RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000114770

Ensembl transcript IDs: ENST00000265586.10, ENST00000334444.11, ENST00000382494.6, ENST00000392579.6, ENST00000427120.6, ENST00000437205.5, ENST00000437341.5, ENST00000438979.6, ENST00000443376.5, ENST00000443497.1, ENST00000446941.2, ENST00000476402.1, ENST00000492216.1

Found 1376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCTGGAGCGGCCGTaGGGAGGCGGCAGAGGGGGCTGTCGGAGGGCCCACTATTGCCAC +
Preference number: 1 (lower is better)
Translates to: GLQPPTRLQPPLERP*GGGRGGCRRAHYCH
Trigger: GTGGCAATAGTGGGCCCTCCGACAGCCCCCTCTGCCGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGACGGGTGGGCGGCTGGAGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 90 bp ACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCTGGAGCGGCC +
Preference number: 1 (lower is better)
Translates to: TRTEGRSPENSRRSA*SPAAHPSPATPGAA
Trigger: GGCCGCTCCAGGGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 90 bp ACTGGGCCGCTCGTCACTGTCCAGGAGGAGGTGGCCTTTCTGCTCTaGCAGCACCGCCTGATGCTCAGTGCGCTGCAGCTGCCTCACCTT +
Preference number: 1 (lower is better)
Translates to: TGPLVTVQEEVAFLL*QHRLMLSALQLPHL
Trigger: AAGGTGAGGCAGCTGCAGCGCACTGAGCATCAGGCGGTGCTGGCAGAGCAGAAAGGCCACCTCCTCCTGGACAGTGACGAGCGGCCCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp GCAGGTGGCCCAGGTGGATGTGCTTGCCTTCTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCAGGAGGAGGTGGCCTTTCTGCTCTG +
Preference number: 1 (lower is better)
Translates to: AGGPGGCACLLPLRD*AARHCPGGGGLSAL
Trigger: CAGAGCAGAAAGGCCACCTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp ATGCTGTGCAGTGTCCTCTGTAAGCGCAGGTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCACTGTCC +
Preference number: 1 (lower is better)
Translates to: MLCSVLCKRRWPRWM*LPSSSSGLGRSSLS
Trigger: GGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGACACTGCACAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp GCCAAACATGTGATAACTGCCTCCAGGCACTTGGTATGTTCCCGGTaGTGGCTCACCAGCCCGGGCCACACAACGTGCTCTCACCCACTC +
Preference number: 1 (lower is better)
Translates to: AKHVITASRHLVCSR*WLTSPGHTTCSHPL
Trigger: GAGTGGGTGAGAGCACGTTGTGTGGCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAGTTATCACATGTTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 90 bp AGATCGATGCTGTGCAGTGTCCTCTGTAAGCGCAGGTGGCCCAGGTaGATGTGCTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCA +
Preference number: 1 (lower is better)
Translates to: RSMLCSVLCKRRWPR*MCLPSSSSGLGRSS
Trigger: TGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGACACTGCACAGCATCGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 90 bp GCAACGCTGACCATTCAATTGATGACAGCAGTGACCACGCCCACCTaGGCTACCAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACAC +
Preference number: 1 (lower is better)
Translates to: ATLTIQLMTAVTTPT*ATSPTAQRGFAGTH
Trigger: GTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTGGTAGCTCAGGTGGGCGTGGTCACTGCTGTCATCAATTGAATGGTCAGCGTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 90 bp CAGAGGGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGCACCGTGAAACCACCAGCTAGAGAA +
Preference number: 1 (lower is better)
Translates to: QRGLSEGPLLPHVFL*TPRKPGTVKPPARE
Trigger: TTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR TCA 90 bp CCCCCTTTTCCTCACGTGAAGCAACTCAGTAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACCTCGGCACTGATGGAGCAGTCTCCA +
Preference number: 1 (lower is better)
Translates to: PPFPHVKQLSKMAVQ*SLFPHTSALMEQSP
Trigger: TGGAGACTGCTCCATCAGTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 90 bp TTCCCACACACCTCGGCACTGATGGAGCAGTCTCCAAAGGAAGGCTaGAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCCTTCCCATAC +
Preference number: 1 (lower is better)
Translates to: FPHTSALMEQSPKEG*KDSRWLPWAPSFPY
Trigger: GTATGGGAAGGAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp GTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGT +
Preference number: 1 (lower is better)
Translates to: VRWRCSEACSHTPRH*WSSLQRKAERTAGG
Trigger: ACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp CACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATTaGGAGCTCCCCCTTCTTGTGGGCCACACGGGCCAGAGAAGAAAG +
Preference number: 1 (lower is better)
Translates to: HVRRLVLGQRPHVFH*ELPLLVGHTGQRRK
Trigger: CTTTCTTCTCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 90 bp GCAAGGCCCTGTATGCTGGACGTGATGTGGGAGAGGAAAGGTGACTaGGTGATATTGTCCAGACGCTTCAGCTCCCGAATCAGGACCCTG +
Preference number: 1 (lower is better)
Translates to: ARPCMLDVMWERKGD*VILSRRFSSRIRTL
Trigger: CAGGGTCCTGATTCGGGAGCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTCCAGCATACAGGGCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp AAACATGTGATAACTGCCTCCAGGCACTTGGTATGTTCCCGGTGCTaGCTCACCAGCCCGGGCCACACAACGTGCTCTCACCCACTCATA +
Preference number: 1 (lower is better)
Translates to: KHVITASRHLVCSRC*LTSPGHTTCSHPLI
Trigger: TATGAGTGGGTGAGAGCACGTTGTGTGGCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAGTTATCACATGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp GTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGGAAGGCTGAACTCTTGGCGAGAGAT +
Preference number: 1 (lower is better)
Translates to: VRWRCSEACSHTPRH*WSSLQRKAELLARD
Trigger: ATCTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTaGGGTGAGAAAGGAAAACAGACCCACGAAATCCTGAGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: VADFEGRERERLCDD*GEKGKQTHEILSPA
Trigger: GGCAGGGCTCAGGATTTCGTGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 90 bp TGTCCCTGGGCCAGCACCATAATCCTATCGGAGCCTAGAACCGTGTaGAGGCGATGGGCAATGGTCAGCATGGTACAGTCTGCAAATGCT +
Preference number: 1 (lower is better)
Translates to: CPWASTIILSEPRTV*RRWAMVSMVQSANA
Trigger: AGCATTTGCAGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAGGCTCCGATAGGATTATGGTGCTGGCCCAGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 90 bp AGCCATGATGGTACTTTCCCTTGGGATGCTCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGGCATCAAGAGAGAGGCCCTCGGCTC +
Preference number: 1 (lower is better)
Translates to: SHDGTFPWDAPHPGF*AENAWRHQERGPRL
Trigger: GAGCCGAGGGCCTCTCTCTTGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATCATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 90 bp TTTCTCAGGGCTTATTTGCCACAGACCTGCCAAACATGTGATAACTaGCTCCAGGCACTTGGTATGTTCCCGGTGCTGGCTCACCAGCCC +
Preference number: 1 (lower is better)
Translates to: FLRAYLPQTCQTCDN*LQALGMFPVLAHQP
Trigger: GGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAGTTATCACATGTTTGGCAGGTCTGTGGCAAATAAGCCCTGAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp CAGATTCCAACCAGTTTACCCTCTTGGATCTCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGCAGGTGGCCCAGGTGGATGTGCTTG +
Preference number: 1 (lower is better)
Translates to: QIPTSLPSWISRSML*SVLCKRRWPRWMCL
Trigger: CAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGACACTGCACAGCATCGATCTGGAGATCCAAGAGGGTAAACTGGTTGGAATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp GATGACAAGGGGCCCCACTGCCACAAGGAACCACGGGAAGACTCCTaGGATCATTCCCACACAGAAGAACACCAGGATAACGTTCTGGAT +
Preference number: 1 (lower is better)
Translates to: DDKGPHCHKEPREDS*DHSHTEEHQDNVLD
Trigger: ATCCAGAACGTTATCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTGTGGCAGTGGGGCCCCTTGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp GCCAGCACCATAATCCTATCGGAGCCTAGAACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTACAGTCTGCAAATGCTTCTCGGATG +
Preference number: 1 (lower is better)
Translates to: ASTIILSEPRTVCRR*AMVSMVQSANASRM
Trigger: CATCCGAGAAGCATTTGCAGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAGGCTCCGATAGGATTATGGTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 90 bp AAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCAC +
Preference number: 1 (lower is better)
Translates to: KCGTESQGQSPLFLT*SNSVRWRCSEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR GCA 90 bp CCAAAAGGCCCTCGAGCAGAGTTAGCATTCACCAAGAGAGAGCACTaGAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCGATGCTAAT +
Preference number: 1 (lower is better)
Translates to: PKGPRAELAFTKREH*RRRPSLADLQCDAN
Trigger: ATTAGCATCGCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAATGCTAACTCTGCTCGAGGGCCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp CAGCAGGTGGTTGCCTTGGGCTCCTTCCTTCCCATACCTTTAGAGTaGCATTTTTCAGCACTGGGTAATAGCATCAGCGCCTCCCAGATG +
Preference number: 1 (lower is better)
Translates to: QQVVALGSFLPIPLE*HFSALGNSISASQM
Trigger: CATCTGGGAGGCGCTGATGCTATTACCCAGTGCTGAAAAATGGCACTCTAAAGGTATGGGAAGGAAGGAGCCCAAGGCAACCACCTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp TGCCACAGTCTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTaGTTGGACAGAGACCACACGTCTTCCATTGAGAGCTCCCCCTTC +
Preference number: 1 (lower is better)
Translates to: CHSLSSLLQFTSEDS*LDRDHTSSIESSPF
Trigger: GAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGACTGTGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 90 bp GGTCAGCTTGGGCGAGTTCTGGATACTGGAGTGGGAGGAGTCCCATaGCAAGGTGGCATTTTTCATCTCTATCTTGATGTGAGGACTGGC +
Preference number: 1 (lower is better)
Translates to: GQLGRVLDTGVGGVP*QGGIFHLYLDVRTG
Trigger: GCCAGTCCTCACATCAAGATAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp GGGCGTAGATGCTGGCATAGTACTGCATATGAGGATTGTCCTTCATaGTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTGT +
Preference number: 1 (lower is better)
Translates to: GRRCWHSTAYEDCPS*CHSPRSRSLESQWC
Trigger: ACACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAATCCTCATATGCAGTACTATGCCAGCATCTACGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp TTCGTCAACAGGGAGGAGTCAGCCCTTGACAGCGACCTTGTTCTCTaGAGCAGCAAACATGGCATAGAATCGGGAACTGTCGTTGGACAG +
Preference number: 1 (lower is better)
Translates to: FVNREESALDSDLVL*SSKHGIESGTVVGQ
Trigger: CTGTCCAACGACAGTTCCCGATTCTATGCCATGTTTGCTGCTGCAGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCCCTGTTGACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp AATGAAAAAGTGCCACCTCAAAAAGCAGCAGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCA +
Preference number: 1 (lower is better)
Translates to: NEKVPPQKAAVGSRA*NQQVLELESSVQWP
Trigger: TGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAGGTGGCACTTTTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 90 bp TTGGACAGAGACCACACGTCTTCCATTGAGAGCTCCCCCTTCTTGTaGGCCACACGGGCCAGAGAAGAAAGCCACGAAAAAGTCATACAG +
Preference number: 1 (lower is better)
Translates to: LDRDHTSSIESSPFL*ATRAREESHEKVIQ
Trigger: CTGTATGACTTTTTCGTGGCTTTCTTCTCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR CCA 90 bp ACTCCTGCGATCATTCCCACACAGAAGAACACCAGGATAACGTTCTaGATGAACATCTCGGCCTGGAACGGCAGCCGCACGTCAACTTCA +
Preference number: 1 (lower is better)
Translates to: TPAIIPTQKNTRITF*MNISAWNGSRTSTS
Trigger: TGAAGTTGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp TGTTCTCTGCAGCAGCAAACATGGCATAGAATCGGGAACTGTCGTTaGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCT +
Preference number: 1 (lower is better)
Translates to: CSLQQQTWHRIGNCR*TEGPMGCQTPPPVP
Trigger: AGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATTCTATGCCATGTTTGCTGCTGCAGAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 90 bp CCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGAGGCCAGACACCACGGTCTGGAGGT +
Preference number: 1 (lower is better)
Translates to: PRCLIAKVTAAVSQS*MTDKNGGQTPRSGG
Trigger: ACCTCCAGACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 90 bp TGGTGTTTGGAAGTAGTCCGGATGGGCTTCAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGATGCTCCTCATCCAGGATTCTGAGC +
Preference number: 1 (lower is better)
Translates to: WCLEVVRMGFRALKP*WYFPLGCSSSRILS
Trigger: GCTCAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCTGAAGCCCATCCGGACTACTTCCAAACACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 90 bp CCACACAACGTGCTCTCACCCACTCATAGCACTGCAAGACACATCTaGCTGCACCGACTGTCAGTTCATGTTAACACACAACCGAGAAGC +
Preference number: 1 (lower is better)
Translates to: PHNVLSPTHSTARHI*LHRLSVHVNTQPRS
Trigger: GCTTCTCGGTTGTGTGTTAACATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGTGCTATGAGTGGGTGAGAGCACGTTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp AAAAACTTCATAGGGCTTCGAAGGATCCTTCGGAAAAGCTCGTCATaGAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAAAGACAACT +
Preference number: 1 (lower is better)
Translates to: KNFIGLRRILRKSSS*SREEARSVPLTKTT
Trigger: AGTTGTCTTTGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAGGATCCTTCGAAGCCCTATGAAGTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp CCTGACAGCACCAAGCAAGCTGCAGGTGGAGAGAGGTTGGAAGGGTaGGAAACTTACCTCTCTAAGGGTTTTACACTGTCCTTTCCCCAA +
Preference number: 1 (lower is better)
Translates to: PDSTKQAAGGERLEG*ETYLSKGFTLSFPQ
Trigger: TTGGGGAAAGGACAGTGTAAAACCCTTAGAGAGGTAAGTTTCCCACCCTTCCAACCTCTCTCCACCTGCAGCTTGCTTGGTGCTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 90 bp ACTGTCTTGGACTTGAGATGTTTCCGGATAGCACTATTGAAGATGTaGTTGCCCACATGGGCATCTAAGGCACTGAGGGGGTCGTCCAGG +
Preference number: 1 (lower is better)
Translates to: TVLDLRCFRIALLKM*LPTWASKALRGSSR
Trigger: CCTGGACGACCCCCTCAGTGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 90 bp GGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATA +
Preference number: 1 (lower is better)
Translates to: GSKFDLTVPLNSTGS*GMIESLLRRSARPI
Trigger: TATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR GCA 90 bp ACAACGTGCTCTCACCCACTCATAGCACTGCAAGACACATCTGCCTaGACCGACTGTCAGTTCATGTTAACACACAACCGAGAAGCACAG +
Preference number: 1 (lower is better)
Translates to: TTCSHPLIALQDTSA*TDCQFMLTHNREAQ
Trigger: CTGTGCTTCTCGGTTGTGTGTTAACATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGTGCTATGAGTGGGTGAGAGCACGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp GCCTTAAGGTGCTCTTCCCTGAAACGGCAGAGAGAAGAAAAAGCATaGTGCTGCTTTCCTGTTAAAGGAGGGCTCTTAGCTTTCCCTGGC +
Preference number: 1 (lower is better)
Translates to: ALRCSSLKRQREEKA*CCFPVKGGLLAFPG
Trigger: GCCAGGGAAAGCTAAGAGCCCTCCTTTAACAGGAAAGCAGCAGCATGCTTTTTCTTCTCTCTGCCGTTTCAGGGAAGAGCACCTTAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp AAGCCCATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: KPIHPSTQVPYSKGD*SCKSELNDRQKWRP
Trigger: TGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGATGGGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR GCA 90 bp CTCAGCTCTAGGGCAGAATCCCATGAAATAACACTGGCCTTAAGGTaGTCTTCCCTGAAACGGCAGAGAGAAGAAAAAGCATGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: LSSRAESHEITLALR*SSLKRQREEKACCC
Trigger: GCAGCAGCATGCTTTTTCTTCTCTCTGCCGTTTCAGGGAAGAGCACCTTAAGGCCAGTGTTATTTCATGGGATTCTGCCCTAGAGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 90 bp CTTGACAAAGACAACTCCTCGAATGGCTTTCAGGATCAGCATGACTaGCATGGAGAGGGCGTAGATGCTGGCATAGTACTGCATATGAGG +
Preference number: 1 (lower is better)
Translates to: LDKDNSSNGFQDQHD*HGEGVDAGIVLHMR
Trigger: CCTCATATGCAGTACTATGCCAGCATCTACGCCCTCTCCATGGCAGTCATGCTGATCCTGAAAGCCATTCGAGGAGTTGTCTTTGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 90 bp ACACAGAAGAACACCAGGATAACGTTCTGGATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCAACTTCATCCATGTCTTTGGAAAAC +
Preference number: 1 (lower is better)
Translates to: TQKNTRITFWMNISA*NGSRTSTSSMSLEN
Trigger: GTTTTCCAAAGACATGGATGAAGTTGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGTGTTCTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp CGACTGTCAGTTCATGTTAACACACAACCGAGAAGCACAGTCCTGTaGAGAACTGGAGTCAGTTCCATTTCACCCCCACCCAGAAATCAA +
Preference number: 1 (lower is better)
Translates to: RLSVHVNTQPRSTVL*RTGVSSISPPPRNQ
Trigger: TTGATTTCTGGGTGGGGGTGAAATGGAACTGACTCCAGTTCTGCACAGGACTGTGCTTCTCGGTTGTGTGTTAACATGAACTGACAGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp TATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAGAATGAAATGCTACTCTTCCTACAG +
Preference number: 1 (lower is better)
Translates to: YCHTSSFGHPENLAP*NHQLEKNEMLLFLQ
Trigger: CTGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 90 bp TCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTaGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGA +
Preference number: 1 (lower is better)
Translates to: STSPLPQIFRFISIA*VTTVYSRVAGLLAR
Trigger: TCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR CCA 90 bp AGGCACATACTTACCAAAACCATGAACCTCCAGCTTACCCACATATaGAAAACGCACAGTACAAGCAGTACTACTGCTCCGATGCCTCAA +
Preference number: 1 (lower is better)
Translates to: RHILTKTMNLQLTHI*KTHSTSSTTAPMPQ
Trigger: TTGAGGCATCGGAGCAGTAGTACTGCTTGTACTGTGCGTTTTCCATATGTGGGTAAGCTGGAGGTTCATGGTTTTGGTAAGTATGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp GAATTCTATGAGATCAGAGCAGCCACCAGCCCTGTAGTGAAACAATaGCAGAAGCTCTTCTTGGGGGAAGCTGGCTCTATGAAAATGTTT +
Preference number: 1 (lower is better)
Translates to: EFYEIRAATSPVVKQ*QKLFLGEAGSMKMF
Trigger: AAACATTTTCATAGAGCCAGCTTCCCCCAAGAAGAGCTTCTGTCATTGTTTCACTACAGGGCTGGTGGCTGCTCTGATCTCATAGAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 90 bp AGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTATCTTaGTGTGAGGACTGGCTGGTTTGTTCTTTATCATGTGAACCTCTT +
