Pregenerated sensors for ABCD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000101986Ensembl transcript IDs: ENST00000218104.6, ENST00000370129.4, ENST00000443684.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTaGGTTGAGGACAGGGACAGGTGGGTGAGGGTATCTGTGCCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LTPGTPHILPPLSRS*VEDRDRWVRVSVPG Trigger: TCCAGGCACAGATACCCTCACCCACCTGTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CCA 90 bp | TCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTGACTTGCAGTCCTaGGCTTGTCTGAGTGGTAACAAAGGGCGTGAGGTGCGCGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SVPGEVTCSVPDLQS*ACLSGNKGREVRAG Trigger: CCCTGCGCGCACCTCACGCCCTTTGTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATGTCACTTCTCCAGGCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CCA 90 bp | ATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGGACAGGTaGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: ILPPLSRSWVEDRDR*VRVSVPGEVTCSVP Trigger: AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCACAAAGGGCGTGAGGTaGGCGCAGGGCAAAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: QGWSDEGAHSRYSAHSPTTKGVR*AQGKRQ Trigger: TTGCCTTTTGCCCTGCGCGCACCTCACGCCCTTTGT...GGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR-3UTR TCA 90 bp | GTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTCCTGGGCTTGTCTaGGTGGTAACAAAGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: VMKGLTPGTPHILPPLSRSPGLV*VVTKGV Trigger: CACGCCCTTTGTTACCACTCAGACAAGCCCAGGACT...GCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTACCTGACTTGCAGTCCTaGGCTTGTCTGAGTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: AGVMKGLTPGTPHILPPLPDLQS*ACLSGN Trigger: GTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGG...TAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR-3UTR TCA 90 bp | GTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCCTGTGCCTGGAGAAGTaGCATGTAGTGTTCCTGACT | + |
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Preference number: 2 (lower is better) Translates to: VMKGLTPGTPHILPPLSRLCLEK*HVVFLT Trigger: AGTCAGGAACACTACATGTCACTTCTCCAGGCACAG...GCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CAA 90 bp | GTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTGACTaGCAGTCCTGGGCTTGTCTGAGTGGTAACAAAGGGCGTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VRVSVPGEVTCSVPD*QSWACLSGNKGREV Trigger: CACCTCACGCCCTTTGTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR TCA 72 bp | CATGTAGTGTTCCTGACTTGCAGTCCTGGGCTTGTCTaGGTGGTAACAAAGGGCGTGAGGTGCGCGCAGGGC | + |
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Preference number: 3 (lower is better) Translates to: HVVFLTCSPGLV*VVTKGVRCAQG Trigger: GCCCTGCGCGCACCTCACGCCCTTTGTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CCA 72 bp | GGTGCAAGAGCTGTTTCAGGGCGAGGAAACCAAGGCTaGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCA | + |
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Preference number: 3 (lower is better) Translates to: GARAVSGRGNQG*SDEGAHSRYSA Trigger: TGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTGGTTTCCTCGCCCTGAAACAGCTCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CCA 72 bp | GGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTaGGTTGAGGACAGGGACAGGTGGGTGAGGGTATCT | + |
