTACTCTGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CCA 72 bp GTAGCAGGACATCTTGCGGAAGGTCCTCAGCTCCCGTaGCCTTCCATTAACCAGGATCTGCCCCTTCATTCC +
Preference number: 6 (lower is better)
Translates to: VAGHLAEGPQLP*PSINQDLPLHS
Trigger: GGAATGAAGGGGCAGATCCTGGTTAATGGAAGGCCACGGGAGCTGAGGACCTTCCGCAAGATGTCCTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000524604.5
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS TCA 72 bp CCCCCTTCCATCCCTCCATCTCAGGCCAATCCTCCTTaGGGCCTGGAGACACTCACCTTGTCAAACATCTCA +
Preference number: 6 (lower is better)
Translates to: PPSIPPSQANPP*GLETLTLSNIS
Trigger: TGAGATGTTTGACAAGGTGAGTGTCTCCAGGCCTCAAGGAGGATTGGCCTGAGATGGAGGGATGGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS GCA 72 bp CTGCTCTTCTTCTCAGCCATAGCGCACAGCCCATTCTaGACAGCCCTGAACAACATGGGGTTCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LLFFSAIAHSPF*TALNNMGFRSP
Trigger: TGGAGACCTGAACCCCATGTTGTTCAGGGCTGTGCAGAATGGGCTGTGCGCTATGGCTGAGAAGAAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000533694.5
ENST00000534402.2
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CCA 72 bp TGTGAAGGGGATGAAGCTGGCAGGAAGAGGGCACTCTaGCCGCATCTGTATCCTTTACGGTTCAGGCACTTG +
Preference number: 6 (lower is better)
Translates to: CEGDEAGRKRAL*PHLYPLRFRHL
Trigger: CAAGTGCCTGAACCGTAAAGGATACAGATGCGGCCAGAGTGCCCTCTTCCTGCCAGCTTCATCCCCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CCA 72 bp AGGCGTGGGAAAATCCACACATCTCATGGATGGGCGTaGAGAGGGGATCAAAGCTGTAGAAGACCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RRGKIHTSHGWA*RGDQSCRRPWS
Trigger: GGACCAGGGTCTTCTACAGCTTTGATCCCCTCTCCACGCCCATCCATGAGATGTGTGGATTTTCCCACGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 72 bp ACCCCCTTCCATCCCTCCATCTCAGGCCAATCCTCCTaGAGGCCTGGAGACACTCACCTTGTCAAACATCTC +
Preference number: 6 (lower is better)
Translates to: TPFHPSISGQSS*RPGDTHLVKHL
Trigger: GAGATGTTTGACAAGGTGAGTGTCTCCAGGCCTCAAGGAGGATTGGCCTGAGATGGAGGGATGGAAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CAA 90 bp CCCCTACTGACCCCCTTCCATCCCTCCATCTCAGGCCAATCCTCCTaGAGGCCTGGAGACACTCACCTTGTCAAACATCTCAAAGAGCTT +
Preference number: 6 (lower is better)
Translates to: PLLTPFHPSISGQSS*RPGDTHLVKHLKEL
Trigger: AAGCTCTTTGAGATGTTTGACAAGGTGAGTGTCTCCAGGCCTCAAGGAGGATTGGCCTGAGATGGAGGGATGGAAGGGGGTCAGTAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS TCA 72 bp CTGTCACTTGACCAGCTCTCCCAGCCTCTTAGTCAGTaGGCTCCTTGGGGGCAGTTCTCACTCATCTTGGTA +
Preference number: 6 (lower is better)
Translates to: LSLDQLSQPLSQ*APWGQFSLILV
Trigger: TACCAAGATGAGTGAGAACTGCCCCCAAGGAGCTCACTGACTAAGAGGCTGGGAGAGCTGGTCAAGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CCA 72 bp ATGCAGAACTGTGTGAGGGTGCTGGTGGCAAAGGTGTaGCTTTCAATGGGATCCACTTCCGGAGGACAAGGA +