Preference number: 1 (lower is better)
Translates to: SGRSPMPRWHFSSLS*CEDWLVCSLSCEPL
Trigger: AAGAGGTTCACATGATAAAGAACAAACCAGCCAGTCCTCACATCAAGATAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 90 bp GTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGCTaGTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGT +
Preference number: 1 (lower is better)
Translates to: VQKLLRQCETLISKS*LKLQTLRGERERDC
Trigger: ACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 90 bp GTTTATATCCATTGCTTGGGTCACCACTGTATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCC +
Preference number: 1 (lower is better)
Translates to: VYIHCLGHHCIQPGC*FTSKKIGFFSSMQS
Trigger: GGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGCAATGGATATAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 90 bp GAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCAC +
Preference number: 1 (lower is better)
Translates to: EIPTNQIFAKSQEIT*SNRRLQIPRTTVFH
Trigger: GTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 90 bp AAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTaGAGCATTGCAGTAACATACATTGAAACATACAGAGTCGAGTTA +
Preference number: 1 (lower is better)
Translates to: KVPSSKSISQTLYSR*SIAVTYIETYRVEL
Trigger: TAACTCGACTCTGTATGTTTCAATGTATGTTACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: VADFEGRERERLCDDCGEGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGTCTCCAGCCACCCCTaGAGCGGCCGTGGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSVSSHP*SGRGEA
Trigger: CGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGAC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp ATTGTCCTTCATGCTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: IVLHAVTHRGLVPSSHSGGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...ACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp TGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAGCACCGCCTGATGCTCAGTaGGCTGCAGCTGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: WTEGPMGCQTPPPVPGPAPPDAQ*AAAASP
Trigger: AGGTGAGGCAGCTGCAGCGCACTGAGCATCAGGCGG...TGCTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGCTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCA +
Preference number: 2 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKLPLRD*AARHCP
Trigger: TGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAG...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGGGCTTCGCCCCGCTaGTCTCCTGACAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALWASPR*SPDRNS
Trigger: ACTGTTTCTGTCAGGAGAGCAGCGGGGCGAAGCCCA...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGGACACCCAGAAAACCTaGCACCGTGAAACCACCAGC +
Preference number: 2 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWDTQKT*HRETTS
Trigger: GCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTC...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 90 bp ATTTGCCACAGACCTGCCAAACATGTGATAACTGCCTCCAGGCACTaGGTATGTTCCCGGTGCTGGCTCACCAGCCCGGGCCACACAACG +
Preference number: 2 (lower is better)
Translates to: ICHRPAKHVITASRH*VCSRCWLTSPGHTT
Trigger: CGTTGTGTGGCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAGTTATCACATGTTTGGCAGGTCTGTGGCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGAACTCACGGCGCTCTaGATGGTCTCCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: PARRNVSVIPILDGGSEKELTAL*MVSSRP
Trigger: TGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp ATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCAACTTCATTCAGCTCTGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 2 (lower is better)
Translates to: IHTTLRREAASGPTSFSSALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...AGAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp GCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCAACTTCACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 2 (lower is better)
Translates to: AAEDPHNPSQGSSVWPNFTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...GAAGTTGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGTCAGTGCGCTGCAGCTaGCTCACCTTCTCTTTCTTG +
Preference number: 2 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWSVRCS*LTFSFL
Trigger: CAAGAAAGAGAAGGTGAGGCAGCTGCAGCGCACTGA...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp GAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAAAGACTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCG +
Preference number: 2 (lower is better)
Translates to: EKLVMQPGGSSQRALDKDWPRWM*LPSSSS
Trigger: CGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCA...GTCTTTGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp GACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGACGCTTCAGCCTGATCCTCTGGCGCTaGCCACCGCTCAGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: DVMWERKGDCVILSRRFSLILWR*PPLRLA
Trigger: AGCCAACCTGAGCGGTGGGCAGCGCCAGAGGATCAG...GCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp ATGCAGCCTCCAGATAACTCCACCAGACGGAAGAGGGCCATCCCCAGCGAGGACCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGC +
Preference number: 2 (lower is better)
Translates to: MQPPDNSTRRKRAIPSEDPHVFL*TPRKPG
Trigger: GCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGG...GTCCTCGCTGGGGATGGCCCTCTTCCGTCTGGTGGAGTTATCTGGAGGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCA +
Preference number: 2 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKMNISA*NGSRTS
Trigger: TGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCAT...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGAGACCCACGAAATCCTaGGCCCTGCCACTGAACTGT +
Preference number: 2 (lower is better)
Translates to: VADFEGRERERLCDDCGERPTKS*ALPLNC
Trigger: ACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCT...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACACAGCAACCAGCAACCTaGGGTAGGTCTCTTTACAGT +
Preference number: 2 (lower is better)
Translates to: LRKSSSCSREEARSVPLTQQPAT*GRSLYS
Trigger: ACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTG...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCTCAACCACCAGGTGCTaGAGGCGGTGCTGCCTACAT +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSSTTRC*RRCCLH
Trigger: ATGTAGGCAGCACCGCCTTCAGCACCTGGTGGTTGA...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp GTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGGCTGATTGGGCTTCGCCCCGCTaGTCTCCTGACAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: VVQDVDAPVTIQGPGKADWASPR*SPDRNS
Trigger: ACTGTTTCTGTCAGGAGAGCAGCGGGGCGAAGCCCA...ATCAGCCTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp TTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCGACCCCCGGGCACCCTaGACATATAGCGGCAGTCCC +
Preference number: 2 (lower is better)
Translates to: LGHHCIQPGCWFTSKKIGDPRAP*TYSGSP
Trigger: GGGACTGCCGCTATATGTGCAGGGTGCCCGGGGGTC...GCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp ATGCAGCCTCCAGATAACTCCACCAGACGGAAGAGGGCCATCCCCAGCGAGGACGTGGGAGGAGTCCCATaGCAAGGTGGCATTTTTCAT +
Preference number: 2 (lower is better)
Translates to: MQPPDNSTRRKRAIPSEDVGGVP*QGGIFH
Trigger: ATGAAAAATGCCACCTTGGCATGGGACTCCTCCCAC...GTCCTCGCTGGGGATGGCCCTCTTCCGTCTGGTGGAGTTATCTGGAGGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTAGGAACCTGAGGCAGTaGGACTCTCTGTGGATAGAC +
Preference number: 2 (lower is better)
Translates to: AAVGSRAWNQQVLELESSRNLRQ*DSLWID
Trigger: GTCTATCCACAGAGAGTCCCACTGCCTCAGGTTCCT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAATCAGAATCTTACAGTaGCGGAGCAGGGCTCTAGCT +
Preference number: 2 (lower is better)
Translates to: LRKSSSCSREEARSVPLTIRILQ*RSRALA
Trigger: AGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGAT...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTTTTGGGGGTCAGCTTaGGCGAGTTCTGGATACTGG +
Preference number: 2 (lower is better)
Translates to: APQHKGGLREHTKPHSNQFWGSA*ASSGYW
Trigger: CCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGTCCCTCGAGTCACAGTaGTGTTCCCGCTTCCTTGCT +
Preference number: 2 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKSLESQ*CSRFLA
Trigger: AGCAAGGAAGCGGGAACACCACTGTGACTCGAGGGA...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp TCACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATaGAGAGCTCCCCCTTCTTGTGGGCCACACGGGCCAGAGAAGAAA +
Preference number: 2 (lower is better)
Translates to: SRQKTRAWTETTRLP*RAPPSCGPHGPEKK
Trigger: TTTCTTCTCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCAACTTCATTCAGCTCTTCCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 2 (lower is better)
Translates to: PHNPSQGSSVWPNFIQLFPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...GAAGAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR TCA 90 bp TGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAGCAAGAGAGGTGCAAAGATaGGACACTGGATCAAGACCA +
Preference number: 2 (lower is better)
Translates to: WTEGPMGCQTPPPVPGPAREVQR*DTGSRP
Trigger: TGGTCTTGATCCAGTGTCTCATCTTTGCACCTCTCT...TGCTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp AACTTCATCCATGTCTTTGGAAAACCTGTTGAGAATCCTCCCTGTGGGGGTCGTTCTGCCAGCACCGCCTaGTGCTCAGTGCGCTGCAGC +
Preference number: 2 (lower is better)
Translates to: NFIHVFGKPVENPPCGGRSASTA*CSVRCS
Trigger: GCTGCAGCGCACTGAGCATCAGGCGGTGCTGGCAGA...ACGACCCCCACAGGGAGGATTCTCAACAGGTTTTCCAAAGACATGGATGAAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp TGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCTGTTTGACGCTGCAGTaGGCCATGGTCATGCCACCG +
Preference number: 2 (lower is better)
Translates to: WPQARSLRLVCVTLQNPICLTLQ*AMVMPP
Trigger: CGGTGGCATGACCATGGCTCACTGCAGCGTCAAACA...GATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR-3UTR GCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGAGACTGTGCGACGACTaGGGTGAGAAAGGAAAACAG +
Preference number: 2 (lower is better)
Translates to: APQHKGGLREHTKPHSNQRLCDD*GEKGKQ
Trigger: CTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCT...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp GACAGGATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 2 (lower is better)
Translates to: DRMSLVRQKIHTTLRREAALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...TGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp CTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCAGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 2 (lower is better)
Translates to: LVRQKIHTTLRREAASGPVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...TGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCCCAGGTGGATGTGCTTaGCTTCTTCCTCTTCGGGAC +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSPGGCA*LLPLRD
Trigger: GTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGG...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp TGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAGCACGTCCAGGATGTAGATaGTCCTGTCACTATACAAGG +
Preference number: 2 (lower is better)
Translates to: WTEGPMGCQTPPPVPGPARPGCR*SCHYTR
Trigger: CCTTGTATAGTGACAGGAGCATCTACATCCTGGACG...TGCTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAGCCCCAGGCAGGGAATaGCAATGCTCTAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKAPGRE*QCSKEK
Trigger: CTTTTCTTTAGAGCATTGCCATTCCCTGCCTGGGGC...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGC +
Preference number: 2 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSPHVFL*TPRKPG
Trigger: GCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGTCTCCAGCCACCCCTaGAGCGGCCGTGGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEVSSHP*SGRGEA
Trigger: CGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGAC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCG +
Preference number: 2 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVSRRSA*SPAAHP
Trigger: CGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGA...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp TTCACCAAGAGAGAGCACTGCAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCTGGGGAGCCCGTATGTaGGCAGTCTGTCCTTACACA +
Preference number: 2 (lower is better)
Translates to: FTKREHCRRRPSLADLQCWGARM*AVCPYT
Trigger: TGTGTAAGGACAGACTGCCCACATACGGGCTCCCCA...GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp ATGCAGCCTCCAGATAACTCCACCAGACGGAAGAGGGCCATCCCCAGCGAGGACGCAAAGATGAGACACTaGATCAAGACCAGGGAGACA +
Preference number: 2 (lower is better)
Translates to: MQPPDNSTRRKRAIPSEDAKMRH*IKTRET
Trigger: TGTCTCCCTGGTCTTGATCCAGTGTCTCATCTTTGC...GTCCTCGCTGGGGATGGCCCTCTTCCGTCTGGTGGAGTTATCTGGAGGCTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGCGAGTTCTGGATACTaGAGTGGGAGGAGTCCCATG +
Preference number: 2 (lower is better)
Translates to: AALLTETVSDTRTEGRSPASSGY*SGRSPM
Trigger: CATGGGACTCCTCCCACTCCAGTATCCAGAACTCGC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp TCAAAGGTCACCTCTCCCTCCTGGGGCCAGTCAGGGGAGGGAGCCTaGTTCTTAATTCTGGCAGGTGCTTCCAAGGACAGAGTCTTAATG +
Preference number: 2 (lower is better)
Translates to: SKVTSPSWGQSGEGA*FLILAGASKDRVLM
Trigger: CATTAAGACTCTGTCCTTGGAAGCACCTGCCAGAATTAAGAACAAGGCTCCCTCCCCTGACTGGCCCCAGGAGGGAGAGGTGACCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAACCTGAGCCCTGCCACTaGACTGTGGAGGTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQEPEPCH*TVEVWE
Trigger: TTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGG...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp TGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAGCAATCTCTATCTTGATGTaGGGACTGGCTGGTTTGTTC +
Preference number: 2 (lower is better)
Translates to: WTEGPMGCQTPPPVPGPAISILM*GLAGLF
Trigger: GAACAAACCAGCCAGTCCTCACATCAAGATAGAGAT...TGCTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAAGCCAATCCGGAACTaGTGTGCGAAAGATAAAATC +
Preference number: 2 (lower is better)
Translates to: GAGELCAVASHRNLRQWDKPIRN*CAKDKI
Trigger: GATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGCCCCAGGCAGGGAATaGCAATGCTCTAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: AWNQQVLELESSVQWPAIAPGRE*QCSKEK
Trigger: CTTTTCTTTAGAGCATTGCCATTCCCTGCCTGGGGC...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGACACCCAGAAAACCTaGCACCGTGAAACCACCAGC +
Preference number: 2 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRDTQKT*HRETTS
Trigger: GCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCG +
Preference number: 2 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCSRRSA*SPAAHP
Trigger: CGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCTTCTGGATACTGGAGTaGGAGGAGTCCCATGCCAAG +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSFWILE*EESHAK
Trigger: CTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAA...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GGCAGGGAATGGCAATGCTCTAAAGAAAAGAGACTTCGTCAACAGGGAGGAGTCCGCAGGTGGCCCAGGTaGATGTGCTTGCCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: GREWQCSKEKRLRQQGGVRRWPR*MCLPSS
Trigger: GGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCG...GACTCCTCCCTGTTGACGAAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp TGCTTGGACAGAGACCACACGTCTTCCATTGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGAGAAGAAAGCCACGAAAAAGTCATA +
Preference number: 2 (lower is better)
Translates to: CLDRDHTSSIESSPF*WATRAREESHEKVI
Trigger: TATGACTTTTTCGTGGCTTTCTTCTCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR CAA 90 bp TGTATGCTGGACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATaGTCCAGACGCTTCAGCTCCCGAATCAGGACCCTGGAGACAATG +
Preference number: 2 (lower is better)
Translates to: CMLDVMWERKGDCVI*SRRFSSRIRTLETM
Trigger: CATTGTCTCCAGGGTCCTGATTCGGGAGCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTCCAGCATACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp CGGAGGTCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTaGATGCAGCCTCCAGATAACTCCACCAGACGGAAGAGGGCCATC +
Preference number: 2 (lower is better)
Translates to: RRSARPISLILTPSI*MQPPDNSTRRKRAI
Trigger: GATGGCCCTCTTCCGTCTGGTGGAGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGACCTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAG +
Preference number: 2 (lower is better)
Translates to: PARRNVSVIPILDGGSEKENLAP*NHQLEK
Trigger: CTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGAGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAG +
Preference number: 2 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGENLAP*NHQLEK
Trigger: CTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTC...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCA +
Preference number: 2 (lower is better)
Translates to: LTETVSDTRTEGRSPENSVRRLR*ERKTDP
Trigger: TGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCAC...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAACAGCACTCAATCAGTaGGGGCTCCTGAGGTTGCAA +
Preference number: 2 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPTALNQ*GLLRLQ
Trigger: TTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGT...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAAGATTCTGCCCAGCTTaGCTCTCTCATTCTGACCGC +