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Preference number: 3 (lower is better) Translates to: GTPHILPPLSRS*VEDRDRWVRVS Trigger: AGATACCCTCACCCACCTGTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CCA 72 bp | GGAGAAGTGACATGTAGTGTTCCTGACTTGCAGTCCTaGGCTTGTCTGAGTGGTAACAAAGGGCGTGAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GEVTCSVPDLQS*ACLSGNKGREV Trigger: CACCTCACGCCCTTTGTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATGTCACTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | GTGGTAACAAAGGGCGTGAGGTGCGCGCAGGGCAAAAGGCAACAAGGAGGGGCATGGGGACAGCCACCATaGGCAGGCCCGAGGCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VVTKGVRCAQGKRQQGGAWGQPP*AGPRRS Trigger: GGAGCGCCTCGGGCCTGCTCATGGTGGCTGTCCCCA...TGCCCCTCCTTGTTGCCTTTTGCCCTGCGCGCACCTCACGCCCTTTGTTACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CGCAGTTGGGTTGAGGACAGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAACCACGAGGCCGGCGATaGCCGAGGGCCAGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: RSWVEDRDRWVRVSVPGEPRGRR*PRARLC Trigger: GCACAGCCTGGCCCTCGGCCATCGCCGGCCTCGTGG...TTCTCCAGGCACAGATACCCTCACCCACCTGTCCCTGTCCTCAACCCAACTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CAAGGCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCCAGCACCCAGCGGTATaGGGGACAGGCCCCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QGWSDEGAHSRYSAHSPTQHPAV*GTGPWP Trigger: AGGCCAGGGGCCTGTCCCCCATACCGCTGGGTGCTG...GGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGCCCCGGCAGCAGAAGTaGGCGGCGGGCTGGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGTPHILPPLSRSWVEDRPRQQK*AAGWLS Trigger: ACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGG...CCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCCCAGCTCCCCGAACTTaGGCGAGAAGGCCCGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VMKGLTPGTPHILPPLSRPAPRT*ARRPAA Trigger: TGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGG...GCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGGACTGGGGGACAGGCCCCTaGCCTGGATCCTCTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTPHILPPLSRSWVEDRDWGTGP*PGSSWS Trigger: GCTCCAAGAGGATCCAGGCCAGGGGCCTGTCCCCCA...GTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGGACGCGGGCTGGCTGAGTTaGGCCCTCGTGAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GTPHILPPLSRSWVEDRDAGWLS*ALVSSA Trigger: TGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGC...GTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTGCAGCAGGGCCTCGGTaGCCCCGGCAGCAGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: RDRWVRVSVPGEVTCSVPAAGPR*PRQQKW Trigger: CCACTTCTGCTGCCGGGGCCACCGAGGCCCTGCTGC...AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR GCA 90 bp | CTTAGGGTGCAAGAGCTGTTTCAGGGCGAGGAAACCAAGGCTGGAGTGATGAAGCCGCCGCGCCTCCTCTaGCACCAGCTCCCCGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LRVQELFQGEETKAGVMKPPRLL*HQLPEL Trigger: AAGTTCGGGGAGCTGGTGGCAGAGGAGGCGCGGCGG...CTTCATCACTCCAGCCTTGGTTTCCTCGCCCTGAAACAGCTCTTGCACCCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTAAGTGGGCGGCGGGCTaGCTGAGTTGGGCCCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RDRWVRVSVPGEVTCSVPKWAAG*LSWALV Trigger: CACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTT...AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | CCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGACAGGGACAGGTGGGTaGGGGTATCTGTGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGTPHILPPLSRSWVEDRTGTGG*GYLCLE Trigger: CTCCAGGCACAGATACCCTCACCCACCTGTCCCTGT...CCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGGACTCCTCCGTCAGAGACTaGTCAGGGTTGCGAAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GTPHILPPLSRSWVEDRDSSVRD*SGLRSR Trigger: GCGGCTTCGCAACCCTGACCAGTCTCTGACGGAGGA...GTCCCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTGACAGGCCCCTGGCCTaGATCCTCTTGGAGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RDRWVRVSVPGEVTCSVPDRPLA*ILLEPW Trigger: CCAGGGCTCCAAGAGGATCCAGGCCAGGGGCCTGTC...AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GTGGTAACAAAGGGCGTGAGGTGCGCGCAGGGCAAAAGGCAACAAGGAGGGGCACCTCTAAGTCGCAGTTaGGTTGAGGACAGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: VVTKGVRCAQGKRQQGGAPLSRS*VEDRDR Trigger: CCTGTCCCTGTCCTCAACCCAACTGCGACTTAGAGG...TGCCCCTCCTTGTTGCCTTTTGCCCTGCGCGCACCTCACGCCCTTTGTTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR GCA 90 bp | TGGGTTGAGGACAGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACAACAAAGGGCGTGAGGTaGGCGCAGGGCAAAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: WVEDRDRWVRVSVPGEVTTKGVR*AQGKRQ Trigger: TTGCCTTTTGCCCTGCGCGCACCTCACGCCCTTTGT...TGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCTGTCCTCAACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGGAGGACAGGGACAGGTaGGTGAGGGTATCTGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PGTPHILPPLSRSWVEDREDRDR*VRVSVP Trigger: AGGCACAGATACCCTCACCCACCTGTCCCTGTCCTC...CCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CTTAGGGTGCAAGAGCTGTTTCAGGGCGAGGAAACCAAGGCTGGAGTGATGAAGCGATCTCCTCCGAGTTaGCCACCACACGCGAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRVQELFQGEETKAGVMKRSPPS*PPHASA Trigger: TGCACTCGCGTGTGGTGGCCAACTCGGAGGAGATCG...CTTCATCACTCCAGCCTTGGTTTCCTCGCCCTGAAACAGCTCTTGCACCCTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | TGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGAGTCCTGGGCTTGTCTaGGTGGTAACAAAGGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: WSDEGAHSRYSAHSPTSKSPGLV*VVTKGV Trigger: CACGCCCTTTGTTACCACTCAGACAAGCCCAGGACT...CTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | CGCAGTTGGGTTGAGGACAGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAACTGTGCCTGGAGAAGTaGCATGTAGTGTTCCTGACT | + |
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Preference number: 4 (lower is better) Translates to: RSWVEDRDRWVRVSVPGELCLEK*HVVFLT Trigger: AGTCAGGAACACTACATGTCACTTCTCCAGGCACAG...TTCTCCAGGCACAGATACCCTCACCCACCTGTCCCTGTCCTCAACCCAACTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | CTTAGGGTGCAAGAGCTGTTTCAGGGCGAGGAAACCAAGGCTGGAGTGATGAAGAAGTCGCAGTTGGGTTaGGGACAGGGACAGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LRVQELFQGEETKAGVMKKSQLG*GQGQVG Trigger: ACCCACCTGTCCCTGTCCTCAACCCAACTGCGACTT...CTTCATCACTCCAGCCTTGGTTTCCTCGCCCTGAAACAGCTCTTGCACCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | GAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGCCTGACTTGCAGTCCTaGGCTTGTCTGAGTGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: EGAHSRYSAHSPTSKSQLPDLQS*ACLSGN Trigger: GTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGG...CAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTCGTCCAGGAGTGGCTTaGTCAGGTTGGAGTAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RDRWVRVSVPGEVTCSVPRPGVA*SGWSRG Trigger: ACCTCTACTCCAACCTGACCAAGCCACTCCTGGACG...AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | CTTAGGGTGCAAGAGCTGTTTCAGGGCGAGGAAACCAAGGCTGGAGTGATGAAGAGCCACGTCCAGGAGTaGCTTGGTCAGGTTGGAGTA | + |
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Preference number: 4 (lower is better) Translates to: LRVQELFQGEETKAGVMKSHVQE*LGQVGV Trigger: TACTCCAACCTGACCAAGCCACTCCTGGACGTGGCT...CTTCATCACTCCAGCCTTGGTTTCCTCGCCCTGAAACAGCTCTTGCACCCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CCA 90 bp | AGGGACAGGTGGGTGAGGGTATCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTCGAGGAAACCAAGGCTaGAGTGATGAAGGGGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RDRWVRVSVPGEVTCSVPRGNQG*SDEGAH Trigger: GTGAGCCCCTTCATCACTCCAGCCTTGGTTTCCTCG...AGGAACACTACATGTCACTTCTCCAGGCACAGATACCCTCACCCACCTGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR TCA 90 bp | GAAGTGACATGTAGTGTTCCTGACTTGCAGTCCTGGGCTTGTCTGAGTGGTAACGGCGAGCTCAACCTCTaGAAGCATCAAGGCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: EVTCSVPDLQSWACLSGNGELNL*KHQGWQ Trigger: CTGCCAGCCTTGATGCTTTCAGAGGTTGAGCTCGCC...GTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATGTCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTATACTTCATGAGGAACTaGTCCAGCATAACATACCAC | + |