Preference number: 6 (lower is better)
Translates to: MQNCVRVLVAKV*LSMGSTSGGQG
Trigger: TCCTTGTCCTCCGGAAGTGGATCCCATTGAAAGCCACACCTTTGCCACCAGCACCCTCACACAGTTCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000533694.5
ENST00000534402.2
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CAA 72 bp TCCCTGTATCCTGCCAAGATGTTCATGAATGTAGACTaGCCAGCCCCTGAGGGGCCCATGATGCCAATCAGC +
Preference number: 6 (lower is better)
Translates to: SLYPAKMFMNVD*PAPEGPMMPIS
Trigger: GCTGATTGGCATCATGGGCCCCTCAGGGGCTGGCAAGTCTACATTCATGAACATCTTGGCAGGATACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000524604.5
ENST00000533694.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CAA 72 bp CTCTGGCCGCATCTGTATCCTTTACGGTTCAGGCACTaGGAGGGATACCCAGAAGCCAAGAGCACTGTTCAG +
Preference number: 6 (lower is better)
Translates to: LWPHLYPLRFRH*EGYPEAKSTVQ
Trigger: CTGAACAGTGCTCTTGGCTTCTGGGTATCCCTCCAAGTGCCTGAACCGTAAAGGATACAGATGCGGCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CCA 72 bp TCTGGCCGCATCTGTATCCTTTACGGTTCAGGCACTTaGAGGGATACCCAGAAGCCAAGAGCACTGTTCAGT +
Preference number: 6 (lower is better)
Translates to: SGRICILYGSGT*RDTQKPRALFS
Trigger: ACTGAACAGTGCTCTTGGCTTCTGGGTATCCCTCCAAGTGCCTGAACCGTAAAGGATACAGATGCGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CCA 72 bp CCATCCCTCCATCTCAGGCCAATCCTCCTTGAGGCCTaGAGACACTCACCTTGTCAAACATCTCAAAGAGCT +
Preference number: 6 (lower is better)
Translates to: PSLHLRPILLEA*RHSPCQTSQRA
Trigger: AGCTCTTTGAGATGTTTGACAAGGTGAGTGTCTCCAGGCCTCAAGGAGGATTGGCCTGAGATGGAGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CCA 72 bp TCTGAAAGGCGTGGGAAAATCCACACATCTCATGGATaGGCGTGGAGAGGGGATCAAAGCTGTAGAAGACCC +
Preference number: 6 (lower is better)
Translates to: SERRGKIHTSHG*AWRGDQSCRRP
Trigger: GGGTCTTCTACAGCTTTGATCCCCTCTCCACGCCCATCCATGAGATGTGTGGATTTTCCCACGCCTTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 90 bp AAGAGGGCACTCTGGCCGCATCTGTATCCTTTACGGTTCAGGCACTaGGAGGGATACCCAGAAGCCAAGAGCACTGTTCAGTTTCATAAG +
Preference number: 6 (lower is better)
Translates to: KRALWPHLYPLRFRH*EGYPEAKSTVQFHK
Trigger: CTTATGAAACTGAACAGTGCTCTTGGCTTCTGGGTATCCCTCCAAGTGCCTGAACCGTAAAGGATACAGATGCGGCCAGAGTGCCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CAA 90 bp CCCTGTGTTTCCATAGCACCTCTCCTATGCCAGCATGTTTGTTACTaGATGTGCCTGTCACTTGACCAGCTCTCCCAGCCTCTTAGTCAG +
Preference number: 6 (lower is better)
Translates to: PCVSIAPLLCQHVCY*MCLSLDQLSQPLSQ
Trigger: CTGACTAAGAGGCTGGGAGAGCTGGTCAAGTGACAGGCACATCAAGTAACAAACATGCTGGCATAGGAGAGGTGCTATGGAAACACAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS TCA 72 bp CATGATGCCAATCAGCTCCCGGCGGCAGAATTTACCTaGGAGGCACTTGAGAAGGGTCTTATAACCTGCAGT +
Preference number: 6 (lower is better)
Translates to: HDANQLPAAEFT*EALEKGLITCS