Preference number: 2 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPRFCPA*LSHSDR
Trigger: GCGGTCAGAATGAGAGAGTCAAGCTGGGCAGAATCT...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCGACAATGTGCAGGACTaGAAAGAGGATGACAAGGGG +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSDNVQD*KEDDKG
Trigger: CCCCTTGTCATCCTCTTTTCAGTCCTGCACATTGTC...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACGGAGGGCCCACTATTaGCACACGTCTTCCTTTGGA +
Preference number: 2 (lower is better)
Translates to: LTETVSDTRTEGRSPENSRRAHY*HTSSFG
Trigger: TCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCG...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGAACTCACGGCGCTCTaGATGGTCTCCAGCCGCCCA +
Preference number: 2 (lower is better)
Translates to: LISKSCLKLQTLRGERERELTAL*MVSSRP
Trigger: TGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTC...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGAGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGERERL*DDCGEK
Trigger: TTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTC...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAAGCACAAAGGGGGTTTaGGGGAACACACCAAACCAC +
Preference number: 2 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRSTKGV*GNTPNH
Trigger: GTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp TTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCCCGGGCCACACAACGTaGTCTCACCCACTCATAGCA +
Preference number: 2 (lower is better)
Translates to: LGHHCIQPGCWFTSKKIGPGHTT*SHPLIA
Trigger: TGCTATGAGTGGGTGAGAGCACGTTGTGTGGCCCGG...GCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp GTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGGCTGATTCACCTTCTCTTTCTTaGCCCTGGAAGCCCTCTTGT +
Preference number: 2 (lower is better)
Translates to: VVQDVDAPVTIQGPGKADSPSLS*PWKPSC
Trigger: ACAAGAGGGCTTCCAGGGGCAAGAAAGAGAAGGTGA...ATCAGCCTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGACCTTTCTCTTCCAGCTaGACAAGCTGCCCTTCCTCT +
Preference number: 2 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGPFSSS*TSCPSS
Trigger: AGAGGAAGGGCAGCTTGTGCAGCTGGAAGAGAAAGG...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAAGGAACCTGAGGCAGTaGGACTCTCTGTGGATAGAC +
Preference number: 2 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRRNLRQ*DSLWID
Trigger: GTCTATCCACAGAGAGTCCCACTGCCTCAGGTTCCT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp GCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 2 (lower is better)
Translates to: AVSKGRLKGQQVVALGSFSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...GAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAACCAGTTTACCCTCTTaGATCTCCAGATCGATGCTG +
Preference number: 2 (lower is better)
Translates to: AWNQQVLELESSVQWPAITSLPS*ISRSML
Trigger: CAGCATCGATCTGGAGATCCAAGAGGGTAAACTGGT...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp CACAGTCTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCTTCCATTGAGAGCTCCCCCTTCTTG +
Preference number: 2 (lower is better)
Translates to: HSLSSLLQFTSEDSC*DRDHTSSIESSPFL
Trigger: CAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGACTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR CAA 90 bp GTCTTGGACTTGAGATGTTTCCGGATAGCACTATTGAAGATGTGGTaGCCCACATGGGCATCTAAGGCACTGAGGGGGTCGTCCAGGATG +
Preference number: 2 (lower is better)
Translates to: VLDLRCFRIALLKMW*PTWASKALRGSSRM
Trigger: CATCCTGGACGACCCCCTCAGTGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp TTTCCAGTATGCAATCCAAAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: FPVCNPKCGTESQGQSPLHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...AAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGATTGCATACTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TTCACCAAGAGAGAGCACTGCAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCTTAGAGGGGAGCCAATaGAGTTCTTGCATTGGCCAA +
Preference number: 2 (lower is better)
Translates to: FTKREHCRRRPSLADLQCLEGSQ*SSCIGQ
Trigger: TTGGCCAATGCAAGAACTTCATTGGCTCCCCTCTAA...GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAAAGCCAATCCGGAACTaGTGTGCGAAAGATAAAATC +
Preference number: 2 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKKPIRN*CAKDKI
Trigger: GATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGCACAAAGGGGGTTTaGGGGAACACACCAAACCAC +
Preference number: 2 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSTKGV*GNTPNH
Trigger: GTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCATCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGC +
Preference number: 2 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSRSML*SVLCKR
Trigger: GCGCTTACAGAGGACACTGCACAGCATCGATCTGGA...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGCCCCAGGCAGGGAATaGCAATGCTCTAAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: PARRNVSVIPILDGGSEKAPGRE*QCSKEK
Trigger: CTTTTCTTTAGAGCATTGCCATTCCCTGCCTGGGGC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGGGAAGGCTGAACTCTTaGCGAGAGATTCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: KMAGATGALSCEELPLLGGRLNS*REILPS
Trigger: GCTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCC...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp CTGCAGTTCACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATTCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LQFTSEDSCLDRDHTSSIPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...AATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR CCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCACTCTGTAAGCGCAGGTaGCCCAGGTGGATGTGCTTG +
Preference number: 2 (lower is better)
Translates to: SARPISLILTPSILMQPPLCKRR*PRWMCL
Trigger: CAAGCACATCCACCTGGGCCACCTGCGCTTACAGAG...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAGAGGGCGTAGATGCTaGCATAGTACTGCATATGAG +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSRGRRC*HSTAYE
Trigger: CTCATATGCAGTACTATGCCAGCATCTACGCCCTCT...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GGCAGGGAATGGCAATGCTCTAAAGAAAAGAGACTTCGTCAACAGGGAGGAGTCACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTA +
Preference number: 2 (lower is better)
Translates to: GREWQCSKEKRLRQQGGVTVCRR*AMVSMV
Trigger: TACCATGCTGACCATTGCCCATCGCCTGCACACGGT...GACTCCTCCCTGTTGACGAAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp TGTGGGAATAGGCAAATGAAAAAGTGCCACCTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: CGNRQMKKCHLKKQQ*APGLGTNRSWSWRA
Trigger: AGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAGGTGGCACTTTTTCATTTGCCTATTCCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 90 bp CAGTGTGAGACACTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGA +
Preference number: 2 (lower is better)
Translates to: QCETLISKSCLKLQT*RGERERDCATTAVR
Trigger: TCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAGTGTCTCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCCAGCCATAGGAACCTaGGGCAGTGGGACTCTCTGT +
Preference number: 2 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLPAIGT*GSGTLC
Trigger: ACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCCTGAGCCCTGCCACTaGACTGTGGAGGTGTGGGAA +
Preference number: 2 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCPEPCH*TVEVWE
Trigger: TTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGTCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLSKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACATTTTTCCTTCTTTACTaGTCCTGTTTTAGGACCCTT +
Preference number: 2 (lower is better)
Translates to: LRKSSSCSREEARSVPLTFFLLY*SCFRTL
Trigger: AAGGGTCCTAAAACAGGATCAGTAAAGAAGGAAAAA...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATCTGCCTCCAGGCACTTaGTATGTTCCCGGTGCTGGC +
Preference number: 2 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNLPPGT*YVPGAG
Trigger: GCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAG...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp TTCACCAAGAGAGAGCACTGCAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCAAATGCCATTTTATTTaGGGAGCCCGTATGTGGGCA +
Preference number: 2 (lower is better)
Translates to: FTKREHCRRRPSLADLQCKCHFI*GARMWA
Trigger: TGCCCACATACGGGCTCCCCAAATAAAATGGCATTT...GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp AGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGAACGATAGGTACTGTAACTGGTaGGTAACAAACAGAACTGTC +
Preference number: 2 (lower is better)
Translates to: RDGETRIGWGNLPVHKNDRYCNW*VTNRTV
Trigger: GACAGTTCTGTTTGTTACCCACCAGTTACAGTACCT...ATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp TGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCAAAGTTAGCCAGGCATaGTGGCACGAGATTGTAGTC +
Preference number: 2 (lower is better)
Translates to: WPQARSLRLVCVTLQNPIKVSQA*WHEIVV
Trigger: GACTACAATCTCGTGCCACCATGCCTGGCTAACTTT...GATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR CAA 90 bp CTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACT +
Preference number: 2 (lower is better)
Translates to: LLRQCETLISKSCLK*QTLRGERERDCATT
Trigger: AGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAGTGTCTCACACTGGCGTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCA +
Preference number: 2 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLVRRLR*ERKTDP
Trigger: TGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCAC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp GGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: GLEVATLNSKTQTLSGLISKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...AATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGATCAGTGAGGGCTCCTaGGGTTGCAATGATTCTGCA +
Preference number: 2 (lower is better)
Translates to: YQADSTQSVRAPEVAMILISEGS*GCNDSA
Trigger: TGCAGAATCATTGCAACCTCAGGAGCCCTCACTGAT...CAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp ACAAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAACCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 2 (lower is better)
Translates to: TKMEARHHGLEVATLNSKPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...TTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TCTTGCCACAGTCTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTGCTTGTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 2 (lower is better)
Translates to: SCHSLSSLLQFTSEDSCLSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...CAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGACTGTGGCAAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGGCAGGGAATGGCAATaGTCTAAAGAAAAGAGACTT +
Preference number: 2 (lower is better)
Translates to: AALLTETVSDTRTEGRSPGREWQ*SKEKRL
Trigger: AAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp GCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCCACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 2 (lower is better)
Translates to: AVSKGRLKGQQVVALGSFHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...GAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp CTGCAGTTCACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATTTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 2 (lower is better)
Translates to: LQFTSEDSCLDRDHTSSIYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...AATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR GCA 90 bp GATCTCAACTGGCGGTGTCTCTCCCAGCAACAGGTTATTAAAAATGGTAGCATATCTCCGTCAGGTCGCTaGTGGGAAGAATGGCCAGGT +
Preference number: 2 (lower is better)
Translates to: DLNWRCLSQQQVIKNGSISPSGR*WEEWPG
Trigger: ACCTGGCCATTCTTCCCAGCAGCGACCTGACGGAGA...TATGCTACCATTTTTAATAACCTGTTGCTGGGAGAGACACCGCCAGTTGAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAG +
Preference number: 2 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRVGSRA*NQQVLE
Trigger: CTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAAC...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CCA 90 bp GAGTCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTACTCTGCTCAAAATaGCTGGTGCTACTGGTGCAC +
Preference number: 2 (lower is better)
Translates to: ESKVVYQADSTQSVRAPEVLCSK*LVLLVH
Trigger: GTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTAC...CTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVSNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR CAA 90 bp ACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACATGGGCATCTAAGGCACTGAGGGGG +
Preference number: 2 (lower is better)
Translates to: TNRTVLDLRCFRIAL*KMWLPTWASKALRG
Trigger: CCCCCTCAGTGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCCAGCTAGAGAAGAATaGAATGCTACTCTTCCTACA +
Preference number: 2 (lower is better)
Translates to: PARRNVSVIPILDGGSEKPAREE*NATLPT
Trigger: TGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTTGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTTCTCCAAAGGAAGGCTaGACTCTTGGCGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVSPKEG*TLGERF
Trigger: GAATCTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGA...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACC +
Preference number: 2 (lower is better)
Translates to: QELLYSTSPLPQIFRFISKMAVQ*SLFPHT
Trigger: GGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTT...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACC +
Preference number: 2 (lower is better)
Translates to: GGILLGLFKSLHLKINLDKMAVQ*SLFPHT
Trigger: GGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTT...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCGTGAAGCCACCAAGCTaGATACGGATAGGTACCATT +
Preference number: 2 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVVKPPS*IRIGTI
Trigger: AATGGTACCTATCCGTATTCAGCTTGGTGGCTTCAC...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAAGAAGGGGTCCAAATTTaGTCTGACAGTGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQEEGVQI*SDSATE
Trigger: TTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTC...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSSFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAACTAAAATGGCTGAAATaGGAGAGGTTTTTCCACTTC +
Preference number: 2 (lower is better)
Translates to: THEILSPATELWRCGNRQLKWLK*ERFFHF
Trigger: GAAGTGGAAAAACCTCTCTCATTTCAGCCATTTTAG...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCAAAGCGAAGGTTCCACTaGTTGCAATGCTGCCCTCTA +
Preference number: 2 (lower is better)
Translates to: SARPISLILTPSILMQPPKRRFH*LQCCPL
Trigger: TAGAGGGCAGCATTGCAATCAGTGGAACCTTCGCTT...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGGCAGGGAATGGCAATaGTCTAAAGAAAAGAGACTT +
Preference number: 2 (lower is better)
Translates to: PARRNVSVIPILDGGSEKGREWQ*SKEKRL
Trigger: AAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGTGGGCTTCGCCCCGCTaGTCTCCTGACAGAAACAGT +
Preference number: 2 (lower is better)
Translates to: GLFTVQKLLRQCETLISKWASPR*SPDRNS
Trigger: ACTGTTTCTGTCAGGAGAGCAGCGGGGCGAAGCCCA...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 2 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 2 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCTCAGTAAGATGGCGGTaGAGTGAAGCCTGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSSVRWR*SEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGA...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp ATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGACTGCAAGACACATCTaGCTGCACCGACTGTCAGTT +
Preference number: 2 (lower is better)
Translates to: IGDFRFQELLYSTSPLPQTARHI*LHRLSV
Trigger: AACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGT...CTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp AAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCTCTCTTGTCTACTCTaGATCAGTACAGACTGGGGA +
Preference number: 2 (lower is better)
Translates to: KNGGQTPRSGGSYAEFQNLSCLL*ISTDWG
Trigger: TCCCCAGTCTGTACTGATGCAGAGTAGACAAGAGAG...GTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCAGTCCTGTGCAGAACTaGAGTCAGTTCCATTTCACC +
Preference number: 2 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVSPVQN*SQFHFT
Trigger: GGTGAAATGGAACTGACTCCAGTTCTGCACAGGACT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp CAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCACTATAGTTAGCCAGGCATGGTaGCACGAGATTGTAGTCCTA +
Preference number: 2 (lower is better)
Translates to: QARSLRLVCVTLQNPITIVSQAW*HEIVVL
Trigger: TAGGACTACAATCTCGTGCCACCATGCCTGGCTAAC...TATAGTGATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR-3UTR TCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCTGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TCGCAAAGCCTGCATATGGTGCTACCCAGAGGAATGAATTCTATGAGATCAGAGCCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 2 (lower is better)
Translates to: SQSLHMVLPRGMNSMRSEPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...CTCTGATCTCATAGAATTCATTCCTCTGGGTAGCACCATATGCAGGCTTTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTACCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 2 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR TCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTGGAAAGGTGACTGCGTaGTATTGTCCAGACGCTTCA +
Preference number: 2 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVGKVTA*YCPDAS
