RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000118777

Ensembl transcript IDs: ENST00000237612.8, ENST00000503830.2, ENST00000505480.6, ENST00000515655.5, ENST00000650821.1

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCAGATGATTCTGACGCACACCTGGATTATAAACCACTAAACCACTaGACTACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGT +
Preference number: 1 (lower is better)
Translates to: SDDSDAHLDYKPLNH*TTPRRLRDLPELEC
Trigger: ACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTTATAATCCAGGTGTGCGTCAGAATCATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCATGCTGTGCAACAGTGTaGTGGCAAGGGAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: TPRRLRDLPELECSRNGACCATV*WQGNRK
Trigger: TTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCA...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATG +
Preference number: 2 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRPKKVT*PPRARM
Trigger: CATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGG...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATG +
Preference number: 2 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLPKKVT*PPRARM
Trigger: CATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATG +
Preference number: 2 (lower is better)
Translates to: TTLGCSNVLITATEGNTSPKKVT*PPRARM
Trigger: CATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCCAGATTTCTTCCCCATaGTTACTGTCTGAGGAGATT +
Preference number: 2 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFQISSP*LLSEEI
Trigger: AATCTCCTCAGACAGTAACCATGGGGAAGAAATCTG...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTACAAGCCAAGGCCACGTaGTTCTTCCACAAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLQAKAT*FFHKPQ
Trigger: CTGGGGCTTGTGGAAGAATCACGTGGCCTTGGCTTG...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515655.5
3UTR-3UTR CCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCTATTACTGGACTCCTaGCCCTCTACTCTACCCACA +
Preference number: 2 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLLLLDS*PSTLPT
Trigger: TGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACTGCTGTGCAACAGTGTaGTGGCAAGGGAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNCCATV*WQGNRK
Trigger: TTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCA...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATGCTGTGCAACAGTGTaGTGGCAAGGGAACAGAAAA +
Preference number: 2 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLCCATV*WQGNRK
Trigger: TTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCCTAATATGCGATACATaGTGTCTTGGGTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFLICDT*CLGFFH
Trigger: ATGAAAGAACCCAAGACATCATGTATCGCATATTAG...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCTCAGCCAAGATTCCTaGGATATTATACCACTAGAC +
Preference number: 2 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRLSQDS*DIIPLD
Trigger: GTCTAGTGGTATAATATCTCAGGAATCTTGGCTGAG...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCCTATTACTGGACTCCTaGCCCTCTACTCTACCCACA +
Preference number: 2 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTLLLDS*PSTLPT
Trigger: TGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAG...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACAAGAATTCTATTACTaGACTCCTGGCCCTCTACTC +
Preference number: 2 (lower is better)
Translates to: TTLGCSNVLITATEGNTSQEFYY*TPGPLL
Trigger: GAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACTCAGCCAAGATTCCTaGGATATTATACCACTAGAC +
Preference number: 2 (lower is better)
Translates to: TTLGCSNVLITATEGNTSLSQDS*DIIPLD
Trigger: GTCTAGTGGTATAATATCTCAGGAATCTTGGCTGAG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAAAACCACTAAACCACTaGACTACCCCAAGAAGGTTA +
Preference number: 2 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLKPLNH*TTPRRL
Trigger: TAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTT...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCCTCAGCCAAGATTCCTaGGATATTATACCACTAGAC +
Preference number: 2 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTLSQDS*DIIPLD
Trigger: GTCTAGTGGTATAATATCTCAGGAATCTTGGCTGAG...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATTTCTTGACCTGAATTaGTGGTTGCACATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLFLDLN*WLHMCV
Trigger: AACACACATGTGCAACCATCAATTCAGGTCAAGAAA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTTTCTTGACCTGAATTaGTGGTTGCACATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GCSNVLITATEGNTSSVIFLDLN*WLHMCV
Trigger: AACACACATGTGCAACCATCAATTCAGGTCAAGAAA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCAGATTTCTTCCCCATaGTTACTGTCTGAGGAGATT +
Preference number: 2 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQQISSP*LLSEEI
Trigger: AATCTCCTCAGACAGTAACCATGGGGAAGAAATCTG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCTAATATGCGATACATaGTGTCTTGGGTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: GCSNVLITATEGNTSSVILICDT*CLGFFH
Trigger: ATGAAAGAACCCAAGACATCATGTATCGCATATTAG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGTTTCTTGACCTGAATTaGTGGTTGCACATGTGTGTT +
Preference number: 2 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQFLDLN*WLHMCV
Trigger: AACACACATGTGCAACCATCAATTCAGGTCAAGAAA...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 2 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 2 (lower is better)
Translates to: GCSNVLITATEGNTSSVIFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 2 (lower is better)
Translates to: TTLGCSNVLITATEGNTSFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR GCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTTAAGTATCAACCTATaGACACAGAAACACAACACT +
Preference number: 2 (lower is better)
Translates to: GCSNVLITATEGNTSSVILSINL*TQKHNT
Trigger: AGTGTTGTGTTTCTGTGTGCATAGGTTGATACTTAA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR TCA 72 bp ACCACTAAACCACTGAACTACCCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATGTTCCAGAAATGGTGC +
Preference number: 3 (lower is better)
Translates to: TTKPLNYPKKVT*PPRARMFQKWC
Trigger: GCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR TCA 72 bp TCTGACGCACACCTGGATTATAAACCACTAAACCACTaGACTACCCCAAGAAGGTTACGTGACCTCCCAGAG +
Preference number: 3 (lower is better)
Translates to: SDAHLDYKPLNH*TTPRRLRDLPE
Trigger: CTCTGGGAGGTCACGTAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTTATAATCCAGGTGTGCGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 3 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATGGCTGAGTAGGCTTTaGTGTGCTACAATCTTCTAT +
Preference number: 3 (lower is better)
Translates to: TTLGCSNVLITATEGNTSWLSRL*CATIFY
Trigger: ATAGAAGATTGTAGCACACAAAAGCCTACTCAGCCA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 3 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCGCGATACATGATGTCTaGGGTTCTTTCATGTTTAAT +
Preference number: 3 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTAIHDV*GSFMFN
Trigger: ATTAAACATGAAAGAACCCAAGACATCATGTATCGC...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 3 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR-3UTR CAA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTAGAGACAGTAATAACTaGTCAGGAGTTTCCAGAATT +
Preference number: 3 (lower is better)
Translates to: KQMPETVITCQEFPEFNSRDSNN*SGVSRI
Trigger: AATTCTGGAAACTCCTGACAAGTTATTACTGTCTCT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
3UTR TCA 72 bp AGGCTTTTGTGTGCTACAATCTTCTATTTCTTGACCTaGATTGATGGTTGCACATGTGTGTTCATTTTAATT +
Preference number: 3 (lower is better)
Translates to: RLLCATIFYFLT*IDGCTCVFILI
Trigger: AATTAAAATGAACACACATGTGCAACCATCAATTCAGGTCAAGAAATAGAAGATTGTAGCACACAAAAGCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCACACAGGCTGCCTCCTTaGCGCGTCTCTCAATCTCAG +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAHRLPP*RVSQSQ
