RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000119688

Ensembl transcript IDs: ENST00000356924.9, ENST00000460308.6, ENST00000465085.2, ENST00000469672.5, ENST00000470637.1, ENST00000474270.1, ENST00000475240.5, ENST00000477803.5, ENST00000481348.5, ENST00000481935.5, ENST00000484380.2, ENST00000489207.1, ENST00000489678.1, ENST00000493427.1, ENST00000493752.5, ENST00000496015.5, ENST00000553486.5, ENST00000553745.5, ENST00000553998.5, ENST00000554453.5, ENST00000555617.5, ENST00000555904.1, ENST00000556119.5, ENST00000556517.1, ENST00000556971.1, ENST00000557554.5, ENST00000557588.5

Found 906 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCC +
Preference number: 1 (lower is better)
Translates to: ANLSSIFAVSPPGLS*GPPTRHSVALLPKA
Trigger: GGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR GCA 90 bp TTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGGGTGTGTC +
Preference number: 1 (lower is better)
Translates to: FVRGGGRDGDPLKEK*CVCWLCRWPPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CCA 90 bp GATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCT +
Preference number: 1 (lower is better)
Translates to: DLCGEPELDLRCQSS*SLLRAADPPQCGSP
Trigger: AGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR CCA 90 bp CTACAAGAGACCACCACCACATGGAGATCAGGCTGCCCTGGCCGCTaGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCG +
Preference number: 1 (lower is better)
Translates to: LQETTTTWRSGCPGR*QRRPLGSLCYCYSP
Trigger: CGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAGGGCAGCCTGATCTCCATGTGGTGGTGGTCTCTTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR CCA 90 bp TTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGTGCACTACTCCTGGGCTCAAGTGAT +
Preference number: 1 (lower is better)
Translates to: LLAMLLSCRQNRSTS*LMRWSGALLLGSSD
Trigger: ATCACTTGAGCCCAGGAGTAGTGCACCGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR TCA 90 bp GCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGC +
Preference number: 1 (lower is better)
Translates to: AQDPCGSCTGSMWRT*ARSSLSVLLVSPEG
Trigger: GCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR TCA 90 bp GTCCTCTGCAGGGCACCCTCCCCCATGACTCTGGGCAGCAGCATTTaGAAACGACTGCAGATGATCTCCTTGGTGTCTGCCACCAGCAGT +
Preference number: 1 (lower is better)
Translates to: VLCRAPSPMTLGSSI*KRLQMISLVSATSS
Trigger: ACTGCTGGTGGCAGACACCAAGGAGATCATCTGCAGTCGTTTTCAAATGCTGCTGCCCAGAGTCATGGGGGAGGGTGCCCTGCAGAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR GCA 90 bp CAAGGAATGAAACTACAAGAGACCACCACCACATGGAGATCAGGCTaGCCTGGCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTAC +
Preference number: 1 (lower is better)
Translates to: QGMKLQETTTTWRSG*PGRWQRRPLGSLCY
Trigger: GTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAGGGCAGCCTGATCTCCATGTGGTGGTGGTCTCTTGTAGTTTCATTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR CCA 90 bp CAGCACTTCAAGCATATGGAGGCTCTGGCTGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAACCT +
Preference number: 1 (lower is better)
Translates to: QHFKHMEALAEAAES*ETEHWEIQCPPQKP
Trigger: AGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR GCA 90 bp GGCACTGGTCTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATaGTTTGTGCTTTCTGGGTTTTGTCTAATTTGCTGTTGTTGTTCC +
Preference number: 1 (lower is better)
Translates to: GTGLSEDFGHSNSTS*FVLSGFCLICCCCS
Trigger: GGAACAACAACAGCAAATTAGACAAAACCCAGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAGACCAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
3UTR-3UTR TCA 90 bp CCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCACTGCTAGGGGTCCTGCACCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 2 (lower is better)
Translates to: PPQKPRPGLSPPLLGVLHPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...GTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR TCA 90 bp ATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 2 (lower is better)
Translates to: MMSLLAMLLSCRQNRSTSPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp GCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 2 (lower is better)
Translates to: ARAPWTSAPSGSEGVSAAPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...GGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CCA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp GGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 2 (lower is better)
Translates to: GHAAELPAESLHVLADALHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCACGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp ACCCTGGGGGTGTGTCCAAGCCCCACTCGCTCTCGCCCAGGATCTCGCAGTCCTAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TLGVCPSPTRSRPGSRSPSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...AGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGGCTTGGACACACCCCCAGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp TCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 2 (lower is better)
Translates to: SPAAGRCDRARSPLPLSGHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 2 (lower is better)
Translates to: LAGHAAELPAESLHVLADCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp GGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 2 (lower is better)
Translates to: GEPELDLRCQSSWSLLRAAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...GGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 2 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWCWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR GCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp GTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTCGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: VPRMKYPKMLTGPSQPVLRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...AAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CCA 90 bp ACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 2 (lower is better)
Translates to: TTVPRMKYPKMLTGPSQPNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...AGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp GGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGAGGGGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 2 (lower is better)
Translates to: GRGGHSVLSATATPRFEGNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CCCCTCAAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp ACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGTCCTGGCTGATGCGCTaGTCCCGTGGAGTTCAGAAC +
Preference number: 2 (lower is better)
Translates to: TRSRRNAVSAGSAAGHPGSWLMR*SRGVQN
Trigger: GTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGA...CCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469672.5
3UTR-3UTR TCA 90 bp CGGGGAGATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: RGDDELAGHAAELPAESLGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...GAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp GCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 2 (lower is better)
Translates to: ADVQPELLGHQLPLGLKECWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...CTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAAGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 2 (lower is better)
Translates to: QDEIPEDAHRPEPACALEAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 2 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp CCGTCAGCATCTGCACTGAGCCCCGTGTACTCGTCCAGAGGCCACCCAGAACCCCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 2 (lower is better)
Translates to: PSASALSPVYSSRGHPEPQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTCAGTGCAGATGCTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR GCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 2 (lower is better)
Translates to: RHPQLLADAIELALHFLCAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: LAGHAAELPAESLHVLADRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 2 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp CCGTCAGCATCTGCACTGAGCCCCGTGTACTCGTCCAGAGGCCACCCAGAACCCTCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: PSASALSPVYSSRGHPEPSMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...GGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTCAGTGCAGATGCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp CTGGCTGATGCGCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LADALVRVIDVIPQHVEGGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp TGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 2 (lower is better)
Translates to: CRCTARAPWTSAPSGSEGAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...TCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp GCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGATGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 2 (lower is better)
Translates to: ATQNPEQGGLASARVACDDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...ATCACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR GCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CCA 90 bp GGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGACGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: GFIKHCVLRLQVEESGKGRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...TCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR TCA 90 bp CCAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: PGPLSLPPSWTGLPIPRTGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...GGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 2 (lower is better)
Translates to: PEPACALEALVSVVDEGEHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp GGTGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAACATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 2 (lower is better)
Translates to: GGFIKHCVLRLQVEESGKHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...TTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp AAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 2 (lower is better)
Translates to: KHCVLRLQVEESGKGEPLSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...CAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp CCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 2 (lower is better)
Translates to: PWTSAPSGSEGVSAACGLCTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...CAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
3UTR-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAG +
Preference number: 2 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWEAAES*ETEHWE
Trigger: CTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTC...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAAAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 2 (lower is better)
Translates to: QDEIPEDAHRPEPACALENRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp TCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: SPEAAQFCACSQPHLRASTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...CGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR CAA 90 bp TGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCAC +
Preference number: 2 (lower is better)
Translates to: CVLRLQVEESGKGEP*HLPRGQNIIPVPVH
Trigger: GTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp GTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: VLMPMYSQSSLDISSLWVGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...GACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 2 (lower is better)
Translates to: AAQFCACSQPHLRASWTGPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp GCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 2 (lower is better)
Translates to: AENGDCDDNVTQDAAQIVAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...GACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp TGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 2 (lower is better)
Translates to: CDDNVTQDAAQIVKGVDAAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...GGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp AGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 2 (lower is better)
Translates to: SLLAMLLSCRQNRSTSWLTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...CAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553745.5
3UTR-3UTR GCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR GCA 90 bp CATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 2 (lower is better)
Translates to: HVQKRLPKLPNSVRVASHQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp GGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 2 (lower is better)
Translates to: GFIKHCVLRLQVEESGKGGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...TCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp ACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCATCCCCCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: TGTFSRLCRCPTLMNVIPRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...GGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR-3UTR CCA 90 bp GGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGTGGGAGACTGAACACTaGGAGATTCAGTGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: GQRWRPAQGEMLCLLALPWETEH*EIQCPP
Trigger: TGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCA...CGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481935.5
3UTR-3UTR CCA 90 bp CGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAG +
Preference number: 2 (lower is better)
Translates to: RRGQVDELGEAADEVDAHEAAES*ETEHWE
Trigger: CTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTC...GTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
3UTR-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGAGCATATGGAGGCTCTaGCTGAGGCAGCAGAGTCCT +
Preference number: 2 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWSIWRL*LRQQSP
Trigger: AGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCT...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR CAA 90 bp GTGATGAGCAGGCTCTGTCCCTCGGAGATCTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGC +
Preference number: 2 (lower is better)
Translates to: VMSRLCPSEIFRLRS*IRGLSEEGAEMETR
Trigger: GCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCTGCTCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp AGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 2 (lower is better)
Translates to: RPANSKNLKILSSSAEPEHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 2 (lower is better)
Translates to: QVDELGEAADEVDAHKGICWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTGAAAACGACTGCAGATaGTCTCCTTGGTGTCTGCCA +
Preference number: 2 (lower is better)
Translates to: GPQDEIPEDAHRPEPACAENDCR*SPWCLP
Trigger: TGGCAGACACCAAGGAGATCATCTGCAGTCGTTTTC...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR-3UTR TCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAATTCAGAACCAAGGAATaGAACTTCTCAAGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKFRTKE*NFSRLC
Trigger: GCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAA...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
3UTR-3UTR GCA 90 bp GATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCAGCAGGCTGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 2 (lower is better)
Translates to: DAAQIVKGVDADCRKQQAAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...AGCCTGCTGCTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
3UTR-3UTR GCA 90 bp GCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGATCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: ATQNPEQGGLASARVACDRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...ATCACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR GCA 90 bp CATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGAACTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 2 (lower is better)
Translates to: HPQLLADAIELALHFLCQNFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTT...CTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553486.5
3UTR-3UTR CCA 90 bp GCAGCAGAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAACGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: AAESWETEHWEIQCPPQKRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...TTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp GTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGTCCTGGCTGATGCGCTaGTCCCGTGGAGTTCAGAAC +
Preference number: 2 (lower is better)
Translates to: VLFTTVPRMKYPKMLTGPSWLMR*SRGVQN
Trigger: GTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGA...CGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
3UTR-3UTR CCA 90 bp GTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCTGCATAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: VLMPTVESSRLRIHPNLHNRSTS*LMRWSR
Trigger: ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...ATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGTCGGCATCAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000555617.5
3UTR-3UTR GCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 2 (lower is better)
Translates to: RHPQLLADAIELALHFLCQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp GAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGACGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: ESWETEHWEIQCPPQKPRRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...TCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp ACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGT +
Preference number: 2 (lower is better)
Translates to: TQDAAQIVKGVDADVQPENRSTS*LMRWSR
Trigger: ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556119.5
3UTR-3UTR CCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGGAGGTTCAGCCAGGTTaGGGGGCCGCCTGTAGAAAG +
Preference number: 2 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMEVQPG*GAACRK
Trigger: CTTTCTACAGGCGGCCCCCCAACCTGGCTGAACCTC...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554453.5
3UTR-3UTR TCA 90 bp AACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGATGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 2 (lower is better)
Translates to: NVTQDAAQIVKGVDADCRCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...TCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
3UTR-3UTR TCA 90 bp GGATCTCGCAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCGTG +
Preference number: 2 (lower is better)
Translates to: GSRSPVTSGTCPEASPEARLQVN*SKLFSV
Trigger: CACGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...AGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553745.5
3UTR-3UTR GCA 90 bp GATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGCTCATGTGCTCCACATaGCCAGCTCTGACAAGGAAA +
Preference number: 2 (lower is better)
Translates to: DADVQPELLGHQLPLGLKLMCST*PALTRK
Trigger: TTTCCTTGTCAGAGCTGGGCATGTGGAGCACATGAG...CTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554453.5
3UTR-3UTR GCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGGCATTCACCCGAATCTaGATGTGCTTGAACCTTTGG +
Preference number: 2 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGAFTRI*MCLNLW
Trigger: CCAAAGGTTCAAGCACATGCAGATTCGGGTGAATGC...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000555617.5
3UTR-3UTR CCA 90 bp GTAGGTAATCAGCACTTCAAGCATATGGAGGCTCTGGCTGAGGCAGCAGAGTCCTGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 2 (lower is better)
Translates to: VGNQHFKHMEALAEAAESCTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...GGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTGATTACCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp ACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: TGLPIPRTSRSSHHRQNLTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...CAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CAA 90 bp CTCTGTCCCTCGGAGATCTTTAGGCTCAGATCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTCAAGGAGAAAT +
Preference number: 2 (lower is better)
Translates to: LCPSEIFRLRSLIRG*SEEGAEMETRSRRN
Trigger: ATTTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp TTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 2 (lower is better)
Translates to: LEALVSVVDEGERGDDELGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...AAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp CGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 2 (lower is better)
Translates to: RRGQVDELGEAADEVDAHDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...GTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp GACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: DFRDMSRSVSRSCPILCVRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 2 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 2 (lower is better)
Translates to: QVDELGEAADEVDAHKGIQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
3UTR-3UTR CCA 90 bp CAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 2 (lower is better)
Translates to: QVGQACQFQEPQDPLIIGDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...GCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR TCA 90 bp TGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 2 (lower is better)
Translates to: CALEALVSVVDEGERGDDPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...ATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp TTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTCAAGGAGAAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 2 (lower is better)
Translates to: LIRGLSEEGAEMETRSRRKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...TCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp ACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: TSESVVDRSMSWVKQLMRPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 2 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR GCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: FIKHCVLRLQVEESGKGERNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp TTCCAGAACAGCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: FQNSRVCFPSHQAVKYKSRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...AGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGCTGTTCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
3UTR-3UTR CCA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGGATGTCCACAGGGCTaGAGAGGTTCAGCCAGGTTG +
Preference number: 2 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDGCPQG*RGSARL
Trigger: CAACCTGGCTGAACCTCTCCAGCCCTGTGGACATCC...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554453.5
3UTR-3UTR TCA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 2 (lower is better)
Translates to: QVDELGEAADEVDAHKGIKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp GGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 2 (lower is better)
Translates to: GQVDELGEAADEVDAHKGAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...GCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
3UTR-3UTR TCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGTTCAGAACCAAGGAATaGAACTTCTCAAGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMFRTKE*NFSRLC
Trigger: GCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAA...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553486.5
3UTR-3UTR GCA 90 bp AGGCTCTGTCCCTCGGAGATCTTTAGGCTCAGATCCTTGATTAGGGGTTTGTCACGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 2 (lower is better)
Translates to: RLCPSEIFRLRSLIRGLSRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...TGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CCA 90 bp TGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CALEALVSVVDEGERGDDPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...ATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR GCA 90 bp AACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 2 (lower is better)
Translates to: NVTQDAAQIVKGVDADVQAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...CTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
3UTR-3UTR CCA 90 bp AACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGACCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 2 (lower is better)
Translates to: NVTQDAAQIVKGVDADCRPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...TCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460308.6
ENST00000469672.5
3UTR-3UTR TCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGTCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLSMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGTGGGAGACTGAACACTaGGAGATTCAGTGTCCCCCA +
Preference number: 2 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLWETEH*EIQCPP
Trigger: TGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCA...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR CCA 72 bp ATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGTGCACTACTCCTGGGC +
Preference number: 3 (lower is better)
Translates to: MLLSCRQNRSTS*LMRWSGALLLG
Trigger: GCCCAGGAGTAGTGCACCGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR TCA 72 bp AGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SSIFAVSPPGLS*GPPTRHSVALL
Trigger: AAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
3UTR GCA 72 bp GGGGAGATGATGAGCTTGCTGGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACGTCCTGGCTGATGCGC +
Preference number: 3 (lower is better)
Translates to: GEMMSLLAMLLS*RQNRSTSWLMR
Trigger: GCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
3UTR CCA 72 bp ACCACCACCACATGGAGATCAGGCTGCCCTGGCCGCTaGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGC +
Preference number: 3 (lower is better)
Translates to: TTTTWRSGCPGR*QRRPLGSLCYC
Trigger: GCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAGGGCAGCCTGATCTCCATGTGGTGGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR-3UTR CAA 90 bp CCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 3 (lower is better)
Translates to: PPGTEHHTSSSPPAGPGPPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...AGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: LAGHAAELPAESLHVLADGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: HAAELPAESLHVLADALVGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...GACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR TCA 72 bp GCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGC +
Preference number: 3 (lower is better)
Translates to: AGPGYRCHPAAR*GCSTHGPGSRG
Trigger: GCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR TCA 72 bp GCGCCTACGGGTTATCGATGTCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGC +
Preference number: 3 (lower is better)
Translates to: APTGYRCHPAAR*GCSTHGPGSRG
Trigger: GCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAACCCGTAGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR CCA 72 bp GATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCCTGGGGGTGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: DGDPLKEKCCVC*LCRWPPWGCVQ
Trigger: TTGGACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: LAGHAAELPAESLHVLADGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 3 (lower is better)
Translates to: DERHPQLLADAIELALHFPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR TCA 72 bp CACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCACATACAGCAGGTTGC +
Preference number: 3 (lower is better)
Translates to: HGPGSRGGEGAQ*GPSSSSHTAGC
Trigger: GCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CCA 72 bp ATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGGTTATCGATGTCATCC +
Preference number: 3 (lower is better)
Translates to: MLLSCRQNRSTS*LMRWSGLSMSS
Trigger: GGATGACATCGATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp CATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: HAAELPAESLHVLADALVEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...GACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: QVEESGKGEPLHLPRGQNGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...GTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR GCA 72 bp CCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTG +
Preference number: 3 (lower is better)
Translates to: PGDRTSYQFQST*WSRPSVLATKL
Trigger: CAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CCA 72 bp ATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGTGGAGTTCAGAACAAT +
Preference number: 3 (lower is better)
Translates to: MLLSCRQNRSTS*LMRWSRGVQNN
Trigger: ATTGTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: AAQFCACSQPHLRASWTGGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: ADVQPELLGHQLPLGLKEGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...CTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: HVQKRLPKLPNSVRVASHGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...GTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 3 (lower is better)
Translates to: DERHPQLLADAIELALHFVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTCTGCAGATGATCTCCTaGGTGTCTGCCACCAGCAGT +
Preference number: 3 (lower is better)
Translates to: GPQDEIPEDAHRPEPACALQMIS*VSATSS
Trigger: ACTGCTGGTGGCAGACACCAAGGAGATCATCTGCAG...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR TCA 72 bp CCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: PCGSCTGSMWRT*ARSSLSVLLVS
Trigger: AGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR GCA 72 bp GCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTaGCGATGTCCCACACTGATGAACGTCATCCCCAGC +
Preference number: 3 (lower is better)
Translates to: AILVSTGTFSRL*RCPTLMNVIPS
Trigger: GCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
3UTR CCA 72 bp GGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTTGCCACCAAGTTGGAC +
Preference number: 3 (lower is better)
Translates to: GDRTSYQFQSTC*SRPSVLATKLD
Trigger: GTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGATCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: ATQNPEQGGLASARVACDRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...ATCACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CAA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR TCA 72 bp GGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATaGAATACCCGAAGATGCTCACAGGCCCGAGCCAGC +
Preference number: 3 (lower is better)
Translates to: GPSKFCSPRSPG*NTRRCSQARAS
Trigger: GCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR TCA 72 bp AAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAA +
Preference number: 3 (lower is better)
Translates to: KLPNSVRVASHI*ERRGQVDELGE
Trigger: TTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR TCA 72 bp AGGGCACCCTCCCCCATGACTCTGGGCAGCAGCATTTaGAAACGACTGCAGATGATCTCCTTGGTGTCTGCC +
Preference number: 3 (lower is better)
Translates to: RAPSPMTLGSSI*KRLQMISLVSA
Trigger: GGCAGACACCAAGGAGATCATCTGCAGTCGTTTTCAAATGCTGCTGCCCAGAGTCATGGGGGAGGGTGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR CCA 72 bp CTGGCTGAGGCAGCAGAGTCCTGGGAGACTGAACACTaGGAGATTCAGTGTCCCCCACAGAAACCTAGACCT +
Preference number: 3 (lower is better)
Translates to: LAEAAESWETEH*EIQCPPQKPRP
Trigger: AGGTCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR CCA 72 bp AAGCATATGGAGGCTCTGGCTGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAGATTCAGTGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: KHMEALAEAAES*ETEHWEIQCPP
Trigger: TGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR CCA 72 bp GTGAAGAATGGCTTTTGTGGCAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGCATCTGCACTGAGCCC +
Preference number: 3 (lower is better)
Translates to: VKNGFCGRNSTP*GPKSVSICTEP
Trigger: GGGCTCAGTGCAGATGCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCTGCCACAAAAGCCATTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CCA 72 bp GATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTGCGTACTTCGGCTGCA +
Preference number: 3 (lower is better)
Translates to: DRARSPLPLSGH*WLHQALRTSAA
Trigger: TGCAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSVVDEGERGDDELAGHAGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 3 (lower is better)
Translates to: HCVLRLQVEESGKGEPLHHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...ATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGCGAATCTGCATGTGCTaGAACCTTTGGAAGCACTGG +
Preference number: 3 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGRICMC*NLWKHW
Trigger: CCAGTGCTTCCAAAGGTTCAAGCACATGCAGATTCG...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555617.5
3UTR TCA 72 bp GGCTCTGTCCCTCGGAGATCTTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGG +
Preference number: 3 (lower is better)
Translates to: GSVPRRSLGSDP*LGVCQRRGQRW
Trigger: CCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR-3UTR CAA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCAAGATTTCCAGATCTCTaGACTCCAAGAGTCATTTCT +
Preference number: 3 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPRFPDL*TPRVIS
Trigger: AGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCT...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
3UTR-3UTR CAA 90 bp CCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: PIKVLFTTVPRMKYPKMLGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...GAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp GGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 3 (lower is better)
Translates to: GQVDELGEAADEVDAHKGHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...GCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 3 (lower is better)
Translates to: QSCDFRDMSRSVSRSCPIHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...AATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
3UTR TCA 72 bp CCAGAAGGAAAGGACCACACAGAGTGTAGAAAGGACTaGGTTGGGGCGCCTACGGGTTATCGATGTCATCCC +
Preference number: 3 (lower is better)
Translates to: PEGKDHTECRKD*VGAPTGYRCHP
Trigger: GGGATGACATCGATAACCCGTAGGCGCCCCAACTCAGTCCTTTCTACACTCTGTGTGGTCCTTTCCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR CCA 72 bp CCTCCAGCTTCTCCTGATGCACCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGTTCACCACGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: PPASPDAPASSQ*GPSKFCSPRSP
Trigger: TGGGGACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGAAGCTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
3UTR-3UTR CAA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGCATGTGCTTGAACCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 3 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGHVLEP*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGGTTCAAGCACATG...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555617.5
3UTR GCA 72 bp CATTTGAAAACGACTGCAGATGATCTCCTTGGTGTCTaGCACCAGCAGTCTCCAGGGCTAGGCCAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: HLKTTADDLLGV*HQQSPGLGQKE
Trigger: TTCCTTCTGGCCTAGCCCTGGAGACTGCTGGTGGCAGACACCAAGGAGATCATCTGCAGTCGTTTTCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
3UTR-3UTR CAA 90 bp GGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGAGATTTCCAGATCTCTaGACTCCAAGAGTCATTTCT +
Preference number: 3 (lower is better)
Translates to: GQRWRPAQGEMLCLLALPRFPDL*TPRVIS
Trigger: AGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCT...CGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
3UTR-3UTR CAA 90 bp CTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: LSLPPSWTGLPIPRTSRSRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...GGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
3UTR-3UTR CAA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: VSVVDEGERGDDELAGHARICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
3UTR TCA 72 bp GGTCCTTCCTCCAGCTCACATACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCAGCGTGGAGTTCAGAA +
Preference number: 3 (lower is better)
Translates to: GPSSSSHTAGCR*TDQSSSAWSSE
Trigger: TTCTGAACTCCACGCTGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553745.5
3UTR TCA 72 bp GGCTCTCCTTCCAAAAGCCAGAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATCTTCCTCCTCCACAGA +
Preference number: 3 (lower is better)
Translates to: GSPSKSQSFIPL*FSSAPIFLLHR
Trigger: TCTGTGGAGGAGGAAGATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTCTGGCTTTTGGAAGGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
ENST00000556517.1
3UTR TCA 72 bp CATCTTCCTCCTCCACAGAGTTTCAGAACCAAGGAATaGAACTACAAGAGACCACCACCACATGGAGATCAG +
Preference number: 3 (lower is better)
Translates to: HLPPPQSFRTKE*NYKRPPPHGDQ
Trigger: CTGATCTCCATGTGGTGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR GCA 72 bp CTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATaGTTTGTGCTTTCTGGGTTTTGTCTAATTTGCTGT +
Preference number: 3 (lower is better)
Translates to: LSEDFGHSNSTS*FVLSGFCLICC
Trigger: ACAGCAAATTAGACAAAACCCAGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR TCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAACCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LSVLLVSPEGRRPATVWLCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...GAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ELDLRCQSSWSLLRAADPCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...CGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CCGTCAGCATCTGCACTGAGCCCCGTGTACTCGTCCAGAGGCCACCCAGAACCCTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PSASALSPVYSSRGHPEPCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...GGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTCAGTGCAGATGCTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCATGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPCWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp TCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCGCCCCGCGACCGCCATaGCCTGAGACCCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: SCTGPMWLLHGIYVANLSAPRPP*PETRGT
Trigger: AGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGC...GCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp ACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGGCCCCGCGACCGCCATaGCCTGAGACCCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: TVPRMKYPKMLTGPSQPVAPRPP*PETRGT
Trigger: AGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGC...CACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: ELDLRCQSSWSLLRAADPCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...CGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp ACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCACCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TSAPSGSEGVSAACGLSSPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp TCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSWSLLRAADPPQCGSPSGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...GGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSVLLVSPEGRRPATVWLPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...GAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp TGCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCGATCTAACCTGGGCCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: CWSRPSVLATKLDRPANSDLTWA*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATC...GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCGATCTAACCTGGGCCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: DDELAGHAAELPAESLHVDLTWA*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATC...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: PRGQNIIPVPVHLLVQALCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...GAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp TCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: SPAAGRCDRARSPLPLSGCWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...CCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LAMLLSCRQNRSTSWLMRRPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...GCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000553745.5
ENST00000555617.5
CDS-3UTR TCA 90 bp CTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: LVSPEGRRPATVWLSFQKHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: AGHAAELPAESLHVLADAVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...CGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CTCGTCCAGAGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LVQRPPRTRSKEVLPVPVVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...CACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: IKHCVLRLQVEESGKGEPPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...CGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp AGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCCTCCTGGTCTCTCCTaGGGGCCGCCGACCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RTHVAPARDLCGEPELDLPPGLS*GPPTRH
Trigger: GTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGG...AAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR TCA 90 bp CAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: QHVEGVVRTAPEVEAVKVATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...CACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGATGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: ATQNPEQGGLASARVACDATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...ATCACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGTGCAC +
Preference number: 4 (lower is better)
Translates to: DDELAGHAAELPAESLHVAPRPG*CAGPVH
Trigger: GTGCACCGGACCAGCGCATCAGCCAGGACGTGGAGC...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR GCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGTCTCCAGGAGTCCTCTaGAGGGCACCCTCCCCCATG +
Preference number: 4 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVSPGVL*RAPSPM
Trigger: CATGGGGGAGGGTGCCCTGCAGAGGACTCCTGGAGA...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CCA 90 bp AGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RPPRTRSKEVLPVPVLPVNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCAGCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PATSESVVDRSMSWVKQLCWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...CAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGACGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp GGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTCGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GVLHRTHVAPARDLCGEPRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...AGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR TCA 90 bp CATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HAAELPAESLHVLADALVSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...GACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCCTGGGGGTGTGTCCAAGCCCCACTCGCTCTCGCCCAGGATCTCGCAGTCCTGGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: PWGCVQAPLALAQDLAVLDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...CAGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGGCTTGGACACACCCCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: DDELAGHAAELPAESLHVATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
CDS-3UTR TCA 90 bp GCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: AGPGPLSLPPSWTGLPIPATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...TGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGGAGTGTAGAAAGGACTaGGTTGGGGCGCCTACGGGT +
Preference number: 4 (lower is better)
Translates to: AMLLSCRQNRSTSWLMRWECRKD*VGAPTG
Trigger: ACCCGTAGGCGCCCCAACTCAGTCCTTTCTACACTC...CCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR TCA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: AAQFCACSQPHLRASWTGAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPRSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: LVSPEGRRPATVWLSFQKQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...CTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
ENST00000556517.1
CDS-3UTR GCA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp TCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSWSLLRAADPPQCGSPSDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...GGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSICWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp GGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: GTEHHTSSSPPAGPGPLSCWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...GGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTTGCTGGCTCTGCCGCTaGCCACCCTGGGGGTGTGTC +
Preference number: 4 (lower is better)
Translates to: AVASPPGTEHHTSSSPPACWLCR*PPWGCV
Trigger: GACACACCCCCAGGGTGGCCAGCGGCAGAGCCAGCA...AGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCACTGCTAGGGGTCCTGCACAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: PPQKPRPGLSPPLLGVLHKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...GTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp CTCGTCCAGAGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LVQRPPRTRSKEVLPVPVRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...CACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 4 (lower is better)
Translates to: LSVLLVSPEGRRPATVWLCTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...GAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp AACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGACCTGGGCTCAGCCCACGGCTGCCCTGGCCGCTaGCAGAGGAGGCCACTCGGT +
Preference number: 4 (lower is better)
Translates to: NTGRFSVPHRNLDLGSAHGCPGR*QRRPLG
Trigger: ACCGAGTGGCCTCCTCTGCCAGCGGCCAGGGCAGCC...GTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp CCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCGAGACCACCACCACATaGAGATCAGGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PQLLADAIELALHFLCQGETTTT*RSGCPG
Trigger: GCCAGGGCAGCCTGATCTCCATGTGGTGGTGGTCTC...GCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp CTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTCCTGGCTGATGCGCTaGTCCCGTGGAGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LAMLLSCRQNRSTSWLMRSWLMR*SRGVQN
Trigger: GTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGA...GCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCGCTGGTGCTCCCAGGTaGGCTCGGGTCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFAGAPR*ARVLRV
Trigger: GACCCTCAGGACCCGAGCCCACCTGGGAGCACCAGC...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS-3UTR CCA 90 bp TCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCTCCTTGCCACCAAGTTaGACTGTAGCTGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSWSLLRAADPPQCGSPSSLPPS*TVAGAP
Trigger: GGGAGCACCAGCTACAGTCCAACTTGGTGGCAAGGA...GGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS-3UTR TCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAAGCCCCGCGACCGCCATaGCCTGAGACCCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: PEPACALEALVSVVDEGEAPRPP*PETRGT
Trigger: AGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGC...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGEAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp GAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: EMETRSRRNAVSAGSAAGCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...GCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: RHPQLLADAIELALHFLCCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGGCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: PAQGEMLCLLALPLATLGPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...CCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ACCCTGGGGGTGTGTCCAAGCCCCACTCGCTCTCGCCCAGGATCTCGCAGTCCTGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLGVCPSPTRSRPGSRSPDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...AGGACTGCGAGATCCTGGGCGAGAGCGAGTGGGGCTTGGACACACCCCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTEHHTSSSPPAGPGPLSATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...GGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: DFRDMSRSVSRSCPILCVAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...CACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: QVEESGKGEPLHLPRGQNAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...GTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: ARAPWTSAPSGSEGVSAAAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...GGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGGCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: PAQGEMLCLLALPLATLGQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...CCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: LQVEESGKGEPLHLPRGQGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: GEPELDLRCQSSWSLLRAGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...GGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCGGGTTAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: AELPAESLHVLADALVRVKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...AACCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSVLLVSPEGRRPATVWLGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...GAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRGQNIIPVPVHLLVQALPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...GAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCAGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp GATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: DVIPQHVEGVVRTAPEVENRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GHAAELPAESLHVLADALDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...CAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCCGTGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: LLSCRQNRSTSWLMRWSRDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: DFRDMSRSVSRSCPILCVCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...CACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: LLGVLHRTHVAPARDLCGKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...GCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGCGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp TCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAGCACTTCAAGCATATaGAGGCTCTGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSWSLLRAADPPQCGSPSSTSSI*RLWLRQ