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Preference number: 4 (lower is better) Translates to: AGVMKGLTPGTPHILPPLYFMRN*SSITYH Trigger: GTGGTATGTTATGCTGGAGCAGTTCCTCATGAAGTA...TAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| 3UTR CAA 72 bp | TCTGTGCCTGGAGAAGTGACATGTAGTGTTCCTGACTaGCAGTCCTGGGCTTGTCTGAGTGGTAACAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: SVPGEVTCSVPD*QSWACLSGNKG Trigger: CCCTTTGTTACCACTCAGACAAGCCCAGGACTGCAAGTCAGGAACACTACATGTCACTTCTCCAGGCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CCA 90 bp | GCACGGCCGTGCGCTTCAGCGTGTTCCCCCGCCAGGGCCGGGGCCTaGAGAGCACCGGCATGTCACCTGGGCTGGCTGCCGCGTAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: ARPCASACSPARAGA*RAPACHLGWLPRRD Trigger: GTCCCTACGCGGCAGCCAGCCCAGGTGACATGCCGGTGCTCTCCAGGCCCCGGCCCTGGCGGGGGAACACGCTGAAGCGCACGGCCGTGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 90 bp | GGAGCCACAGGAGCCGCTGCAGGAATACCCGGTTCATGCCAGCTTTaGCCGCCGCGACCCCGGAGGCCTCCTGCGTGGGCTCCCCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: GATGAAAGIPGSCQL*PPRPRRPPAWAPRR Trigger: CCGCCGGGGAGCCCACGCAGGAGGCCTCCGGGGTCGCGGCGGCCAAAGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCCTGTGGCTCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 90 bp | CCTCGGTGGCCCCGGCAGCAGAAGTGGGCGGCGGGCTGGCTGAGTTaGGCCCTCGTGAGCTCAGCACCCAGCGGTATGGGGGACAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: PRWPRQQKWAAGWLS*ALVSSAPSGMGDRP Trigger: GGGCCTGTCCCCCATACCGCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CCA 90 bp | GCAGCAGGGCCTCGGTGGCCCCGGCAGCAGAAGTGGGCGGCGGGCTaGCTGAGTTGGGCCCTCGTGAGCTCAGCACCCAGCGGTATGGGG | + |
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Preference number: 5 (lower is better) Translates to: AAGPRWPRQQKWAAG*LSWALVSSAPSGMG Trigger: CCCCATACCGCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGGCCCTGCTGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CCA 90 bp | GCATCAAGGCTGGCAGCAGGGCCTCGGTGGCCCCGGCAGCAGAAGTaGGCGGCGGGCTGGCTGAGTTGGGCCCTCGTGAGCTCAGCACCC | + |
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Preference number: 5 (lower is better) Translates to: ASRLAAGPRWPRQQK*AAGWLSWALVSSAP Trigger: GGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGGCCCTGCTGCCAGCCTTGATGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS GCA 90 bp | AGACTTTGTGGGCTCCATAGGCCGCGAGGGCCAGGAGCACGGCCGTaGGCTTCAGCGTGTTCCCCCGCCAGGGCCGGGGCCTGGAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: RLCGLHRPRGPGARP*ASACSPARAGAWRA Trigger: TGCTCTCCAGGCCCCGGCCCTGGCGGGGGAACACGCTGAAGCGCACGGCCGTGCTCCTGGCCCTCGCGGCCTATGGAGCCCACAAAGTCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 90 bp | GCCACATACACCGACAGGAAGGTGCGGCTCACCAAGGCGGCCGAGTaGAGGGCCAGCAGCCCCGTCTCCCGGCACAGGACCCGGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: ATYTDRKVRLTKAAE*RASSPVSRHRTRGN Trigger: GTTCCCCCGGGTCCTGTGCCGGGAGACGGGGCTGCTGGCCCTGCACTCGGCCGCCTTGGTGAGCCGCACCTTCCTGTCGGTGTATGTGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 90 bp | GGGCCAGCCTTCCGTCCAGGCGGGCCACATACACCGACAGGAAGGTaGGGCTCACCAAGGCGGCCGAGTGCAGGGCCAGCAGCCCCGTCT | + |
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Preference number: 5 (lower is better) Translates to: GPAFRPGGPHTPTGR*GSPRRPSAGPAAPS Trigger: AGACGGGGCTGCTGGCCCTGCACTCGGCCGCCTTGGTGAGCCGCACCTTCCTGTCGGTGTATGTGGCCCGCCTGGACGGAAGGCTGGCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 90 bp | ACGCGAGTGCATGTAGCGCAGCTCCCCCTTCCGCCGCGCCTCCTCTaGCACCAGCTCCCCGAACTTGGGCGAGAAGGCCCGCAGCACGTT | + |