Trigger: TGAAGCGTCTGGACAATATCACGCAGTCACCTTTCC...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCCTCTCCACCGAGGTaGATCGAGCTTCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESSPPR*IELLSQ
Trigger: CTGAGACAGAAGCTCGATTCACCTCGGTGGAGAGGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTAATACTACATACTCTAACACTTTGGGAGGCTaGGGTGGGAGGATGGCCTCA +
Preference number: 2 (lower is better)
Translates to: LPAGIQESKLVICNTTYSNTLGG*GGRMAS
Trigger: TGAGGCCATCCTCCCACCTCAGCCTCCCAAAGTGTT...AGAGTATGTAGTATTACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR-3UTR GCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAA +
Preference number: 2 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCERERL*DDCGEK
Trigger: TTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTC...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR GCA 90 bp TATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: YQADSTQSVRAPEVAMILYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...CAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 2 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp TTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTCAGTAAGATGGCGGTaGAGTGAAGCCTGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: FRFQELLYSTSPLPQIFRSVRWR*SEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGA...CCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACTTCTCAGGGCTTATTTaGCACAGACCTGCCAAACAT +
Preference number: 2 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHFSGLI*HRPAKH
Trigger: ATGTTTGGCAGGTCTGTGGCAAATAAGCCCTGAGAA...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGGTGTAAGAAACAGGTaGCCAGGAAACAGAGTGAAC +
Preference number: 2 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVGVRNR*PGNRVN
Trigger: GTTCACTCTGTTTCCTGGGCACCTGTTTCTTACACC...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: TLLKMAGATGALSCEELPLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 2 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGGGAAGGCTGAACTCTTaGCGAGAGATTCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: KYHLQRASHKHCTAGEALGRLNS*REILPS
Trigger: GCTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCC...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGCGTCACCAAAACCTTaGATCATCTTGGTGTATAAA +
Preference number: 2 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPASPKP*IILVYK
Trigger: TTTATACACCAAGATGATCCAAGGTTTTGGTGACGC...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGCTTGGGCGAGTTCTaGATACTGGAGTGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: GLFTVQKLLRQCETLISKSLGEF*ILEWEE
Trigger: CTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCT...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp CTGATTTTTAATATGCTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTGCTGAGGTGGGAGGATaGCCTCAGGCCAGGAGTTTG +
Preference number: 2 (lower is better)
Translates to: LIFNMLPAGIQESKLVICAEVGG*PQARSL
Trigger: CAAACTCCTGGCCTGAGGCCATCCTCCCACCTCAGC...ACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAGCATATTAAAAATCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR CAA 90 bp TTCCCTGATCCTGTCCGCCCCACAATGCCAATCTTCTCTTTAGGTTaGATCGTGAAGGATACTTTCTTTAGGACGAGAGGGAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: FPDPVRPTMPIFSLG*IVKDTFFRTRGRFS
Trigger: AGAAAACCTCCCTCTCGTCCTAAAGAAAGTATCCTTCACGATCAAACCTAAAGAGAAGATTGGCATTGTGGGGCGGACAGGATCAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: LLYSTSPLPQIFRFISIASKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...AGCAATGGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCCTCCTGAGGTTGCAATaGTTCTGCAACGGAGTAGAT +
Preference number: 2 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSLLRLQ*FCNGVD
Trigger: ATCTACTCCGTTGCAGAATCATTGCAACCTCAGGAG...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCTCTCCAAAGGAAGGCTaGACTCTTGGCGAGAGATTC +
Preference number: 2 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCSPKEG*TLGERF
Trigger: GAATCTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGA...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 2 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACC +
Preference number: 2 (lower is better)
Translates to: YIETYRVELYRTSHLTGHKMAVQ*SLFPHT
Trigger: GGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTT...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACCCCAAATCCAGATCCTaGCAGCACCAAGCAAGCTGC +
Preference number: 2 (lower is better)
Translates to: NTAILKILKNSFCHWFHYPKSRS*QHQASC
Trigger: GCAGCTTGCTTGGTGCTGTCAGGATCTGGATTTGGG...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp TTTCCAGTATGCAATCCAAAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTTGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: FPVCNPKCGTESQGQSPLCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...AAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGATTGCATACTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATTGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: STQVPYSKGDCSCKSELNCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCCATCCTTCCAGCTGTTaGCAAAATCCATCGACCCCT +
Preference number: 2 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCHPSSC*QNPSTP
Trigger: AGGGGTCGATGGATTTTGGCAACAGCTGGAAGGATG...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATCAAGACACATCTGCCTaGACCGACTGTCAGTTCATG +
Preference number: 2 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNQDTSA*TDCQFM
Trigger: CATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTG...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTGGTACAGTCTGCAAATaGTTCTCGGATGGTCTCTTG +
Preference number: 2 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVGTVCK*FSDGLL
Trigger: CAAGAGACCATCCGAGAAGCATTTGCAGACTGTACC...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 2 (lower is better)
Translates to: WVTTVYSRVAGLLARRLAIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAAATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 2 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGAATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 2 (lower is better)
Translates to: STQSVRAPEVAMILQRSRIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGAGGGCATCCCAAATCTaGTCTTCAGTGTACTGGTTG +
Preference number: 2 (lower is better)
Translates to: SSKIRILQWRSRALAMHKRASQI*SSVYWL
Trigger: CAACCAGTACACTGAAGACCAGATTTGGGATGCCCT...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR CAA 90 bp ACCAGGTACTGTAACTGGTGGGTAACAAACAGAACTGTCTTGGACTaGAGATGTTTCCGGATAGCACTATTGAAGATGTGGTTGCCCACA +
Preference number: 2 (lower is better)
Translates to: TRYCNWWVTNRTVLD*RCFRIALLKMWLPT
Trigger: TGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTTACAGTACCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATGCCCAGGAAACAGAGTaGACGTCAAAGGCTCTCTTG +
Preference number: 2 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHAQETE*TSKALL
Trigger: CAAGAGAGCCTTTGACGTTCACTCTGTTTCCTGGGC...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTATACTTACCAAAACCATaGACCTCCAGCTTACCCACA +
Preference number: 2 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLYLPKP*TSSLPT
Trigger: TGTGGGTAAGCTGGAGGTTCATGGTTTTGGTAAGTA...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCGTGTTTCATTTGTTCTaGTTATGGCTACCAAGGTTC +
Preference number: 2 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVVFHLF*LWLPRF
Trigger: GAACCTTGGTAGCCATAATCAGAACAAATGAAACAC...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTATATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 2 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGTCAGTAAGATGGCGGTaGAGTGAAGCCTGTTCCCAC +
Preference number: 2 (lower is better)
Translates to: IETYRVELYRTSHLTGHLSVRWR*SEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGA...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGAGAGGAAAGGTGACTaGGTGATATTGTCCAGACGC +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEERKGD*VILSRR
Trigger: GCGTCTGGACAATATCACGCAGTCACCTTTCCTCTC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp ATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCACTGATTCTCACTCCATCTAGAAGCGTCATCTaGCCTAAAATGGCTGAAATG +
Preference number: 2 (lower is better)
Translates to: IESLLRRSARPISLILTPSRSVI*PKMAEM
Trigger: CATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGA...TGGAGTGAGAATCAGTGATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 90 bp CAGTCAACCAGGTACTGTAACTGGTGGGTAACAAACAGAACTGTCTaGGACTTGAGATGTTTCCGGATAGCACTATTGAAGATGTGGTTG +
Preference number: 2 (lower is better)
Translates to: QSTRYCNWWVTNRTV*DLRCFRIALLKMWL
Trigger: CAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTTACAGTACCTGGTTGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCCAGCTAGAGAAGAATaGAATGCTACTCTTCCTACA +
Preference number: 2 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRPAREE*NATLPT
Trigger: TGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR TCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGTCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMSKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 2 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 2 (lower is better)
Translates to: GLFTVQKLLRQCETLISKNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATCACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 2 (lower is better)
Translates to: STQVPYSKGDCSCKSELNHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 2 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGAAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: STQSVRAPEVAMILQRSRNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAAAATGACAGACAAAAATaGAGGCCAGACACCACGGTC +
Preference number: 2 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKNDRQK*RPDTTV
Trigger: GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATT...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: IETYRVELYRTSHLTGHLSNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGCACTATTGAAGATGTaGTTGCCCACATGGGCATCT +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEALLKM*LPTWAS
Trigger: AGATGCCCATGTGGGCAACCACATCTTCAATAGTGC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp GGCAGGGAATGGCAATGCTCTAAAGAAAAGAGACTTCGTCAACAGGGAGGAGTCCAAATGCTTCTCGGATaGTCTCTTGAATCAATAAGT +
Preference number: 2 (lower is better)
Translates to: GREWQCSKEKRLRQQGGVQMLLG*SLESIS
Trigger: ACTTATTGATTCAAGAGACCATCCGAGAAGCATTTG...GACTCCTCCCTGTTGACGAAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMSQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp ACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGTTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 2 (lower is better)
Translates to: TIFKEHLTNTVQQVKHCSSQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...ACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATTGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 2 (lower is better)
Translates to: YIETYRVELYRTSHLTGHWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 2 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRSFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTTTTCATCTCTATCTTaGTGTGAGGACTGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCFSSLS*CEDWLV
Trigger: AACCAGCCAGTCCTCACATCAAGATAGAGATGAAAA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR GCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 2 (lower is better)
Translates to: TLLKMAGATGALSCEELPHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 2 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGCTTAATTCTGGCAGGTaGTTCCAAGGACAGAGTCTT +
Preference number: 2 (lower is better)
Translates to: KSETHKPIRNCCAKDKIELNSGR*FQGQSL
Trigger: AAGACTCTGTCCTTGGAAGCACCTGCCAGAATTAAG...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGCCATTTTTCAGCACTaGGTAATAGCATCAGCGCCT +
Preference number: 2 (lower is better)
Translates to: IETYRVELYRTSHLTGHLAIFQH*VIASAP
Trigger: AGGCGCTGATGCTATTACCCAGTGCTGAAAAATGGC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAAGTCCCATGCCAAGGTaGCATTTTTCATCTCTATCT +
Preference number: 2 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIASPMPR*HFSSLS
Trigger: AGATAGAGATGAAAAATGCCACCTTGGCATGGGACT...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR TCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAAGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 2 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGCTTCTCTGGCAACACTaGCCTTTCATCCTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVLLWQH*PFILPA
Trigger: AGCTGGAAGGATGAAAGGGCAGTGTTGCCAGAGAAG...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGTCAAGGAAAAACTGGTaGCATCCTTCTGGGTCTTTT +
Preference number: 2 (lower is better)
Translates to: KYHLQRASHKHCTAGEALSRKNW*HPSGSF
Trigger: AAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGA...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGCAGCTTACCCACATATaGAAAACGCACAGTACAAGC +
Preference number: 2 (lower is better)
Translates to: IETYRVELYRTSHLTGHLQLTHI*KTHSTS
Trigger: GCTTGTACTGTGCGTTTTCCATATGTGGGTAAGCTG...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 2 (lower is better)
Translates to: IETYRVELYRTSHLTGHLAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACGGAAAGCATTCCCAGTaGATAAACATTACCTTACCT +
Preference number: 2 (lower is better)
Translates to: GGILLGLFKSLHLKINLDGKHSQ*INITLP
Trigger: AGGTAAGGTAATGTTTATTCACTGGGAATGCTTTCC...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR GCA 90 bp GAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCTGAGATTATGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 2 (lower is better)
Translates to: EFQNPDSLWVNFLFFLRLCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...TAATCTCAGGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR GCA 90 bp CCTCAAAAGGATTTAAGTCCACAGACAGGAGGTTTACTCACTGCTAGTACTAATAGTACCCCAGTGTTCTaGACCATAAATGAGAGAATA +
Preference number: 2 (lower is better)
Translates to: PQKDLSPQTGGLLTASTNSTPVF*TINERI
Trigger: TATTCTCTCATTTATGGTGCAGAACACTGGGGTACT...ATTAGTACTAGCAGTGAGTAAACCTCCTGTCTGTGGACTTAAATCCTTTTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 2 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR TCA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGACACTGTACAGCAGGTaGAGCATTGCAGTAACATAC +
Preference number: 2 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRTLYSR*SIAVTY
Trigger: GTATGTTACTGCAATGCTTCACCTGCTGTACAGTGT...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACAACCTTGGATCATCTTaGTGTATAAATGTCAGCATC +
Preference number: 2 (lower is better)
Translates to: NTAILKILKNSFCHWFHYNLGSS*CINVSI
Trigger: GATGCTGACATTTATACACCAAGATGATCCAAGGTT...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR TCA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 2 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR CCA 72 bp GAAGGCAGGAGCCCTGAGAACTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCT +
Preference number: 3 (lower is better)
Translates to: EGRSPENSRRSA*SPAAHPSPATP
Trigger: AGGGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCTCAGGGCTCCTGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 72 bp GGTTGGCTCCTCGCTCTCCAATCTCCGTCAGGTCGCTaGTGGGAAGAATGGCCAGGTCAGGCCTCAGGCAGC +
Preference number: 3 (lower is better)
Translates to: GWLLALQSPSGR*WEEWPGQASGS
Trigger: GCTGCCTGAGGCCTGACCTGGCCATTCTTCCCAGCAGCGACCTGACGGAGATTGGAGAGCGAGGAGCCAACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp GACAGGATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 3 (lower is better)
Translates to: DRMSLVRQKIHTTLRREAESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...TGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATCCTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 72 bp GGAGGCGGCAGAGGGGGCTGTCGGAGGGCCCACTATTaGCACACGTCTTCCTTTGGACACCCAGAAAACCTG +
Preference number: 3 (lower is better)
Translates to: GGGRGGCRRAHY*HTSSFGHPENL
Trigger: CAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCCCTCTGCCGCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 72 bp TCCTCTGTAAGCGCAGGTGGCCCAGGTGGATGTGCTTaGCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCAC +
Preference number: 3 (lower is better)
Translates to: SSVSAGGPGGCA*LLPLRDWAARH
Trigger: GTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 72 bp AGTGTCCTCTGTAAGCGCAGGTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCG +
Preference number: 3 (lower is better)
Translates to: SVLCKRRWPRWM*LPSSSSGLGRS
Trigger: CGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp CCAGGTGGATGTGCTTGCCTTCTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCAGGAGGAGGTGGCCTT +
Preference number: 3 (lower is better)
Translates to: PGGCACLLPLRD*AARHCPGGGGL
Trigger: AAGGCCACCTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 72 bp AATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAGGGAATGGCAATGCTC +
Preference number: 3 (lower is better)
Translates to: NRERQGFGRRTR*GARPRQGMAML
Trigger: GAGCATTGCCATTCCCTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR TCA 72 bp AGACTCGTGCTTGGACAGAGACCACACGTCTTCCATTaGGAGCTCCCCCTTCTTGTGGGCCACACGGGCCAG +
Preference number: 3 (lower is better)
Translates to: RLVLGQRPHVFH*ELPLLVGHTGQ
Trigger: CTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR-3UTR CAA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTCGGAGGGCCCACTATaGCCACACGTCTTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: APQHKGGLREHTKPHSNQSEGPL*PHVFLW
Trigger: CCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 72 bp ATAGGGCTTCGAAGGATCCTTCGGAAAAGCTCGTCATaGAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACA +
Preference number: 3 (lower is better)
Translates to: IGLRRILRKSSS*SREEARSVPLT
Trigger: TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAGGATCCTTCGAAGCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp ACTGGAACAGCCCCGTTAACTGGACAGCATAAGAGATaGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGT +
Preference number: 3 (lower is better)
Translates to: TGTAPLTGQHKR*RDPHRLGESAR
Trigger: ACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCTGTCCAGTTAACGGGGCTGTTCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGA +
Preference number: 3 (lower is better)
Translates to: VADFEGRERERLCDDCGESWLQG*EPTGLG
Trigger: TCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACT...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR TCA 72 bp GGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCACGAAATCCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: GERERETVRRLR*ERKTDPRNPEP
Trigger: GGGCTCAGGATTTCGTGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR TCA 72 bp CCTCACGTGAAGCAACTCAGTAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACCTCGGCACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: PHVKQLSKMAVQ*SLFPHTSALME
Trigger: CTCCATCAGTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCTTCACGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 72 bp GCCCTGTATGCTGGACGTGATGTGGGAGAGGAAAGGTaGCTGCGTGATATTGTCCAGACGCTTCAGCTCCCG +
Preference number: 3 (lower is better)
Translates to: ALYAGRDVGEER*LRDIVQTLQLP
Trigger: CGGGAGCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTCCAGCATACAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 72 bp ACCAGTTTACCCTCTTGGATCTCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGCAGGTGGCCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: TSLPSWISRSML*SVLCKRRWPRW
Trigger: CCACCTGGGCCACCTGCGCTTACAGAGGACACTGCACAGCATCGATCTGGAGATCCAAGAGGGTAAACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 72 bp GGGCCCCACTGCCACAAGGAACCACGGGAAGACTCCTaGGATCATTCCCACACAGAAGAACACCAGGATAAC +
Preference number: 3 (lower is better)
Translates to: GPHCHKEPREDS*DHSHTEEHQDN
Trigger: GTTATCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTGTGGCAGTGGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp CTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGCACCGTGAAACCACCA +
Preference number: 3 (lower is better)
Translates to: LSEGPLLPHVFL*TPRKPGTVKPP
Trigger: TGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 72 bp GTGCCACCTCAAAAAGCAGCAGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: VPPQKAAVGSRA*NQQVLELESSV
Trigger: CACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAGGTGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 72 bp ATAGAATCGGGAACTGTCGTTGGACAGAAGGACCGATaGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: IESGTVVGQKDR*GVKLHHLSLGQ
Trigger: CTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp GCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCTCATCCTTCCAGCTGTaGCCAAAATCCATCGACCCC +
Preference number: 3 (lower is better)
Translates to: AVSKGRLKGQQVVALGSFSSFQL*PKSIDP
Trigger: GGGGTCGATGGATTTTGGCAACAGCTGGAAGGATGA...GAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp CCTCGAGCAGAGTTAGCATTCACCAAGAGAGAGCACTaGAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGC +
Preference number: 3 (lower is better)
Translates to: PRAELAFTKREH*RRRPSLADLQC
Trigger: GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAATGCTAACTCTGCTCGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp GCCAGCACCATAATCCTATCGGAGCCTAGAACCGTGTaGAGGCGATGGGCAATGGTCAGCATGGTACAGTCT +
Preference number: 3 (lower is better)
Translates to: ASTIILSEPRTV*RRWAMVSMVQS
Trigger: AGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAGGCTCCGATAGGATTATGGTGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp TTGGGGGTCAGCTTGGGCGAGTTCTGGATACTGGAGTaGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATC +
Preference number: 3 (lower is better)
Translates to: LGVSLGEFWILE*EESHAKVAFFI
Trigger: GATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp CTGGACAGCATAAGAGATGGCGAGACCCGCATAGGCTaGGGGAATCTGCCCGTGCATAAGAACGATCATCAG +
Preference number: 3 (lower is better)
Translates to: LDSIRDGETRIG*GNLPVHKNDHQ
Trigger: CTGATGATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp GACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGACGCTTCAGCTGGAACCAACAGGTCTaGGAGCTGGAGAGCTCTGTG +
Preference number: 3 (lower is better)
Translates to: DVMWERKGDCVILSRRFSWNQQV*ELESSV
Trigger: CACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCA...GCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGA +
Preference number: 3 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRSWLQG*EPTGLG
Trigger: TCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp AATCGGGAACTGTCGTTGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCGGAATGATAGAGAGTTaGCTTCGGAGGTCGGCAAGG +
Preference number: 3 (lower is better)
Translates to: NRELSLDRRTDGVSNSTTGMIES*LRRSAR
Trigger: CCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCC...GGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 72 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAAGGAAAACAGACCCAC +
Preference number: 3 (lower is better)
Translates to: VADFEGRERERL*DDCGEKGKQTH
Trigger: GTGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 72 bp TCATTTTGGGGGTCAGCTTGGGCGAGTTCTGGATACTaGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTT +
Preference number: 3 (lower is better)
Translates to: SFWGSAWASSGY*SGRSPMPRWHF
Trigger: AAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp ATCATTCCCACACAGAAGAACACCAGGATAACGTTCTaGATGAACATCTCGGCCTGGAACGGCAGCCGCACG +
Preference number: 3 (lower is better)
Translates to: IIPTQKNTRITF*MNISAWNGSRT
Trigger: CGTGCGGCTGCCGTTCCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGTGTTCTTCTGTGTGGGAATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp TGGATGGTGGCAAGGCCCTGTATGCTGGACGTGATGTaGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: WMVARPCMLDVM*ERKGDCVILSR
Trigger: TCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTCCAGCATACAGGGCCTTGCCACCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp TATCGGAGCCTAGAACCGTGTGCAGGCGATGGGCAATaGTCAGCATGGTACAGTCTGCAAATGCTTCTCGGA +
Preference number: 3 (lower is better)
Translates to: YRSLEPCAGDGQ*SAWYSLQMLLG
Trigger: TCCGAGAAGCATTTGCAGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAGGCTCCGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 72 bp ACTGCGGTGAGAAAGGAAAACAGACCCACGAAATCCTaGGCCCTGCCACTGAACTGTGGAGGTGTGGGAATA +
Preference number: 3 (lower is better)
Translates to: TAVRKENRPTKS*ALPLNCGGVGI
Trigger: TATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCTGTTTTCCTTTCTCACCGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR TCA 72 bp GAGATCAGAGCAGCCACCAGCCCTGTAGTGAAACAATaGCAGAAGCTCTTCTTGGGGGAAGCTGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: EIRAATSPVVKQ*QKLFLGEAGSM
Trigger: CATAGAGCCAGCTTCCCCCAAGAAGAGCTTCTGTCATTGTTTCACTACAGGGCTGGTGGCTGCTCTGATCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 72 bp GGTACTTTCCCTTGGGATGCTCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGGCATCAAGAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GTFPWDAPHPGF*AENAWRHQERG
Trigger: GCCTCTCTCTTGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 72 bp TTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTaGGGTGAGAAAGGAAAACAGACCCACGAAATCCTG +
Preference number: 3 (lower is better)
Translates to: FEGRERERLCDD*GEKGKQTHEIL
Trigger: CAGGATTTCGTGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 72 bp CAGACCCACGAAATCCTGAGCCCTGCCACTGAACTGTaGAGGTGTGGGAATAGGCAAATGAAAAAGTGCCAC +
Preference number: 3 (lower is better)
Translates to: QTHEILSPATEL*RCGNRQMKKCH
Trigger: GTGGCACTTTTTCATTTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CCA 72 bp AGTCCCCACCGGCGTCACCAAAACCTTGGATCATCTTaGTGTATAAATGTCAGCATCAGCTGGCTGGCAGGT +
Preference number: 3 (lower is better)
Translates to: SPHRRHQNLGSS*CINVSISWLAG
Trigger: ACCTGCCAGCCAGCTGATGCTGACATTTATACACCAAGATGATCCAAGGTTTTGGTGACGCCGGTGGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 72 bp AACACCAGGATAACGTTCTGGATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCAACTTCATCCATGTCT +
Preference number: 3 (lower is better)
Translates to: NTRITFWMNISA*NGSRTSTSSMS
Trigger: AGACATGGATGAAGTTGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp CTAGAACCGTGTGCAGGCGATGGGCAATGGTCAGCATaGTACAGTCTGCAAATGCTTCTCGGATGGTCTCTT +
Preference number: 3 (lower is better)
Translates to: LEPCAGDGQWSA*YSLQMLLGWSL
Trigger: AAGAGACCATCCGAGAAGCATTTGCAGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp CAGCAGCAAACATGGCATAGAATCGGGAACTGTCGTTaGACAGAAGGACCGATGGGGTGTCAAACTCCACCA +
Preference number: 3 (lower is better)
Translates to: QQQTWHRIGNCR*TEGPMGCQTPP
Trigger: TGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATTCTATGCCATGTTTGCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAACGCTGACCATTCAATaGATGACAGCAGTGACCACG +
Preference number: 3 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRTLTIQ*MTAVTT
Trigger: CGTGGTCACTGCTGTCATCAATTGAATGGTCAGCGT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACACACATTTTCAGATTTTaGCTTCCACAAGGTGTTCAG +
Preference number: 3 (lower is better)
Translates to: LRKSSSCSREEARSVPLTHIFRF*LPQGVQ
Trigger: CTGAACACCTTGTGGAAGCAAAAATCTGAAAATGTG...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAAGGAATGATAGAGAGTTaGCTTCGGAGGTCGGCAAGG +
Preference number: 3 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKGMIES*LRRSAR
Trigger: CCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCC...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR CAA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGAT +
Preference number: 3 (lower is better)
Translates to: APQHKGGLREHTKPHSNQSSVYW*KGSKFD
Trigger: ATCAAATTTGGACCCCTTCAACCAGTACACTGAAGA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATTCCCAAACAGGATGTaGTCTCTCAGAGTAGCATTG +
Preference number: 3 (lower is better)
Translates to: AWNQQVLELESSVQWPAIFPNRM*SLRVAL
Trigger: CAATGCTACTCTGAGAGACAACATCCTGTTTGGGAA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCATGCCCACCGCTCAGGTaGGCTCCTCGCTCTCCAATC +
Preference number: 3 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIACPPLR*APRSPI
Trigger: GATTGGAGAGCGAGGAGCCAACCTGAGCGGTGGGCA...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp AATCGGGAACTGTCGTTGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACA +
Preference number: 3 (lower is better)
Translates to: NRELSLDRRTDGVSNSTTFRIAL*KMWLPT
Trigger: TGTGGGCAACCACATCTTCAATAGTGCTATCCGGAA...GGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCACTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACC +
Preference number: 3 (lower is better)
Translates to: SARPISLILTPSILMQPPLKKQQ*APGLGT
Trigger: GGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAG...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 72 bp TTTGATCTGACAGTGCCACTGAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCA +
Preference number: 3 (lower is better)
Translates to: FDLTVPLNSTGS*GMIESLLRRSA
Trigger: TGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTCAGTGGCACTGTCAGATCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR TCA 72 bp GGCTCTAGCTATGCACAAGAGCTGCCGTTCCCCCACTaGGAAGTTATCCCCATTCTCCATCACTTCAGATTC +
Preference number: 3 (lower is better)
Translates to: GSSYAQELPFPH*EVIPILHHFRF
Trigger: GAATCTGAAGTGATGGAGAATGGGGATAACTTCTCAGTGGGGGAACGGCAGCTCTTGTGCATAGCTAGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR GCA 72 bp GTTCATGTTAACACACAACCGAGAAGCACAGTCCTGTaGAGAACTGGAGTCAGTTCCATTTCACCCCCACCC +
Preference number: 3 (lower is better)
Translates to: VHVNTQPRSTVL*RTGVSSISPPP
Trigger: GGGTGGGGGTGAAATGGAACTGACTCCAGTTCTGCACAGGACTGTGCTTCTCGGTTGTGTGTTAACATGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp GTTGCCTTGGGCTCCTTCCTTCCCATACCTTTAGAGTaGCATTTTTCAGCACTGGGTAATAGCATCAGCGCC +
Preference number: 3 (lower is better)
Translates to: VALGSFLPIPLE*HFSALGNSISA
Trigger: GGCGCTGATGCTATTACCCAGTGCTGAAAAATGGCACTCTAAAGGTATGGGAAGGAAGGAGCCCAAGGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp CTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTaGTTGGACAGAGACCACACGTCTTCCATTGAGAGC +
Preference number: 3 (lower is better)
Translates to: LSSLLQFTSEDS*LDRDHTSSIES
Trigger: GCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR GCA 72 bp TGCTGGCATAGTACTGCATATGAGGATTGTCCTTCATaGTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCA +
Preference number: 3 (lower is better)
Translates to: CWHSTAYEDCPS*CHSPRSRSLES
Trigger: TGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAATCCTCATATGCAGTACTATGCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp GATAGGAGTTGTGAGAGAGGTGCAAAGATGAGACACTaGATCAAGACCAGGGAGACAAGCCTAGGGCGTACA +
Preference number: 3 (lower is better)
Translates to: DRSCERGAKMRH*IKTRETSLGRT
Trigger: TGTACGCCCTAGGCTTGTCTCCCTGGTCTTGATCCAGTGTCTCATCTTTGCACCTCTCTCACAACTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp GACTTGAGATGTTTCCGGATAGCACTATTGAAGATGTaGTTGCCCACATGGGCATCTAAGGCACTGAGGGGG +
Preference number: 3 (lower is better)
Translates to: DLRCFRIALLKM*LPTWASKALRG
Trigger: CCCCCTCAGTGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp ATAATCCTATCGGAGCCTAGAACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTACAGTCTGCAAATGCT +
Preference number: 3 (lower is better)
Translates to: IILSEPRTVCRR*AMVSMVQSANA
Trigger: AGCATTTGCAGACTGTACCATGCTGACCATTGCCCATCGCCTGCACACGGTTCTAGGCTCCGATAGGATTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: LTETVSDTRTEGRSPENSKSCLK*QTLRGE
Trigger: CTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTCAGCACAAAGGGGGTTaGCGGGAACACACCAAACCA +
Preference number: 3 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVQHKGG*REHTKP
Trigger: TGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTG...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR GCA 72 bp TCTCACCCACTCATAGCACTGCAAGACACATCTGCCTaGACCGACTGTCAGTTCATGTTAACACACAACCGA +
Preference number: 3 (lower is better)
Translates to: SHPLIALQDTSA*TDCQFMLTHNR
Trigger: TCGGTTGTGTGTTAACATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGTGCTATGAGTGGGTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp GTGCTCTCACCCACTCATAGCACTGCAAGACACATCTaGCTGCACCGACTGTCAGTTCATGTTAACACACAA +
Preference number: 3 (lower is better)
Translates to: VLSPTHSTARHI*LHRLSVHVNTQ
Trigger: TTGTGTGTTAACATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGTGCTATGAGTGGGTGAGAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR GCA 72 bp AAACAGAGTGAACGTCAAAGGCTCTCTTGTCTACTCTaGATCAGTACAGACTGGGGAAAACCACGGCTGCCA +
Preference number: 3 (lower is better)
Translates to: KQSERQRLSCLL*ISTDWGKPRLP
Trigger: TGGCAGCCGTGGTTTTCCCCAGTCTGTACTGATGCAGAGTAGACAAGAGAGCCTTTGACGTTCACTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 72 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTaGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCA +
Preference number: 3 (lower is better)
Translates to: LSRASQIWSSVY*LKGSKFDLTVP
Trigger: TGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR CAA 90 bp GGCAGGGAATGGCAATGCTCTAAAGAAAAGAGACTTCGTCAACAGGGAGGAGTCAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: GREWQCSKEKRLRQQGGVKSCLK*QTLRGE
Trigger: CTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTT...GACTCCTCCCTGTTGACGAAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR-3UTR CAA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAACAAACAGAACTGTCTaGGACTTGAGATGTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LTETVSDTRTEGRSPENSTNRTV*DLRCFR
Trigger: CCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 72 bp ACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAGAATGAAATGCTACTC +
Preference number: 3 (lower is better)
Translates to: TSSFGHPENLAP*NHQLEKNEMLL
Trigger: GAGTAGCATTTCATTCTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCATTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 3 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGCAGCAGGTGGTTGCCTaGGGCTCCTTCCTTCCCATA +