Trigger: CTGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTG...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAGGCGTCTATACACCATaGTGCCCCAGCTCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAGVYTP*CPSSVN
Trigger: GTTAACTGAGCTGGGGCATCATGGTGTATAGACGCC...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAGACTGGGAGAATGGCTaGGTAGGCTTTTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGADWENG*VGFCVL
Trigger: TAGCACACAAAAGCCTACTCAGCCATTCTCCCAGTC...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACCTCAGGATCTCAGGATaGGTGCGCTCGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNLRISG*VRSEAA
Trigger: CGCTGCCTCCGAGCGCACGCATCCTGAGATCCTGAG...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCGCTTGGAAACCCATCTaGGTTGATGACAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFAWKPI*VDDRRR
Trigger: CCTCCTTCTGTCATCAACTCAGATGGGTTTCCAAGC...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAGAAGTACTGAAGCCATaGCAGCCAAGATGCAATGGT +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAEVLKP*QPRCNG
Trigger: ACCATTGCATCTTGGCTGTCATGGCTTCAGTACTTC...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPPKKVT*PPRARM
Trigger: CATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTTCCTCCACAGGCTaGCTCCTTGCCGCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSSSSTG*LLAASL
Trigger: GAGAGACGCGGCAAGGAGGCAGCCTGTGGAGGAACT...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR GCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGGATCTCAGGATGCGTaGGCTCGGAGGCAGCGCTTT +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLGSQDA*ARRQRF
Trigger: AAAGCGCTGCCTCCGAGCGCACGCATCCTGAGATCC...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR GCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCACTAATAACGAAGATTTaGCTCCACCTGTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGALITKI*LHLWVP
Trigger: TGGGACCCACAGGTGGAGGCAAATCTTCGTTATTAG...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCCTATGGCCAGTGCCATaGAACTGGCTGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFLWPVP*NWLNKP
Trigger: TGGCTTATTCAGCCAGTTCCATGGCACTGGCCATAG...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTATCCCAAGGCCTCCTaGGCAGGCCCGTGGAACATA +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIYPKAS*AGPWNI
Trigger: TATGTTCCACGGGCCTGCTCAGGAGGCCTTGGGATA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATATCCCAAGGCCTCCTaGGCAGGCCCGTGGAACATA +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSYPKAS*AGPWNI
Trigger: TATGTTCCACGGGCCTGCTCAGGAGGCCTTGGGATA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCACCGCTAATTTTTCTATaGGTGGCTTATCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAPLIFL*VAYPAW
Trigger: CCAAGCAGGATAAGCCACTCATAGAAAAATTAGCGG...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCATCACCCCCGGAAAGTTaGTGTAATTCAGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGASPPES*CNSAFV
Trigger: GACAAAAGCTGAATTACATCAACTTTCCGGGGGTGA...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCAAGCCAAGGCCACGTaGTTCTTCCACAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIQAKAT*FFHKPQ
Trigger: CTGGGGCTTGTGGAAGAATCACGTGGCCTTGGCTTG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACAAGCCAAGGCCACGTaGTTCTTCCACAAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLQAKAT*FFHKPQ
Trigger: CTGGGGCTTGTGGAAGAATCACGTGGCCTTGGCTTG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTGCTGTGCAACAGTGTaGTGGCAAGGGAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFCCATV*WQGNRK
Trigger: TTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACCCAAATTGATGTTGTaGCAGAATGTCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPPKLML*QNVRAP
Trigger: GGGTGCCCTGACATTCTGTCACAACATCAATTTGGG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAATGAGTGGCTTATCCTaGTTGGAAGGCTCTATGATC +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAMSGLS*LEGSMI
Trigger: GATCATAGAGCCTTCCAAGCAGGATAAGCCACTCAT...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCATGTTGCATTGAGTCCTaGGCAGAAGTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGACCIES*AEVLSQ
Trigger: TTGGGACAAAACTTCTGCCCAGGACTCAATGCAACA...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGTATCCCAAGGCCTCCTaGGCAGGCCCGTGGAACATA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQYPKAS*AGPWNI
Trigger: TATGTTCCACGGGCCTGCTCAGGAGGCCTTGGGATA...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGGCTTGGAAACCCATCTaGGTTGATGACAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRAWKPI*VDDRRR
Trigger: CCTCCTTCTGTCATCAACTCAGATGGGTTTCCAAGC...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTACCCAGCAAGTTTTTaGATGAACGCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFYPASF*MNAWKP
Trigger: GGGTTTCCAAGCGTTCATTCAAAAACTTGCTGGGTA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCAAAAGAGTTCCACGGCTaGAACACTGCTGAAACACTG +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPKEFHG*NTAETL
Trigger: CAGTGTTTCAGCAGTGTTTCAGCCGTGGAACTCTTT...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTGTTTCCTGTTGCATTaGGTCCTGGGCAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFCFLLH*VLGRSF
Trigger: AAAACTTCTGCCCAGGACTCAATGCAACAGGAAACA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACTAATAACGAAGATTTaGCTCCACCTGTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPLITKI*LHLWVP
Trigger: TGGGACCCACAGGTGGAGGCAAATCTTCGTTATTAG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAAGGAACTTTCCTTCCTaGCTGCTCTTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLRNFPS*LLLGQE
Trigger: CTCCTGCCCCAAGAGCAGGCAGGAAGGAAAGTTCCT...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAATGCCTTCAGGTCATTaGAAGCTGTCGCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSMPSGH*KLSRGS
Trigger: GCTTCCCCGCGACAGCTTCCAATGACCTGAAGGCAT...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTCTGACCTGCTGCTATaGCCAGTGCCATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVISDLLL*PVPWNW
Trigger: CCAGTTCCATGGCACTGGCCATAGCAGCAGGTCAGA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAGGGCTAGATGAAATGTaGTCTCCTGAATTGAATCCT +
Preference number: 4 (lower is better)
Translates to: TPRRLRDLPELECSRNGAGLDEM*SPELNP
Trigger: AGGATTCAATTCAGGAGACCACATTTCATCTAGCCC...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACGGCTGAAACACTGCTaGAACACTGGTTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLRLKHC*NTGWSS
Trigger: TGACGACCAACCAGTGTTTCAGCAGTGTTTCAGCCG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACGGCTGAAACACTGCTaGAACACTGGTTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSRLKHC*NTGWSS
Trigger: TGACGACCAACCAGTGTTTCAGCAGTGTTTCAGCCG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGGGAATGCTGAAGTACTaGAGCCATGACAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRGMLKY*SHDSQD
Trigger: ATCTTGGCTGTCATGGCTTCAGTACTTCAGCATTCC...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCCCAAGAAGGTTACGTaGCCTCCCAGAGCTAGAATG +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIPKKVT*PPRARM
Trigger: CATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGGCGTCTATACACCATaGTGCCCCAGCTCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLGVYTP*CPSSVN
Trigger: GTTAACTGAGCTGGGGCATCATGGTGTATAGACGCC...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCTCTGACCTGCTGCTATaGCCAGTGCCATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFSDLLL*PVPWNW
Trigger: CCAGTTCCATGGCACTGGCCATAGCAGCAGGTCAGA...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTCTGACCTGCTGCTATaGCCAGTGCCATGGAACTGG +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTSDLLL*PVPWNW
Trigger: CCAGTTCCATGGCACTGGCCATAGCAGCAGGTCAGA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGTACCCAGCAAGTTTTTaGATGAACGCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRYPASF*MNAWKP