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Preference number: 5 (lower is better) Translates to: TRVHVAQLPLPPRLL*HQLPELGREGPQHV Trigger: AACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGTGGCAGAGGAGGCGCGGCGGAAGGGGGAGCTGCGCTACATGCACTCGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CCA 90 bp | CCCTCCAGGGTCGCGGCCTCTTCGGGCAGCCCAAGTGGAGGAACTTaGCTCTCCTGTCCTGTCAGTGCCCTGGCCCCTGAGGTCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: PSRVAASSGSPSGGT*LSCPVSALAPEVRA Trigger: GGCCCTGACCTCAGGGGCCAGGGCACTGACAGGACAGGAGAGCCAAGTTCCTCCACTTGGGCTGCCCGAAGAGGCCGCGACCCTGGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 90 bp | TGGAGAGCACCGGCATGTCACCTGGGCTGGCTGCCGCGTAGGGACTaGGGCTGGTGCCTGGGGCAGCAGTTGAGGCAGGTGGCTGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: WRAPACHLGWLPRRD*GWCLGQQLRQVAGR Trigger: CCTTCCAGCCACCTGCCTCAACTGCTGCCCCAGGCACCAGCCCCAGTCCCTACGCGGCAGCCAGCCCAGGTGACATGCCGGTGCTCTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 90 bp | ACTGCAGCAGCTGCCAGCCAAAAGCCCGCGGGTCCTTGCGGACGATaGAGCGGGCCAGCCTTCCGTCCAGGCGGGCCACATACACCGACA | + |
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Preference number: 5 (lower is better) Translates to: TAAAASQKPAGPCGR*SGPAFRPGGPHTPT Trigger: TGTCGGTGTATGTGGCCCGCCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGGACCCGCGGGCTTTTGGCTGGCAGCTGCTGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 90 bp | CTCGGATCTTCAGGGGGCCCTCCACACGGACACCAGACCGGCCTATaGTCCCAGACCCCGCCTGAGCGTCCTCTAGCTCCCTGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LGSSGGPPHGHQTGL*SQTPPERPLAPWAS Trigger: AGAGGCCCAGGGAGCTAGAGGACGCTCAGGCGGGGTCTGGGACCATAGGCCGGTCTGGTGTCCGTGTGGAGGGCCCCCTGAAGATCCGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS TCA 90 bp | GGCTCTCCTGTCCTGTCAGTGCCCTGGCCCCTGAGGTCAGGGCCTTaGGAGGTCTCGGGCAGAGGGGGCGTCTCTTCCTCTCCACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GSPVLSVPWPLRSGP*EVSGRGGVSSSPPS Trigger: AGAAGGTGGAGAGGAAGAGACGCCCCCTCTGCCCGAGACCTCTCAAGGCCCTGACCTCAGGGGCCAGGGCACTGACAGGACAGGAGAGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 90 bp | TCTGCTGGGAGAAGTAGAGGCGGTAGGCGTGGGCCACCAGACGGCTaGGGAACGACAGGGCCAGTTGGCCCTCCAGGTAACGGATGGCAC | + |
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Preference number: 5 (lower is better) Translates to: SAGRSRGGRRGPPDG*GTTGPVGPPGNGWH Trigger: GTGCCATCCGTTACCTGGAGGGCCAACTGGCCCTGTCGTTCCGCAGCCGTCTGGTGGCCCACGCCTACCGCCTCTACTTCTCCCAGCAGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 90 bp | CCAGCTCCACCTCATGGCCCCCATAGAAGGCGATCTCCTCCGAGTTaGCCACCACACGCGAGTGCATGTAGCGCAGCTCCCCCTTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: PAPPHGPHRRRSPPS*PPHASACSAAPPSA Trigger: GGCGGAAGGGGGAGCTGCGCTACATGCACTCGCGTGTGGTGGCCAACTCGGAGGAGATCGCCTTCTATGGGGGCCATGAGGTGGAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CCA 90 bp | CACAGACATGTAGGGCCTCTGCGGGATGTAGAACATGCGCTGGGGTaGGGGCTTGTAGAGCACACCACCGTACGTGGGCCAGAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: HRHVGPLRDVEHALG*GLVEHTTVRGPEPT Trigger: GGTGGGCTCTGGCCCACGTACGGTGGTGTGCTCTACAAGCCCCCACCCCAGCGCATGTTCTACATCCCGCAGAGGCCCTACATGTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS-3UTR CAA 90 bp | CAAGGCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCACCAGCTCCCCGAACTaGGGCGAGAAGGCCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: QGWSDEGAHSRYSAHSPTTSSPN*GEKARS Trigger: GCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGT...GGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CCA 90 bp | GGGTGTAGGAAGTCACAGCCACGTCCAGGAGTGGCTTGGTCAGGTTaGAGTAGAGGTGGGCCACAGAGGCCGCAAAGGCCACCACGTCCT | + |
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Preference number: 5 (lower is better) Translates to: GCRKSQPRPGVAWSG*SRGGPQRPQRPPRP Trigger: AGGACGTGGTGGCCTTTGCGGCCTCTGTGGCCCACCTCTACTCCAACCTGACCAAGCCACTCCTGGACGTGGCTGTGACTTCCTACACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGGCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCAAGGCCCGCAGCACGTaGGCCGTGAGGAACACCACG | + |