Preference number: 3 (lower is better)
Translates to: IETYRVELYRTSHLTGHLQQVVA*GSFLPI
Trigger: TATGGGAAGGAAGGAGCCCAAGGCAACCACCTGCTG...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTGAACAGCACCGGCTCTaGAGGAATGATAGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFEQHRL*RNDREF
Trigger: AAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTC...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR CAA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCTTTCTCAGGGCTTATTaGCCACAGACCTGCCAAACA +
Preference number: 3 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSFLRAY*PQTCQT
Trigger: TGTTTGGCAGGTCTGTGGCAAATAAGCCCTGAGAAA...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGGAACAGCACCGGCTCTaGAGGAATGATAGAGAGTTT +
Preference number: 3 (lower is better)
Translates to: SSKIRILQWRSRALAMHKEQHRL*RNDREF
Trigger: AAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTC...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR CAA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCAACCAGTTTACCCTCTaGGATCTCCAGATCGATGCT +
Preference number: 3 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRNQFTL*DLQIDA
Trigger: AGCATCGATCTGGAGATCCAAGAGGGTAAACTGGTT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR GCA 72 bp CACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTGAATGACAGACAAAAA +
Preference number: 3 (lower is better)
Translates to: HPSTQVPYSKGD*SCKSELNDRQK
Trigger: TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR CCA 72 bp CTTACCAAAACCATGAACCTCCAGCTTACCCACATATaGAAAACGCACAGTACAAGCAGTACTACTGCTCCG +
Preference number: 3 (lower is better)
Translates to: LTKTMNLQLTHI*KTHSTSSTTAP
Trigger: CGGAGCAGTAGTACTGCTTGTACTGTGCGTTTTCCATATGTGGGTAAGCTGGAGGTTCATGGTTTTGGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRLKLQT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAA...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCATTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 3 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACTTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 3 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHLGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGAGGAAGGCTGAACTCTaGGCGAGAGATTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMRKAEL*ARDSAQ
Trigger: CTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCCT...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCACGTCAAAGGCTCTCTaGTCTACTCTGCATCAGTAC +
Preference number: 3 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCTSKAL*STLHQY
Trigger: GTACTGATGCAGAGTAGACAAGAGAGCCTTTGACGT...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 72 bp AAAAGGCCCCAAAGCATCTCTGTAAGTGTAGCAATGTaGCTACACAGGACCACACTGTTAGAGATTCTGGTA +
Preference number: 3 (lower is better)
Translates to: KRPQSISVSVAM*LHRTTLLEILV
Trigger: TACCAGAATCTCTAACAGTGTGGTCCTGTGTAGCCACATTGCTACACTTACAGAGATGCTTTGGGGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCLKLQT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR-3UTR CAA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 3 (lower is better)
Translates to: TLLKMAGATGALSCEELPVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp GGTACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTAGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 3 (lower is better)
Translates to: GTLLKMAGATGALSCEELVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...TAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGTCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGAT +
Preference number: 3 (lower is better)
Translates to: SSKIRILQWRSRALAMHKSSVYW*KGSKFD
Trigger: ATCAAATTTGGACCCCTTCAACCAGTACACTGAAGA...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
3UTR-3UTR CAA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGCTATTGAAGATGTGGTaGCCCACATGGGCATCTAAG +
Preference number: 3 (lower is better)
Translates to: KSETHKPIRNCCAKDKIELLKMW*PTWASK
Trigger: CTTAGATGCCCATGTGGGCAACCACATCTTCAATAG...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR TCA 72 bp TTGCCATGCATCTTAGGCACATACTTACCAAAACCATaGACCTCCAGCTTACCCACATATGGAAAACGCACA +
Preference number: 3 (lower is better)
Translates to: LPCILGTYLPKP*TSSLPTYGKRT
Trigger: TGTGCGTTTTCCATATGTGGGTAAGCTGGAGGTTCATGGTTTTGGTAAGTATGTGCCTAAGATGCATGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp TCGCAAAGCCTGCATATGGTGCTACCCAGAGGAATGAATTCTATGAGATCAGAGTTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 3 (lower is better)
Translates to: SQSLHMVLPRGMNSMRSELLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...CTCTGATCTCATAGAATTCATTCCTCTGGGTAGCACCATATGCAGGCTTTGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTTTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 3 (lower is better)
Translates to: TLLKMAGATGALSCEELPLGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTATTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 3 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLLGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGAGGAAGGCTGAACTCTaGGCGAGAGATTCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRRKAEL*ARDSAQ
Trigger: CTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCCT...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp AACTTCATCCATGTCTTTGGAAAACCTGTTGAGAATCCTCCCTGTGGGGGTCGTCTGTTCAGCACAGAGTaGTATCTTTCTTCATCATAT +
Preference number: 3 (lower is better)
Translates to: NFIHVFGKPVENPPCGGRLFSTE*YLSSSY
Trigger: ATATGATGAAGAAAGATACAACTCTGTGCTGAACAG...ACGACCCCCACAGGGAGGATTCTCAACAGGTTTTCCAAAGACATGGATGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CCA 72 bp AGAAAACTTGAGACTGTTAGCATAGCTGTCTGGCTGTaGAAAGCATTCCCAGTGAATAAACATTACCTTACC +
Preference number: 3 (lower is better)
Translates to: RKLETVSIAVWL*KAFPVNKHYLT
Trigger: GGTAAGGTAATGTTTATTCACTGGGAATGCTTTCCACAGCCAGACAGCTATGCTAACAGTCTCAAGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CCA 72 bp ACTGGAAGAAAACTTGAGACTGTTAGCATAGCTGTCTaGCTGTGGAAAGCATTCCCAGTGAATAAACATTAC +
Preference number: 3 (lower is better)
Translates to: TGRKLETVSIAV*LWKAFPVNKHY
Trigger: GTAATGTTTATTCACTGGGAATGCTTTCCACAGCCAGACAGCTATGCTAACAGTCTCAAGTTTTCTTCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCTTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 3 (lower is better)
Translates to: QELLYSTSPLPQIFRFISLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR-3UTR CAA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 3 (lower is better)
Translates to: NTAILKILKNSFCHWFHYVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR-3UTR CAA 90 bp GGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACAAAGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 3 (lower is better)
Translates to: GILLGLFKSLHLKINLDKVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...TTTGTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR CCA 72 bp ATGCTAATTCTTTATACACAGATCATAGGTGAGGCCTaGTCTTTTAGAACTGTCTTAATCCAAAAAGGCCCC +
Preference number: 3 (lower is better)
Translates to: MLILYTQIIGEA*SFRTVLIQKGP
Trigger: GGGGCCTTTTTGGATTAAGACAGTTCTAAAAGACCAGGCCTCACCTATGATCTGTGTATAAAGAATTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR TCA 72 bp ACCAATCAGATTTTTGCCAAGTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAGATTCCAAGAACTACT +
Preference number: 3 (lower is better)
Translates to: TNQIFAKSQEIT*SNRRLQIPRTT
Trigger: AGTAGTTCTTGGAATCTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGACTTGGCAAAAATCTGATTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR TCA 72 bp TCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTaGAGCATTGCAGTAACATACATTGAAACATACAGA +
Preference number: 3 (lower is better)
Translates to: SSKSISQTLYSR*SIAVTYIETYR
Trigger: TCTGTATGTTTCAATGTATGTTACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCGAACTCACGGCGCTCTaGATGGTCTCCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPELTAL*MVSSRP
Trigger: TGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTC...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCAGCGAGGACTTCCCTaGTCCTGTCCGCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPQRGLP*SCPPHN
Trigger: ATTGTGGGGCGGACAGGATCAGGGAAGTCCTCGCTG...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCGGAAAAGCTCGTCATaGAGCCGGGAGGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPRKSSS*SREEAR
Trigger: GCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCG...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TGCCTCCAGGCACTTGGTATGTTCCCGGTGCTGGCTCACCAGCCCGGGCCACACAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: CLQALGMFPVLAHQPGPHSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...GTGTGGCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTGCCAGCACCGCCTaGTGCTCAGTGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDSASTA*CSVRCS
Trigger: GCTGCAGCGCACTGAGCATCAGGCGGTGCTGGCAGA...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GTGCTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCACTGTCCAGGAGGAGTCTGCCAGCACCGCCTaGTGCTCAGTGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: VLAFFLFGTGPLVTVQEESASTA*CSVRCS
Trigger: GCTGCAGCGCACTGAGCATCAGGCGGTGCTGGCAGA...CTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGAGGCCCGGGCAAGGCTaGTCCTCTGGCGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKRPGQG*SSGAAH
Trigger: GTGGGCAGCGCCAGAGGATCAGCCTTGCCCGGGCCT...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCGGAGGAGTCAGCCCTTaGCAGCGACCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPGGVSP*QRPCSL
Trigger: CAGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCC...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGAACGATGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RDGETRIGWGNLPVHKNDGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...ATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCGCTGCCAACGGCTGCTaGCTCAAACATTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPAANGC*LKHSLP
Trigger: GGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGC...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGAACTCACGGCGCTCTaGATGGTCTCCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDELTAL*MVSSRP
Trigger: TGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGTCTCCAGCCACCCCTaGAGCGGCCGTGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPVSSHP*SGRGEA
Trigger: CGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGAC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGCTCCAGCCAGCAGGCTaGCAACGGCTGCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWLQPAG*QRLLPQ
Trigger: TTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAG...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCTGTGAAAGCCTGTGCTaGTGTCAGATCGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPCESLC*CQIEAQ
Trigger: CTGGGCTTCGATCTGACAGCAGCACAGGCTTTCACA...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCACTGTGAAAGCCTGTaGTGCTGTCAGATCGAAGCC +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPHCESL*CCQIEA
Trigger: GGCTTCGATCTGACAGCAGCACAGGCTTTCACAGTG...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGCCGCCTGATGCTCAGTaGGCTGCAGCTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWPPDAQ*AAAASP
Trigger: AGGTGAGGCAGCTGCAGCGCACTGAGCATCAGGCGG...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp GGGAGGCGGCAGAGGGGGCTGTCGGAGGGCCCACTATaGCCACACGTCTTCCTTTGGACACCCAGAAAACCT +
Preference number: 4 (lower is better)
Translates to: GRRQRGLSEGPL*PHVFLWTPRKP
Trigger: AGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCCCTCTGCCGCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp GTCCTCTGTAAGCGCAGGTGGCCCAGGTGGATGTGCTaGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCA +
Preference number: 4 (lower is better)
Translates to: VLCKRRWPRWMC*PSSSSGLGRSS
Trigger: TGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCGCTTACAGAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GGCATCAAGAGAGAGGCCCTCGGCTCGGGCTGCTGTTTCCAAGGCATCTTGGCACCACGCTCCCGAGCATaGGCCCTGCAGCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: GIKREALGSGCCFQGILAPRSRA*ALQQNK
Trigger: CTTGTTTTGCTGCAGGGCTCATGCTCGGGAGCGTGG...TGCCAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGCCTCTCTCTTGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGCAGCGAGGACTTCCCTaGTCCTGTCCGCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWQRGLP*SCPPHN
Trigger: ATTGTGGGGCGGACAGGATCAGGGAAGTCCTCGCTG...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTGCTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCACTGTCCAGGAGGAGGCTGCCAACGGCTGCTaGCTCAAACATTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: VLAFFLFGTGPLVTVQEEAANGC*LKHSLP
Trigger: GGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGC...CTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAACTCCAGCCAGCAGGCTaGCAACGGCTGCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKLQPAG*QRLLPQ
Trigger: TTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAG...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCGAGGATTGTCCTTCATaGTGTCACTCACCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPEDCPS*CHSPRS
Trigger: AGACCTCGGTGAGTGACAGCATGAAGGACAATCCTC...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCTCGGTACCTCATCTCTaGGTTCTCAAAGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPSVPHL*VLKGHL
Trigger: GAGGTGACCTTTGAGAACGCAGAGATGAGGTACCGA...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAATCTGCCAGCACCGCCTaGTGCTCAGTGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQSASTA*CSVRCS
Trigger: GCTGCAGCGCACTGAGCATCAGGCGGTGCTGGCAGA...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGGCCCGGGCAAGGCTaGTCCTCTGGCGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSRPGQG*SSGAAH
Trigger: GTGGGCAGCGCCAGAGGATCAGCCTTGCCCGGGCCT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGCAGCGAGGACTTCCCTaGTCCTGTCCGCCCCACAAT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALQRGLP*SCPPHN
Trigger: ATTGTGGGGCGGACAGGATCAGGGAAGTCCTCGCTG...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCCTGAGCCCTGCCACTaGACTGTGGAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATPEPCH*TVEVWE
Trigger: TTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAGACCCACGAAATCCTaGGCCCTGCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDRPTKS*ALPLNC
Trigger: ACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGGAATTCCTGCGCCCCTaGTCCAGGACAACCGCGCCA +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGEEFLRP*SRTTAP
Trigger: TGGCGCGGTTGTCCTGGAGCAGGGGCGCAGGAATTC...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265586.10
ENST00000334444.11
CDS-3UTR GCA 90 bp CTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCATGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LVRQKIHTTLRREAASGPCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...TGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp CACACGATGGACAGGATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: HTMDRMSLVRQKIHTTLRALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...GCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCTGATCCTCTGGCGCTaGCCACCGCTCAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSLILWR*PPLRLA
Trigger: AGCCAACCTGAGCGGTGGGCAGCGCCAGAGGATCAG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGCGGAAAAGCTCGTCATaGAGCCGGGAGGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKRKSSS*SREEAR
Trigger: GCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCG...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGCGAGTTCTGGATACTaGAGTGGGAGGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDASSGY*SGRSPM
Trigger: CATGGGACTCCTCCCACTCCAGTATCCAGAACTCGC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATLPLRD*AARHCP
Trigger: TGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGCTCTGTAAGCGCAGGTaGCCCAGGTGGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWLCKRR*PRWMCL
Trigger: CAAGCACATCCACCTGGGCCACCTGCGCTTACAGAG...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGGAGACCCGCATAGGCTaGGGGAATCTGCCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQETRIG*GNLPVH
Trigger: ATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTC...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGAGACCCGCATAGGCTaGGGGAATCTGCCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSETRIG*GNLPVH
Trigger: ATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTC...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACATCCTTCATCTTCTCTaGGTGGAGGTTCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDILHLL*VEVPGL
Trigger: GAGCCCTGGAACCTCCACTCAGAGAAGATGAAGGAT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAAGCCCAGGGTCATATaGACAGAGAAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDKPRVI*TEKVTT
Trigger: CGTGGTGACCTTCTCTGTTCATATGACCCTGGGCTT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCTCAACCACCAGGTGCTaGAGGCGGTGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATSTTRC*RRCCLH