Trigger: GGGTTTCCAAGCGTTCATTCAAAAACTTGCTGGGTA...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAACTGTGACAATGATCTaGGCTATAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTETVTMI*AIEAWG
Trigger: TCCCCAGGCCTCTATAGCTCAGATCATTGTCACAGT...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCCGGCTGAAACACTGCTaGAACACTGGTTGGTCGTCA +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTRLKHC*NTGWSS
Trigger: TGACGACCAACCAGTGTTTCAGCAGTGTTTCAGCCG...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTTTCTTGACCTGAATTaGTGGTTGCACATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFFLDLN*WLHMCV
Trigger: AACACACATGTGCAACCATCAATTCAGGTCAAGAAA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGACTGGGAGAATGGCTaGGTAGGCTTTTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLDWENG*VGFCVL
Trigger: TAGCACACAAAAGCCTACTCAGCCATTCTCCCAGTC...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCGGCGTCTATACACCATaGTGCCCCAGCTCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTGVYTP*CPSSVN
Trigger: GTTAACTGAGCTGGGGCATCATGGTGTATAGACGCC...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAACCCAAATTGATGTTGTaGCAGAATGTCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTEPKLML*QNVRAP
Trigger: GGGTGCCCTGACATTCTGTCACAACATCAATTTGGG...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACAAGCATGTGCACGGTaGGTTCCTAAATCCTACCCA +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSQACAR*VPKSYP
Trigger: TGGGTAGGATTTAGGAACGCACCGTGCACATGCTTG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR GCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGGTCCAAGAAGAAGTCTaGAGGGTTATTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRVQEEV*RVIIGL
Trigger: GAGGCCTATAATAACCCTGCAGACTTCTTCTTGGAC...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCCCCAAAGTAGATCCTaGAGCTACCAGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIPQSRS*SYQGTL
Trigger: CAATGTTCCCTGGTAGCTGCAGGATCTACTTTGGGG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACCCCAAAGTAGATCCTaGAGCTACCAGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLPQSRS*SYQGTL
Trigger: CAATGTTCCCTGGTAGCTGCAGGATCTACTTTGGGG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAACCAGTGCCATGGAACTaGCTGAATAAGCCACCATCA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTEPVPWN*LNKPPS
Trigger: TGATGGTGGCTTATTCAGCCAGTTCCATGGCACTGG...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCTATGGCCAGTGCCATaGAACTGGCTGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVILWPVP*NWLNKP
Trigger: TGGCTTATTCAGCCAGTTCCATGGCACTGGCCATAG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAACTATGGCCAGTGCCATaGAACTGGCTGAATAAGCCA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTELWPVP*NWLNKP
Trigger: TGGCTTATTCAGCCAGTTCCATGGCACTGGCCATAG...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACAGATTTCTTCCCCATaGTTACTGTCTGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPQISSP*LLSEEI
Trigger: AATCTCCTCAGACAGTAACCATGGGGAAGAAATCTG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACACTATTACTGGACTCCTaGCCCTCTACTCTACCCACA +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTLLLDS*PSTLPT
Trigger: TGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAG...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTACCAAATCCAGGAGTaGTCAGATTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFYQIQE*SDSFMK
Trigger: CTTCATAAAGGAATCTGACCACTCCTGGATTTGGTA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTGGTTCCAGTCAGCGTaGGATCCTCTTCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTWFQSA*DPLLAF
Trigger: GAATGCCAGAAGAGGATCCCACGCTGACTGGAACCA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR TCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAACACCACGGATAAACTaGGTTCCAACCTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTETPRIN*VPTLES
Trigger: AGACTCCAAGGTTGGAACTCAGTTTATCCGTGGTGT...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCACTGTGACAATGATCTaGGCTATAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTTVTMI*AIEAWG
Trigger: TCCCCAGGCCTCTATAGCTCAGATCATTGTCACAGT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATGCCATGGAACTGGCTaGATAAGCCACCATCATAAG +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLCHGTG*ISHHHK
Trigger: CTTATGATGGTGGCTTATTCAGCCAGTTCCATGGCA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTGAAGTACTGAAGCCATaGCAGCCAAGATGCAATGGT +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIEVLKP*QPRCNG
Trigger: ACCATTGCATCTTGGCTGTCATGGCTTCAGTACTTC...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGAAACCACTAAACCACTaGACTACCCCAAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRKPLNH*TTPRRL
Trigger: TAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTT...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGGACTGGGAGAATGGCTaGGTAGGCTTTTGTGTGCTA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQDWENG*VGFCVL
Trigger: TAGCACACAAAAGCCTACTCAGCCATTCTCCCAGTC...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCTTAGTGGAAAAGTGGTaGAATCTGAATATTGTGTGC +
Preference number: 4 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFLVEKW*NLNIVC
Trigger: GCACACAATATTCAGATTTCACCACTTTTCCACTAA...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACGCTACCAGGGAACATTaGGGCTTTCCGAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNATREH*GFPSKL
Trigger: TAGTTTACTCGGAAAGCCTCAATGTTCCCTGGTAGC...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAATACTGCACTCAGTTATaGTGTGTGACGCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTEYCTQL*CVTLEA
Trigger: TGCTTCCAGCGTCACACATCATAACTGAGTGCAGTA...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATCTTTCTTTGCCTTCTaGAGTGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLSFFAF*SAGITG
Trigger: GCCTGTAATCCCAGCACTTCAGAAGGCAAAGAAAGA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACTCTCACCGTCAGAGTaGCCATCACAACATCATCTT +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSLSPSE*PSQHHL
Trigger: AAGATGATGTTGTGATGGGCACTCTGACGGTGAGAG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTAGGAACTTTCCTTCCTaGCTGCTCTTGGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSRNFPS*LLLGQE
Trigger: CTCCTGCCCCAAGAGCAGGCAGGAAGGAAAGTTCCT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCTTTGCCTTCTGAAGTaGTGGGATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQLCLLK*WDYRRE
Trigger: CTCACGCCTGTAATCCCAGCACTTCAGAAGGCAAAG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAATGCCTTCAGGTCATTaGAAGCTGTCGCGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLMPSGH*KLSRGS
Trigger: GCTTCCCCGCGACAGCTTCCAATGACCTGAAGGCAT...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACGTAAATCCATATCGTaGAATGCTGAAGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPRKSIS*NAEVLK
Trigger: CTTCAGTACTTCAGCATTCCACGATATGGATTTACG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCACACCACGGATAAACTaGGTTCCAACCTTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFTPRIN*VPTLES
Trigger: AGACTCCAAGGTTGGAACTCAGTTTATCCGTGGTGT...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGACAGTGATAACCAGCTaGTTCAAAGTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLTVITS*FKVSQG
Trigger: GCCTTGGGATACTTTGAATCAGCTGGTTATCACTGT...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTACAGTGATAACCAGCTaGTTCAAAGTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVITVITS*FKVSQG
Trigger: GCCTTGGGATACTTTGAATCAGCTGGTTATCACTGT...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACCGCTAATTTTTCTATaGGTGGCTTATCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLPLIFL*VAYPAW