Trigger: CTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCT...GGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp CCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAAGGCTGCCCTGGCCGCTaGCAGAGGAGGCCACTCGGT +
Preference number: 4 (lower is better)
Translates to: PCEHGYLLKALPMSHTDEGCPGR*QRRPLG
Trigger: ACCGAGTGGCCTCCTCTGCCAGCGGCCAGGGCAGCC...TTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR CCA 90 bp TGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCCGTGGAGTTCAGCCCCTAGTTCAGTACTaGGTAGAGTCCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CRQNRSTSWLMRWSRGVQPLVQY*VESEEG
Trigger: CCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGG...CTGAACTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469672.5
CDS-3UTR CCA 90 bp CAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCACTGATCACAAATTGCTCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QLLADAIELALHFLCQGTDHKLL*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGAGCAATTTGTGATC...AGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS-3UTR CCA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: LAGHAAELPAESLHVLADNRSTS*LMRWSR
Trigger: ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCAAAGTTGGACTGTAGCTaGTGCTCCCAGGTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPKLDCS*CSQVGS
Trigger: CGAGCCCACCTGGGAGCACCAGCTACAGTCCAACTT...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS-3UTR TCA 90 bp CCACCACTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTAGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PPLLGVLHRTHVAPARDLGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...TAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp TCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: SPEAAQFCACSQPHLRASAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...CGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ARAPWTSAPSGSEGVSAASSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...GGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: PWTSAPSGSEGVSAACGLVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...CAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp AGGATCTCGCAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: RISQSCDFRDMSRSVSRSATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...GCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp AGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: RAPWTSAPSGSEGVSAACAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...GCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCCGTGGAGTTCAGCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: CRQNRSTSWLMRWSRGVQQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...CTGAACTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCACAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp TCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SCTGPMWLLHGIYVANLSQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...GCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp TTCTCCTCCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGACATGGAGATCAGGCTaGCCTGGCCGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FSSSGHPCEHGYLLKALPTWRSG*PGRWQR
Trigger: CCTCTGCCAGCGGCCAGGGCAGCCTGATCTCCATGT...CGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR GCA 90 bp GGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGAGGGGTTGGACTGTAGCTGGTaGTCCCAGGTGGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: GRGGHSVLSATATPRFEGLDCSW*SQVGSG
Trigger: ACCCGAGCCCACCTGGGAGCACCAGCTACAGTCCAA...CCCCTCAAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556517.1
CDS-3UTR GCA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGCGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVRSVLM*STCPAL
Trigger: TAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS-3UTR CCA 90 bp ATGCCACTGCACCTGGCAGGCTTCTTCTTTTTAGCTGCCTATTCACAGCCCTGCGATCTAACCTGGGCCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: MPLHLAGFFFLAAYSQPCDLTWA*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATC...GCAGGGCTGTGAATAGGCAGCTAAAAAGAAGAAGCCTGCCAGGTGCAGTGGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RHPQLLADAIELALHFLCIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp CAGAGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: QRPPRTRSKEVLPVPVLPDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GPQDEIPEDAHRPEPACAKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp TCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: SPAAGRCDRARSPLPLSGFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...CCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GVLHRTHVAPARDLCGEPRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...AGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp CTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGVLHRTHVAPARDLCGEAAES*ETEHWE
Trigger: CTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTC...GCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp ACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGAGCATATGGAGGCTCTaGCTGAGGCAGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TRSRRNAVSAGSAAGHPGSIWRL*LRQQSP
Trigger: AGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCT...CCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp CTCGTCCAGAGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGAGCACTTCAAGCATATaGAGGCTCTGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVQRPPRTRSKEVLPVPVSTSSI*RLWLRQ
Trigger: CTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCT...CACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMRPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGGATCACAAATTGCTCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGDHKLL*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGAGCAATTTGTGATC...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGCTGGTGCTCCCAGGTaGGCTCGGGTCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSTGTFSRLCRCPTLMNAGAPR*ARVLRV
Trigger: GACCCTCAGGACCCGAGCCCACCTGGGAGCACCAGC...GTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556517.1
CDS-3UTR TCA 90 bp CCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGTCGGGGTGCCCCGCGACCGCCATaGCCTGAGACCCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: PIPRTSRSSHHRQNLSRGAPRPP*PETRGT
Trigger: AGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGC...ACCCCGACTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: AAGRGGHSVLSATATPRFGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...AAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: GQNIIPVPVHLLVQALCPAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...AGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: RRGQVDELGEAADEVDAHCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...GTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: LRLQVEESGKGEPLHLPRPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...CCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AAQFCACSQPHLRASWTGSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AVASPPGTEHHTSSSPPASSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...AGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp TCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: SPEAAQFCACSQPHLRASVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...CGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LRLQVEESGKGEPLHLPRDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...CCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: VIPQHVEGVVRTAPEVEAEGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...CGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAATCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKSMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCTCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HAAELPAESLHVLADALVSMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...GACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCACTGCTAGGGGTCCTGCACAGAGTCCTGGGAGACTaGACACTGGGAGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: PPQKPRPGLSPPLLGVLHRVLGD*TLGDSV
Trigger: CACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCT...GTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCGGAGGGGCACTGGTCTaGGTGAGGACTTTGGGCACA +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRGGALV*VRTLGT
Trigger: TGTGCCCAAAGTCCTCACTCAGACCAGTGCCCCTCC...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR TCA 90 bp GCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGGAAAACGACTGCAGATaGTCTCCTTGGTGTCTGCCA +
Preference number: 4 (lower is better)
Translates to: AMLLSCRQNRSTSWLMRWENDCR*SPWCLP
Trigger: TGGCAGACACCAAGGAGATCATCTGCAGTCGTTTTC...CCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR TCA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTGCTCCACGTCCTGGCTaGTGCGCTGGTCCCGTGGAG +
Preference number: 4 (lower is better)
Translates to: VSVVDEGERGDDELAGHAAPRPG*CAGPVE
Trigger: CTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGC...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: DFRDMSRSVSRSCPILCVAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...CACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GEPELDLRCQSSWSLLRAPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...GGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp ACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCAGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: TSAPSGSEGVSAACGLSSGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR GCA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR GCA 90 bp CACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: HRTHVAPARDLCGEPELDAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...ATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSIAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: QPELLGHQLPLGLKESLQAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...CTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp AGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SRAKESRCISPGDRTSYQPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...CTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: APARDLCGEPELDLRCQSPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...GGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR GCA 90 bp GTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VLHRTHVAPARDLCGEPEDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...CTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATACAGGTGCATGCCACTaGACCTGGCAGGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LAGHAAELPAESLHVLADTGACH*TWQASS
Trigger: AGAAGAAGCCTGCCAGGTGCAGTGGCATGCACCTGT...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR GCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTTGGACTGTAGCTGGTaGTCCCAGGTGGGCTCGGGT +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRLDCSW*SQVGSG
Trigger: ACCCGAGCCCACCTGGGAGCACCAGCTACAGTCCAA...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS-3UTR GCA 90 bp CCACCACTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTACCCTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: PPLLGVLHRTHVAPARDLPFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGG...TAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555904.1
CDS-3UTR CCA 90 bp GGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: GDRTSYQFQSTCWSRPSVKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GQRWRPAQGEMLCLLALPRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...CGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGAGGGGAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: GRGGHSVLSATATPRFEGRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...CCCCTCAAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CCA 90 bp CCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: PQAILVSTGTFSRLCRCPRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...GGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CCA 90 bp GATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: DVIPQHVEGVVRTAPEVEFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...CTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: PPGTEHHTSSSPPAGPGPLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...AGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCACCACTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTACCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PPLLGVLHRTHVAPARDLPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...TAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp CATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: HPQLLADAIELALHFLCQRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...CTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCGCTGTCAGTCCTCCTaGTCTCTCCTGAGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QSCDFRDMSRSVSRSCPIRCQSS*SLLRAA
Trigger: GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCG...AATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSRPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000553745.5
CDS-3UTR CCA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTCCGGTGCACTACTCCTaGGCTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GPQDEIPEDAHRPEPACAPVHYS*AQVILL
Trigger: CAGGAGGATCACTTGAGCCCAGGAGTAGTGCACCGG...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR TCA 90 bp TTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCCCCGCGACCGCCATaGCCTGAGACCCGAGGGACT +
Preference number: 4 (lower is better)
Translates to: LEALVSVVDEGERGDDELAPRPP*PETRGT
Trigger: AGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGC...AAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
CDS-3UTR TCA 90 bp CCGTCAGCATCTGCACTGAGCCCCGTGTACTCGTCCAGAGGCCACCCAGAACCCAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PSASALSPVYSSRGHPEPRLQVN*SKLFSV
Trigger: CACGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...GGGTTCTGGGTGGCCTCTGGACGAGTACACGGGGCTCAGTGCAGATGCTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS-3UTR TCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCATGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: HQLPLGLKESLQPAVCPHGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...ATGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: DVQPELLGHQLPLGLKESHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...AGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TSESVVDRSMSWVKQLMRSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR TCA 90 bp TGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAAGCTCCCTCTGGGTCTaGAGGAGTCTCTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CRCTARAPWTSAPSGSEGSSLWV*RSLCSL
Trigger: CAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCT...TCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GACCAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: DQGAKLCGTQVSIDPAENVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...ATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: RHPQLLADAIELALHFLCDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWREGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: RHPQLLADAIELALHFLCIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: HPQLLADAIELALHFLCQIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...CTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGATCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRSMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR TCA 90 bp CGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCCTTCCTCCACTGGGCAGCAGCATTTaGAAACGACTGCAGATGATC +
Preference number: 4 (lower is better)
Translates to: RTAPEVEAVKVLSEVLPPLGSSI*KRLQMI
Trigger: GATCATCTGCAGTCGTTTTCAAATGCTGCTGCCCAG...TGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR GCA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCCGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRRSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR GCA 90 bp CATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACCGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: HVQKRLPKLPNSVRVASHRSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...GTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGCGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGRSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553998.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCGGGTTCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: AELPAESLHVLADALVRVRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...AACCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATAGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: EESGKGEPLHLPRGQNIIGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...TATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSTGTFSRLCRCPTLMNVGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...GACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp GGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GQRWRPAQGEMLCLLALPRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...CGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp AGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: RTHVAPARDLCGEPELDLQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...AAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp CAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QALCPCHQVGQACQFQEPQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...AGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp AACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: NTGRFSVPHRNLDLGSAHQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...GTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR GCA 90 bp CACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCTGGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: HFLCQGTGGFIKHCVLRLAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...CAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: EPELDLRCQSSWSLLRAAGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GAGGCGGTGAAGGTGCTCAGTGAGGTCCTTCCTCCAGCTCACATACAGCAGGTTCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: EAVKVLSEVLPPAHIQQVPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...AACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp AGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RTHVAPARDLCGEPELDLPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...AAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp CACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: HRTHVAPARDLCGEPELDDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...ATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp GGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTCAGAACAGCAGAGTGTaGTTCCCTTCCCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: GVLHRTHVAPARDLCGEPQNSRV*FPSHQA
Trigger: AGCTTGGTGGGAAGGGAAGCACACTCTGCTGTTCTG...AGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp ATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCCACTCGGTTCTCTCTaGTACTGCTACTCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: MSLLAMLLSCRQNRSTSWPLGSL*YCYSPF
Trigger: AAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGG...CCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCCGTGGAGCATTCACCCGAATCTaGATGTGCTTGAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSCRQNRSTSWLMRWSRGAFTRI*MCLNLW
Trigger: CCAAAGGTTCAAGCACATGCAGATTCGGGTGAATGC...TCCACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555617.5
CDS-3UTR CCA 90 bp CTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGCATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: LRSLIRGLSEEGAEMETRIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...GCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATCCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: LAGHAAELPAESLHVLADPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GTGCTCAGTGAGGTCCTTCCTCCAGCTCACATACAGCAGGTTGCAGGTGAACTGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: VLSEVLPPAHIQQVAGELNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GPQDEIPEDAHRPEPACADRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCTGAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: HFLCQGTGGFIKHCVLRLKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...CAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCC +
Preference number: 4 (lower is better)
Translates to: DFRDMSRSVSRSCPILCVKCCVC*LCRWPP
Trigger: GGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTT...CACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GTCTGTCCTCATGTGCTCCACATGCCCAGCTCTGTAGAAAGCAGCAGGCTCCGCAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: VCPHVLHMPSSVESSRLRRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...GCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACATGAGGACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: VLHRTHVAPARDLCGEPELSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...CTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp GCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: AAGRGGHSVLSATATPRFLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...AAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGEPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp GCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTCCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: AAGRGGHSVLSATATPRFPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...AAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVASPPGTEHHTSSSPPARPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...AGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCGACCCGCCACAGTGTaGCTCTCCTTCCAAAAGCCA +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFRPATV*LSFQKP
Trigger: TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCG...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
ENST00000556517.1
CDS-3UTR CCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAATGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGECTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAAAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: QDEIPEDAHRPEPACALERPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000553745.5
CDS-3UTR CCA 90 bp GTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTCCCCTAGTTCAGTACTaGGTAGAGTCCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VPRMKYPKMLTGPSQPVLPLVQY*VESEEG
Trigger: CCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGG...AAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460308.6
ENST00000469672.5
CDS-3UTR CCA 90 bp AAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGTCCTGGCTGATGCGCTaGTCCCCAGTAGGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: KVLMPMYSQSSLDISSLWSWLMR*SPVGSG
Trigger: GCCTGACCCTACTGGGGACCAGCGCATCAGCCAGGA...CCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554453.5
CDS-3UTR TCA 90 bp GCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: AGSAFTRICMCLNLKSPSAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: QDAAQIVKGVDADVQPELCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...GAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GTTATCGATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAACCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: VIDVIPQHVEGVVRTAPEPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...TTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATCGATAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSIDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp AGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: RAPWTSAPSGSEGVSAACDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...GCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LVSPEGRRPATVWLSFQKLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...CTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
ENST00000556517.1
CDS-3UTR TCA 90 bp GGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GPQDEIPEDAHRPEPACASMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...AGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CTGGCTGATGCGCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTAGAGTCCTGGGAGACTaGACACTGGGAGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: LADALVRVIDVIPQHVEGRVLGD*TLGDSV