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Preference number: 5 (lower is better) Translates to: NQGWSDEGAHSRYSAHSPKARST*AVRNTT Trigger: CGTGGTGTTCCTCACGGCCAACGTGCTGCGGGCCTT...GGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCACCTCTAGCGATCTCCTCCGAGTaGGCCACCACACGCGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: AGVMKGLTPGTPHILPPLAISSE*ATTREC Trigger: GCACTCGCGTGTGGTGGCCAACTCGGAGGAGATCGC...TAGAGGTGGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CAA 90 bp | CCAGGTACTCCGCACATTCTCCCACCTCTAAGTCGCAGTTGGGTTGAGGACAGGAGAGACTGGTCAGGGTaGCGAAGCCGCCCGTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PGTPHILPPLSRSWVEDRRDWSG*RSRPSM Trigger: CATGGACGGGCGGCTTCGCAACCCTGACCAGTCTCT...CCTGTCCTCAACCCAACTGCGACTTAGAGGTGGGAGAATGTGCGGAGTACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS-3UTR CAA 90 bp | AACCAAGGCTGGAGTGATGAAGGGGCTCACTCCAGGTACTCCGCACATTCTCCCTCCAGAAGGATGAGGTaGATCTGCGAGGCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQGWSDEGAHSRYSAHSPSRRMR*ICEARS Trigger: GGACCTGGCCTCGCAGATCAACCTCATCCTTCTGGA...GGGAGAATGTGCGGAGTACCTGGAGTGAGCCCCTTCATCACTCCAGCCTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS TCA 90 bp | TGGTCCCAGACCCCGCCTGAGCGTCCTCTAGCTCCCTGGGCCTCTTaGAGTGACAGCGCTGAACATCTTCAAATACCTGGAACATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WSQTPPERPLAPWAS*SDSAEHLQIPGTSR Trigger: ACGAGATGTTCCAGGTATTTGAAGATGTTCAGCGCTGTCACTTCAAGAGGCCCAGGGAGCTAGAGGACGCTCAGGCGGGGTCTGGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS GCA 72 bp | GGGCTCCATAGGCCGCGAGGGCCAGGAGCACGGCCGTaGGCTTCAGCGTGTTCCCCCGCCAGGGCCGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GLHRPRGPGARP*ASACSPARAGA Trigger: GGCCCCGGCCCTGGCGGGGGAACACGCTGAAGCGCACGGCCGTGCTCCTGGCCCTCGCGGCCTATGGAGCCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | GCCGGGGCCTGGAGAGCACCGGCATGTCACCTGGGCTaGCTGCCGCGTAGGGACTGGGGCTGGTGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGAWRAPACHLG*LPRRDWGWCLG Trigger: CCCCAGGCACCAGCCCCAGTCCCTACGCGGCAGCCAGCCCAGGTGACATGCCGGTGCTCTCCAGGCCCCGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | CTGGCAGCAGGGCCTCGGTGGCCCCGGCAGCAGAAGTaGGCGGCGGGCTGGCTGAGTTGGGCCCTCGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAAGPRWPRQQK*AAGWLSWALVS Trigger: GCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGGCCCTGCTGCCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CCA 72 bp | TGCGCTTCAGCGTGTTCCCCCGCCAGGGCCGGGGCCTaGAGAGCACCGGCATGTCACCTGGGCTGGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: CASACSPARAGA*RAPACHLGWLP Trigger: CGGCAGCCAGCCCAGGTGACATGCCGGTGCTCTCCAGGCCCCGGCCCTGGCGGGGGAACACGCTGAAGCGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | CCTCGGTGGCCCCGGCAGCAGAAGTGGGCGGCGGGCTaGCTGAGTTGGGCCCTCGTGAGCTCAGCACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRWPRQQKWAAG*LSWALVSSAPS Trigger: GCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CAA 90 bp | GCCTCGGTGGCCCCGGCAGCAGAAGTGGGCGGCGGGCTGGCTGAGTaGGGCCCTCGTGAGCTCAGCACCCAGCGGTATGGGGGACAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASVAPAAEVGGGLAE*GPRELSTQRYGGQA Trigger: GGCCTGTCCCCCATACCGCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGCCACCGAGGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CAA 90 bp | AGGAGCCACAGGAGCCGCTGCAGGAATACCCGGTTCATGCCAGCTTaGGCCGCCGCGACCCCGGAGGCCTCCTGCGTGGGCTCCCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSHRSRCRNTRFMPA*AAATPEASCVGSPA Trigger: CGCCGGGGAGCCCACGCAGGAGGCCTCCGGGGTCGCGGCGGCCAAAGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCCTGTGGCTCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | CCCCGGCAGCAGAAGTGGGCGGCGGGCTGGCTGAGTTaGGCCCTCGTGAGCTCAGCACCCAGCGGTATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PRQQKWAAGWLS*ALVSSAPSGMG Trigger: CCCCATACCGCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS CAA 72 bp | GCCCCGGCAGCAGAAGTGGGCGGCGGGCTGGCTGAGTaGGGCCCTCGTGAGCTCAGCACCCAGCGGTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: APAAEVGGGLAE*GPRELSTQRYG Trigger: CCCATACCGCTGGGTGCTGAGCTCACGAGGGCCCAACTCAGCCAGCCCGCCGCCCACTTCTGCTGCCGGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370129.4 |