Trigger: CCAAGCAGGATAAGCCACTCATAGAAAAATTAGCGG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACACCGCTAATTTTTCTATaGGTGGCTTATCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTPLIFL*VAYPAW
Trigger: CCAAGCAGGATAAGCCACTCATAGAAAAATTAGCGG...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATCACCCCCGGAAAGTTaGTGTAATTCAGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSSPPES*CNSAFV
Trigger: GACAAAAGCTGAATTACATCAACTTTCCGGGGGTGA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGAAAGAGTTCCACGGCTaGAACACTGCTGAAACACTG +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQKEFHG*NTAETL
Trigger: CAGTGTTTCAGCAGTGTTTCAGCCGTGGAACTCTTT...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAAAGAGTTCCACGGCTaGAACACTGCTGAAACACTG +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTKEFHG*NTAETL
Trigger: CAGTGTTTCAGCAGTGTTTCAGCCGTGGAACTCTTT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTGCCATGGAACTGGCTaGATAAGCCACCATCATAAG +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTCHGTG*ISHHHK
Trigger: CTTATGATGGTGGCTTATTCAGCCAGTTCCATGGCA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCGAAGTACTGAAGCCATaGCAGCCAAGATGCAATGGT +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTEVLKP*QPRCNG
Trigger: ACCATTGCATCTTGGCTGTCATGGCTTCAGTACTTC...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCGGAATGCTGAAGTACTaGAGCCATGACAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTGMLKY*SHDSQD
Trigger: ATCTTGGCTGTCATGGCTTCAGTACTTCAGCATTCC...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTCATATCGTGGAATGCTaGAGTACTGAAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIHIVEC*STEAMT
Trigger: TGTCATGGCTTCAGTACTTCAGCATTCCACGATATG...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACCATATCGTGGAATGCTaGAGTACTGAAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNHIVEC*STEAMT
Trigger: TGTCATGGCTTCAGTACTTCAGCATTCCACGATATG...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATGTTTCCTGTTGCATTaGGTCCTGGGCAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSCFLLH*VLGRSF
Trigger: AAAACTTCTGCCCAGGACTCAATGCAACAGGAAACA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGCCACAATCTTCTATTTCTTaGCCTGAATTGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: IQEWSDSFMKVDLELLRPQSSIS*PELMVA
Trigger: TGCAACCATCAATTCAGGTCAAGAAATAGAAGATTG...TGGCCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGGCTACCAGGGAACATTaGGGCTTTCCGAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQATREH*GFPSKL
Trigger: TAGTTTACTCGGAAAGCCTCAATGTTCCCTGGTAGC...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCTAATAACGAAGATTTaGCTCCACCTGTGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQLITKI*LHLWVP
Trigger: TGGGACCCACAGGTGGAGGCAAATCTTCGTTATTAG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCCTCTCACCGTCAGAGTaGCCATCACAACATCATCTT +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTLSPSE*PSQHHL
Trigger: AAGATGATGTTGTGATGGGCACTCTGACGGTGAGAG...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTGTCCAAGAAGAAGTCTaGAGGGTTATTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIVQEEV*RVIIGL
Trigger: GAGGCCTATAATAACCCTGCAGACTTCTTCTTGGAC...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAGTCCAAGAAGAAGTCTaGAGGGTTATTATAGGCCTC +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLVQEEV*RVIIGL
Trigger: GAGGCCTATAATAACCCTGCAGACTTCTTCTTGGAC...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAATGAGTGGCTTATCCTaGTTGGAAGGCTCTATGATC +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTMSGLS*LEGSMI
Trigger: GATCATAGAGCCTTCCAAGCAGGATAAGCCACTCAT...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAGGTCATGAGAAGTGTTaGTACAGAAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSGHEKC*YRNHTL
Trigger: CAGAGTGTGGTTTCTGTAGCAACACTTCTCATGACC...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGGTCATGAGAAGTGTTaGTACAGAAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLGHEKC*YRNHTL
Trigger: CAGAGTGTGGTTTCTGTAGCAACACTTCTCATGACC...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAGGATTGTTTCCTGTTaGATTGAGTCCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTERIVSC*IESWAE
Trigger: TTCTGCCCAGGACTCAATGCAACAGGAAACAATCCT...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAACTGAGTTCCAACCTTaGAGTCTGCCACTTTATCCA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTETEFQP*SLPLYP
Trigger: TGGATAAAGTGGCAGACTCCAAGGTTGGAACTCAGT...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACTGTTGCATTGAGTCCTaGGCAGAAGTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNCCIES*AEVLSQ
Trigger: TTGGGACAAAACTTCTGCCCAGGACTCAATGCAACA...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACATGTTGCATTGAGTCCTaGGCAGAAGTTTTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTCCIES*AEVLSQ
Trigger: TTGGGACAAAACTTCTGCCCAGGACTCAATGCAACA...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCAAGAATTCTATTACTaGACTCCTGGCCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLQEFYY*TPGPLL
Trigger: GAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCACAGTGATAACCAGCTaGTTCAAAGTATCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFTVITS*FKVSQG
Trigger: GCCTTGGGATACTTTGAATCAGCTGGTTATCACTGT...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTCACCCCCGGAAAGTTaGTGTAATTCAGCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTSPPES*CNSAFV
Trigger: GACAAAAGCTGAATTACATCAACTTTCCGGGGGTGA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAGCTTGGAAACCCATCTaGGTTGATGACAGAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLAWKPI*VDDRRR
Trigger: CCTCCTTCTGTCATCAACTCAGATGGGTTTCCAAGC...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGTACCCAGCAAGTTTTTaGATGAACGCTTGGAAACCC +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQYPASF*MNAWKP
Trigger: GGGTTTCCAAGCGTTCATTCAAAAACTTGCTGGGTA...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTACTGTGACAATGATCTaGGCTATAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSTVTMI*AIEAWG
Trigger: TCCCCAGGCCTCTATAGCTCAGATCATTGTCACAGT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCATATCGTGGAATGCTaGAGTACTGAAGCCATGACA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQHIVEC*STEAMT
Trigger: TGTCATGGCTTCAGTACTTCAGCATTCCACGATATG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCTGTTTCCTGTTGCATTaGGTCCTGGGCAGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFCFLLH*VLGRSF
Trigger: AAAACTTCTGCCCAGGACTCAATGCAACAGGAAACA...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTAAACCACTAAACCACTaGACTACCCCAAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIKPLNH*TTPRRL
Trigger: TAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTT...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTCCCAAATTGATGTTGTaGCAGAATGTCAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSPKLML*QNVRAP
Trigger: GGGTGCCCTGACATTCTGTCACAACATCAATTTGGG...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGGGTCATGAGAAGTGTTaGTACAGAAACCACACTCTG +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQGHEKC*YRNHTL
Trigger: CAGAGTGTGGTTTCTGTAGCAACACTTCTCATGACC...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAGGATTGTTTCCTGTTaGATTGAGTCCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTRIVSC*IESWAE
Trigger: TTCTGCCCAGGACTCAATGCAACAGGAAACAATCCT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAGAGAGATCGATGCCCTaGTTTACCAAATATTCTTCG +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTEERSMP*FTKYSS
Trigger: CGAAGAATATTTGGTAAAGCAGGGCATCGATCTCTC...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACGAGAGATCGATGCCCTaGTTTACCAAATATTCTTCG +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNERSMP*FTKYSS
Trigger: CGAAGAATATTTGGTAAAGCAGGGCATCGATCTCTC...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGAGGGTGAGAGATCGATaGCCTGCTTTACCAAATATT +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLRVRDR*PALPNI