Trigger: ATGTAGGCAGCACCGCCTTCAGCACCTGGTGGTTGA...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGAGGAGTCAGCCCTTaGCAGCGACCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSGGVSP*QRPCSL
Trigger: CAGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCC...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCGGAGGAGTCAGCCCTTaGCAGCGACCTTGTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATGGVSP*QRPCSL
Trigger: CAGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCC...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGCCAGCCATAGGAACCTaGGGCAGTGGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALPAIGT*GSGTLC
Trigger: ACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGG...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGAGGCCCTCGGCTCGGGCTGCTGTTTCCAAGGCATCTTGGCATTCCAACTGTGGCGGGAGGCTTGCTTaGAGCTGGGAGTTCAACAAC +
Preference number: 4 (lower is better)
Translates to: ERPSARAAVSKASWHSNCGGRLA*SWEFNN
Trigger: GTTGTTGAACTCCCAGCTTCAAGCAAGCCTCCCGCC...ACAGTTGGAATGCCAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGCCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp AAGCCAGCCAGCTGCGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTGCTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: KPASCVIIRHTMDRMSLVLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...CACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCGCTGCCAACGGCTGCTaGCTCAAACATTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATAANGC*LKHSLP
Trigger: GGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGC...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACCCTTTCTCTTCCAGCTaGACAAGCTGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDPFSSS*TSCPSS
Trigger: AGAGGAAGGGCAGCTTGTGCAGCTGGAAGAGAAAGG...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAATGGGCTTCGCCCCGCTaGTCTCCTGACAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKWASPR*SPDRNS
Trigger: ACTGTTTCTGTCAGGAGAGCAGCGGGGCGAAGCCCA...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCCTGAGGCGGGAGGCTTaGTTGAAGCTGGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: DEPGAAEDPHNPSQGSSVLRREA*LKLGVQ
Trigger: TTGAACTCCCAGCTTCAAGCAAGCCTCCCGCCTCAG...GACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGACACGTTCATCCGTaGCGGCCACGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSGHVHP*RPRIFS
Trigger: GGAGAAAATGCGTGGCCGCCACGGATGAACGTGTCC...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTTCTGGATACTGGAGTaGGAGGAGTCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDFWILE*EESHAK
Trigger: CTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAA...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCGCAGGTGGCCCAGGTaGATGTGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSRRWPR*MCLPSS
Trigger: GGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCATCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: LVRQKIHTTLRREAASGPSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...TGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: HHGLEVATLNSKTQTLSGSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...CCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGAGGATAAAAACAGCTaGTCCCAGGAAGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDEDKNS*SQEACW
Trigger: CCAACAGGCTTCCTGGGATCAGCTGTTTTTATCCTC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGAGCCACACCCACAGTaGTGCTCTGGAAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSEPHPQ*CSGSTQ
Trigger: CTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGAAGCCCAGGGTCATATaGACAGAGAAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWKPRVI*TEKVTT
Trigger: CGTGGTGACCTTCTCTGTTCATATGACCCTGGGCTT...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGTCAACCACCAGGTGCTaGAGGCGGTGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKSTTRC*RRCCLH
Trigger: ATGTAGGCAGCACCGCCTTCAGCACCTGGTGGTTGA...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGCTTTCAGGATCAGCATaGCTGCCATGGAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQLSGSA*LPWRGR
Trigger: ACGCCCTCTCCATGGCAGTCATGCTGATCCTGAAAG...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCTCGCAGCGTGCCCTTaGCAAAGACAACTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATLAACP*QRQLLE
Trigger: TTCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGACAATGTGCAGGACTaGAAAGAGGATGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDDNVQD*KEDDKG
Trigger: CCCCTTGTCATCCTCTTTTCAGTCCTGCACATTGTC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCTGCCGTTCCCCCACTaGGAAGTTATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATLPFPH*EVIPIL
Trigger: GAGAATGGGGATAACTTCTCAGTGGGGGAACGGCAG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGCTGCCGTTCCCCCACTaGGAAGTTATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALLPFPH*EVIPIL
Trigger: GAGAATGGGGATAACTTCTCAGTGGGGGAACGGCAG...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGGTAGGAGGACGCGATaGGGGGCCCGCCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERGRRTR*GARPRQ
Trigger: CTGCCTGGGGCGGGCCCCTCATCGCGTCCTCCTACC...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGAACTCACGGCGCTCTGCATGGTCTCCAGCCGCCCACCCGTCTCCAGCCACCCCCAGCTAGAGAAGAATaGAATGCTACTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: RTHGALHGLQPPTRLQPPPAREE*NATLPT
Trigger: TGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGG...GGGTGGCTGGAGACGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAAGACCCACGAAATCCTaGGCCCTGCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKRPTKS*ALPLNC
Trigger: ACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCA +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALVRRLR*ERKTDP
Trigger: TGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCAC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCACCCGAGCATGAGCCCTaGAGCAAAACAAGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LVRQKIHTTLRREAASGPPEHEP*SKTSLY
Trigger: ATAAAGGCTTGTTTTGCTGCAGGGCTCATGCTCGGG...TGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGAATTCCTGCGCCCCTaGTCCAGGACAACCGCGCCA +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWREFLRP*SRTTAP
Trigger: TGGCGCGGTTGTCCTGGAGCAGGGGCGCAGGAATTC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265586.10
ENST00000334444.11
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGTGGGAGGAGTCCCATaGCAAGGTGGCATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDVGGVP*QGGIFH
Trigger: ATGAAAAATGCCACCTTGGCATGGGACTCCTCCCAC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCCAGGTGGATGTGCTTaGCTTCTTCCTCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSPGGCA*LLPLRD
Trigger: GTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQWPRWM*LPSSSS
Trigger: CGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTCTCCGTCAGGTCGCTaGTGGGAAGAATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSSPSGR*WEEWPG
Trigger: ACCTGGCCATTCTTCCCAGCAGCGACCTGACGGAGA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAACATAATAACCAGGAATaGCAAGGGGCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKHNNQE*QGAPSS
Trigger: GCTGCTGGGGGCCCCTTGGCATTCCTGGTTATTATG...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGGCTATGCACAAGAGCTaGCGTTCCCCCACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQAMHKS*RSPTEK
Trigger: CTTCTCAGTGGGGGAACGGCAGCTCTTGTGCATAGC...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGAGCCTAGAACCGTGTaGAGGCGATGGGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSEPRTV*RRWAMV
Trigger: GACCATTGCCCATCGCCTGCACACGGTTCTAGGCTC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCGGAGGGCCCACTATTaGCACACGTCTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSRRAHY*HTSSFG
Trigger: TCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTGGGCTTCGCCCCGCTaGTCTCCTGACAGAAACAGT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSWASPR*SPDRNS
Trigger: ACTGTTTCTGTCAGGAGAGCAGCGGGGCGAAGCCCA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGAGCACAAAGGGGGTTTaGGGGAACACACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWSTKGV*GNTPNH
Trigger: GTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCT...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TGCCTCCAGGCACTTGGTATGTTCCCGGTGCTGGCTCACCAGCCCGGGCCACACTTCTCAGGGCTTATTTaGCACAGACCTGCCAAACAT +
Preference number: 4 (lower is better)
Translates to: CLQALGMFPVLAHQPGPHFSGLI*HRPAKH
Trigger: ATGTTTGGCAGGTCTGTGGCAAATAAGCCCTGAGAA...GTGTGGCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAAGTGCCTGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCGCGTCCCAGAAGTGCTaGTTCTCTCCCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATASQKC*FSPSHF
Trigger: GAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGC...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACACGATGGACAGGATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: HTMDRMSLVRQKIHTTLRQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...GCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp AGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGAACGATGGACACGTTCATCCGTaGCGGCCACGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RDGETRIGWGNLPVHKNDGHVHP*RPRIFS
Trigger: GGAGAAAATGCGTGGCCGCCACGGATGAACGTGTCC...ATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAAGAAGGTCACCACGCTaGCAATCACCACCACAATGG +
Preference number: 4 (lower is better)
Translates to: LRKSSSCSREEARSVPLTRRSPR*QSPPQW
Trigger: CCATTGTGGTGGTGATTGCCAGCGTGGTGACCTTCT...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTCTGTAAGCGCAGGTaGCCCAGGTGGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENLCKRR*PRWMCL
Trigger: CAAGCACATCCACCTGGGCCACCTGCGCTTACAGAG...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGCAAGGCTGATCCTCTaGCGCTGCCCACCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETARLIL*RCPPLR
Trigger: CCTGAGCGGTGGGCAGCGCCAGAGGATCAGCCTTGC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGATGTGGTTGCCCACATaGGCATCTAAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWMWLPT*ASKALR
Trigger: CCTCAGTGCCTTAGATGCCCATGTGGGCAACCACAT...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCGCAGGCGATGGGCAATaGTCAGCATGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATAGDGQ*SAWYSL
Trigger: CAGACTGTACCATGCTGACCATTGCCCATCGCCTGC...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATTVCRR*AMVSMV
Trigger: TACCATGCTGACCATTGCCCATCGCCTGCACACGGT...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGTCTCCAGCCACCCCTaGAGCGGCCGTGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGVSSHP*SGRGEA
Trigger: CGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGAC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GTGCTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCACTGTCCAGGAGGAGTCAAAAAGCAGCAGTTaGCTCCAGGGCTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: VLAFFLFGTGPLVTVQEESKSSS*LQGLEP
Trigger: TGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGA...CTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 72 bp AAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATaGAGAGCTCCCCCTTCTTGTGGGCCACACGGGCCA +
Preference number: 4 (lower is better)
Translates to: KTRAWTETTRLP*RAPPSCGPHGP
Trigger: TGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR CAA 72 bp ACCTCTCCCTCCTGGGGCCAGTCAGGGGAGGGAGCCTaGTTCTTAATTCTGGCAGGTGCTTCCAAGGACAGA +
Preference number: 4 (lower is better)
Translates to: TSPSWGQSGEGA*FLILAGASKDR
Trigger: TCTGTCCTTGGAAGCACCTGCCAGAATTAAGAACAAGGCTCCCTCCCCTGACTGGCCCCAGGAGGGAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAAGCCAGCCAGCTGCGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: EASQLRDHQAHDGQDEPGPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...ACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTCCTCTCCACCGAGGTaGATCGAGCTTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSSSPPR*IELLSQ
Trigger: CTGAGACAGAAGCTCGATTCACCTCGGTGGAGAGGA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGAAGGGGTCCAAATTTaGTCTGACAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDEGVQI*SDSATE
Trigger: TTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSENLAP*NHQLEK
Trigger: CTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTC...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SNSVRWRCSEACSHTPRHCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...GTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: LRKSSSCSREEARSVPLTALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCAATGCCCAAGTCAGTaGAAGCGACCAAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSQCPSQ*KRPRPH
Trigger: GTGCGGTCTTGGTCGCTTGCACTGACTTGGGCATTG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCAATGCCCAAGTCAGTaGAAGCGACCAAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENQCPSQ*KRPRPH
Trigger: GTGCGGTCTTGGTCGCTTGCACTGACTTGGGCATTG...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGTCACCTTCTCTTTCTTaGCCCTGGAAGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWSPSLS*PWKPSC
Trigger: ACAAGAGGGCTTCCAGGGGCAAGAAAGAGAAGGTGA...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCCAGGTGGATGTGCTTaGCTTCTTCCTCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSPGGCA*LLPLRD
Trigger: GTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTGGAGAGGGCGTAGATaGTGGCATAGTACTGCATAT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDWRGRR*WHSTAY
Trigger: ATATGCAGTACTATGCCAGCATCTACGCCCTCTCCA...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACGGAAAAGCTCGTCATaGAGCCGGGAGGAAGCTCGC +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRRKSSS*SREEAR
Trigger: GCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAACCACGGGAAGACTCCTaGGATCATTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKPREDS*DHSHTE
Trigger: TTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGG...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGGGGGAATCTGCCCGTaGATAAGAACGATCATCAGC +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALGGICP*IRTIIS
Trigger: GCTGATGATCGTTCTTATGCACGGGCAGATTCCCCC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAGCTTCTGTCTCAGATaGCAGTCTGACCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDSFCLR*QSDRKL
Trigger: CAGTTTACGGTCAGACTGGCATCTGAGACAGAAGCT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAGCACCGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCGCTATGCACAAGAGCTaGCGTTCCCCCACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QHRLLRNDREFASEVGKAAMHKS*RSPTEK
Trigger: CTTCTCAGTGGGGGAACGGCAGCTCTTGTGCATAGC...GGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR GCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSERERL*DDCGEK
Trigger: TTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTC...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTTTCTGGATACTGGAGTaGGAGGAGTCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSFWILE*EESHAK
Trigger: CTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAA...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGACTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGLPLRD*AARHCP
Trigger: TGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAG...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCGCAGGTGGCCCAGGTaGATGTGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKRRWPR*MCLPSS
Trigger: GGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAATGTGGTTGCCCACATaGGCATCTAAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKMWLPT*ASKALR
Trigger: CCTCAGTGCCTTAGATGCCCATGTGGGCAACCACAT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGACAGCATAAGAGATaGCGAGACCCGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSGQHKR*RDPHRL
Trigger: CAGCCTATGCGGGTCTCGCCATCTCTTATGCTGTCC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACGACACCCAGAAAACCTaGCACCGTGAAACCACCAGC +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENDTQKT*HRETTS
Trigger: GCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTC...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAGTCTCCAGCCACCCCTaGAGCGGCCGTGGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIAVSSHP*SGRGEA
Trigger: CGCCTCCCCACGGCCGCTCCAGGGGTGGCTGGAGAC...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDESRRSA*SPAAHP
Trigger: CGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGA...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENVGSRA*NQQVLE
Trigger: CTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAAC...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGTCAAAAAGCAGCAGTTaGCTCCAGGGCTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWSKSSS*LQGLEP
Trigger: TGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGA...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAATGCTGGACGTGATGTaGGAGAGGAAAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKMLDVM*ERKGDC
Trigger: GCAGTCACCTTTCCTCTCCCACATCACGTCCAGCAT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAAAGACTATTGTAGGCGTGGATaGTGGCAAGGCCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: EKLVMQPGGSSQRALDKDYCRRG*WQGPVC