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| CDS GCA 72 bp | GCTGCCAGCCAAAAGCCCGCGGGTCCTTGCGGACGATaGAGCGGGCCAGCCTTCCGTCCAGGCGGGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: AASQKPAGPCGR*SGPAFRPGGPH Trigger: ATGTGGCCCGCCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGGACCCGCGGGCTTTTGGCTGGCAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CAA 72 bp | TTCCGCCGCGCCTCCTCTGCCACCAGCTCCCCGAACTaGGGCGAGAAGGCCCGCAGCACGTTGGCCGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRRASSATSSPN*GEKARSTLAVR Trigger: CCTCACGGCCAACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGTGGCAGAGGAGGCGCGGCGGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CAA 90 bp | TCTGCCACCAGCTCCCCGAACTTGGGCGAGAAGGCCCGCAGCACGTaGGCCGTGAGGAACACCACGAGGCCGGCGATGGCCGAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SATSSPNLGEKARST*AVRNTTRPAMAEGQ Trigger: CTGGCCCTCGGCCATCGCCGGCCTCGTGGTGTTCCTCACGGCCAACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGTGGCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CAA 90 bp | AGCTCCCCCTTCCGCCGCGCCTCCTCTGCCACCAGCTCCCCGAACTaGGGCGAGAAGGCCCGCAGCACGTTGGCCGTGAGGAACACCACG | + |
|
Preference number: 6 (lower is better) Translates to: SSPFRRASSATSSPN*GEKARSTLAVRNTT Trigger: CGTGGTGTTCCTCACGGCCAACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCTGGTGGCAGAGGAGGCGCGGCGGAAGGGGGAGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CAA 90 bp | ATGAGGAGCCACTGCAGCAGCTGCCAGCCAAAAGCCCGCGGGTCCTaGCGGACGATGCAGCGGGCCAGCCTTCCGTCCAGGCGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: MRSHCSSCQPKARGS*RTMQRASLPSRRAT Trigger: TGTGGCCCGCCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGGACCCGCGGGCTTTTGGCTGGCAGCTGCTGCAGTGGCTCCTCAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 72 bp | GGAGCCACAGGAGCCGCTGCAGGAATACCCGGTTCATaGCAGCTTTGGCCGCCGCGACCCCGGAGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GATGAAAGIPGS*QLWPPRPRRPP Trigger: AGGAGGCCTCCGGGGTCGCGGCGGCCAAAGCTGGCATGAACCGGGTATTCCTGCAGCGGCTCCTGTGGCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 72 bp | ACTGCAGCAGCTGCCAGCCAAAAGCCCGCGGGTCCTTaGGGACGATGCAGCGGGCCAGCCTTCCGTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TAAAASQKPAGP*GRCSGPAFRPG Trigger: GCCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGGACCCGCGGGCTTTTGGCTGGCAGCTGCTGCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | TCAGGGGGCCCTCCACACGGACACCAGACCGGCCTATaGTCCCAGACCCCGCCTGAGCGTCCTCTAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SGGPPHGHQTGL*SQTPPERPLAP Trigger: GGGAGCTAGAGGACGCTCAGGCGGGGTCTGGGACCATAGGCCGGTCTGGTGTCCGTGTGGAGGGCCCCCTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS CAA 72 bp | CACTGCAGCAGCTGCCAGCCAAAAGCCCGCGGGTCCTaGCGGACGATGCAGCGGGCCAGCCTTCCGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HCSSCQPKARGS*RTMQRASLPSR Trigger: CCTGGACGGAAGGCTGGCCCGCTGCATCGTCCGCAAGGACCCGCGGGCTTTTGGCTGGCAGCTGCTGCAGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CAA 72 bp | AGCTCCCCGAACTTGGGCGAGAAGGCCCGCAGCACGTaGGCCGTGAGGAACACCACGAGGCCGGCGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPNLGEKARST*AVRNTTRPAMA Trigger: GGCCATCGCCGGCCTCGTGGTGTTCCTCACGGCCAACGTGCTGCGGGCCTTCTCGCCCAAGTTCGGGGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CCA 72 bp | GCCCTCCAGGGTCGCGGCCTCTTCGGGCAGCCCAAGTaGAGGAACTTGGCTCTCCTGTCCTGTCAGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALQGRGLFGQPK*RNLALLSCQCP Trigger: AGGGCACTGACAGGACAGGAGAGCCAAGTTCCTCCACTTGGGCTGCCCGAAGAGGCCGCGACCCTGGAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | GAGGCCGCAAAGGCCACCACGTCCTCCGTCAGAGACTaGTCAGGGTTGCGAAGCCGCCCGTCCATGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EAAKATTSSVRD*SGLRSRPSMLL Trigger: CAGCAACATGGACGGGCGGCTTCGCAACCCTGACCAGTCTCTGACGGAGGACGTGGTGGCCTTTGCGGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS CCA 72 bp | CCTCATGGCCCCCATAGAAGGCGATCTCCTCCGAGTTaGCCACCACACGCGAGTGCATGTAGCGCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PHGPHRRRSPPS*PPHASACSAAP