Trigger: CACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCT...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR TCA 90 bp GATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCAGCAGGCTGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: DAAQIVKGVDADCRKQQAATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...AGCCTGCTGCTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCGACCGCCATGACCTaGGACCCGAGGGACTCTGGA +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIATAMT*DPRDSG
Trigger: TCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000557588.5
CDS-3UTR TCA 90 bp GGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GVVRTAPEVEAVKVLSEVRLQVN*SKLFSQ
Trigger: CTGGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...GACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTCTCAGGCCATCCTTGTaGGCACGGGTACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: AVASPPGTEHHTSSSPPALRPSL*ARVPSQ
Trigger: TTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAG...AGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCAACCGCTGGAGAAATTaGAGATCTAACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GVVRTAPEVEAVKVLSEVNRWRN*RSNLGL
Trigger: CAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTT...GACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp TGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGACGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CRCTARAPWTSAPSGSEGRSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...TCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp AGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: SLLAMLLSCRQNRSTSWLRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: VIPQHVEGVVRTAPEVEAQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...CGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: RSSLSVLLVSPEGRRPATAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...TGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: HVQKRLPKLPNSVRVASHPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...GTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AAQFCACSQPHLRASWTGPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp ACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCACCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSAPSGSEGVSAACGLSSPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGAGGGGGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GRGGHSVLSATATPRFEGGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...CCCCTCAAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp CCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACCAGCTGCTGGCCGATaGGATAGAGCTCGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PCEHGYLLKALPMSHTDEPAAGR*DRARSP
Trigger: TGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGG...TTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp CAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCACTACCTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: QLLADAIELALHFLCQGTTFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGT...AGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGGATCTAACCTGGGCCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: VTQDAAQIVKGVDADCRKDLTWA*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATC...CTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460308.6
CDS-3UTR CCA 90 bp GCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: ALVSVVDEGERGDDELAGIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...GCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GTGCTCAGTGAGGTCCTTCCTCCAGCTCACATACAGCAGGTTGCAGGTGAACTGATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: VLSEVLPPAHIQQVAGELIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...CAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: AGHAAELPAESLHVLADAPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QALCPCHQVGQACQFQEPTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...AGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: GDRTSYQFQSTCWSRPSVDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCTGAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: HFLCQGTGGFIKHCVLRLRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...CAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp AGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: RTHVAPARDLCGEPELDLFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...AAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSILSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCCCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CCA 90 bp TCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGCCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: SPEAAQFCACSQPHLRASPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...CGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGCCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 4 (lower is better)
Translates to: ARDLCGEPELDLRCQSSWCTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...CCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp GGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTGAGGGGTGGGAGACTGAACACTaGGAGATTCAGTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRGGHSVLSATATPRFEGWETEH*EIQCPP
Trigger: TGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCA...CCCCTCAAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp AACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGACCTGGGCTCAGCCCACGAGGCAGCAGAGTCCTaGGAGACTGAACACTGGGAG +
Preference number: 4 (lower is better)
Translates to: NTGRFSVPHRNLDLGSAHEAAES*ETEHWE
Trigger: CTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGCCTC...GTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAAGCACTTCAAGCATATaGAGGCTCTGGCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGESTSSI*RLWLRQ
Trigger: CTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCT...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp TCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SCDFRDMSRSVSRSCPILNRSTS*LMRWSR
Trigger: ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
CDS-3UTR CCA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCGAGACCACCACCACATaGAGATCAGGCTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: THVAPARDLCGEPELDLRETTTT*RSGCPS
Trigger: AGAAGGGCAGCCTGATCTCCATGTGGTGGTGGTCTC...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555904.1
3UTR CAA 72 bp AGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: SSSPPAGPGPLS*PPSWTGLPIPR
Trigger: TCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CAA 72 bp CGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAGAACATCATACCAGTT +
Preference number: 4 (lower is better)
Translates to: RLQVEESGKGEP*HLPRGQNIIPV
Trigger: AACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGERLQVN*SKLFSV
Trigger: CACGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR TCA 90 bp CTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLGVLHRTHVAPARDLCGTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...GCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp CAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QHVEGVVRTAPEVEAVKVTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...CACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTGCTCAGTGAGGTCCTTCCTCCAGCTCACATACAGCAGGTTGCAGGTGAACTGGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: VLSEVLPPAHIQQVAGELGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...CAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACCTCACTGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: ALVSVVDEGERGDDELAGGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...GCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TTTAGGCTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGCATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: FRLRSLIRGLSEEGAEMEHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...CTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000557588.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000557588.5
CDS-3UTR TCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGTCGGGGTTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: PIPRTSRSSHHRQNLSRGCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...ACCCCGACTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATATGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQICWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR TCA 90 bp TCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: SPAAGRCDRARSPLPLSGDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...CCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCGATCTCGCAGTCCTGTaGCTTCAGGGACATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSDLAVL*LQGHVQ
Trigger: CTGGACATGTCCCTGAAGTCACAGGACTGCGAGATC...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: EPELDLRCQSSWSLLRAALGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAEGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp CTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGTTCAGAACCAAGGAATaGAACTTCTCAAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LVSPEGRRPATVWLSFQKFRTKE*NFSRLC
Trigger: GCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAA...CTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCACTGCTAGGGGTCCTGCACAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PPQKPRPGLSPPLLGVLHSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...GTGCAGGACCCCTAGCAGTGGTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTCTATGTGGCGAACCTaGGCTCGATCTTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSISMWRT*ARSSLS
Trigger: TGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGA...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR TCA 90 bp TGCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CWSRPSVLATKLDRPANSRLQVN*SKLFSQ
Trigger: CTGGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR GCA 90 bp CGGGGAGATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGDDELAGHAAELPAESLQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...GAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGGTCCCGTGGAGTTCAGGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: CRQNRSTSWLMRWSRGVQAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...CTGAACTCCACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TCCACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: STSSVRALVASSSTAYFGQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp ACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: TSESVVDRSMSWVKQLMRQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTGGAGCAAGGAGGTCTTaGCAGTGCCCGTGTTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSVVDEGERGDDELAGHAGARRS*QCPCCL
Trigger: CAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCC...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: VLMPMYSQSSLDISSLWVKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...GACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: VSTGTFSRLCRCPTLMNVKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...GACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp CACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCTGAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: HFLCQGTGGFIKHCVLRLRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...CAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VSTGTFSRLCRCPTLMNVRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...GACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp GCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AAQIVKGVDADVQPELLGQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...TCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp TTGGGTTCTTTCTCCTCCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCAAAGGAGAGCCGTTaGATCTCCCCCGGGGACAGA +
Preference number: 4 (lower is better)
Translates to: LGSFSSSGHPCEHGYLLKAKESR*ISPGDR
Trigger: TCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGC...CTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGGAGGAGAAAGAACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp GGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: GTEHHTSSSPPAGPGPLSGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...GGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp GGTGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGACCCATGTGGCTCCTaGACGGGATCTATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GGFIKHCVLRLQVEESGKDPCGS*TGSMWR
Trigger: TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTC...TTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR GCA 90 bp GCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCGATCTCCTTGGTGTCTaGCACCAGCAGTCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALVSVVDEGERGDDELAGDLLGV*HQQSPG
Trigger: CCCTGGAGACTGCTGGTGGCAGACACCAAGGAGATC...GCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR GCA 90 bp TCTCATCATCGGCAGAACCTGAGTCGGGGTAGACCTCCTTCAGGGGATATATCAACATGGAGATCAGGCTaGCCTGGCCGCTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHHRQNLSRGRPPSGDISTWRSG*PGRWQR
Trigger: CCTCTGCCAGCGGCCAGGGCAGCCTGATCTCCATGT...TGATATATCCCCTGAAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGCCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QVGQACQFQEPQDPLIIGNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...GCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQINRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000557588.5
CDS-3UTR CCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAAACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PEPACALEALVSVVDEGETARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: GFIKHCVLRLQVEESGKGRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...TCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GCAGCAGAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAATTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AAESWETEHWEIQCPPQKFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...TTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCTGGGAGACTGAACACTaGGAGATTCAGTGTCCCCCA +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFWETEH*EIQCPP
Trigger: TGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCA...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIRPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000557588.5
CDS-3UTR CCA 90 bp AAGGAAAGGACCACACAGAGTGTAGAAAGGACTGAGTTGGGGCGCCTACGGGTTAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGT +
Preference number: 4 (lower is better)
Translates to: KERTTQSVERTELGRLRVNRSTS*LMRWSG
Trigger: ACCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...AACCCGTAGGCGCCCCAACTCAGTCCTTTCTACACTCTGTGTGGTCCTTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGGATCACAAATTGCTCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMDHKLL*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGAGCAATTTGTGATC...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGATCACAAATTGCTCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIDHKLL*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGAGCAATTTGTGATC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: VSVVDEGERGDDELAGHANRSTS*LMRWSR
Trigger: ACGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCTCCTTGCCACCAAGTTaGACTGTAGCTGGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSTGTFSRLCRCPTLMNVSLPPS*TVAGAP
Trigger: GGGAGCACCAGCTACAGTCCAACTTGGTGGCAAGGA...GACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556517.1
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: AGSAFTRICMCLNLKSPSNRSTS*LMRWSP
Trigger: TGGGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554453.5
CDS-3UTR TCA 90 bp CAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QVEESGKGEPLHLPRGQNTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...GTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PWTSAPSGSEGVSAACGLTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...CAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCGCTCCACGTCCTGGCTaGTGCGCTGGTCCGGGTTAT +
Preference number: 4 (lower is better)
Translates to: AENGDCDDNVTQDAAQIVAPRPG*CAGPGY
Trigger: ATAACCCGGACCAGCGCATCAGCCAGGACGTGGAGC...GACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: GQVDELGEAADEVDAHKGPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...GCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAACCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: QDEIPEDAHRPEPACALEPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp ATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: MMSLLAMLLSCRQNRSTSDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCAGCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: PATSESVVDRSMSWVKQLDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...CAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ARAPWTSAPSGSEGVSAAKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...GGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp TGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTGTAGCCAGCCACATCTaGGAGCGTCGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: CPCHQVGQACQFQEPQDPVASHI*ERRGQV
Trigger: GACCTGTCCACGACGCTCTCAGATGTGGCTGGCTAC...AGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp ATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: MMSLLAMLLSCRQNRSTSLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...GGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CTGGCTGATGCGCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LADALVRVIDVIPQHVEGLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GCAGCAGAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAAATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: AAESWETEHWEIQCPPQKIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...TTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp CCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAAATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PCEHGYLLKALPMSHTDEIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...TTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR TCA 90 bp GGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCTTCAGAACCAAGGAATaGAACTTCTCAAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVVRTAPEVEAVKVLSEVFRTKE*NFSRLC
Trigger: GCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAA...GACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553486.5
CDS-3UTR TCA 90 bp CTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LLGVLHRTHVAPARDLCGSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...GCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR TCA 90 bp ACTGAGTTGGGGCGCCTACGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: TELGRLRVIDVIPQHVEGRLQVN*SKLFSQ
Trigger: CTGGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGTAGGCGCCCCAACTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR TCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFRLQVN*SKLFSQ
Trigger: CTGGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACCTCAGGCCATCCTTGTaGGCACGGGTACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: LVSTGTFSRLCRCPTLMNLRPSL*ARVPSQ
Trigger: TTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAG...GTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp CGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCCTTCCTCCAAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: RTAPEVEAVKVLSEVLPPKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...TGGAGGAAGGACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp TTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: LEALVSVVDEGERGDDELAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...AAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: LGVLHRTHVAPARDLCGERNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR GCA 90 bp GATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DVIPQHVEGVVRTAPEVEQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...CTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: QHVEGVVRTAPEVEAVKVAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...CACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTTTGGAAGCACCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: AAGSAFTRICMCLNLWKHQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GTGCTTCCAAAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555617.5
CDS-3UTR GCA 90 bp CAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QRRAVASPPGTEHHTSSSPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...ACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCAGCAGAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAAAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: AAESWETEHWEIQCPPQKKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...TTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR GCA 90 bp GGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAAAGTCCGTCAGCATCTaGACTGAGCCCCGTGTACTC +
Preference number: 4 (lower is better)
Translates to: GFIKHCVLRLQVEESGKGKSVSI*TEPRVL
Trigger: GAGTACACGGGGCTCAGTGCAGATGCTGACGGACTT...TCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CTGGCTGATGCGCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTCAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LADALVRVIDVIPQHVEGQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGTCGGGGTCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PIPRTSRSSHHRQNLSRGQFQST*WSRPSV
Trigger: GACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTG...ACCCCGACTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: HCVLRLQVEESGKGEPLHGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...ATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCAACTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFNFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTT...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCATCCCCAGCACCTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: GTFSRLCRCPTLMNVIPSTFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGT...GCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR GCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCCACTCGGTTCTCTCTaGTACTGCTACTCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGPLGSL*YCYSPF
Trigger: AAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGG...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR GCA 90 bp GCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCCCCACTTACCAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: APARDLCGEPELDLRCQSPTYQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGGTAAGTGGG...GGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS-3UTR GCA 90 bp GATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCCCACTTACCAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: DERHPQLLADAIELALHFPTYQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGGTAAGTGGG...GAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000557588.5
CDS-3UTR CCA 90 bp ATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: MSLLAMLLSCRQNRSTSWICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...CCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGETARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATTGCCGCTGGCCACCCTaGGGGTGTGTCCAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDCRWPP*GCVQAP
Trigger: TGGGGCTTGGACACACCCCCAGGGTGGCCAGCGGCA...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCAGGAGGGGGCAGAGATaGAGACCCGCTCAAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AGSAFTRICMCLNLKSPSRRGQR*RPAQGE
Trigger: TTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCT...GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp CAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATACCAGTTCCAGTCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: QRRAVASPPGTEHHTSSSLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...ACTGGAACTGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGTGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAACCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: GGFIKHCVLRLQVEESGKPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...TTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACCTCTGTCAGGGCACTaGTGGCTTCATCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: PEPACALEALVSVVDEGEPLSGH*WLHQAL
Trigger: CAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGG...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCCTAACTACACAACACTaGCAAGTGGAAAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GEPELDLRCQSSWSLLRALTTQH*QVEREM
Trigger: CATCTCCCTTTCCACTTGCCAGTGTTGTGTAGTTAG...GGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp CCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGT +
Preference number: 4 (lower is better)
Translates to: PIKVLFTTVPRMKYPKMLRPEGL*SPAAPS
Trigger: ACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCT...GAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000553745.5
CDS-3UTR CCA 90 bp CAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCGGATGTCCACAGGGCTaGAGAGGTTCAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: QDAAQIVKGVDADVQPELGCPQG*RGSARL
Trigger: CAACCTGGCTGAACCTCTCCAGCCCTGTGGACATCC...GAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554453.5
CDS-3UTR TCA 90 bp GCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AILVSTGTFSRLCRCPTLTAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...CAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGGTGAAGGTGCTCAGTaGGGTCCTTCCTCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIGEGAQ*GPSSSS
Trigger: TGAGCTGGAGGAAGGACCTCACTGAGCACCTTCACC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000557588.5
CDS-3UTR TCA 90 bp AACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGACATCCCGCAGCACGTTaGGGGTGTAGTACGCACGGC +
Preference number: 4 (lower is better)
Translates to: NVTQDAAQIVKGVDADCRHPAAR*GCSTHG
Trigger: GCCGTGCGTACTACACCCTCAACGTGCTGCGGGATG...TCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460308.6
CDS-3UTR TCA 90 bp CAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: QDAAQIVKGVDADVQPELPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...GAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR TCA 90 bp GGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GTEHHTSSSPPAGPGPLSLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...GGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CEHGYLLKALPMSHTDEREGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...ACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR TCA 90 bp GTAGGTAATCAGCACTTCAAGCATATGGAGGCTCTGGCTGAGGCAGCAGAGTCCATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGNQHFKHMEALAEAAESIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...GGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTGATTACCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR TCA 90 bp GCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: AAGRGGHSVLSATATPRFSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...AAAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR TCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCTCAGGCCATCCTTGTaGGCACGGGTACCTTCTCAA +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGELRPSL*ARVPSQ
Trigger: TTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAG...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTAACCGCTGGAGAAATTaGAGATCTAACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGNRWRN*RSNLGL
Trigger: CAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTT...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAACCGCTGGAGAAATTaGAGATCTAACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRGQVDELGEAADEVDAHNRWRN*RSNLGL
Trigger: CAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTT...GTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp TCTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCAGCCATGCTGCTGAGCTaGCGGCAGAATCGCTCCACG +
Preference number: 4 (lower is better)
Translates to: SPDAPASSQWGPSKFCSPAMLLS*RQNRST
Trigger: CGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGC...TGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CTGGCTGATGCGCTGGTCCGGGTTATCGATGTCATCCCGCAGCACGTTGAGGGTACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: LADALVRVIDVIPQHVEGTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...ACCCTCAACGTGCTGCGGGATGACATCGATAACCCGGACCAGCGCATCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: GVVRTAPEVEAVKVLSEVAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...GACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: HRTHVAPARDLCGEPELDRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...ATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR GCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: ADVQPELLGHQLPLGLKEQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...CTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: PWTSAPSGSEGVSAACGLAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...CAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: PCHQVGQACQFQEPQDPLQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: AAGSAFTRICMCLNLKSPQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEPLKEK*CVCWLC
Trigger: GCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGG...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: AAGSAFTRICMCLNLKSPRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTCGACAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: AQFCACSQPHLRASWTGRQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...TCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: HRTHVAPARDLCGEPELDQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...ATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp ACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTCTTCTTCTTTTTAGCTaGCTATTCACAGCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TTVPRMKYPKMLTGPSQPLLLFS*LFTALQ
Trigger: CTGCAGGGCTGTGAATAGGCAGCTAAAAAGAAGAAG...AGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CCA 90 bp GGTCTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATGCTTTGTGCTTTCTATTGCAGATCTAACCTaGGCCTGGCGCCAGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GLSEDFGHSNSTSCFVLSIADLT*AWRQLR
Trigger: CCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAAT...AGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp ACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: TVPRMKYPKMLTGPSQPVICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...CACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGAAGCATATGGAGGCTCTaGCTGAGGCAGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ESWETEHWEIQCPPQKPRSIWRL*LRQQSP
Trigger: AGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCT...TCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp AACACTGGGAGATTCAGTGTCCCCCACAGAAACCTAGACCTGGGCTCAGCCCACCAGACCAAAGGCCCCTaGAAGTTAGTGGTTCAGGTT +
Preference number: 4 (lower is better)
Translates to: NTGRFSVPHRNLDLGSAHQTKGP*KLVVQV
Trigger: AACCTGAACCACTAACTTCCAGGGGCCTTTGGTCTG...GTGGGCTGAGCCCAGGTCTAGGTTTCTGTGGGGGACACTGAATCTCCCAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGGGATTTACTTTCATTTaGGTTAAGGTAGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLGFTFI*VKVGQT
Trigger: GGTCTGCCCTACCTTAACCCAAATGAAAGTAAATCC...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACCCCTAGTTCAGTACTaGGTAGAGTCCGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIPLVQY*VESEEG
Trigger: CCCCTCCTCGGACTCTACCCAGTACTGAACTAGGGG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000557588.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATATCCTGGCTGATGCGCTaGTCCCGTGGAGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQISWLMR*SRGVQN
Trigger: GTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGA...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACGAGGTTCAGCCAGGTTaGGGGGCCGCCTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHEVQPG*GAACRK
Trigger: CTTTCTACAGGCGGCCCCCCAACCTGGCTGAACCTC...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554453.5
3UTR CAA 72 bp TCGGAGATCTTTAGGCTCAGATCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTCA +
Preference number: 4 (lower is better)
Translates to: SEIFRLRSLIRG*SEEGAEMETRS
Trigger: TGAGCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CAA 72 bp AGGCTCTGTCCCTCGGAGATCTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATG +
Preference number: 4 (lower is better)
Translates to: RLCPSEIFRLRS*IRGLSEEGAEM
Trigger: CATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGGACAGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
3UTR CAA 72 bp AAGGAAAGGACCACACAGAGTGTAGAAAGGACTGAGTaGGGGCGCCTACGGGTTATCGATGTCATCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KERTTQSVERTE*GRLRVIDVIPQ
Trigger: CTGCGGGATGACATCGATAACCCGTAGGCGCCCCAACTCAGTCCTTTCTACACTCTGTGTGGTCCTTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR TCA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATTGCTGGCCATGCTGCTaGGCTGCCGGCAGAATCGCT +
Preference number: 4 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDCWPCC*AAGRIA
Trigger: AGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCA...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: DAAQIVKGVDADCRKQQAPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...AGCCTGCTGCTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460308.6
ENST00000469672.5
CDS-3UTR TCA 90 bp TTTAGGCTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGCCACGGTCCCCAGGATaGAATACCCGAAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: FRLRSLIRGLSEEGAEMEPRSPG*NTRRCS
Trigger: TGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGG...CTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: VSTGTFSRLCRCPTLMNVDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...GACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GGATCTCGCAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: GSRSPVTSGTCPEASPEAKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...AGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTTAGGCTCAGATCCTTaGTTAGGGGTTTGTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRSLIRGLSEEGAEMETRLGSDP*LGVCQR
Trigger: CCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAA...GCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEEGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GTCTGTCCTCATGTGCTCCACATGCCCAGCTCTGTAGAAAGCAGCAGGCTCCGCAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: VCPHVLHMPSSVESSRLRSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...GCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCACATGAGGACAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp GTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGTTCAGAACCAAGGAATaGAACTACAAGAGACCACCA +
Preference number: 4 (lower is better)
Translates to: VLHRTHVAPARDLCGEPEFRTKE*NYKRPP
Trigger: TGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAA...CTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000555904.1
CDS-3UTR GCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAAAACCGCTGGAGAAATTaGAGATCTAACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PEPACALEALVSVVDEGENRWRN*RSNLGL
Trigger: CAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTT...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAAAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AGRRVGQRRAVASPPGTEKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...TTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: DDELAGHAAELPAESLHVAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR GCA 90 bp ACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: TVPRMKYPKMLTGPSQPVAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...CACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: PWTSAPSGSEGVSAACGLAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...CAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCCGGTCTGTCCTCATGTaGTCCACATGCCCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: CDDNVTQDAAQIVKGVDARSVLM*STCPAL
Trigger: CAGAGCTGGGCATGTGGAGCACATGAGGACAGACCG...GGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGACGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CRCTARAPWTSAPSGSEGRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...TCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: ERRGQVDELGEAADEVDAQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...TGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: DAAQIVKGVDADCRKQQAQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...AGCCTGCTGCTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
CDS-3UTR GCA 90 bp TCCACTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCCAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: STSSVRALVASSSTAYFGQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...GCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGGGCTTCATCAAGCACTaGGTACTTCGGCTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEGFIKH*VLRLQV
Trigger: TACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp TTGGGTTCTTTCTCCTCCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGCCACTCGGTTCTCTCTaGTACTGCTACTCCCCGTTT +
Preference number: 4 (lower is better)
Translates to: LGSFSSSGHPCEHGYLLKPLGSL*YCYSPF
Trigger: AAACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGG...CTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGGAGGAGAAAGAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CCA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: TGPMWLLHGIYVANLSSIICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp CAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGGGATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: QGAKLCGTQVSIDPAENGICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...CCCATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
CDS-3UTR CCA 90 bp ACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCAATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: TSAPSGSEGVSAACGLSSICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
CDS-3UTR CCA 90 bp GCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ATSESVVDRSMSWVKQLMPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GGTCTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATGCTTTGTGCTTTCTACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLSEDFGHSNSTSCFVLSTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...AGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp CTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCAGCTTACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRIHPNLHVLEPKISLQLTARAP*TSAPSG
Trigger: CCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGT...AAGCTGGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: EALVSVVDEGERGDDELADRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...AGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp AGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: RPANSKNLKILSSSAEPEDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...CTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTGACAGGTCGATGAGCTaGGTGAAGCAGCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: QVDELGEAADEVDAHKGIDRSMS*VKQLMR
Trigger: CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTC...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CCA 90 bp GAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTTGCACAGGACCCATGTaGCTCCTGCACGGGATCTAT +
Preference number: 4 (lower is better)
Translates to: EALVSVVDEGERGDDELACTGPM*LLHGIY
Trigger: ATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCA...AGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR TCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAAACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QDEIPEDAHRPEPACALETAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: DVQPELLGHQLPLGLKESDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...AGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp TGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: WLHQALRTSAAGRRVGQRKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...CCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp GGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: GQVDELGEAADEVDAHKGKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...GCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR TCA 90 bp TTTAGGCTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGGAAGGGTCCCGTCAGTaGAGAATGGCTTTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FRLRSLIRGLSEEGAEMEEGSRQ*RMAFVA
Trigger: TGCCACAAAAGCCATTCTTCACTGACGGGACCCTTC...CTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp TCCTCCTCCACAGAGTTTCAGAACCAAGGAATGAAACTTCTCAAGGCTCTGCCGATCATCGGCAGAACCTaGGTCGGGGTAGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSSTEFQNQGMKLLKALPIIGRT*VGVDLL
Trigger: AAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGAT...CGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
CDS-3UTR TCA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR TCA 90 bp TTCTCCTCCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGTTCAGAACCAAGGAATaGAACTACAAGAGACCACCA +
Preference number: 4 (lower is better)
Translates to: FSSSGHPCEHGYLLKALPFRTKE*NYKRPP
Trigger: TGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAA...CGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGGAGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR GCA 90 bp GTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCTGCATAACCGCTGGAGAAATTaGAGATCTAACCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: VLMPTVESSRLRIHPNLHNRWRN*RSNLGL
Trigger: CAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTT...ATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGTCGGCATCAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460308.6
CDS-3UTR GCA 90 bp ACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: TSESVVDRSMSWVKQLMRTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...CCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGACGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GFIKHCVLRLQVEESGKGRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...TCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp GGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQVDELGEAADEVDAHKGQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...GCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: RRGQVDELGEAADEVDAHAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...GTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GACCAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: DQGAKLCGTQVSIDPAENAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...ATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp TCCTCCTCCACAGAGTTTCAGAACCAAGGAATGAAACTTCTCAAGGCTCTGCCGAGGGGATATATCACCTaGTCCCGAAGGGTCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SSSTEFQNQGMKLLKALPRGYIT*SRRVPS
Trigger: TGACGGGACCCTTCGGGAGCAGGTGATATATCCCCT...CGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTGTGCTTTGGAACAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: QDEIPEDAHRPEPACALEQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...TTCCAAAGCACAGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR GCA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAGGGTTTTGTCTAATTTaGTGTTGTTGTTCCCTAATA +
Preference number: 4 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKGFCLI*CCCSLI
Trigger: TATTAGGGAACAACAACAGCAAATTAGACAAAACCC...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp GCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCCTCATGTGCTCCACATaGCCAGCTCTGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AAGSAFTRICMCLNLKSPLMCST*PALTRK
Trigger: TTTCCTTGTCAGAGCTGGGCATGTGGAGCACATGAG...GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554453.5
CDS-3UTR CCA 90 bp AGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAGCCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: RPANSKNLKILSSSAEPEPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...CTCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR CCA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCAGCTTCTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: LRIHPNLHVLEPKISLQLLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...AAGCTGGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CCA 90 bp GCAGCAGAGTCCTGGGAGACTGAACACTGGGAGATTCAGTGTCCCCCACAGAAAGTGGAAAGGGAGATGTaGGGAGAAGTGAAAAACCCT +
Preference number: 4 (lower is better)
Translates to: AAESWETEHWEIQCPPQKVEREM*GEVKNP
Trigger: AGGGTTTTTCACTTCTCCCCACATCTCCCTTTCCAC...TTTCTGTGGGGGACACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp TCCACAGAGTTTCAGAACCAAGGAATGAAACTACAAGAGACCACCACCACATGGGAGACCACCACCACATaGAGATCAGGCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: STEFQNQGMKLQETTTTWETTTT*RSGCPG
Trigger: GCCAGGGCAGCCTGATCTCCATGTGGTGGTGGTCTC...CCATGTGGTGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAAACTCTGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR CCA 90 bp TCTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCATCCTGGCTGATGCGCTaGTCCCGTGGAGTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: SPDAPASSQWGPSKFCSPSWLMR*SRGVQN
Trigger: GTTCTGAACTCCACGGGACCAGCGCATCAGCCAGGA...TGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000556119.5
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACTGACAAGGAAAGGCTaGGATGTCCACAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQILTRKG*DVHRAV
Trigger: TACAGCCCTGTGGACATCCCAGCCTTTCCTTGTCAG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553998.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAAGGTTGCAGGTGAACTaGTCAAAGCTCTTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIRLQVN*SKLFSV
Trigger: CACGCTGAAGAGCTTTGATCAGTTCACCTGCAACCT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000553745.5
ENST00000557588.5
CDS-3UTR TCA 90 bp AGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTTTGGAAGCACTGAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SRLRIHPNLHVLEPLEALKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...CAGTGCTTCCAAAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555617.5
CDS-3UTR GCA 90 bp GACCAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: DQGAKLCGTQVSIDPAENKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...ATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
CDS-3UTR GCA 90 bp ACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTGAACTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: TGLPIPRTSRSSHHRQNLNFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTT...CAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553486.5
CDS-3UTR GCA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTCTCATGTGCTCCACATaGCCAGCTCTGACAAGGAAA +
Preference number: 4 (lower is better)
Translates to: QVDELGEAADEVDAHKGILMCST*PALTRK
Trigger: TTTCCTTGTCAGAGCTGGGCATGTGGAGCACATGAG...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553998.5
CDS-3UTR CCA 90 bp GGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTCCCCATAGTACTGACTaGGGATCAAGCCAACCTGGT +
Preference number: 4 (lower is better)
Translates to: GDCDDNVTQDAAQIVKGVPHSTD*GSSQPG
Trigger: ACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGG...AACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CCA 90 bp TCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SCDFRDMSRSVSRSCPILPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CCA 90 bp AAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVLMPMYSQSSLDISSLWPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CCA 90 bp TTCCTCCTCCACAGAGTTTCAGAACCAAGGAATGAAACTACAAGAGACCACCACTTCCAGTCCACCTGCTaGTCCAGGCCCTCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: FLLHRVSEPRNETTRDHHFQSTC*SRPSVL
Trigger: AAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA...GTGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
3UTR CAA 72 bp TGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGGATGAAATACCCGAAG +
Preference number: 4 (lower is better)
Translates to: CTSFITMGPIKV*FTTVPRMKYPK
Trigger: CTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQITAGCR*TDQSSS
Trigger: TGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000557588.5
CDS-3UTR TCA 90 bp TTTAGGCTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCAGAGATGGAGAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: FRLRSLIRGLSEEGAEMEKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...CTCCATCTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR TCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR TCA 90 bp ACTTTCATTTGGGTTAAGGTAGGGCAGACCAAAGGCCCCTGGAAGTTAGTGGTTAGAGTCCTGGGAGACTaGACACTGGGAGATTCAGTG +
Preference number: 4 (lower is better)
Translates to: TFIWVKVGQTKGPWKLVVRVLGD*TLGDSV
Trigger: CACTGAATCTCCCAGTGTTCAGTCTCCCAGGACTCT...AACCACTAACTTCCAGGGGCCTTTGGTCTGCCCTACCTTAACCCAAATGAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAAAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PEPACALEALVSVVDEGEKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp AAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: KVLMPMYSQSSLDISSLWKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...CCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