Trigger: AATATTTGGTAAAGCAGGGCATCGATCTCTCACCCT...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACAGGGTGAGAGATCGATaGCCTGCTTTACCAAATATT +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNRVRDR*PALPNI
Trigger: AATATTTGGTAAAGCAGGGCATCGATCTCTCACCCT...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACAATGGCTTTGCTCTGTaGGTAAACTTCCTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNNGFAL*VNFLCF
Trigger: AAAGCACAGGAAGTTTACGCACAGAGCAAAGCCATT...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATCTAGCAAATGGCTTTaGTCTGTGCGTAAACTTCCT +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSSSKWL*SVRKLP
Trigger: AGGAAGTTTACGCACAGAGCAAAGCCATTTGCTAGA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACCAGATTTCTTCCCCATaGTTACTGTCTGAGGAGATT +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNQISSP*LLSEEI
Trigger: AATCTCCTCAGACAGTAACCATGGGGAAGAAATCTG...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTCTATTACTGGACTCCTaGCCCTCTACTCTACCCACA +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSLLLDS*PSTLPT
Trigger: TGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAG...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTACTATTACTGGACTCCTaGCCCTCTACTCTACCCACA +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLLLLDS*PSTLPT
Trigger: TGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAG...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAGGGCTAGATGAAATGTaGTCTCCTGAATTGAATCCT +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLGLDEM*SPELNP
Trigger: AGGATTCAATTCAGGAGACCACATTTCATCTAGCCC...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTGGGCTAGATGAAATGTaGTCTCCTGAATTGAATCCT +
Preference number: 4 (lower is better)
Translates to: GCSNVLITATEGNTSSVIGLDEM*SPELNP
Trigger: AGGATTCAATTCAGGAGACCACATTTCATCTAGCCC...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTGGAATGCTGAAGTACTaGAGCCATGACAGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSGMLKY*SHDSQD
Trigger: ATCTTGGCTGTCATGGCTTCAGTACTTCAGCATTCC...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTTGCTGTGCAACAGTGTaGTGGCAAGGGAACAGAAAA +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSCCATV*WQGNRK
Trigger: TTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCA...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGAAACCACTAAACCACTaGACTACCCCAAGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQKPLNH*TTPRRL
Trigger: TAACCTTCTTGGGGTAGTTCAGTGGTTTAGTGGTTT...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACTTTCTTGACCTGAATTaGTGGTTGCACATGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNFLDLN*WLHMCV
Trigger: AACACACATGTGCAACCATCAATTCAGGTCAAGAAA...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTATCTTTCTCAGTTATaGTGTGTGACGCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTYLSQL*CVTLEA
Trigger: TGCTTCCAGCGTCACACATCATAACTGAGAAAGATA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515655.5
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAGCAATTCTCTTAACTTaGAGATACAGTCAAACCGGT +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLAILLT*RYSQTG
Trigger: ACCGGTTTGACTGTATCTTCAAGTTAAGAGAATTGC...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR GCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCGTATCTTTCTCTTTGTaGCGCGGAATTCTGATGACA +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFVSFSL*RGILMT
Trigger: TGTCATCAGAATTCCGCGGCACAAAGAGAAAGATAC...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACACGTAAATCCATATCGTaGAATGCTGAAGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTRKSIS*NAEVLK
Trigger: CTTCAGTACTTCAGCATTCCACGATATGGATTTACG...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAACCAATTCTAGCAAATaGCTTTGCTCTGTGCGTAAA +
Preference number: 4 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTETNSSK*LCSVRK
Trigger: TTTACGCACAGAGCAAAGCCATTTGCTAGAATTGGT...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR TCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACTAATATGCGATACATaGTGTCTTGGGTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSLICDT*CLGFFH
Trigger: ATGAAAGAACCCAAGACATCATGTATCGCATATTAG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACATTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACAATCTTCTATTTCTTaGCCTGAATTGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLQSSIS*PELMVA
Trigger: TGCAACCATCAATTCAGGTCAAGAAATAGAAGATTG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCAATCTTCTATTTCTTaGCCTGAATTGATGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLQSSIS*PELMVA
Trigger: TGCAACCATCAATTCAGGTCAAGAAATAGAAGATTG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAATGAGTGGCTTATCCTaGTTGGAAGGCTCTATGATC +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLMSGLS*LEGSMI
Trigger: GATCATAGAGCCTTCCAAGCAGGATAAGCCACTCAT...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACCCCAAAAATTCATTATaGTGCAAAGCCGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNPKNSL*CKAVNP
Trigger: TGGATTTACGGCTTTGCAGCATAATGAATTTTTGGG...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACACCCAAAAATTCATTATaGTGCAAAGCCGTAAATCCA +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTPKNSL*CKAVNP
Trigger: TGGATTTACGGCTTTGCAGCATAATGAATTTTTGGG...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTAGGATTGTTTCCTGTTaGATTGAGTCCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSRIVSC*IESWAE
Trigger: TTCTGCCCAGGACTCAATGCAACAGGAAACAATCCT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACATTCGCCAGTACATGTTaGATAGTTACAAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTFASTC*IVTRIV
Trigger: AACAATCCTTGTAACTATGCAACATGTACTGGCGAA...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCATTCGCCAGTACATGTTaGATAGTTACAAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: TTLGCSNVLITATEGNTSFASTC*IVTRIV
Trigger: AACAATCCTTGTAACTATGCAACATGTACTGGCGAA...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGTTCGCCAGTACATGTTaGATAGTTACAAGGATTGTT +
Preference number: 4 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLFASTC*IVTRIV
Trigger: AACAATCCTTGTAACTATGCAACATGTACTGGCGAA...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTACTGAGTTCCAACCTTaGAGTCTGCCACTTTATCCA +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSTEFQP*SLPLYP
Trigger: TGGATAAAGTGGCAGACTCCAAGGTTGGAACTCAGT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCCGTAAATCCATATCGTaGAATGCTGAAGTACTGAAG +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTRKSIS*NAEVLK
Trigger: CTTCAGTACTTCAGCATTCCACGATATGGATTTACG...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTCAAGAATTCTATTACTaGACTCCTGGCCCTCTACTC +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSQEFYY*TPGPLL
Trigger: GAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTG...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTACCAAATCCAGGAGTaGTCAGATTCCTTTATGAAG +
Preference number: 4 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTYQIQE*SDSFMK
Trigger: CTTCATAAAGGAATCTGACCACTCCTGGATTTGGTA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CCA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACATTCTTTCTCGATCACTaGGATTCAAACAAAAGACCT +
Preference number: 4 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTFFLDH*DSNKRP
Trigger: AGGTCTTTTGTTTGAATCCCAGTGATCGAGAAAGAA...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR TCA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCTTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 4 (lower is better)
Translates to: MRKQMPETVITCQEFPEFFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGTTCTATTTCTTGACCTaGATTGATGGTTGCACATGT +
Preference number: 4 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQFYFLT*IDGCTC