Trigger: GGGAGCTGCGCTACATGCACTCGCGTGTGGTGGCCAACTCGGAGGAGATCGCCTTCTATGGGGGCCATGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS CCA 72 bp | GTAGGGCCTCTGCGGGATGTAGAACATGCGCTGGGGTaGGGGCTTGTAGAGCACACCACCGTACGTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VGPLRDVEHALG*GLVEHTTVRGP Trigger: TGGCCCACGTACGGTGGTGTGCTCTACAAGCCCCCACCCCAGCGCATGTTCTACATCCCGCAGAGGCCCTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS CAA 72 bp | GTGGGCCACCAGACGGCTGCGGAACGACAGGGCCAGTaGGCCCTCCAGGTAACGGATGGCACTGTTGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGHQTAAERQGQ*ALQVTDGTVDE Trigger: TTCGTCAACAGTGCCATCCGTTACCTGGAGGGCCAACTGGCCCTGTCGTTCCGCAGCCGTCTGGTGGCCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218104.6 |
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| CDS GCA 72 bp | CCACAGACATGTAGGGCCTCTGCGGGATGTAGAACATaGGCTGGGGTGGGGGCTTGTAGAGCACACCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: PQTCRASAGCRT*AGVGACRAHHR Trigger: ACGGTGGTGTGCTCTACAAGCCCCCACCCCAGCGCATGTTCTACATCCCGCAGAGGCCCTACATGTCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS TCA 72 bp | AGCCAGCCAGCTCCGTCACCTCCTTGTACGACGACATaGTCCGCTCAATGGCATCTGCAGCCGCTGTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SQPAPSPPCTTT*SAQWHLQPLSG Trigger: TCCTGACAGCGGCTGCAGATGCCATTGAGCGGATCATGTCGTCGTACAAGGAGGTGACGGAGCTGGCTGGCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS TCA 72 bp | CACCCTGATGTTGAGGCTGGCCACCACCACCTCTCCTaGGGGCGTGACGATGGGGATGTTCTCGCAGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPDVEAGHHHLS*GRDDGDVLADD Trigger: ATCATCTGCGAGAACATCCCCATCGTCACGCCCTCAGGAGAGGTGGTGGTGGCCAGCCTCAACATCAGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS CAA 72 bp | ATCCGCTCAATGGCATCTGCAGCCGCTGTCAGGAGGTaGCGGGCAATAGTGAAGGCTTCTGTGCGCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRSMASAAAVRR*RAIVKASVRSL Trigger: GAGCGAGCGCACAGAAGCCTTCACTATTGCCCGCAACCTCCTGACAGCGGCTGCAGATGCCATTGAGCGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS GCA 72 bp | CTCGCTCACCAGCTCCTCCTCCTTCTTTTCCAAGGCTaGCTTCTTCACGGCCTCTGCATCAGTGCTAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAHQLLLLLFQG*LLHGLCISASH Trigger: GTGGCTAGCACTGATGCAGAGGCCGTGAAGAAGGCAGCCTTGGAAAAGAAGGAGGAGGAGCTGGTGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443684.2 |
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| CDS CCA 72 bp | AAGCAGGGTGTAGGAAGTCACAGCCACGTCCAGGAGTaGCTTGGTCAGGTTGGAGTAGAGGTGGGCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: KQGVGSHSHVQE*LGQVGVEVGHR Trigger: TCTGTGGCCCACCTCTACTCCAACCTGACCAAGCCACTCCTGGACGTGGCTGTGACTTCCTACACCCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000370129.4 |
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| CDS TCA 72 bp | ACCCCGCCTGAGCGTCCTCTAGCTCCCTGGGCCTCTTaGAGTGACAGCGCTGAACATCTTCAAATACCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPPERPLAPWAS*SDSAEHLQIPG Trigger: TCCAGGTATTTGAAGATGTTCAGCGCTGTCACTTCAAGAGGCCCAGGGAGCTAGAGGACGCTCAGGCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS GCA 72 bp | CTCCTTGTACGACGACATGATCCGCTCAATGGCATCTaGAGCCGCTGTCAGGAGGTTGCGGGCAATAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLVRRHDPLNGI*SRCQEVAGNSE Trigger: TTCACTATTGCCCGCAACCTCCTGACAGCGGCTGCAGATGCCATTGAGCGGATCATGTCGTCGTACAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000218104.6 ENST00000443684.2 |
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| CDS GCA 72 bp | CTCCTTCTTTTCCAAGGCTGCCTTCTTCACGGCCTCTaGATCAGTGCTAGCCACGATGAAAAGGTGGAACCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLFQGCLLHGL*ISASHDEKVEP Trigger: GGGTTCCACCTTTTCATCGTGGCTAGCACTGATGCAGAGGCCGTGAAGAAGGCAGCCTTGGAAAAGAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443684.2 |
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