CDS-3UTR GCA 90 bp TCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SKVLMPMYSQSSLDISSLTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...GAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR GCA 90 bp TCTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCAACCTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: SPDAPASSQWGPSKFCSPTFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGT...TGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAACCCGAATCTGCATGTaGTTGAACCTTTGGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQITRICM*LNLWKH
Trigger: GTGCTTCCAAAGGTTCAAGCACATGCAGATTCGGGT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555617.5
ENST00000557588.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCATTCACCCGAATCTaGATGTGCTTGAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIAFTRI*MCLNLW
Trigger: CCAAAGGTTCAAGCACATGCAGATTCGGGTGAATGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555617.5
ENST00000557588.5
CDS-3UTR GCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACCTCATGTGCTCCACATaGCCAGCTCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHLMCST*PALKSP
Trigger: GGGAGATTTTAGAGCTGGGCATGTGGAGCACATGAG...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS-3UTR CCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGGATCTAACCTGGGCCTaGCGCCAGCTCCGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLDLTWA*RQLRAR
Trigger: CCGCGCCCGGAGCTGGCGCCAGGCCCAGGTTAGATC...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp CAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: QDAAQIVKGVDADVQPELICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...GAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
CDS-3UTR CCA 90 bp GTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: VKGVDADVQPELLGHQLPPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...AGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CCA 90 bp GCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAACTGTCAGGGCACTGGTaGCTTCATCAAGCACTGCGT +
Preference number: 4 (lower is better)
Translates to: AECASLPTKLSNTNLEIQLSGHW*LHQALR
Trigger: ACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAG...TTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp GCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAAAGCATATGGAGGCTCTaGCTGAGGCAGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AECASLPTKLSNTNLEIQSIWRL*LRQQSP
Trigger: AGGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCT...TTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR TCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACGATAGTCAAAGGTGTTaGTGCCGATGTACAGCCAGA +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHDSQRC*CRCTAR
Trigger: TCTGGCTGTACATCGGCATCAACACCTTTGACTATC...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: PIKVLFTTVPRMKYPKMLKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...GAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR TCA 90 bp GGTCTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATGCTTTGTGCTTTCTAGATGTGGGGAGAAGTaGAAAACCCTGGGCATAAGA +
Preference number: 4 (lower is better)
Translates to: GLSEDFGHSNSTSCFVLSRCGEK*KTLGIR
Trigger: TCTTATGCCCAGGGTTTTTCACTTCTCCCCACATCT...AGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQITRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553998.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCCTCGGAGATCTTTAGGCTCAGATCCTTGATTAGGGGTTTGTCAGAGGAGGGGGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: PSEIFRLRSLIRGLSEEGAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...CCCCTCCTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAAGATCTCCGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp ACTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: TVESSRLRIHPNLHVLEPAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...AGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
ENST00000557588.5
CDS-3UTR GCA 90 bp ACTTTCATTTGGGTTAAGGTAGGGCAGACCAAAGGCCCCTGGAAGTTAGTGGTTAACTTCTCAAGGCTCTaGCGATGTCCCACACTGATG +
Preference number: 4 (lower is better)
Translates to: TFIWVKVGQTKGPWKLVVNFSRL*RCPTLM
Trigger: CATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTT...AACCACTAACTTCCAGGGGCCTTTGGTCTGCCCTACCTTAACCCAAATGAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIICRNR*RNCRSN
Trigger: GTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGAT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000557588.5
CDS-3UTR CCA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR TCA 90 bp TCCTCCTCCACAGAGTTTCAGAACCAAGGAATGAAACTTCTCAAGGCTCTGCCGAGCTTCATTCCACTTTaGTTCTCATCAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: SSSTEFQNQGMKLLKALPSFIPL*FSSAPI
Trigger: GATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCT...CGGCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000557588.5
CDS-3UTR GCA 90 bp GATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: DDNVTQDAAQIVKGVDADTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...GTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460308.6
ENST00000469672.5
CDS-3UTR GCA 90 bp GGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTACCCGAATCTGCATGTaGTTGAACCTAAAATCTCCC +
Preference number: 4 (lower is better)
Translates to: GDCDDNVTQDAAQIVKGVTRICM*LNLKSP
Trigger: GGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGT...AACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553998.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCGTAACTCAGGATGCTaGCCAGATAGTCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: VTQDAAQIVKGVDADCRKRNSGC*PDSQRC
Trigger: ACACCTTTGACTATCTGGGCAGCATCCTGAGTTACG...CTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
CDS-3UTR GCA 90 bp CTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCAGCTTGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: LRIHPNLHVLEPKISLQLAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...AAGCTGGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: AENGDCDDNVTQDAAQIVAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...GACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp AGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAATACAGGGTGCTAAGCTCTaGGGGACTCAGGTCTCCATA +
Preference number: 4 (lower is better)
Translates to: RVCFPSHQAVKYKSGDSIQGAKL*GTQVSI
Trigger: TATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTG...TATTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR TCA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATAAATGGGGATTGCGATaGCAACGTAACTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDKWGLR*QRNSGC
Trigger: GCATCCTGAGTTACGTTGTCATCGCAATCCCCATTT...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR TCA 90 bp CAAGGAATGAAACTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCATTTCAGAACCAAGGAATaGAACTTCTCAAGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QGMKLLKALPMSHTDERHFRTKE*NFSRLC
Trigger: GCAGAGCCTTGAGAAGTTTCATTCCTTGGTTCTGAA...ATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGTTTCATTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000553486.5
CDS-3UTR GCA 90 bp CTCCTGATGCACCAGCTTCATCACAATGGGGCCCATCAAAGTTTTGTTCACCACGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: LLMHQLHHNGAHQSFVHHAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...GTGGTGAACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGGTGCATCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR GCA 90 bp GGTCTGAGTGAGGACTTTGGGCACAGTAACTCCACCTCATGCTTTGTGCTTTCTAGTAACTCCACCTCATaGTTTGTGCTTTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GLSEDFGHSNSTSCFVLSSNSTS*FVLSGF
Trigger: AAACCCAGAAAGCACAAAGCATGAGGTGGAGTTACT...AGAAAGCACAAAGCATGAGGTGGAGTTACTGTGCCCAAAGTCCTCACTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLNRSTS*LMRWSG
Trigger: CCCGGACCAGCGCATCAGCCAGGACGTGGAGCGATT...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CCA 90 bp GCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAACCAGCTTCATCACAATaGGGCCCATCAAAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: AECASLPTKLSNTNLEIQPASSQ*GPSKFC
Trigger: ACAAAACTTTGATGGGCCCCATTGTGATGAAGCTGG...TTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp GCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAAAAAACCTTCAGTATCTaGAGGAACCGCTGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: AECASLPTKLSNTNLEIQKTFSI*RNRWRN
Trigger: ATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTT...TTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGAGGAATAGCACCCCATaGGGCCCAAAGTCCGTCAGC +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLRNSTP*GPKSVS
Trigger: GCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCT...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGAAGTTGGACTGTAGCTaGTGCTCCCAGGTGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLKLDCS*CSQVGS
Trigger: CGAGCCCACCTGGGAGCACCAGCTACAGTCCAACTT...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS-3UTR GCA 90 bp AGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAATAGCTGAAAATGGGGATTaGGATGACAACGTAACTCAG +
Preference number: 4 (lower is better)
Translates to: RVCFPSHQAVKYKSGDSIAENGD*DDNVTQ
Trigger: CTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGC...TATTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CCA 90 bp ACTTTCATTTGGGTTAAGGTAGGGCAGACCAAAGGCCCCTGGAAGTTAGTGGTTATGCTTTGTGCTTTCTaGGTTTTGTCTAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TFIWVKVGQTKGPWKLVVMLCAF*VLSNLL
Trigger: CAGCAAATTAGACAAAACCCAGAAAGCACAAAGCAT...AACCACTAACTTCCAGGGGCCTTTGGTCTGCCCTACCTTAACCCAAATGAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR GCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGCAACGTAACTCAGGATaGTGCCCAGATAGTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLQRNSG*CPDSQR
Trigger: CCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTG...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR GCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGCAAGTTGGACAGGCCTaGCAATTCCAAGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLQVGQA*QFQEPQ
Trigger: TTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTG...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR GCA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGGCATTCACCCGAATCTaGATGTGCTTGAACCTAAAA +
Preference number: 4 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLAFTRI*MCLNLK
Trigger: TTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGC...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS CCA 90 bp GGGCGCGGGCCCCGCGACCGCCATGACCTGAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGTTCAGTACTGGGTAGAGTCCGAGGA +
Preference number: 5 (lower is better)
Translates to: GRGPRDRHDLRPEGL*SPAAPSSVLGRVRG
Trigger: TCCTCGGACTCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGGCCCGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000477803.5
ENST00000489207.1
ENST00000493427.1
ENST00000557554.5
ENST00000557588.5
CDS CCA 90 bp AACCCACTGGAACCTCCCAAGGAGGAGAGGTGGGAACGCCTGGCCTaGGTCAGATGGGAGAGGCTCTGGCCGGCAGACAGCAGGGCAAGG +
Preference number: 5 (lower is better)
Translates to: NPLEPPKEERWERLA*VRWERLWPADSRAR
Trigger: CCTTGCCCTGCTGTCTGCCGGCCAGAGCCTCTCCCATCTGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTCCAGTGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 90 bp TCCAGAACCCACTGGAACCTCCCAAGGAGGAGAGGTGGGAACGCCTaGCCTGGGTCAGATGGGAGAGGCTCTGGCCGGCAGACAGCAGGG +
Preference number: 5 (lower is better)
Translates to: SRTHWNLPRRRGGNA*PGSDGRGSGRQTAG
Trigger: CCCTGCTGTCTGCCGGCCAGAGCCTCTCCCATCTGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTCCAGTGGGTTCTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS-3UTR CAA 90 bp TCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: SSWSLLRAADPPQCGSPSLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...GGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: ELDLRCQSSWSLLRAADPPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...CGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS GCA 90 bp GTTCAGACTTCCAGTCCTGGGCCCAAGCATAGCAGGGCCAGCACCTaGCTACCTGTAGCTGGTGCTCCCAGGTGGGCTCGGGTCCTGAGG +
Preference number: 5 (lower is better)
Translates to: VQTSSPGPKHSRAST*LPVAGAPRWARVLR
Trigger: CCTCAGGACCCGAGCCCACCTGGGAGCACCAGCTACAGGTAGGCAGGTGCTGGCCCTGCTATGCTTGGGCCCAGGACTGGAAGTCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 90 bp GAACCTCCCAAGGAGGAGAGGTGGGAACGCCTGGCCTGGGTCAGATaGGAGAGGCTCTGGCCGGCAGACAGCAGGGCAAGGTCCCTACAA +
Preference number: 5 (lower is better)
Translates to: EPPKEERWERLAWVR*ERLWPADSRARSLQ
Trigger: TTGTAGGGACCTTGCCCTGCTGTCTGCCGGCCAGAGCCTCTCCCATCTGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS-3UTR CAA 90 bp CCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: PPGTEHHTSSSPPAGPGPGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...AGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS GCA 90 bp GGAGGGGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTaGTGGCTCTGCCGCTGGCCACCCTGGGGGTCGTGGAGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GGGRDGDPLKEKCCV*WLCRWPPWGSWSSE
Trigger: TTCTGAACTCCACGACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557554.5
CDS GCA 90 bp TTTGTCAGAGGAGGGGGCAGAGATGGAGACCCGCTCAAGGAGAAATaGTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGGGTCGTGG +
Preference number: 5 (lower is better)
Translates to: FVRGGGRDGDPLKEK*CVCWLCRWPPWGSW
Trigger: CCACGACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCCCCTCCTCTGACAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557554.5
CDS CCA 90 bp CAAAAGACGGAGCTGCACACAGCCCACCCTCCCTCCAGAACCCACTaGAACCTCCCAAGGAGGAGAGGTGGGAACGCCTGGCCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: QKTELHTAHPPSRTH*NLPRRRGGNAWPGS
Trigger: TGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTCCAGTGGGTTCTGGAGGGAGGGTGGGCTGTGTGCAGCTCCGTCTTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 90 bp CCCACTTCCCTGGGCCCCCTCGCCTACTGTACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGC +
Preference number: 5 (lower is better)
Translates to: PTSLGPLAYCTARAP*TSAPSGSEGVSAAC
Trigger: GCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACAGTAGGCGAGGGGGCCCAGGGAAGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: EPELDLRCQSSWSLLRAARSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLRSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CAA 90 bp CGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: RSSLSVLLVSPEGRRPATVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...TGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp CCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: PRGQNIIPVPVHLLVQALPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...GAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: DVIPQHVEGVVRTAPEVEGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...CTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GTGGCAGGAATAGCACCCCATGGGGCCCAAAGTCCGTCAGCATCTGCACTGAGCGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: VAGIAPHGAQSPSASALSGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...GCTCAGTGCAGATGCTGACGGACTTTGGGCCCCATGGGGTGCTATTCCTGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCCCACAGAGACGGCGTTaGATAGAGAGGAAGGTGCGG +
Preference number: 5 (lower is better)
Translates to: LAMLLSCRQNRSTSWLMRPQRRR*IERKVR
Trigger: CCGCACCTTCCTCTCTATCAAACGCCGTCTCTGTGG...GCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460308.6
CDS-3UTR CAA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCAGTCCTTGCCACCAAGTaGGACTGTAGCTGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPVLATK*DCSWCS
Trigger: GGAGCACCAGCTACAGTCCAACTTGGTGGCAAGGAC...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS CCA 90 bp CTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTaGTCCCTGGAGCCAATGACACAGAGTAGCTGGACCCAGGGAGAT +
Preference number: 5 (lower is better)
Translates to: LLSCRQNRSTSWLMR*SLEPMTQSSWTQGD
Trigger: ATCTCCCTGGGTCCAGCTACTCTGTGTCATTGGCTCCAGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp TTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCTGGAGCCAATGACACAGAGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLAMLLSCRQNRSTS*LMRWSLEPMTQSSW
Trigger: CCAGCTACTCTGTGTCATTGGCTCCAGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp ATAAGGCAGAGCACAGGGACCGGTTCTGGCCCTGGAGGGAAGGGATaGGATTTCATGCCGCTGCTGCTGCTCCTGCTGCTGCCGTCAGGA +
Preference number: 5 (lower is better)
Translates to: IRQSTGTGSGPGGKG*DFMPLLLLLLLPSG
Trigger: TCCTGACGGCAGCAGCAGGAGCAGCAGCAGCGGCATGAAATCCCATCCCTTCCCTCCAGGGCCAGAACCGGTCCCTGTGCTCTGCCTTAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp GGAGGTAGAGAGGTGTGGGAAGGGAAGCAGACCAGTCCAACCCCATaGTTCCCACTTCCCTGGGCCCCCTCGCCTACTGTACAGCCAGAG +
Preference number: 5 (lower is better)
Translates to: GGREVWEGKQTSPTP*FPLPWAPSPTVQPE
Trigger: CTCTGGCTGTACAGTAGGCGAGGGGGCCCAGGGAAGTGGGAACCATGGGGTTGGACTGGTCTGCTTCCCTTCCCACACCTCTCTACCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CCA 90 bp GGGGGCAGAGATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCCTGGGGGTCGTGGAGTTCAGAACAA +
Preference number: 5 (lower is better)
Translates to: GGRDGDPLKEKCCVC*LCRWPPWGSWSSEQ
Trigger: TTGTTCTGAACTCCACGACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATCTCTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557554.5
CDS-3UTR CAA 90 bp GAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ELDLRCQSSWSLLRAADPSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...CGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp CCCCCGGGGACAGAACATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PPGTEHHTSSSPPAGPGPLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...AGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATGTTCTGTCCCCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp ACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: THVAPARDLCGEPELDLRGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...GCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp CTGGCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTA +
Preference number: 5 (lower is better)
Translates to: LAAGRGGHSVLSATATPRPGPLS*PPSWTV
Trigger: TACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...ACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556517.1
CDS-3UTR CAA 90 bp GTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAAAGCCAGTCCTTGCCACCAAGTaGGACTGTAGCTGGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VSPEGRRPATVWLSFQKPVLATK*DCSWCS
Trigger: GGAGCACCAGCTACAGTCCAACTTGGTGGCAAGGAC...TGGCTTTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS TCA 90 bp AGAAAGCACTGTTCAAAGGCTGGGAGGTGTGACATGGTGCCAGGGTaGGTCACAGCCTCGGTCCCGCAGAGGAGGAGCAGCAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: RKHCSKAGRCDMVPG*VTASVPQRRSSSSG
Trigger: GCCAGAGCTGCTGCTCCTCCTCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS CCA 90 bp TGGGAAGGGAAGCAGACCAGTCCAACCCCATGGTTCCCACTTCCCTaGGCCCCCTCGCCTACTGTACAGCCAGAGCTCCTTGGACATCAG +
Preference number: 5 (lower is better)
Translates to: WEGKQTSPTPWFPLP*APSPTVQPELLGHQ
Trigger: CTGATGTCCAAGGAGCTCTGGCTGTACAGTAGGCGAGGGGGCCCAGGGAAGTGGGAACCATGGGGTTGGACTGGTCTGCTTCCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp CACACTGATGAACGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: HTDERHPQLLADAIELALRSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...GAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACGTTCATCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000474270.1
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CAA 90 bp CCACCACTGCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTAGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: PPLLGVLHRTHVAPARDLVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...TAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGCAGTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp CTGGCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LAAGRGGHSVLSATATPREPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...ACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CAA 90 bp ATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: IPQHVEGVVRTAPEVEAVEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...CACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CCCCGTGTACTCGTCCAGAGGCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: PRVLVQRPPRTRSKEVLPEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...TGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGCCTCTGGACGAGTACACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CCAGCCACATCTGAGAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PATSESVVDRSMSWVKQLGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...CAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTCTCAGATGTGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CGTCATCCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RHPQLLADAIELALHFLCGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...ACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGGATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CAA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: PMWLLHGIYVANLSSIFALPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CAA 90 bp GAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATACCATTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: ESGKGEPLHLPRGQNIIPLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...TGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TTCTCCTCCTCAGGCCATCCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: FSSSGHPCEHGYLLKALPLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...CGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGGATGGCCTGAGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CAA 90 bp GTGCTCCACATGCCCAGCTCTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VLHMPSSVESSRLRIHPNRSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...ATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCATCCCCAGCCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: GTFSRLCRCPTLMNVIPSPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...GCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: WLHQALRTSAAGRRVGQRGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...CCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCACTCTGGTAGATCACAAATaGCTCTGGCGCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: QLLADAIELALHFLCQGTLVDHK*LWRQLR
Trigger: CCGGAGCTGGCGCCAGAGCAATTTGTGATCTACCAG...AGTGCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553745.5
CDS TCA 90 bp AGGAGGCCATTCTGCAAGAAAGCACTGTTCAAAGGCTGGGAGGTGTaGCATGGTGCCAGGGTGAGTCACAGCCTCGGTCCCGCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: RRPFCKKALFKGWEV*HGARVSHSLGPAEE
Trigger: CTCCTCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCTTGCAGAATGGCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS CCA 90 bp CTGATTTCAGAGGCCTCACATAAGGCAGAGCACAGGGACCGGTTCTaGCCCTGGAGGGAAGGGATGGGATTTCATGCCGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LISEASHKAEHRDRF*PWREGMGFHAAAAA
Trigger: AGCAGCAGCAGCGGCATGAAATCCCATCCCTTCCCTCCAGGGCCAGAACCGGTCCCTGTGCTCTGCCTTATGTGAGGCCTCTGAAATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp GCCATTCTGCAAGAAAGCACTGTTCAAAGGCTGGGAGGTGTGACATaGTGCCAGGGTGAGTCACAGCCTCGGTCCCGCAGAGGAGGAGCA +
Preference number: 5 (lower is better)
Translates to: AILQESTVQRLGGVT*CQGESQPRSRRGGA
Trigger: TGCTCCTCCTCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCTTGCAGAATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS-3UTR CAA 90 bp ATCTCGCAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: ISQSCDFRDMSRSVSRSCGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...GCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTGCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PMWLLHGIYVANLSSIFAGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CAA 90 bp AGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RAPWTSAPSGSEGVSAACGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...GCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTGCCGCTGGCCACCCTGGGGCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: PAQGEMLCLLALPLATLGRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...CCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: GEPELDLRCQSSWSLLRAHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...GGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: EPELDLRCQSSWSLLRAAHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...GGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: DDELAGHAAELPAESLHVSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: VLLVSPEGRRPATVWLSFFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...GAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp CCAGGCCCTCTGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: PGPLSLPPSWTGLPIPRTVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...GGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp ACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCAGCCTCTGCAGATGATCTCCTaGGTGTCTGCCACCAGCAGT +