Trigger: ACTGCAGGTTATAAGACCCTTCTCAAGTGCCTCTCAGGTAAATTCTGCCGCCGGGAGCTGATTGGCATCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS GCA 72 bp AGCGTTCCTCTAAACATGTCAGGTCTCCTCGCTCCATaGCATAGATCGTCAGGATCACACCCTCAAAGCCAT +
Preference number: 6 (lower is better)
Translates to: SVPLNMSGLLAP*HRSSGSHPQSH
Trigger: ATGGCTTTGAGGGTGTGATCCTGACGATCTATGGCATGGAGCGAGGAGACCTGACATGTTTAGAGGAACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS TCA 72 bp CATGATGCCAATCAGCTCCCGGCGGCAGAATTTACCTaGGAGGCACTTGAGAAGGGTCTTATAACCCCTTTT +
Preference number: 6 (lower is better)
Translates to: HDANQLPAAEFT*EALEKGLITPF
Trigger: AAAAGGGGTTATAAGACCCTTCTCAAGTGCCTCTCAGGTAAATTCTGCCGCCGGGAGCTGATTGGCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000524604.5
ENST00000615496.4
ENST00000619701.5
ENST00000622721.1
CDS CAA 72 bp TTCATTGGAAGGCAGCATATGCATTTAGAGCACGGTTaGGAGTCAGGTGGATCTGGGTTCAAATTCTGGCTC +
Preference number: 6 (lower is better)
Translates to: FIGRQHMHLEHG*ESGGSGFKFWL
Trigger: GAGCCAGAATTTGAACCCAGATCCACCTGACTCCAAACCGTGCTCTAAATGCATATGCTGCCTTCCAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 90 bp GGATACCCAGAAGCCAAGAGCACTGTTCAGTTTCATAAGCATATATaGAGGACCTGTTGTATGCCAGGCACTGGGATTACAATGATGCAT +
Preference number: 6 (lower is better)
Translates to: GYPEAKSTVQFHKHI*RTCCMPGTGITMMH
Trigger: ATGCATCATTGTAATCCCAGTGCCTGGCATACAACAGGTCCTCAATATATGCTTATGAAACTGAACAGTGCTCTTGGCTTCTGGGTATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS CAA 90 bp TTTCATTCATTCATTGGAAGGCAGCATATGCATTTAGAGCACGGTTaGGAGTCAGGTGGATCTGGGTTCAAATTCTGGCTCCACACTTAC +
Preference number: 6 (lower is better)
Translates to: FHSFIGRQHMHLEHG*ESGGSGFKFWLHTY
Trigger: GTAAGTGTGGAGCCAGAATTTGAACCCAGATCCACCTGACTCCAAACCGTGCTCTAAATGCATATGCTGCCTTCCAATGAATGAATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533694.5
CDS CAA 72 bp GAAGCCAAGAGCACTGTTCAGTTTCATAAGCATATATaGAGGACCTGTTGTATGCCAGGCACTGGGATTACA +
Preference number: 6 (lower is better)
Translates to: EAKSTVQFHKHI*RTCCMPGTGIT
Trigger: TGTAATCCCAGTGCCTGGCATACAACAGGTCCTCAATATATGCTTATGAAACTGAACAGTGCTCTTGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS TCA 72 bp GCATGGGCAAAGCTTAGAGGCATGAAACATGTGGCTTaGCCAGGGAATTACAAGCAACTCAGTATTATTAGA +
Preference number: 6 (lower is better)
Translates to: AWAKLRGMKHVA*PGNYKQLSIIR
Trigger: TCTAATAATACTGAGTTGCTTGTAATTCCCTGGTCAAGCCACATGTTTCATGCCTCTAAGCTTTGCCCATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534402.2
CDS TCA 72 bp ACTAATATCAAAGTACCAGAGGCAACAATCCTCTTCTaGAAGGCGTGGGAAAATCCACACATCTCATGGATG +
Preference number: 6 (lower is better)
Translates to: TNIKVPEATILF*KAWENPHISWM
Trigger: CATCCATGAGATGTGTGGATTTTCCCACGCCTTTCAGAAGAGGATTGTTGCCTCTGGTACTTTGATATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533694.5