Trigger: ACATGTGCAACCATCAATTCAGGTCAAGAAATAGAA...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTGAGAGATCGATGCCCTaGTTTACCAAATATTCTTCG +
Preference number: 4 (lower is better)
Translates to: KQMPETVITCQEFPEFNSERSMP*FTKYSS
Trigger: CGAAGAATATTTGGTAAAGCAGGGCATCGATCTCTC...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACTTAAGTATCAACCTATaGACACAGAAACACAACACT +
Preference number: 4 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNLSINL*TQKHNT
Trigger: AGTGTTGTGTTTCTGTGTGCATAGGTTGATACTTAA...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR TCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTATTAGTGGAAAAGTGGTaGAATCTGAATATTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLLVEKW*NLNIVC
Trigger: GCACACAATATTCAGATTTCACCACTTTTCCACTAA...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR GCA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTATTAAGTATCAACCTATaGACACAGAAACACAACACT +
Preference number: 4 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLLSINL*TQKHNT
Trigger: AGTGTTGTGTTTCTGTGTGCATAGGTTGATACTTAA...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS CCA 90 bp TCGCGCGGCGGCCGGCGTGGGAGGCGCTGCGGCTGGAGGTCACGATaGGAGCCGGCGGGTGGCCGCCTGGGGAGACCCGGACATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SRGGRRGRRCGWRSR*EPAGGRLGRPGHPG
Trigger: CCCTGGATGTCCGGGTCTCCCCAGGCGGCCACCCGCCGGCTCCCATCGTGACCTCCAGCCGCAGCGCCTCCCACGCCGGCCGCCGCGCGA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CCA 90 bp GGCGCTGCGGCTGGAGGTCACGATGGGAGCCGGCGGGTGGCCGCCTaGGGAGACCCGGACATCCAGGGGACGAGCTCAGGCAGCGCTGAC +
Preference number: 5 (lower is better)
Translates to: GAAAGGHDGSRRVAA*GDPDIQGTSSGSAD
Trigger: GTCAGCGCTGCCTGAGCTCGTCCCCTGGATGTCCGGGTCTCCCCAGGCGGCCACCCGCCGGCTCCCATCGTGACCTCCAGCCGCAGCGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS TCA 90 bp GTTTGGTCGCCGTCACTGGCCGGAGCGCCGAAGCACCGGGGACGCTaGCGCACAGGTTGCCCAGTCACAAGCGCTGCTCGCACCCAGAGC +
Preference number: 5 (lower is better)
Translates to: VWSPSLAGAPKHRGR*RTGCPVTSAARTQS
Trigger: GCTCTGGGTGCGAGCAGCGCTTGTGACTGGGCAACCTGTGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCGGCCAGTGACGGCGACCAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS TCA 90 bp CGCCTGGGGAGACCCGGACATCCAGGGGACGAGCTCAGGCAGCGCTaGCACGAACTTCCTAAGCCGCGCTTCGGGCTGTGGACCGCCAGA +
Preference number: 5 (lower is better)
Translates to: RLGRPGHPGDELRQR*HELPKPRFGLWTAR
Trigger: TCTGGCGGTCCACAGCCCGAAGCGCGGCTTAGGAAGTTCGTGTCAGCGCTGCCTGAGCTCGTCCCCTGGATGTCCGGGTCTCCCCAGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS GCA 90 bp TGCCTCCTTGCCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGCACTaGCTCTTCCCTCCTGCGCGCCCGGAACCTTTTGAGTGGGCACAG +
Preference number: 5 (lower is better)
Translates to: CLLAASLNLSGSGGH*LFPPARPEPFEWAQ
Trigger: CTGTGCCCACTCAAAAGGTTCCGGGCGCGCAGGAGGGAAGAGGCAGTGCCCGCCACTCCCACTGAGATTGAGAGACGCGGCAAGGAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CCA 90 bp TTTTTATCTTTCTCGTCTGACCTAGCTGGGTTTGGTCGCCGTCACTaGCCGGAGCGCCGAAGCACCGGGGACGCTGACGCACAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: FLSFSSDLAGFGRRH*PERRSTGDADAQVA
Trigger: GGCAACCTGTGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCGGCCAGTGACGGCGACCAAACCCAGCTAGGTCAGACGAGAAAGATAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS TCA 90 bp AGAGCTTCTTCTCTACCACAAAGAGTTCCACGGCTGAAACACTGCTaGAACACTGGTTGGTCGTCAGGAAGAAGAGAACCCCAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RASSLPQRVPRLKHC*NTGWSSGRREPQLC
Trigger: ACAGAGCTGGGGTTCTCTTCTTCCTGACGACCAACCAGTGTTTCAGCAGTGTTTCAGCCGTGGAACTCTTTGTGGTAGAGAAGAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCACTGCTGAAACACTGGTaGGTCGTCAGGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: TPRRLRDLPELECSRNGALLKHW*VVRKKR
Trigger: TCTCTTCTTCCTGACGACCAACCAGTGTTTCAGCAG...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ACAACACTTGGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCACCACAGGCTGCCTCCTaGCCGCGTCTCTCAATCTCA +
Preference number: 5 (lower is better)
Translates to: TTLGCSNVLITATEGNTSPQAAS*PRLSIS
Trigger: TGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTGG...TGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCCAAGTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS-3UTR CAA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCGGAAACCCATCTGAGTaGATGACAGAAGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFGNPSE*MTEGGG
Trigger: ACCACCTCCTTCTGTCATCAACTCAGATGGGTTTCC...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATGGTGCAAGAATTCTATTACTGGACTCCTGGCCCTCTACTCTACCCACAGTTCAATGAGAGAGGAAACTaGGCAGCCCCCAAAGTAGAT +
Preference number: 5 (lower is better)
Translates to: MVQEFYYWTPGPLLYPQFNERGN*AAPKVD
Trigger: ATCTACTTTGGGGGCTGCCAAGTTTCCTCTCTCATT...GAACTGTGGGTAGAGTAGAGGGCCAGGAGTCCAGTAATAGAATTCTTGCACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAAATGCCTTCAGGTCATaGGAAGCTGTCGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTNAFRS*EAVAGK
Trigger: CTTCCCCGCGACAGCTTCCAATGACCTGAAGGCATT...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGTCTAATAACGAAGATTaGCCTCCACCTGTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRSNNED*PPPVGP
Trigger: GGGACCCACAGGTGGAGGCAAATCTTCGTTATTAGA...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGGGAAACCCATCTGAGTaGATGACAGAAGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRGNPSE*MTEGGG
Trigger: ACCACCTCCTTCTGTCATCAACTCAGATGGGTTTCC...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCATTACCCAGCAAGTTTTaGAATGAACGCTTGGAAACC +
Preference number: 5 (lower is better)
Translates to: TPRRLRDLPELECSRNGALPSKF*NERLET
Trigger: GGTTTCCAAGCGTTCATTCAAAAACTTGCTGGGTAA...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATGCCTTCAGGTCATaGGAAGCTGTCGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: MRKQMPETVITCQEFPEFNAFRS*EAVAGK
Trigger: CTTCCCCGCGACAGCTTCCAATGACCTGAAGGCATT...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAATGCCTTCAGGTCATaGGAAGCTGTCGCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTNAFRS*EAVAGK
Trigger: CTTCCCCGCGACAGCTTCCAATGACCTGAAGGCATT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: TPRRLRDLPELECSRNGAISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACTGCTGAAACACTGGTaGGTCGTCAGGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLLLKHW*VVRKKR
Trigger: TCTCTTCTTCCTGACGACCAACCAGTGTTTCAGCAG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCTGCTGAAACACTGGTaGGTCGTCAGGAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLLLKHW*VVRKKR
Trigger: TCTCTTCTTCCTGACGACCAACCAGTGTTTCAGCAG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ACCCCAAGAAGGTTACGTGACCTCCCAGAGCTAGAATGTTCCAGAAATGGTGCAAGAGACAGTAATAACTaGTCAGGAGTTTCCAGAATT +
Preference number: 5 (lower is better)
Translates to: TPRRLRDLPELECSRNGARDSNN*SGVSRI
Trigger: AATTCTGGAAACTCCTGACAAGTTATTACTGTCTCT...TGCACCATTTCTGGAACATTCTAGCTCTGGGAGGTCACGTAACCTTCTTGGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS CCA 90 bp TCTCCACTACTAGCTGATTATGAACCACATTTCTTTCTCGATCACTaGGATTCAAACAAAAGACCTAATGGTTCCAGTCAGCGTGGGATC +
Preference number: 5 (lower is better)
Translates to: SPLLADYEPHFFLDH*DSNKRPNGSSQRGI
Trigger: GATCCCACGCTGACTGGAACCATTAGGTCTTTTGTTTGAATCCCAGTGATCGAGAAAGAAATGTGGTTCATAATCAGCTAGTAGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CAA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTAGTGGCTTATCCTGCTaGGAAGGCTCTATGATCTCT +
Preference number: 5 (lower is better)
Translates to: GCSNVLITATEGNTSSVISGLSC*EGSMIS
Trigger: AGAGATCATAGAGCCTTCCAAGCAGGATAAGCCACT...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCTCCAGATAATCCACTaGGATCTTTCCTTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLLQIIH*DLSLQL