Preference number: 5 (lower is better)
Translates to: TTVPRMKYPKMLTGPSQPLQMIS*VSATSS
Trigger: ACTGCTGGTGGCAGACACCAAGGAGATCATCTGCAG...AGGCTGGCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CAA 90 bp ACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTA +
Preference number: 5 (lower is better)
Translates to: TGPMWLLHGIYVANLSSIPGPLS*PPSWTV
Trigger: TACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...GATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481348.5
CDS-3UTR CAA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTGGCCAGGCTGAGCCTTaGGGTTCTTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: AAQFCACSQPHLRASWTGGQAEP*GSFSSS
Trigger: TGAGGAGGAGAAAGAACCCAAAGGCTCAGCCTGGCC...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS GCA 90 bp ATTCTGCAAGAAAGCACTGTTCAAAGGCTGGGAGGTGTGACATGGTaGCAGGGTGAGTCACAGCCTCGGTCCCGCAGAGGAGGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILQESTVQRLGGVTW*QGESQPRSRRGGAA
Trigger: TGCTGCTCCTCCTCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCTTGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS CCA 90 bp TCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTaGACTGTAACAGACCCAGAGGGCAGGATGTCCATGAAATGGCCA +
Preference number: 5 (lower is better)
Translates to: SSPPAGPGPLSLPPS*TVTDPEGRMSMKWP
Trigger: TGGCCATTTCATGGACATCCTGCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS-3UTR CAA 90 bp CTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAAGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: LGVLHRTHVAPARDLCGEEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...TTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS-3UTR CAA 90 bp GATGATGAGCTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: DDELAGHAAELPAESLHVEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...GACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAGCTCATCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CAA 90 bp AAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTTGGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: KHCVLRLQVEESGKGEPLGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...CAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTCGATCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: AQFCACSQPHLRASWTGRSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...TCGACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTGTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: GHAAELPAESLHVLADALFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...CAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CTARAPWTSAPSGSEGVSLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...AGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: VKGVDADVQPELLGHQLPRSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...AGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GTGCTCCACATGCCCAGCTCTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: VLHMPSSVESSRLRIHPNVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...ATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGAGCTGGGCATGTGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GCTGCCCAGATAGTCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: AAQIVKGVDADVQPELLGPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...TCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGACTATCTGGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: RSSLSVLLVSPEGRRPATELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...TGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCAGGCCAGGCTGAGCCTTaGGGTTCTTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ERRGQVDELGEAADEVDAGQAEP*GSFSSS
Trigger: TGAGGAGGAGAAAGAACCCAAAGGCTCAGCCTGGCC...TGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CTTGCTGGCCATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTGGCTGATCGAATCTGCATGTGCTaGAACCTTTGGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: LAGHAAELPAESLHVLADRICMC*NLWKHW
Trigger: CCAGTGCTTCCAAAGGTTCAAGCACATGCAGATTCG...ATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCATGGCCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555617.5
CDS CCA 90 bp AGGGTGAGTCACAGCCTCGGTCCCGCAGAGGAGGAGCAGCAGCTCTaGCTGCTGAGCCGTTTTAATGAGCTGCCGGAAATAAGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: RVSHSLGPAEEEQQL*LLSRFNELPEIRVL
Trigger: TAGAACTCTTATTTCCGGCAGCTCATTAAAACGGCTCAGCAGCCAGAGCTGCTGCTCCTCCTCTGCGGGACCGAGGCTGTGACTCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS CCA 90 bp CCTAAGACAGGGAGCAGGACGCCAAGTAGGGCCACGTGGACTCTCTaGATCCTCATTCTCCTGAGGATACTCACAGAAAGGCAACAGCCC +
Preference number: 5 (lower is better)
Translates to: PKTGSRTPSRATWTL*ILILLRILTERQQP
Trigger: GGGCTGTTGCCTTTCTGTGAGTATCCTCAGGAGAATGAGGATCCAGAGAGTCCACGTGGCCCTACTTGGCGTCCTGCTCCCTGTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp GTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGCCATGCTGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: VSVVDEGERGDDELAGHAGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...AGCATGGCCAGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CAA 90 bp TCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: SPEAAQFCACSQPHLRASEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...CGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCATGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: HQLPLGLKESLQPAVCPHEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...ATGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCCTTCCTCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: VRTAPEVEAVKVLSEVLPRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...AGGAAGGACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp CATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTCTGTGCGTGTAGCCAGCCACCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: HVQKRLPKLPNSVRVASHHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...GTGGCTGGCTACACGCACAGAATTGGGCAGCTTCGGGAGACGCTTCTGGACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GAGTCGGGCAAAGGAGAGCCGTTGCATCTCCCCCGGGGACAGAACATCATACCACACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: ESGKGEPLHLPRGQNIIPHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...TGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CTTCCTCTGTCAGGGCACTGGTGGCTTCATCAAGCACTGCGTACTTCGGCTGCATCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LPLSGHWWLHQALRTSAASLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...TGCAGCCGAAGTACGCAGTGCTTGATGAAGCCACCAGTGCCCTGACAGAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTCATCCCCAGCTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: GTFSRLCRCPTLMNVIPSSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...GCTGGGGATGACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CAA 90 bp CCCCAGCTGCTGGCCGATGCGATAGAGCTCGCTCTCCACTTCCTCTGTCAGGGCTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: PQLLADAIELALHFLCQGFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...GCCCTGACAGAGGAAGTGGAGAGCGAGCTCTATCGCATCGGCCAGCAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CTGGCCGCTGGCAGAGGAGGCCACTCGGTTCTCTCTGCTACTGCTACTCCCCGTTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: LAAGRGGHSVLSATATPRFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...ACGGGGAGTAGCAGTAGCAGAGAGAACCGAGTGGCCTCCTCTGCCAGCGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR CAA 90 bp TGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCGGAGCAAGGAGGTCTaGCCAGTGCCCGTGTTGCCT +
Preference number: 5 (lower is better)
Translates to: CPCHQVGQACQFQEPQDPRSKEV*PVPVLP
Trigger: AGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCG...AGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TCTCATCATCGGCAGAACCTGAGTCGGGGTAGACCTCCTTCAGGGGATATATCACCAGGCCCTCTGTCCTaGCCACCAAGTTGGACAGGC +
Preference number: 5 (lower is better)
Translates to: SHHRQNLSRGRPPSGDISPGPLS*PPSWTG
Trigger: GCCTGTCCAACTTGGTGGCAAGGACAGAGGGCCTGG...TGATATATCCCCTGAAGGAGGTCTACCCCGACTCAGGTTCTGCCGATGATGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGTCTGGGCAGCAGCATTaGAAAACGACTGCAGATGAT +
Preference number: 5 (lower is better)
Translates to: QHVEGVVRTAPEVEAVKVSGQQH*KTTADD
Trigger: ATCATCTGCAGTCGTTTTCAAATGCTGCTGCCCAGA...CACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CAA 90 bp CCTTGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAAGGCCAGGCTGAGCCTTaGGGTTCTTTCTCCTCCTCA +
Preference number: 5 (lower is better)
Translates to: PCEHGYLLKALPMSHTDEGQAEP*GSFSSS
Trigger: TGAGGAGGAGAAAGAACCCAAAGGCTCAGCCTGGCC...TTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CAA 90 bp CCCGAGCCAGCCTGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACTGGTAGATCACAAATaGCTCTGGCGCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: PEPACALEALVSVVDEGELVDHK*LWRQLR
Trigger: CCGGAGCTGGCGCCAGAGCAATTTGTGATCTACCAG...TTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000556119.5
CDS CCA 90 bp GTTCCCAAGGGCATAAACTTGCACCCGACTGACCAGCCAAACATCTaGACTTTGGGGTCAGGAGCCGTTCCATTCCTTGACAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: VPKGINLHPTDQPNI*TLGSGAVPFLDRDP
Trigger: AGGGTCCCTGTCAAGGAATGGAACGGCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CCA 90 bp TCCTGGCTGATGCGCTGGTCCCTGGAGCCAATGACACAGAGTAGCTaGACCCAGGGAGATGGGCCCAAAGGTAGAGAGAACAAGAAACTT +
Preference number: 5 (lower is better)
Translates to: SWLMRWSLEPMTQSS*TQGDGPKGRENKKL
Trigger: AAGTTTCTTGTTCTCTCTACCTTTGGGCCCATCTCCCTGGGTCCAGCTACTCTGTGTCATTGGCTCCAGGGACCAGCGCATCAGCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp GCCCCAGAATCCGACCTTGGGTGTTTGACATACGCGTGTGGTATTTaGCGTGAGTCCTTGCCCCATTTACCTGCCTCAGGAGCTGCTATG +
Preference number: 5 (lower is better)
Translates to: APESDLGCLTYACGI*RESLPHLPASGAAM
Trigger: CATAGCAGCTCCTGAGGCAGGTAAATGGGGCAAGGACTCACGCCAAATACCACACGCGTATGTCAAACACCCAAGGTCGGATTCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 90 bp GGACACAACCCTAAGACAGGGAGCAGGACGCCAAGTAGGGCCACGTaGACTCTCTGGATCCTCATTCTCCTGAGGATACTCACAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GHNPKTGSRTPSRAT*TLWILILLRILTER
Trigger: CCTTTCTGTGAGTATCCTCAGGAGAATGAGGATCCAGAGAGTCCACGTGGCCCTACTTGGCGTCCTGCTCCCTGTCTTAGGGTTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp GAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGAGCTTGCTGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EALVSVVDEGERGDDELAGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...AGCAAGCTCATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: ERRGQVDELGEAADEVDAHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...TGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GACCAGGGTGCTAAGCTCTGCGGGACTCAGGTCTCCATAGACCCCGCTGAAAATCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: DQGAKLCGTQVSIDPAENHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...ATTTTCAGCGGGGTCTATGGAGACCTGAGTCCCGCAGAGCTTAGCACCCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000555617.5
ENST00000556119.5
CDS-3UTR CAA 90 bp AAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCTGGTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: KVLMPMYSQSSLDISSLWSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...CCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TGTGAGCACGGGTACCTTCTCAAGGCTCTGCCGATGTCCCACACTGATGAACGTTCCTTGATTAGGGGTTaGTCAGAGGAGGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: CEHGYLLKALPMSHTDERSLIRG*SEEGAE
Trigger: CTCTGCCCCCTCCTCTGACAAACCCCTAATCAAGGA...ACGTTCATCAGTGTGGGACATCGGCAGAGCCTTGAGAAGGTACCCGTGCTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553745.5
ENST00000556517.1
CDS-3UTR CAA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGATTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CAA 90 bp TTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: FIKHCVLRLQVEESGKGEVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...CTCTCCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp GTACGCACGGCCCCGGAAGTAGAGGCGGTGAAGGTGCTCAGTGAGGTCCTTCCTGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: VRTAPEVEAVKVLSEVLPELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...AGGAAGGACCTCACTGAGCACCTTCACCGCCTCTACTTCCGGGGCCGTGCGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GCTAGGGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: ARGPAQDPCGSCTGSMWRELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...TCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000555904.1
CDS-3UTR CAA 90 bp CTCGATCTTCGCTGTCAGTCCTCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCAAGATTTCCAGATCTCTaGACTCCAAGAGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: LDLRCQSSWSLLRAADPPRFPDL*TPRVIS
Trigger: AGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCT...TGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGAGGACTGACAGCGAAGATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS GCA 90 bp ATCTCTGGAGCACCCAAGCTCTTTTCTTACCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTGGACTGTAAC +
Preference number: 5 (lower is better)
Translates to: ISGAPKLFSYQFQST*WSRPSVLATKLDCN
Trigger: GTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTAAGAAAAGAGCTTGGGTGCTCCAGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CCA 90 bp GATGACCAAGAAGGAAACAAAACCTTCAGTATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAACCTGGGCCTGGCGCCAGCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: DDQEGNKTFSICRNR*RNCRSNLGLAPAPG
Trigger: GCCCGGAGCTGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTTGTTTCCTTCTTGGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356924.9
ENST00000460308.6
ENST00000470637.1
ENST00000475240.5
ENST00000477803.5
ENST00000481935.5
ENST00000489207.1
ENST00000493752.5
ENST00000553486.5
ENST00000554453.5
ENST00000557554.5
ENST00000557588.5
CDS CCA 90 bp CAGACGCTTGGCTCCATTAGACAGCATTGTGGGGAGCAGGTCTCCTaGTTTTCTGAGAAGCTCCCATTCCATCCCACGCTACGGAGACAA +
Preference number: 5 (lower is better)
Translates to: QTLGSIRQHCGEQVS*FSEKLPFHPTLRRQ
Trigger: TTGTCTCCGTAGCGTGGGATGGAATGGGAGCTTCTCAGAAAACCAGGAGACCTGCTCCCCACAATGCTGTCTAATGGAGCCAAGCGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp CAGAAAAGGGAGGAAACACACCCCCACAGCTTGCTTCCTGCTTCCTaGAGGCTAAGTTCCACTAGGCATTACGGTCACACTGGACTGGAG +
Preference number: 5 (lower is better)
Translates to: QKREETHPHSLLPAS*RLSSTRHYGHTGLE
Trigger: CTCCAGTCCAGTGTGACCGTAATGCCTAGTGGAACTTAGCCTCCAGGAAGCAGGAAGCAAGCTGTGGGGGTGTGTTTCCTCCCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS-3UTR CAA 90 bp CAGAGTGTAGAAAGGACTGAGTTGGGGCGCCTACGGGTTATCGATGTCATCCCGGAGCCAGCCTGTGCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: QSVERTELGRLRVIDVIPEPACA*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGCACAGGCTGGCTC...CGGGATGACATCGATAACCCGTAGGCGCCCCAACTCAGTCCTTTCTACACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470637.1
CDS-3UTR CAA 90 bp GGGCCCATCAAAGTTTTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: GPIKVLFTTVPRMKYPKMGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...CATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000553998.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GCTGCCCAATTCTGTGCGTGTAGCCAGCCACATCTGAGAGCGTCGTGGACAGGTCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AAQFCACSQPHLRASWTGRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...ACCTGTCCACGACGCTCTCAGATGTGGCTGGCTACACGCACAGAATTGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR CAA 90 bp TGGCTTCATCAAGCACTGCGTACTTCGGCTGCAGGTAGAAGAGTCGGGCAAAGGCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: WLHQALRTSAAGRRVGQRHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...CCTTTGCCCGACTCTTCTACCTGCAGCCGAAGTACGCAGTGCTTGATGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATTTGCCAGTGCCCGTGTaGCCTGTGATGAGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: CALEALVSVVDEGERGDDLPVPV*PVMSRL
Trigger: GAGCCTGCTCATCACAGGCAACACGGGCACTGGCAA...ATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGAGATTCAAGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: AECASLPTKLSNTNLEIQGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...TTGAATCTCCAGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CAA 90 bp TCCACAGAGTTTCAGAACCAAGGAATGAAACTACAAGAGACCACCACCACATGGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAG +
Preference number: 5 (lower is better)
Translates to: STEFQNQGMKLQETTTTWGKGEP*HLPRGQ
Trigger: CTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCC...CCATGTGGTGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAAACTCTGTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR CAA 90 bp GATGTCATCCCGCAGCACGTTGAGGGTGTAGTACGCACGGCCCCGGAAGTAGAGGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: DVIPQHVEGVVRTAPEVEELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...CTCTACTTCCGGGGCCGTGCGTACTACACCCTCAACGTGCTGCGGGATGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000553486.5
CDS-3UTR CAA 90 bp GGGTCCTGCACAGGACCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAAACCCAACCTTATTTaGGCTAAGGGGAAAGGGATT +
Preference number: 5 (lower is better)
Translates to: GSCTGPMWLLHGIYVANLKPNLI*AKGKGI
Trigger: AATCCCTTTCCCCTTAGCCAAAATAAGGTTGGGTTT...CAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGGTCCTGTGCAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CAA 90 bp ACTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTCTGGTAGATCACAAATaGCTCTGGCGCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: TVESSRLRIHPNLHVLEPLVDHK*LWRQLR
Trigger: CCGGAGCTGGCGCCAGAGCAATTTGTGATCTACCAG...AGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469672.5
ENST00000555617.5
CDS-3UTR CAA 90 bp CAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACACAAAGGCATTCTGGTAGATCACAAATaGCTCTGGCGCCAGCTCCGG +
Preference number: 5 (lower is better)
Translates to: QVDELGEAADEVDAHKGILVDHK*LWRQLR
Trigger: CCGGAGCTGGCGCCAGAGCAATTTGTGATCTACCAG...AATGCCTTTGTGTGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000469672.5
ENST00000553745.5
ENST00000556119.5
CDS GCA 90 bp AGAGGCCTAGAAGTTAGGCAGCAGCAGCAGCCTCCCACGCATCTTTaGACCAAAGCTAAGCTTGAGCTGAGAGGTACCCCAACCAACAAA +
Preference number: 5 (lower is better)
Translates to: RGLEVRQQQQPPTHL*TKAKLELRGTPTNK
Trigger: TTTGTTGGTTGGGGTACCTCTCAGCTCAAGCTTAGCTTTGGTGCAAAGATGCGTGGGAGGCTGCTGCTGCTGCCTAACTTCTAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 90 bp GAACCTGCACAACAAAGAAGCCTTCTGCAAAAAGCCAGAGCCTCCTaGCTGGTCAAAATAGACAGGGCAAGGCTGTGCACAGTGGCTCAC +
Preference number: 5 (lower is better)
Translates to: EPAQQRSLLQKARAS*LVKIDRARLCTVAH
Trigger: GTGAGCCACTGTGCACAGCCTTGCCCTGTCTATTTTGACCAGCCAGGAGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 90 bp TTCATCATGGCACATTTATCCTTGCAGACAGGAGGTAGAGAGGTGTaGGAAGGGAAGCAGACCAGTCCAACCCCATGGTTCCCACTTCCC +
Preference number: 5 (lower is better)
Translates to: FIMAHLSLQTGGREV*EGKQTSPTPWFPLP
Trigger: GGGAAGTGGGAACCATGGGGTTGGACTGGTCTGCTTCCCTTCCCACACCTCTCTACCTCCTGTCTGCAAGGATAAATGTGCCATGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp GATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: DDNVTQDAAQIVKGVDADGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...GTCGGCATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460308.6
ENST00000469672.5
CDS-3UTR CAA 90 bp TGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: CALEALVSVVDEGERGDDGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...ATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000556119.5
CDS-3UTR CAA 90 bp TTGTTCACCACGGTCCCCAGGATGAAATACCCGAAGATGCTCACAGGCCCGAGCCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LFTTVPRMKYPKMLTGPSRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...GCTCGGGCCTGTGAGCATCTTCGGGTATTTCATCCTGGGGACCGTGGTGAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GAGCGTCGTGGACAGGTCGATGAGCTGGGTGAAGCAGCTGATGAGGTAGATGCACGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: ERRGQVDELGEAADEVDARICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...TGCATCTACCTCATCAGCTGCTTCACCCAGCTCATCGACCTGTCCACGACGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553998.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: AGSAFTRICMCLNLKSPSHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCCGCATTCACCCGAATCTGCATCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: VLMPTVESSRLRIHPNLHHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...ATGCAGATTCGGGTGAATGCGGAGCCTGCTGCTTTCTACAGTCGGCATCAACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000555617.5
CDS-3UTR CAA 90 bp ACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCTGCAGCCTGCGGTCTGTCCTCATTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: TSAPSGSEGVSAACGLSSFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...TGAGGACAGACCGCAGGCTGCAGAGACTCCTTCAGACCCAGAGGGAGCTGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp TGTGCTTTGGAAGCACTGGTAAGTGTAGTAGACGAGGGTGAACGGGGAGATGATGTCCTTGCCACCAAGTaGGACAGGCCTGCCAATTCC +
Preference number: 5 (lower is better)
Translates to: CALEALVSVVDEGERGDDVLATK*DRPANS
Trigger: GGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGAC...ATCATCTCCCCGTTCACCCTCGTCTACTACACTTACCAGTGCTTCCAAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp GCCACCCAGAACCCGGAGCAAGGAGGTCTTGCCAGTGCCCGTGTTGCCTGTGATAGATTTCCAGATCTCTaGACTCCAAGAGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: ATQNPEQGGLASARVACDRFPDL*TPRVIS
Trigger: AGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCT...ATCACAGGCAACACGGGCACTGGCAAGACCTCCTTGCTCCGGGTTCTGGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481935.5
CDS-3UTR CAA 90 bp TCCTGGTCTCTCCTGAGGGCCGCCGACCCGCCACAGTGTGGCTCTCCTTCCAAATGGGTTTTGTCTAATTaGCTGTTGTTGTTCCCTAAT +
Preference number: 5 (lower is better)
Translates to: SWSLLRAADPPQCGSPSKWVLSN*LLLFPN
Trigger: ATTAGGGAACAACAACAGCAAATTAGACAAAACCCA...TTTGGAAGGAGAGCCACACTGTGGCGGGTCGGCGGCCCTCAGGAGAGACCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CAA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTGGAGAAAAATCTCAGTaGAGTGCCAGTCCGTCTAAC +
Preference number: 5 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGGEKSQ*SASPSN
Trigger: GTTAGACGGACTGGCACTCAACTGAGATTTTTCTCC...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS TCA 90 bp AGTGAGGCAAAACTCTGTTCCCAAGGGCATAAACTTGCACCCGACTaGCCAGCCAAACATCTGGACTTTGGGGTCAGGAGCCGTTCCATT +
Preference number: 5 (lower is better)
Translates to: SEAKLCSQGHKLAPD*PAKHLDFGVRSRSI
Trigger: AATGGAACGGCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTTGGGAACAGAGTTTTGCCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS TCA 90 bp GCTTTGAAACCACAGGTTGCAGATCTTCATAAGGGAAGGGGTGGGTaGAGGAAGGCATCACTTTCCTTGTCCCAGTGGGCATCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ALKPQVADLHKGRGG*RKASLSLSQWASLL
Trigger: CAGGAGAGATGCCCACTGGGACAAGGAAAGTGATGCCTTCCTTCACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS-3UTR CAA 90 bp TTCCAGAACAGCAGAGTGTGCTTCCCTTCCCACCAAGCTGTCAAATACAAATCTGGGGAGATGATGAGCTaGCTGGCCATGCTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: FQNSRVCFPSHQAVKYKSGEMMS*LAMLLS
Trigger: GCTCAGCAGCATGGCCAGCAAGCTCATCATCTCCCC...AGATTTGTATTTGACAGCTTGGTGGGAAGGGAAGCACACTCTGCTGTTCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS-3UTR CAA 90 bp TGTCCTTGCCACCAAGTTGGACAGGCCTGCCAATTCCAAGAACCTCAAGATCCTCACACAAAGGCATTCTaGCTGACCAGGGTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: CPCHQVGQACQFQEPQDPHTKAF*LTRVLS
Trigger: GCTTAGCACCCTGGTCAGCAAGAATGCCTTTGTGTG...AGGATCTTGAGGTTCTTGGAATTGGCAGGCCTGTCCAACTTGGTGGCAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474270.1
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTGTCAGTCCTCCTGGTTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: HGIYVANLSSIFAVSPPGFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...ACCAGGAGGACTGACAGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
ENST00000553486.5
CDS TCA 90 bp GCTTTGAAACCACAGGTTGCAGATCTTCATAAGGGAAGGGGTGGGTaGAGGAAGGCATCACTTTCCTTGTCCCAGTGGGCATCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: ALKPQVADLHKGRGG*RKASLSLSQWASLL
Trigger: AAGGAGAGATGCCCACTGGGACAAGGAAAGTGATGCCTTCCTTCACCCACCCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS-3UTR CAA 90 bp GATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATAGTCAAAGGTGTTGATGGGCCCATCAAAGTTTaGTTCACCACGGTCCCCAGG +
Preference number: 5 (lower is better)
Translates to: DCDDNVTQDAAQIVKGVDGPIKV*FTTVPR