Trigger: TAGCTGCAAGGAAAGATCCAAGTGGATTATCTGGAG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAGTGGCTTATCCTGCTaGGAAGGCTCTATGATCTCT +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTSGLSC*EGSMIS
Trigger: AGAGATCATAGAGCCTTCCAAGCAGGATAAGCCACT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGTCCTGGGCAGAAGTTTaGTCCCAAAAATTCATTATG +
Preference number: 5 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRSWAEV*SQKFIM
Trigger: CATAATGAATTTTTGGGACAAAACTTCTGCCCAGGA...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAATGAGAGAGGAAACTaGGCAGCCCCCAAAGTAGAT +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTNERGN*AAPKVD
Trigger: ATCTACTTTGGGGGCTGCCAAGTTTCCTCTCTCATT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515655.5
ENST00000650821.1
CDS GCA 90 bp GGGAAAGTTACATGTCAGAGAGATATTTTTGTATCTTTCTCTTTGTaGCGCGGAATTCTGATGACAGCATCTCCAACACAAACAGCAACT +
Preference number: 5 (lower is better)
Translates to: GKVTCQRDIFVSFSL*RGILMTASPTQTAT
Trigger: AGTTGCTGTTTGTGTTGGAGATGCTGTCATCAGAATTCCGCGGCACAAAGAGAAAGATACAAAAATATCTCTCTGACATGTAACTTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS CCA 90 bp ACATGTTGCATAGTTACAAGGATTGTTTCCTGTTGCATTGAGTCCTaGGCAGAAGTTTTGTCCCAAAAATTCATTATGCTGCAAAGCCGT +
Preference number: 5 (lower is better)
Translates to: TCCIVTRIVSCCIES*AEVLSQKFIMLQSR
Trigger: ACGGCTTTGCAGCATAATGAATTTTTGGGACAAAACTTCTGCCCAGGACTCAATGCAACAGGAAACAATCCTTGTAACTATGCAACATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAGGAAACCCATCTGAGTaGATGACAGAAGGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLGNPSE*MTEGGG
Trigger: ACCACCTCCTTCTGTCATCAACTCAGATGGGTTTCC...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTATTACCCAGCAAGTTTTaGAATGAACGCTTGGAAACC +
Preference number: 5 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLLPSKF*NERLET
Trigger: GGTTTCCAAGCGTTCATTCAAAAACTTGCTGGGTAA...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGCTTCGCCAGTACATGTaGCATAGTTACAAGGATTGT +
Preference number: 5 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLLRQYM*HSYKDC
Trigger: ACAATCCTTGTAACTATGCAACATGTACTGGCGAAG...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp TATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAACTTCGCCAGTACATGTaGCATAGTTACAAGGATTGT +
Preference number: 5 (lower is better)
Translates to: YLFKTIAAVQQCDGKGTELRQYM*HSYKDC
Trigger: ACAATCCTTGTAACTATGCAACATGTACTGGCGAAG...TTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGAGAGACAGTAATAACTaGTCAGGAGTTTCCAGAATT +
Preference number: 5 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRRDSNN*SGVSRI
Trigger: AATTCTGGAAACTCCTGACAAGTTATTACTGTCTCT...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATGTATCTCTTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACATGGCTGAGTAGGCTTTaGTGTGCTACAATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: MYLFKTIAAVQQCDGKGTWLSRL*CATIFY
Trigger: ATAGAAGATTGTAGCACACAAAAGCCTACTCAGCCA...TGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAAGAGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACTGGCTGAGTAGGCTTTaGTGTGCTACAATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNWLSRL*CATIFY
Trigger: ATAGAAGATTGTAGCACACAAAAGCCTACTCAGCCA...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACACAGAAACACAACACTaGGCTGTAGCAATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNTETQH*AVAMFS
Trigger: TGAGAACATTGCTACAGCCAAGTGTTGTGTTTCTGT...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGGAGCTACTTAGGATGTGGTCTCCTGAATaGAATCCTAGAACAATGAAA +
Preference number: 5 (lower is better)
Translates to: QIQEWSDSFMKVDLELLRMWSPE*NPRTMK
Trigger: TTTCATTGTTCTAGGATTCAATTCAGGAGACCACAT...CCTAAGTAGCTCCAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp GGCTGTAGCAATGTTCTCATAACAGCAACAGAGGGAAATACATCAAGTGTCATTTCCTGGGCAGAAGTTTaGTCCCAAAAATTCATTATG +
Preference number: 5 (lower is better)
Translates to: GCSNVLITATEGNTSSVISWAEV*SQKFIM
Trigger: CATAATGAATTTTTGGGACAAAACTTCTGCCCAGGA...AATGACACTTGATGTATTTCCCTCTGTTGCTGTTATGAGAACATTGCTACAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCTTCGCCAGTACATGTaGCATAGTTACAAGGATTGT +
Preference number: 5 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQLRQYM*HSYKDC
Trigger: ACAATCCTTGTAACTATGCAACATGTACTGGCGAAG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGTGGCTGAGTAGGCTTTaGTGTGCTACAATCTTCTAT +
Preference number: 5 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQWLSRL*CATIFY
Trigger: ATAGAAGATTGTAGCACACAAAAGCCTACTCAGCCA...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCACAGAAACACAACACTaGGCTGTAGCAATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTTETQH*AVAMFS
Trigger: TGAGAACATTGCTACAGCCAAGTGTTGTGTTTCTGT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTACTCCAGATAATCCACTaGGATCTTTCCTTGCAGCTA +
Preference number: 5 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLLQIIH*DLSLQL
Trigger: TAGCTGCAAGGAAAGATCCAAGTGGATTATCTGGAG...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCTCCTGGGCAGAAGTTTaGTCCCAAAAATTCATTATG +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTSWAEV*SQKFIM
Trigger: CATAATGAATTTTTGGGACAAAACTTCTGCCCAGGA...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGATCTCTTTAAAACAATaGCTGCTGTGCAACAGTGTG +
Preference number: 5 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQISLKQ*LLCNSV
Trigger: CACACTGTTGCACAGCAGCAATTGTTTTAAAGAGAT...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTAGCGATACATGATGTCTaGGGTTCTTTCATGTTTAAT +
Preference number: 5 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLAIHDV*GSFMFN
Trigger: ATTAAACATGAAAGAACCCAAGACATCATGTATCGC...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp ATACACCATGATGCCCCAGCTCAGTTAACTCCTGTAAGTGCTGAAAAGTATTTACTTTCCTCACTATCTTaGCAACTTTTCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: IHHDAPAQLTPVSAEKYLLSSLS*QLFCQS
Trigger: AGATTGACAGAAAAGTTGCAAAGATAGTGAGGAAAG...TAAATACTTTTCAGCACTTACAGGAGTTAACTGAGCTGGGGCATCATGGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTTGGAAATTACCAAATCCAGGAGTGGTCAGATTCCTTTATGAAGGTAGATCTGATGTGGTCTCCTGAATaGAATCCTAGAACAATGAAA +
Preference number: 5 (lower is better)
Translates to: LGNYQIQEWSDSFMKVDLMWSPE*NPRTMK
Trigger: TTTCATTGTTCTAGGATTCAATTCAGGAGACCACAT...CAGATCTACCTTCATAAAGGAATCTGACCACTCCTGGATTTGGTAATTTCCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp TTTAAAACAATTGCTGCTGTGCAACAGTGTGATGGCAAGGGAACAGAAAACAACAATGACCAAGATATTTaGGGGAATACAGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: FKTIAAVQQCDGKGTENNNDQDI*GNTAIL
Trigger: GAGAATTGCTGTATTCCCCAAAATATCTTGGTCATT...GTTGTTTTCTGTTCCCTTGCCATCACACTGTTGCACAGCAGCAATTGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CAA 90 bp ATGAGGAAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAGTTTTTATCTTTCTTaGCCTTCTGAAGTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: MRKQMPETVITCQEFPEFSFYLS*PSEVLG
Trigger: TCCCAGCACTTCAGAAGGCAAAGAAAGATAAAAACT...GAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTTCCTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS-3UTR CAA 90 bp AAAAATATAATGCCATGTTCCCAAATTGATGTTGTGACAGAATGTCAGGGCACCAGAGACAGTAATAACTaGTCAGGAGTTTCCAGAATT +
Preference number: 5 (lower is better)
Translates to: KNIMPCSQIDVVTECQGTRDSNN*SGVSRI
Trigger: AATTCTGGAAACTCCTGACAAGTTATTACTGTCTCT...GGTGCCCTGACATTCTGTCACAACATCAATTTGGGAACATGGCATTATATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AAACAAATGCCAGAGACAGTAATAACTTGTCAGGAGTTTCCAGAATTCAATTCTACAGAAACACAACACTaGGCTGTAGCAATGTTCTCA +
Preference number: 5 (lower is better)
Translates to: KQMPETVITCQEFPEFNSTETQH*AVAMFS
Trigger: TGAGAACATTGCTACAGCCAAGTGTTGTGTTTCTGT...AGAATTGAATTCTGGAAACTCCTGACAAGTTATTACTGTCTCTGGCATTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGCTTTCCTCACTATCTTaGCAACTTTTCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQLSSLS*QLFCQS
Trigger: AGATTGACAGAAAAGTTGCAAAGATAGTGAGGAAAG...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp AATAAGGGAAGGGTATATATAGAGAACTGTAAGGGACAGGTATGTGAAAAGCAGATGTGGTCTCCTGAATaGAATCCTAGAACAATGAAA +
Preference number: 5 (lower is better)
Translates to: NKGRVYIENCKGQVCEKQMWSPE*NPRTMK
Trigger: TTTCATTGTTCTAGGATTCAATTCAGGAGACCACAT...CTGCTTTTCACATACCTGTCCCTTACAGTTCTCTATATATACCCTTCCCTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTAGCGATACATGATGTCTaGGGTTCTTTCATGTTTAAT +
Preference number: 5 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLAIHDV*GSFMFN
Trigger: ATTAAACATGAAAGAACCCAAGACATCATGTATCGC...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS-3UTR CAA 90 bp CTGAGGAGATTAACTAATATGCGATACATGATGTCTTGGGTTCTTTCATGTTTACTTTCCTCACTATCTTaGCAACTTTTCTGTCAATCT +
Preference number: 5 (lower is better)
Translates to: LRRLTNMRYMMSWVLSCLLSSLS*QLFCQS
Trigger: AGATTGACAGAAAAGTTGCAAAGATAGTGAGGAAAG...TAAACATGAAAGAACCCAAGACATCATGTATCGCATATTAGTTAATCTCCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS CCA 72 bp GGCCGGCGTGGGAGGCGCTGCGGCTGGAGGTCACGATaGGAGCCGGCGGGTGGCCGCCTGGGGAGACCCGGA +
Preference number: 6 (lower is better)
Translates to: GRRGRRCGWRSR*EPAGGRLGRPG
Trigger: TCCGGGTCTCCCCAGGCGGCCACCCGCCGGCTCCCATCGTGACCTCCAGCCGCAGCGCCTCCCACGCCGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CCA 72 bp GCGCTGCGGCTGGAGGTCACGATGGGAGCCGGCGGGTaGCCGCCTGGGGAGACCCGGACATCCAGGGGACGA +
Preference number: 6 (lower is better)
Translates to: ALRLEVTMGAGG*PPGETRTSRGR
Trigger: TCGTCCCCTGGATGTCCGGGTCTCCCCAGGCGGCCACCCGCCGGCTCCCATCGTGACCTCCAGCCGCAGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CCA 72 bp GCTGGAGGTCACGATGGGAGCCGGCGGGTGGCCGCCTaGGGAGACCCGGACATCCAGGGGACGAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: AGGHDGSRRVAA*GDPDIQGTSSG
Trigger: GCCTGAGCTCGTCCCCTGGATGTCCGGGTCTCCCCAGGCGGCCACCCGCCGGCTCCCATCGTGACCTCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS TCA 72 bp CCGTCACTGGCCGGAGCGCCGAAGCACCGGGGACGCTaGCGCACAGGTTGCCCAGTCACAAGCGCTGCTCGC +
Preference number: 6 (lower is better)
Translates to: PSLAGAPKHRGR*RTGCPVTSAAR
Trigger: GCGAGCAGCGCTTGTGACTGGGCAACCTGTGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCGGCCAGTGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS CAA 72 bp GGCACTGCCTCTTCCCTCCTGCGCGCCCGGAACCTTTaGAGTGGGCACAGCACGCAGCCCGCGCGCGGCACA +
Preference number: 6 (lower is better)
Translates to: GTASSLLRARNL*SGHSTQPARGT
Trigger: TGTGCCGCGCGCGGGCTGCGTGCTGTGCCCACTCAAAAGGTTCCGGGCGCGCAGGAGGGAAGAGGCAGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS TCA 72 bp GCACTGCCTCTTCCCTCCTGCGCGCCCGGAACCTTTTaGGTGGGCACAGCACGCAGCCCGCGCGCGGCACAA +
Preference number: 6 (lower is better)
Translates to: ALPLPSCAPGTF*VGTARSPRAAQ
Trigger: TTGTGCCGCGCGCGGGCTGCGTGCTGTGCCCACTCAAAAGGTTCCGGGCGCGCAGGAGGGAAGAGGCAGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CAA 72 bp CGGAGCGCCGAAGCACCGGGGACGCTGACGCACAGGTaGCCCAGTCACAAGCGCTGCTCGCACCCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: RSAEAPGTLTHR*PSHKRCSHPEQ
Trigger: TTGCTCTGGGTGCGAGCAGCGCTTGTGACTGGGCAACCTGTGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS CCA 72 bp TTCTCGTCTGACCTAGCTGGGTTTGGTCGCCGTCACTaGCCGGAGCGCCGAAGCACCGGGGACGCTGACGCA +
Preference number: 6 (lower is better)
Translates to: FSSDLAGFGRRH*PERRSTGDADA
Trigger: TGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCGGCCAGTGACGGCGACCAAACCCAGCTAGGTCAGACGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS TCA 72 bp AGACCCGGACATCCAGGGGACGAGCTCAGGCAGCGCTaGCACGAACTTCCTAAGCCGCGCTTCGGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: RPGHPGDELRQR*HELPKPRFGLW
Trigger: CCACAGCCCGAAGCGCGGCTTAGGAAGTTCGTGTCAGCGCTGCCTGAGCTCGTCCCCTGGATGTCCGGGTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS GCA 72 bp GCCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGCACTaGCTCTTCCCTCCTGCGCGCCCGGAACCTTTTGAG +
Preference number: 6 (lower is better)
Translates to: AASLNLSGSGGH*LFPPARPEPFE
Trigger: CTCAAAAGGTTCCGGGCGCGCAGGAGGGAAGAGGCAGTGCCCGCCACTCCCACTGAGATTGAGAGACGCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS CAA 90 bp GTCACTGGCCGGAGCGCCGAAGCACCGGGGACGCTGACGCACAGGTaGCCCAGTCACAAGCGCTGCTCGCACCCAGAGCAAGTTAAATGG +
Preference number: 6 (lower is better)
Translates to: VTGRSAEAPGTLTHR*PSHKRCSHPEQVKW
Trigger: CCATTTAACTTGCTCTGGGTGCGAGCAGCGCTTGTGACTGGGCAACCTGTGCGTCAGCGTCCCCGGTGCTTCGGCGCTCCGGCCAGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503830.2
CDS CAA 72 bp CCTAAATCCTACCCAGTTCCTCCACAGGCTGCCTCCTaGCCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PKSYPVPPQAAS*PRLSISVGVAG
Trigger: GCCCGCCACTCCCACTGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTGGAGGAACTGGGTAGGATTTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS GCA 72 bp CTAAATCCTACCCAGTTCCTCCACAGGCTGCCTCCTTaGCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: LNPTQFLHRLPP*RVSQSQWEWRA
Trigger: TGCCCGCCACTCCCACTGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTGGAGGAACTGGGTAGGATTTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000237612.8
CDS CAA 72 bp GTTTTTATCTTTCCAGTTCCTCCACAGGCTGCCTCCTaGCCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGC +
Preference number: 6 (lower is better)
Translates to: VFIFPVPPQAAS*PRLSISVGVAG
Trigger: GCCCGCCACTCCCACTGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTGGAGGAACTGGAAAGATAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS GCA 72 bp TTTTTATCTTTCCAGTTCCTCCACAGGCTGCCTCCTTaGCGCGTCTCTCAATCTCAGTGGGAGTGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: FLSFQFLHRLPP*RVSQSQWEWRA
Trigger: TGCCCGCCACTCCCACTGAGATTGAGAGACGCGGCAAGGAGGCAGCCTGTGGAGGAACTGGAAAGATAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505480.6
CDS TCA 72 bp ATCTGGAGAGTTTTTATCTTTCTCAGTTATGATGTGTaGCGCTGGAAGCAAAGCAGCCCAAATCTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: IWRVFIFLSYDV*RWKQSSPNLSA
Trigger: TGCACTGAGATTTGGGCTGCTTTGCTTCCAGCGTCACACATCATAACTGAGAAAGATAAAAACTCTCCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515655.5
CDS CCA 72 bp CTAGCTGATTATGAACCACATTTCTTTCTCGATCACTaGGATTCAAACAAAAGACCTAATGGTTCCAGTCAG +
Preference number: 6 (lower is better)
Translates to: LADYEPHFFLDH*DSNKRPNGSSQ
Trigger: CTGACTGGAACCATTAGGTCTTTTGTTTGAATCCCAGTGATCGAGAAAGAAATGTGGTTCATAATCAGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS TCA 72 bp ATGTTGCATAGTTACAAGGATTGTTTCCTGTTGCATTaGGTCCTGGGCAGAAGTTTTGTCCCAAAAATTCAT +
Preference number: 6 (lower is better)
Translates to: MLHSYKDCFLLH*VLGRSFVPKIH
Trigger: ATGAATTTTTGGGACAAAACTTCTGCCCAGGACTCAATGCAACAGGAAACAATCCTTGTAACTATGCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS CCA 72 bp ATAGTTACAAGGATTGTTTCCTGTTGCATTGAGTCCTaGGCAGAAGTTTTGTCCCAAAAATTCATTATGCTG +
Preference number: 6 (lower is better)
Translates to: IVTRIVSCCIES*AEVLSQKFIML
Trigger: CAGCATAATGAATTTTTGGGACAAAACTTCTGCCCAGGACTCAATGCAACAGGAAACAATCCTTGTAACTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000237612.8
ENST00000515655.5
ENST00000650821.1
CDS CAA 72 bp CCAAGATATTTTGGGGAATACAGCAATTCTCTTAACTaGAAGATACAGTCAAACCGGTACTGCACTCAGTTA +
Preference number: 6 (lower is better)
Translates to: PRYFGEYSNSLN*KIQSNRYCTQL
Trigger: TAACTGAGTGCAGTACCGGTTTGACTGTATCTTCAAGTTAAGAGAATTGCTGTATTCCCCAAAATATCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1
CDS TCA 72 bp CAAGATATTTTGGGGAATACAGCAATTCTCTTAACTTaGAGATACAGTCAAACCGGTACTGCACTCAGTTAT +
Preference number: 6 (lower is better)
Translates to: QDILGNTAILLT*RYSQTGTALSY
Trigger: ATAACTGAGTGCAGTACCGGTTTGACTGTATCTTCAAGTTAAGAGAATTGCTGTATTCCCCAAAATATCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650821.1