Trigger: CCTGGGGACCGTGGTGAACAAAACTTTGATGGGCCC...ATCAACACCTTTGACTATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp TCAAAGGTGTTGATGCCGATGTACAGCCAGAGCTCCTTGGACATCAGCTCCCTCCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SKVLMPMYSQSSLDISSLRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...GAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACATCGGCATCAACACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTCACCCGAATCTGCATGTGCTTGAACCTAAAATCTCCCTCCCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: AGSAFTRICMCLNLKSPSRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCGGGTGAATGCGGAGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000554453.5
ENST00000556119.5
CDS-3UTR CAA 90 bp CAGTCCTGTGACTTCAGGGACATGTCCAGAAGCGTCTCCCGAAGCTGCCCAATTTTTAGGCTCAGATCCTaGATTAGGGGTTTGTCAGAG +
Preference number: 5 (lower is better)
Translates to: QSCDFRDMSRSVSRSCPIFRLRS*IRGLSE
Trigger: CTCTGACAAACCCCTAATCAAGGATCTGAGCCTAAA...AATTGGGCAGCTTCGGGAGACGCTTCTGGACATGTCCCTGAAGTCACAGGACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000469672.5
ENST00000481935.5
ENST00000553486.5
ENST00000553745.5
CDS-3UTR CAA 90 bp CCCATGTGGCTCCTGCACGGGATCTATGTGGCGAACCTGAGCTCGATCTTCGCTAGATTTCCAGATCTCTaGACTCCAAGAGTCATTTCT +
Preference number: 5 (lower is better)
Translates to: PMWLLHGIYVANLSSIFARFPDL*TPRVIS
Trigger: AGAAATGACTCTTGGAGTCAAGAGATCTGGAAATCT...AGCGAAGATCGAGCTCAGGTTCGCCACATAGATCCCGTGCAGGAGCCACATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356924.9
ENST00000481348.5
ENST00000481935.5
CDS-3UTR CAA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACGAATCTGCATGTGCTaGAACCTTTGGAAGCACTGG +
Preference number: 5 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIRICMC*NLWKHW
Trigger: CCAGTGCTTCCAAAGGTTCAAGCACATGCAGATTCG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555617.5
ENST00000557588.5
CDS TCA 90 bp TGTGAAGGAGACCCCCTATGTCTCATCTCACCACTAGGGCCATACTaGTTCCTATTCCCAATGAGTGACGTGACCTTGGGCAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: CEGDPLCLISPLGPY*FLFPMSDVTLGKSL
Trigger: AAGTGACTTGCCCAAGGTCACGTCACTCATTGGGAATAGGAATCAGTATGGCCCTAGTGGTGAGATGAGACATAGGGGGTCTCCTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS TCA 90 bp CCTTGTCCCAGTGGGCATCTCTCCTTAAGGACAGAAAGAATGAGGTaGGATCTGGGTACAGACCCCAAAACAGTCAAAGGAAGAGGAGAG +
Preference number: 5 (lower is better)
Translates to: PCPSGHLSLRTERMR*DLGTDPKTVKGRGE
Trigger: CTCTCCTCTTCCTTTGACTGTTTTGGGGTCTGTACCCAGATCTCACCTCATTCTTTCTGTCCTTAAGGAGAGATGCCCACTGGGACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS GCA 90 bp TGCCAATTCCAAGAACCTCAAGATCCTCTCATCATCGGCAGAACCTaGACAACAAAGAAGCCTTCTGCAAAAAGCCAGAGCCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: CQFQEPQDPLIIGRT*TTKKPSAKSQSLLA
Trigger: AGCCAGGAGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTGTGCAGGTTCTGCCGATGATGAGAGGATCTTGAGGTTCTTGGAATTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS-3UTR CAA 90 bp GATGCTGCCCAGATAGTCAAAGGTGTTGATGCCGACTGTAGAAAGCAGCAGGCTCATGTGCTTGAACCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: DAAQIVKGVDADCRKQQAHVLEP*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGGTTCAAGCACATG...AGCCTGCTGCTTTCTACAGTCGGCATCAACACCTTTGACTATCTGGGCAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555617.5
CDS-3UTR CAA 90 bp CCCGCTGAAAATGGGGATTGCGATGACAACGTAACTCAGGATGCTGCCCAGATACATGTGCTTGAACCTTaGGAAGCACTGGTAAGTGTA +
Preference number: 5 (lower is better)
Translates to: PAENGDCDDNVTQDAAQIHVLEP*EALVSV
Trigger: TACACTTACCAGTGCTTCCAAAGGTTCAAGCACATG...TATCTGGGCAGCATCCTGAGTTACGTTGTCATCGCAATCCCCATTTTCAGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000555617.5
ENST00000557588.5
CDS TCA 90 bp AGAGTTCTAGGAAGGAAAGGGGCAATGATCAGTTCTGCTAAATGCTaGATTAAACCAGAACCTGTGGCCTGGGCCCAGGAGTGGAAACAT +
Preference number: 5 (lower is better)
Translates to: RVLGRKGAMISSAKC*IKPEPVAWAQEWKH
Trigger: ATGTTTCCACTCCTGGGCCCAGGCCACAGGTTCTGGTTTAATTCAGCATTTAGCAGAACTGATCATTGCCCCTTTCCTTCCTAGAACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS-3UTR CAA 90 bp GTAGGTAATCAGCACTTCAAGCATATGGAGGCTCTGGCTGAGGCAGCAGAGTCCTGTGCTTTCTGGGTTTaGTCTAATTTGCTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: VGNQHFKHMEALAEAAESCAFWV*SNLLLL
Trigger: CAACAACAGCAAATTAGACAAAACCCAGAAAGCACA...GGACTCTGCTGCCTCAGCCAGAGCCTCCATATGCTTGAAGTGCTGATTACCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356924.9
CDS TCA 90 bp GACTGTGGGACAGTCTGCCCCAGGCAGAGAGGAATATTCTACCAATaGCACTGTTTAGACTTGCTGGAGCATGATGACAGTAAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: DCGTVCPRQRGIFYQ*HCLDLLEHDDSKKQ
Trigger: TTGCTTTTTACTGTCATCATGCTCCAGCAAGTCTAAACAGTGTCATTGGTAGAATATTCCTCTCTGCCTGGGGCAGACTGTCCCACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS GCA 90 bp ACATCTGAGGAATCAGTCCCACGTGGGCCAATAGCAAGATCAACGTaGTTAATAAAGGCAACTATCCCTTTAGTTCCCAGAAAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: TSEESVPRGPIARST*LIKATIPLVPRKGR
Trigger: CCTCCCTTTTCTGGGAACTAAAGGGATAGTTGCCTTTATTAAGCACGTTGATCTTGCTATTGGCCCACGTGGGACTGATTCCTCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS-3UTR CAA 90 bp TTCCTCCTCCACAGAGTTTCAGAACCAAGGAATGAAACTACAAGAGACCACCACGAGCTTCATTCCACTTaGATTCTCATCAGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: FLLHRVSEPRNETTRDHHELHST*ILISSH
Trigger: ATGGGAGCTGATGAGAATCAAAGTGGAATGAAGCTC...GTGGTGGTCTCTTGTAGTTTCATTCCTTGGTTCTGAAACTCTGTGGAGGAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481935.5
ENST00000556517.1
CDS-3UTR CAA 90 bp TTCATTTCTTACAGATCTCACACTTCCAGATTTCTCTTTAGCAAACATGATCTGCGAATCTGCATGTGCTaGAACCTAAAATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: FISYRSHTSRFLFSKHDLRICMC*NLKSPS
Trigger: GGAGGGAGATTTTAGGTTCAAGCACATGCAGATTCG...CAGATCATGTTTGCTAAAGAGAAATCTGGAAGTGTGAGATCTGTAAGAAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356924.9
ENST00000481935.5
CDS GCA 72 bp TCCAGTCCTGGGCCCAAGCATAGCAGGGCCAGCACCTaGCTACCTGTAGCTGGTGCTCCCAGGTGGGCTCGG +
Preference number: 6 (lower is better)
Translates to: SSPGPKHSRAST*LPVAGAPRWAR
Trigger: CCGAGCCCACCTGGGAGCACCAGCTACAGGTAGGCAGGTGCTGGCCCTGCTATGCTTGGGCCCAGGACTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 72 bp GAACCTCCCAAGGAGGAGAGGTGGGAACGCCTGGCCTaGGTCAGATGGGAGAGGCTCTGGCCGGCAGACAGC +
Preference number: 6 (lower is better)
Translates to: EPPKEERWERLA*VRWERLWPADS
Trigger: GCTGTCTGCCGGCCAGAGCCTCTCCCATCTGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 72 bp CACTGGAACCTCCCAAGGAGGAGAGGTGGGAACGCCTaGCCTGGGTCAGATGGGAGAGGCTCTGGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: HWNLPRRRGGNA*PGSDGRGSGRQ
Trigger: CTGCCGGCCAGAGCCTCTCCCATCTGACCCAGGCCAGGCGTTCCCACCTCTCCTCCTTGGGAGGTTCCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 72 bp GCCAGCACCTGCCTACCTGTAGCTGGTGCTCCCAGGTaGGCTCGGGTCCTGAGGGTCCCTCTCCCCACTTAC +
Preference number: 6 (lower is better)
Translates to: ASTCLPVAGAPR*ARVLRVPLPTY
Trigger: GTAAGTGGGGAGAGGGACCCTCAGGACCCGAGCCCACCTGGGAGCACCAGCTACAGGTAGGCAGGTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 72 bp CCCCGCGACCGCCATGACCTGAGACCCGAGGGACTCTaGAGCCCAGCTGCCCCTAGTTCAGTACTGGGTAGA +
Preference number: 6 (lower is better)
Translates to: PRDRHDLRPEGL*SPAAPSSVLGR
Trigger: TCTACCCAGTACTGAACTAGGGGCAGCTGGGCTCCAGAGTCCCTCGGGTCTCAGGTCATGGCGGTCGCGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000460308.6
ENST00000469672.5
ENST00000477803.5
ENST00000489207.1
ENST00000493427.1
ENST00000493752.5
ENST00000553745.5
ENST00000557554.5
ENST00000557588.5
CDS CCA 72 bp ATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCCAGTAGGGTCAGGCACA +
Preference number: 6 (lower is better)
Translates to: MLLSCRQNRSTS*LMRWSPVGSGT
Trigger: TGTGCCTGACCCTACTGGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475240.5
ENST00000554453.5
CDS CCA 72 bp GATGGAGACCCGCTCAAGGAGAAATGCTGTGTCTGCTaGCTCTGCCGCTGGCCACCCTGGGGGTCGTGGAGT +
Preference number: 6 (lower is better)
Translates to: DGDPLKEKCCVC*LCRWPPWGSWS
Trigger: ACTCCACGACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTCTCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557554.5
CDS GCA 72 bp CTGGAGGGAAGGGATGGGATTTCATGCCGCTGCTGCTaGTCCTGCTGCTGCCGTCAGGAGACCAGACGCTTG +
Preference number: 6 (lower is better)
Translates to: LEGRDGISCRCC*SCCCRQETRRL
Trigger: CAAGCGTCTGGTCTCCTGACGGCAGCAGCAGGAGCAGCAGCAGCGGCATGAAATCCCATCCCTTCCCTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS GCA 72 bp GACCCGCTCAAGGAGAAATGCTGTGTCTGCTGGCTCTaGCGCTGGCCACCCTGGGGGTCGTGGAGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: DPLKEKCCVCWL*RWPPWGSWSSE
Trigger: TTCTGAACTCCACGACCCCCAGGGTGGCCAGCGGCAGAGCCAGCAGACACAGCATTTCTCCTTGAGCGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557554.5
CDS CCA 72 bp TTGCCACCAAGTTGGACTGTAGCTGGTGCTCCCAGGTaGGCTCGGGTCCTGAGGGTCCCTCTCCCCACTTAC +
Preference number: 6 (lower is better)
Translates to: LPPSWTVAGAPR*ARVLRVPLPTY
Trigger: GTAAGTGGGGAGAGGGACCCTCAGGACCCGAGCCCACCTGGGAGCACCAGCTACAGTCCAACTTGGTGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS CCA 72 bp TGCCGGCAGAATCGCTCCACGTCCTGGCTGATGCGCTaGTCCCTGGAGCCAATGACACAGAGTAGCTGGACC +
Preference number: 6 (lower is better)
Translates to: CRQNRSTSWLMR*SLEPMTQSSWT
Trigger: GGTCCAGCTACTCTGTGTCATTGGCTCCAGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 72 bp ATGCTGCTGAGCTGCCGGCAGAATCGCTCCACGTCCTaGCTGATGCGCTGGTCCCTGGAGCCAATGACACAG +
Preference number: 6 (lower is better)
Translates to: MLLSCRQNRSTS*LMRWSLEPMTQ
Trigger: CTGTGTCATTGGCTCCAGGGACCAGCGCATCAGCCAGGACGTGGAGCGATTCTGCCGGCAGCTCAGCAGCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 72 bp CTGGGCCCCCTCGCCTACTGTACAGCCAGAGCTCCTTaGACATCAGCTCCCTCTGGGTCTGAAGGAGTCTCT +
Preference number: 6 (lower is better)
Translates to: LGPLAYCTARAP*TSAPSGSEGVS
Trigger: AGAGACTCCTTCAGACCCAGAGGGAGCTGATGTCCAAGGAGCTCTGGCTGTACAGTAGGCGAGGGGGCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CAA 72 bp AGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTAGCTGGTGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSSPPAGPGPLS*PPSWTVAGAPR
Trigger: CCTGGGAGCACCAGCTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481348.5
ENST00000556517.1
CDS CAA 90 bp TGCCGCTGCTGCTGCTCCTGCTGCTGCCGTCAGGAGACCAGACGCTaGGCTCCATTAGACAGCATTGTGGGGAGCAGGTCTCCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: CRCCCSCCCRQETRR*APLDSIVGSRSPGF
Trigger: AAAACCAGGAGACCTGCTCCCCACAATGCTGTCTAATGGAGCCAAGCGTCTGGTCTCCTGACGGCAGCAGCAGGAGCAGCAGCAGCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS GCA 72 bp GGGCAGGATGTCCATGAAATGGCCAGCCCTGCTACCTaGCATCATGGGGAACCTCCCTCACTCCCCAGCATA +
Preference number: 6 (lower is better)
Translates to: GQDVHEMASPAT*HHGEPPSLPSI
Trigger: TATGCTGGGGAGTGAGGGAGGTTCCCCATGATGGCAGGTAGCAGGGCTGGCCATTTCATGGACATCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS GCA 72 bp GAAAGCACTGTTCAAAGGCTGGGAGGTGTGACATGGTaGCAGGGTGAGTCACAGCCTCGGTCCCGCAGAGGA +
Preference number: 6 (lower is better)
Translates to: ESTVQRLGGVTW*QGESQPRSRRG
Trigger: TCCTCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS CAA 72 bp AGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTAACAGACCCAGAGGGC +
Preference number: 6 (lower is better)
Translates to: SSSPPAGPGPLS*PPSWTVTDPEG
Trigger: GCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS CAA 72 bp CGGCTGCAGGTAGAAGAGTCGGGCAAAGGAGAGCCGTaGCATCTCCCCCGGGGACAGAACATCATACCTGAG +
Preference number: 6 (lower is better)
Translates to: RLQVEESGKGEP*HLPRGQNIIPE
Trigger: CTCAGGTATGATGTTCTGTCCCCGGGGGAGATGCAACGGCTCTCCTTTGCCCGACTCTTCTACCTGCAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CAA 90 bp TTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTaGGACTGTAACAGACCCAGAGGGCAGGATGTCCATGAAATGGCC +
Preference number: 6 (lower is better)
Translates to: FQSTCWSRPSVLATK*DCNRPRGQDVHEMA
Trigger: GGCCATTTCATGGACATCCTGCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS CAA 90 bp CATCATACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTAACAGACCCAGAGGGCAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: HHTSSSPPAGPGPLS*PPSWTVTDPEGRMS
Trigger: GGACATCCTGCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTATGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CCA 72 bp ATGCGCTGGTCCCTGGAGCCAATGACACAGAGTAGCTaGACCCAGGGAGATGGGCCCAAAGGTAGAGAGAAC +
Preference number: 6 (lower is better)
Translates to: MRWSLEPMTQSS*TQGDGPKGREN
Trigger: GTTCTCTCTACCTTTGGGCCCATCTCCCTGGGTCCAGCTACTCTGTGTCATTGGCTCCAGGGACCAGCGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 72 bp CAAGAAAGCACTGTTCAAAGGCTGGGAGGTGTGACATaGTGCCAGGGTGAGTCACAGCCTCGGTCCCGCAGA +
Preference number: 6 (lower is better)
Translates to: QESTVQRLGGVT*CQGESQPRSRR
Trigger: TCTGCGGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS CAA 72 bp ACCTGCTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTaGGACTGTAACAGACCCAGAGGGCAGGATGTCCAT +
Preference number: 6 (lower is better)
Translates to: TCWSRPSVLATK*DCNRPRGQDVH
Trigger: ATGGACATCCTGCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS CAA 72 bp CTGAGGGCAGGGGCCCCAGAATCCGACCTTGGGTGTTaGACATACGCGTGTGGTATTTGGCGTGAGTCCTTG +
Preference number: 6 (lower is better)
Translates to: LRAGAPESDLGC*TYACGIWRESL
Trigger: CAAGGACTCACGCCAAATACCACACGCGTATGTCAAACACCCAAGGTCGGATTCTGGGGCCCCTGCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CAA 90 bp TTTCTTACCAGTTCCAGTCCACCTGCTGGTCCAGGCCCTCTGTCCTaGCCACCAAGTTGGACTGTAACAGACCCAGAGGGCAGGATGTCC +
Preference number: 6 (lower is better)
Translates to: FLTSSSPPAGPGPLS*PPSWTVTDPEGRMS
Trigger: GGACATCCTGCCCTCTGGGTCTGTTACAGTCCAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTAAGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS TCA 72 bp TTCTGCAAGAAAGCACTGTTCAAAGGCTGGGAGGTGTaGCATGGTGCCAGGGTGAGTCACAGCCTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: FCKKALFKGWEV*HGARVSHSLGP
Trigger: GGGACCGAGGCTGTGACTCACCCTGGCACCATGTCACACCTCCCAGCCTTTGAACAGTGCTTTCTTGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493427.1
CDS TCA 72 bp CAGGGGTGGGGGCCTCAGAATGCTGGGCGAAGGCTTTaGAACCACAGGTTGCAGATCTTCATAAGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: QGWGPQNAGRRL*NHRLQIFIREG
Trigger: CCCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAGCATTCTGAGGCCCCCACCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484380.2
ENST00000496015.5
CDS GCA 72 bp GCACCCAAGCTCTTTTCTTACCAGTTCCAGTCCACCTaGTGGTCCAGGCCCTCTGTCCTTGCCACCAAGTTG +
Preference number: 6 (lower is better)
Translates to: APKLFSYQFQST*WSRPSVLATKL
Trigger: CAACTTGGTGGCAAGGACAGAGGGCCTGGACCAGCAGGTGGACTGGAACTGGTAAGAAAAGAGCTTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CCA 72 bp TCACAACCCCACCCCAGCGCAGATTCCCAGTATTCTTaGTGCCCTCAAGTGGTGGAGGTTGCAAACTGCAGC +
Preference number: 6 (lower is better)
Translates to: SQPHPSADSQYS*CPQVVEVANCS
Trigger: GCTGCAGTTTGCAACCTCCACCACTTGAGGGCACCAAGAATACTGGGAATCTGCGCTGGGGTGGGGTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CCA 72 bp GGGAGCAGGACGCCAAGTAGGGCCACGTGGACTCTCTaGATCCTCATTCTCCTGAGGATACTCACAGAAAGG +
Preference number: 6 (lower is better)
Translates to: GSRTPSRATWTL*ILILLRILTER
Trigger: CCTTTCTGTGAGTATCCTCAGGAGAATGAGGATCCAGAGAGTCCACGTGGCCCTACTTGGCGTCCTGCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CCA 72 bp CCTAAGACAGGGAGCAGGACGCCAAGTAGGGCCACGTaGACTCTCTGGATCCTCATTCTCCTGAGGATACTC +
Preference number: 6 (lower is better)
Translates to: PKTGSRTPSRAT*TLWILILLRIL
Trigger: GAGTATCCTCAGGAGAATGAGGATCCAGAGAGTCCACGTGGCCCTACTTGGCGTCCTGCTCCCTGTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CAA 72 bp CTCACAACCCCACCCCAGCGCAGATTCCCAGTATTCTaGGTGCCCTCAAGTGGTGGAGGTTGCAAACTGCAG +
Preference number: 6 (lower is better)
Translates to: LTTPPQRRFPVF*VPSSGGGCKLQ
Trigger: CTGCAGTTTGCAACCTCCACCACTTGAGGGCACCAAGAATACTGGGAATCTGCGCTGGGGTGGGGTTGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CAA 72 bp GCAGGGGTGGGGGCCTCAGAATGCTGGGCGAAGGCTTaGAAACCACAGGTTGCAGATCTTCATAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: AGVGASECWAKA*KPQVADLHKGR
Trigger: CCTTCCCTTATGAAGATCTGCAACCTGTGGTTTCAAAGCCTTCGCCCAGCATTCTGAGGCCCCCACCCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484380.2
ENST00000496015.5
CDS CAA 90 bp AAGTGTGACAACACTCAGCCCCTGAGCTCGGTGGTGGTGGGAGGGTaGAGGATTCATCTTTCCTTCTCCACTCTCAGCTCTGGCAAGGCA +
Preference number: 6 (lower is better)
Translates to: KCDNTQPLSSVVVGG*RIHLSFSTLSSGKA
Trigger: TGCCTTGCCAGAGCTGAGAGTGGAGAAGGAAAGATGAATCCTCAACCCTCCCACCACCACCGAGCTCAGGGGCTGAGTGTTGTCACACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CAA 90 bp GACCTTGGGTGTTTGACATACGCGTGTGGTATTTGGCGTGAGTCCTaGCCCCATTTACCTGCCTCAGGAGCTGCTATGAGTAGTGGGCCC +
Preference number: 6 (lower is better)
Translates to: DLGCLTYACGIWRES*PHLPASGAAMSSGP
Trigger: GGGCCCACTACTCATAGCAGCTCCTGAGGCAGGTAAATGGGGCAAGGACTCACGCCAAATACCACACGCGTATGTCAAACACCCAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS TCA 72 bp CCTTGGGTGTTTGACATACGCGTGTGGTATTTGGCGTaGGTCCTTGCCCCATTTACCTGCCTCAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: PWVFDIRVWYLA*VLAPFTCLRSC
Trigger: GCAGCTCCTGAGGCAGGTAAATGGGGCAAGGACTCACGCCAAATACCACACGCGTATGTCAAACACCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS GCA 72 bp GAAGTTAGGCAGCAGCAGCAGCCTCCCACGCATCTTTaGACCAAAGCTAAGCTTGAGCTGAGAGGTACCCCA +
Preference number: 6 (lower is better)
Translates to: EVRQQQQPPTHL*TKAKLELRGTP
Trigger: TGGGGTACCTCTCAGCTCAAGCTTAGCTTTGGTGCAAAGATGCGTGGGAGGCTGCTGCTGCTGCCTAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CAA 72 bp AACTTGCACCCGACTGACCAGCCAAACATCTGGACTTaGGGGTCAGGAGCCGTTCCATTCCTTGACAGGGAC +
Preference number: 6 (lower is better)
Translates to: NLHPTDQPNIWT*GSGAVPFLDRD
Trigger: GTCCCTGTCAAGGAATGGAACGGCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CAA 90 bp AAGGGCATAAACTTGCACCCGACTGACCAGCCAAACATCTGGACTTaGGGGTCAGGAGCCGTTCCATTCCTTGACAGGGACCCTGAAACC +
Preference number: 6 (lower is better)
Translates to: KGINLHPTDQPNIWT*GSGAVPFLDRDPET
Trigger: GGTTTCAGGGTCCCTGTCAAGGAATGGAACGGCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS TCA 72 bp GGTCCTTCCTCCAGCTCACATACAGCAGGTTGCAGGTaGACTGATCAAAGCTCTTCAGCCAGTAGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GPSSSSHTAGCR*TDQSSSASRVR
Trigger: CCTGACCCTACTGGCTGAAGAGCTTTGATCAGTTCACCTGCAACCTGCTGTATGTGAGCTGGAGGAAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460308.6
ENST00000470637.1
ENST00000481935.5
ENST00000553486.5
CDS CCA 72 bp GGCATAAACTTGCACCCGACTGACCAGCCAAACATCTaGACTTTGGGGTCAGGAGCCGTTCCATTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: GINLHPTDQPNI*TLGSGAVPFLD
Trigger: GTCAAGGAATGGAACGGCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CCA 72 bp GAGGAAACACACCCCCACAGCTTGCTTCCTGCTTCCTaGAGGCTAAGTTCCACTAGGCATTACGGTCACACT +
Preference number: 6 (lower is better)
Translates to: EETHPHSLLPAS*RLSSTRHYGHT
Trigger: AGTGTGACCGTAATGCCTAGTGGAACTTAGCCTCCAGGAAGCAGGAAGCAAGCTGTGGGGGTGTGTTTCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS CCA 72 bp TCCGACCTTGGGTGTTTGACATACGCGTGTGGTATTTaGCGTGAGTCCTTGCCCCATTTACCTGCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: SDLGCLTYACGI*RESLPHLPASG
Trigger: TCCTGAGGCAGGTAAATGGGGCAAGGACTCACGCCAAATACCACACGCGTATGTCAAACACCCAAGGTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CAA 90 bp AGCCCTCACAGAGTGAGGCAAAACTCTGTTCCCAAGGGCATAAACTaGCACCCGACTGACCAGCCAAACATCTGGACTTTGGGGTCAGGA +
Preference number: 6 (lower is better)
Translates to: SPHRVRQNSVPKGIN*HPTDQPNIWTLGSG
Trigger: TCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTTGGGAACAGAGTTTTGCCTCACTCTGTGAGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS TCA 72 bp AAACTCTGTTCCCAAGGGCATAAACTTGCACCCGACTaGCCAGCCAAACATCTGGACTTTGGGGTCAGGAGC +
Preference number: 6 (lower is better)
Translates to: KLCSQGHKLAPD*PAKHLDFGVRS
Trigger: GCTCCTGACCCCAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTTGGGAACAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS TCA 72 bp GACCCCCTATGTCTCATCTCACCACTAGGGCCATACTaGTTCCTATTCCCAATGAGTGACGTGACCTTGGGC +
Preference number: 6 (lower is better)
Translates to: DPLCLISPLGPY*FLFPMSDVTLG
Trigger: GCCCAAGGTCACGTCACTCATTGGGAATAGGAATCAGTATGGCCCTAGTGGTGAGATGAGACATAGGGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CAA 90 bp CCCTCCTCATCCCCGGTTAATTCCTTCATCATGGCACATTTATCCTaGCAGACAGGAGGTAGAGAGGTGTGGGAAGGGAAGCAGACCAGT +
Preference number: 6 (lower is better)
Translates to: PSSSPVNSFIMAHLS*QTGGREVWEGKQTS
Trigger: ACTGGTCTGCTTCCCTTCCCACACCTCTCTACCTCCTGTCTGCAAGGATAAATGTGCCATGATGAAGGAATTAACCGGGGATGAGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CAA 90 bp TATCCCTTTAGTTCCCAGAAAAGGGAGGAAACACACCCCCACAGCTaGCTTCCTGCTTCCTGGAGGCTAAGTTCCACTAGGCATTACGGT +
Preference number: 6 (lower is better)
Translates to: YPFSSQKREETHPHS*LPASWRLSSTRHYG
Trigger: ACCGTAATGCCTAGTGGAACTTAGCCTCCAGGAAGCAGGAAGCAAGCTGTGGGGGTGTGTTTCCTCCCTTTTCTGGGAACTAAAGGGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS TCA 72 bp CTCCCACGCATCTTTGCACCAAAGCTAAGCTTGAGCTaGGAGGTACCCCAACCAACAAAGTGCTTGCTAGGA +
Preference number: 6 (lower is better)
Translates to: LPRIFAPKLSLS*EVPQPTKCLLG
Trigger: TCCTAGCAAGCACTTTGTTGGTTGGGGTACCTCTCAGCTCAAGCTTAGCTTTGGTGCAAAGATGCGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS TCA 72 bp GGAAGGAAAGGGGCAATGATCAGTTCTGCTAAATGCTaGATTAAACCAGAACCTGTGGCCTGGGCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: GRKGAMISSAKC*IKPEPVAWAQE
Trigger: CTCCTGGGCCCAGGCCACAGGTTCTGGTTTAATTCAGCATTTAGCAGAACTGATCATTGCCCCTTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493427.1
ENST00000493752.5
CDS CCA 72 bp GAAGGAAACAAAACCTTCAGTATCTGCAGGAACCGCTaGAGAAATTGCAGATCTAACCTGGGCCTGGCGCCA +
Preference number: 6 (lower is better)
Translates to: EGNKTFSICRNR*RNCRSNLGLAP
Trigger: TGGCGCCAGGCCCAGGTTAGATCTGCAATTTCTCCAGCGGTTCCTGCAGATACTGAAGGTTTTGTTTCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356924.9
ENST00000460308.6
ENST00000470637.1
ENST00000475240.5
ENST00000477803.5
ENST00000481935.5
ENST00000489207.1
ENST00000493752.5
ENST00000553486.5
ENST00000554453.5
ENST00000557554.5
ENST00000557588.5
CDS CCA 72 bp CAACAAAGAAGCCTTCTGCAAAAAGCCAGAGCCTCCTaGCTGGTCAAAATAGACAGGGCAAGGCTGTGCACA +
Preference number: 6 (lower is better)
Translates to: QQRSLLQKARAS*LVKIDRARLCT
Trigger: TGTGCACAGCCTTGCCCTGTCTATTTTGACCAGCCAGGAGGCTCTGGCTTTTTGCAGAAGGCTTCTTTGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CAA 72 bp TGTTTGACATACGCGTGTGGTATTTGGCGTGAGTCCTaGCCCCATTTACCTGCCTCAGGAGCTGCTATGAGT +
Preference number: 6 (lower is better)
Translates to: CLTYACGIWRES*PHLPASGAAMS
Trigger: ACTCATAGCAGCTCCTGAGGCAGGTAAATGGGGCAAGGACTCACGCCAAATACCACACGCGTATGTCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484380.2
CDS CAA 90 bp AGAAGCTCCCATTCCATCCCACGCTACGGAGACAAAGGATCAGGCTaGAACCTCAGGCACTGGCAAGAAAGCTTCTTAACAGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: RSSHSIPRYGDKGSG*NLRHWQESFLTDRR
Trigger: TCTTCTGTCTGTTAAGAAGCTTTCTTGCCAGTGCCTGAGGTTCAAGCCTGATCCTTTGTCTCCGTAGCGTGGGATGGAATGGGAGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS CAA 72 bp AGAGTGAGGCAAAACTCTGTTCCCAAGGGCATAAACTaGCACCCGACTGACCAGCCAAACATCTGGACTTTG +
Preference number: 6 (lower is better)
Translates to: RVRQNSVPKGIN*HPTDQPNIWTL
Trigger: CAAAGTCCAGATGTTTGGCTGGTCAGTCGGGTGCAAGTTTATGCCCTTGGGAACAGAGTTTTGCCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465085.2
CDS CAA 72 bp TCCCCGGTTAATTCCTTCATCATGGCACATTTATCCTaGCAGACAGGAGGTAGAGAGGTGTGGGAAGGGAAG +
Preference number: 6 (lower is better)
Translates to: SPVNSFIMAHLS*QTGGREVWEGK
Trigger: CTTCCCTTCCCACACCTCTCTACCTCCTGTCTGCAAGGATAAATGTGCCATGATGAAGGAATTAACCGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496015.5
CDS CCA 72 bp CCAAGTCTTTGTTTCCCAGGACCCCATAGTACTGACTaGGGATCAAGCCAACCTGGTAGATCACAAATTGCT +
Preference number: 6 (lower is better)
Translates to: PSLCFPGPHSTD*GSSQPGRSQIA
Trigger: AGCAATTTGTGATCTACCAGGTTGGCTTGATCCCCAGTCAGTACTATGGGGTCCTGGGAAACAAAGACTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356924.9
ENST00000469672.5
ENST00000477803.5
ENST00000493427.1
ENST00000493752.5
ENST00000553745.5
ENST00000555617.5
ENST00000556119.5
ENST00000556971.1
ENST00000557554.5
ENST00000557588.5
CDS CAA 72 bp GAACAAGAAACTTTCACATCACCTCTGCTCTTGACCTaGCCTCACAGTGCTGTGAACACTGACCCTATGGGA +
Preference number: 6 (lower is better)
Translates to: EQETFTSPLLLT*PHSAVNTDPMG
Trigger: TCCCATAGGGTCAGTGTTCACAGCACTGTGAGGCAAGGTCAAGAGCAGAGGTGATGTGAAAGTTTCTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1
CDS TCA 72 bp ACAGTCTGCCCCAGGCAGAGAGGAATATTCTACCAATaGCACTGTTTAGACTTGCTGGAGCATGATGACAGT +
Preference number: 6 (lower is better)
Translates to: TVCPRQRGIFYQ*HCLDLLEHDDS
Trigger: ACTGTCATCATGCTCCAGCAAGTCTAAACAGTGTCATTGGTAGAATATTCCTCTCTGCCTGGGGCAGACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465085.2
ENST00000484380.2
CDS TCA 72 bp CTATGTGTCAAGCACTGTACATGTGCATTACATGAATaGTATTTCATCCTCACTACACCCTTTGAGATAGGA +
Preference number: 6 (lower is better)
Translates to: LCVKHCTCALHE*YFILTTPFEIG
Trigger: TCCTATCTCAAAGGGTGTAGTGAGGATGAAATATCATTCATGTAATGCACATGTACAGTGCTTGACACATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489678.1