Trigger: GCATACAGGGCCTTGCCACCATCCACGCCTACAATA...GTCTTTGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCAGTTCAACAACAGCCTaGCCAACAGTGAGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: DEPGAAEDPHNPSQGSSVSSTTA*PTVRVP
Trigger: AGGCACTCTCACTGTTGGCCAGGCTGTTGTTGAACT...GACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp AGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACACAGCACCAAGCAAGTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SNSVRWRCSEACSHTPRHTAPSK*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCACTTGCTTGGTGCTGT...GTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443376.5
3UTR CAA 72 bp AGAGACCACACGTCTTCCATTGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGAGAAGAAAGCCACGAA +
Preference number: 4 (lower is better)
Translates to: RDHTSSIESSPF*WATRAREESHE
Trigger: TTCGTGGCTTTCTTCTCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTCAATGGAAGACGTGTGGTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACATCTCTATCTTGATGTaGGGACTGGCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDISILM*GLAGLF
Trigger: GAACAAACCAGCCAGTCCTCACATCAAGATAGAGAT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGAAGCGAAGGTTCCACTaGTTGCAATGCTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQKRRFH*LQCCPL
Trigger: TAGAGGGCAGCATTGCAATCAGTGGAACCTTCGCTT...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATCCCGCTTCCTTGCTTaGTCCAGTAACTCAACCACC +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAISRFLA*SSNSTT
Trigger: GGTGGTTGAGTTACTGGATCAAGCAAGGAAGCGGGA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAATCCTCTCCACCGAGGTaGATCGAGCTTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQSSPPR*IELLSQ
Trigger: CTGAGACAGAAGCTCGATTCACCTCGGTGGAGAGGA...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACCAGCCATAGGAACCTaGGGCAGTGGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRPAIGT*GSGTLC
Trigger: ACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCCCTGAGCCCTGCCACTaGACTGTGGAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETPEPCH*TVEVWE
Trigger: TTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGG...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATACCTGAGCCCTGCCACTaGACTGTGGAGGTGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIIPEPCH*TVEVWE
Trigger: TTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGG...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAATCACCTTCTCTTTCTTaGCCCTGGAAGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKSPSLS*PWKPSC
Trigger: ACAAGAGGGCTTCCAGGGGCAAGAAAGAGAAGGTGA...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTCAGTGCGCTGCAGCTaGCTCACCTTCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSSVRCS*LTFSFL
Trigger: CAAGAAAGAGAAGGTGAGGCAGCTGCAGCGCACTGA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGACAAGGGGCCCCACTaGCACAAGGAACCACGGGAA +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETDKGPH*HKEPRE
Trigger: TTCCCGTGGTTCCTTGTGGCAGTGGGGCCCCTTGTC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGGGGAATCTGCCCGTaGATAAGAACGATCATCAGC +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAIGGICP*IRTIIS
Trigger: GCTGATGATCGTTCTTATGCACGGGCAGATTCCCCC...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGAGCCTAGAACCGTGTaGAGGCGATGGGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWREPRTV*RRWAMV
Trigger: GACCATTGCCCATCGCCTGCACACGGTTCTAGGCTC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGGCTGATCGGAGGGCCCACTATTaGCACACGTCTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: VVQDVDAPVTIQGPGKADRRAHY*HTSSFG
Trigger: TCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCG...ATCAGCCTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGAGCACAAAGGGGGTTTaGGGGAACACACCAAACCAC +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGESTKGV*GNTPNH
Trigger: GTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCT...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAGCCAGCCAGCTGCGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: EASQLRDHQAHDGQDEPGDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...ACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp GAAGCCAGCCAGCTGCGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: EASQLRDHQAHDGQDEPGQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...ACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACAGAAGGTCACCACGCTaGCAATCACCACCACAATGG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENRRSPR*QSPPQW
Trigger: CCATTGTGGTGGTGATTGCCAGCGTGGTGACCTTCT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACATGTGGTTGCCCACATaGGCATCTAAGGCACTGAGG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENMWLPT*ASKALR
Trigger: CCTCAGTGCCTTAGATGCCCATGTGGGCAACCACAT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCA +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRMNISA*NGSRTS
Trigger: TGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCAT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGCAGCTCCTGGTATCTaGAGACAATGTGCAGGACTG +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSAAPGI*RQCAGL
Trigger: CAGTCCTGCACATTGTCTCCAGATACCAGGAGCTGC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265586.10
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGGACAGAAGGACCGATaGGGTGTCAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPGQKDR*GVKLHH
Trigger: GTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTATCGGGAACTGTCGTTaGACAGAAGGACCGATGGGG +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPIGNCR*TEGPMG
Trigger: CCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGAT...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAATCGGGAACTGTCGTTaGACAGAAGGACCGATGGGG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQIGNCR*TEGPMG
Trigger: CCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGAT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGATGCTGGACGTGATGTaGGAGAGGAAAGGTGACTGC +
Preference number: 4 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKMLDVM*ERKGDC
Trigger: GCAGTCACCTTTCCTCTCCCACATCACGTCCAGCAT...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTCATCCAGCAGCTCCTaGTATCTGTGCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQSSSSS*YLCRNS
Trigger: GGAGTTTCTGCACAGATACCAGGAGCTGCTGGATGA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp AGTGCCACCTCAAAAAGCAGCAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SATSKSSSWLQG*EPTGLGAGELC
Trigger: ACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAGGTGGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: SNSVRWRCSEACSHTPRHTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...GTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: SNSVRWRCSEACSHTPRHSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...GTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLLRNDREFASEVGKANITRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...GATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp TTCTGCAGTTCACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCAACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: FCSSRQKTRAWTETTRLPTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...TGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp TCTTGCCACAGTCTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTGCTTGAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: SCHSLSSLLQFTSEDSCLSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...CAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGACTGTGGCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GTGCTTGCCTTCTTCCTCTTCGGGACTGGGCCGCTCGTCACTGTCCAGGAGGAGTTTTCATCTCTATCTTaGTGTGAGGACTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VLAFFLFGTGPLVTVQEEFSSLS*CEDWLV
Trigger: AACCAGCCAGTCCTCACATCAAGATAGAGATGAAAA...CTCCTCCTGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAGAAGGCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTTCCCGCTTCCTTGCTTaGTCCAGTAACTCAACCACC +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPSRFLA*SSNSTT
Trigger: GGTGGTTGAGTTACTGGATCAAGCAAGGAAGCGGGA...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACTTTCAGGATCAGCATaGCTGCCATGGAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRLSGSA*LPWRGR
Trigger: ACGCCCTCTCCATGGCAGTCATGCTGATCCTGAAAG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACTCGCAGCGTGCCCTTaGCAAAGACAACTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRLAACP*QRQLLE
Trigger: TTCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGACTCGCAGCGTGCCCTTaGCAAAGACAACTCCTCGAA +
Preference number: 4 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGLAACP*QRQLLE
Trigger: TTCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAG...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGGCTGATGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: VVQDVDAPVTIQGPGKADENLAP*NHQLEK
Trigger: CTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTC...ATCAGCCTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACCAGCCATAGGAACCTaGGGCAGTGGGACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSPAIGT*GSGTLC
Trigger: ACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGG...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACGGAAAGGTGACTGCGTaGTATTGTCCAGACGCTTCA +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENGKVTA*YCPDAS
Trigger: TGAAGCGTCTGGACAATATCACGCAGTCACCTTTCC...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGACGCTTCAGCCCTGTATGCTGGACGTaGTGTGGGAGAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: DVMWERKGDCVILSRRFSPVCWT*CGRGKV
Trigger: CACCTTTCCTCTCCCACATCACGTCCAGCATACAGG...GCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCTGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: AVSKGRLKGQQVVALGSFWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...GAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCPLGPRRSPPIRFLPSPALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...GGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AGCAACTCAGTAAGATGGCGGTGCAGTGAAGCCTGTTCCCACACACCTCGGCACGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: SNSVRWRCSEACSHTPRHALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...GTGCCGAGGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGTGGGAGGAGTCCCATaGCAAGGTGGCATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAIVGGVP*QGGIFH
Trigger: ATGAAAAATGCCACCTTGGCATGGGACTCCTCCCAC...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGCCGCCTGATGCTCAGTaGGCTGCAGCTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARPPDAQ*AAAASP
Trigger: AGGTGAGGCAGCTGCAGCGCACTGAGCATCAGGCGG...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKWPRWM*LPSSSS
Trigger: CGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCA...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAATCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQSRSML*SVLCKR
Trigger: GCGCTTACAGAGGACACTGCACAGCATCGATCTGGA...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTTCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPSRSML*SVLCKR
Trigger: GCGCTTACAGAGGACACTGCACAGCATCGATCTGGA...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGCTGATCCTCTGGCGCTaGCCACCGCTCAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARLILWR*PPLRLA
Trigger: AGCCAACCTGAGCGGTGGGCAGCGCCAGAGGATCAG...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCGTCCAGGATGTAGATaGTCCTGTCACTATACAAGG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSRPGCR*SCHYTR
Trigger: CCTTGTATAGTGACAGGAGCATCTACATCCTGGACG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGCGTCCAGGATGTAGATaGTCCTGTCACTATACAAGG +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQRPGCR*SCHYTR
Trigger: CCTTGTATAGTGACAGGAGCATCTACATCCTGGACG...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTCATTTTGGGGGTCAGCTTGGGCGAGTTCTGGATACTGGAGTGGGAGGAGTCCCCTTTCTCTTCCAGCTaGACAAGCTGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: FILGVSLGEFWILEWEESPFSSS*TSCPSS
Trigger: AGAGGAAGGGCAGCTTGTGCAGCTGGAAGAGAAAGG...GGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGGAGGATTGTCCTTCATaGTGTCACTCACCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGEEDCPS*CHSPRS
Trigger: AGACCTCGGTGAGTGACAGCATGAAGGACAATCCTC...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAGGGGGAATCTGCCCGTaGATAAGAACGATCATCAGC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQGGICP*IRTIIS
Trigger: GCTGATGATCGTTCTTATGCACGGGCAGATTCCCCC...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGGCAGGGAATGGCAATaGTCTAAAGAAAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDGREWQ*SKEKRL
Trigger: AAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGGAACTCACGGCGCTCTaGATGGTCTCCAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEELTAL*MVSSRP
Trigger: TGGGCGGCTGGAGACCATGCAGAGCGCCGTGAGTTC...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCACCCTGGAGACAATGTaGAGGACTGAAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATTLETM*RTEKRM
Trigger: CATCCTCTTTTCAGTCCTGCACATTGTCTCCAGGGT...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGAGAGGAAAGGTGACTaGGTGATATTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAIERKGD*VILSRR
Trigger: GCGTCTGGACAATATCACGCAGTCACCTTTCCTCTC...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCAGTGAGCCATGGTCATaGCACCGCACTACAGTCTGG +
Preference number: 4 (lower is better)
Translates to: WPQARSLRLVCVTLQNPISEPWS*HRTTVW
Trigger: CCAGACTGTAGTGCGGTGGCATGACCATGGCTCACT...GATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR CCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAACCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGAACGATCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: RDGETRIGWGNLPVHKNDQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...ATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTACTTCATTCATCTTCTaGACACGTTCATCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSTSFIF*TRSSVA
Trigger: CGCCACGGATGAACGTGTCCAGAAGATGAATGAAGT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAATTCTGGATACTGGAGTaGGAGGAGTCCCATGCCAAG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQFWILE*EESHAK
Trigger: CTTGGCATGGGACTCCTCCCACTCCAGTATCCAGAA...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGCAAGGCTGATCCTCTaGCGCTGCCCACCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLARLIL*RCPPLR
Trigger: CCTGAGCGGTGGGCAGCGCCAGAGGATCAGCCTTGC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGATCCCTCGAGTCACAGTaGTGTTCCCGCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRSLESQ*CSRFLA
Trigger: AGCAAGGAAGCGGGAACACCACTGTGACTCGAGGGA...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTAGGGCATCCCAAATCTaGTCTTCAGTGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSRASQI*SSVYWL
Trigger: CAACCAGTACACTGAAGACCAGATTTGGGATGCCCT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCACCGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCATCAGAATCTTACAGTaGCGGAGCAGGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QHRLLRNDREFASEVGKAIRILQ*RSRALA
Trigger: AGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGAT...GGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCGGTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR CCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGGGGCAATGGTCAGCATaGTACAGTCTGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQGQWSA*YSLQML
Trigger: AAGCATTTGCAGACTGTACCATGCTGACCATTGCCC...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAAGGAACCTGAGGCAGTaGGACTCTCTGTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQRNLRQ*DSLWID
Trigger: GTCTATCCACAGAGAGTCCCACTGCCTCAGGTTCCT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTCAAAAAGCAGCAGTTaGCTCCAGGGCTTGGAACCA +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENSKSSS*LQGLEP
Trigger: TGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGGAAGGCTGAACTCTTaGCGAGAGATTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: NGGQTPRSGGSYAEFQNPGRLNS*REILPS
Trigger: GCTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCC...TGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TTCACCAAGAGAGAGCACTGCAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCTGCATCAGTACAGACTaGGGAAAACCACGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FTKREHCRRRPSLADLQCCISTD*GKPRLP
Trigger: TGGCAGCCGTGGTTTTCCCCAGTCTGTACTGATGCA...GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCCTCCTCTTTCGTACTTaGCTGTGTGCCCCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSLLFRT*LCAPVF
Trigger: GAACACTGGGGCACACAGCCAAGTACGAAAGAGGAG...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCTGGGTAGCAGAGTTGTaGGTGCTGCTCCTCTTTCGT +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSWVAEL*VLLLFR
Trigger: ACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCA...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
3UTR CAA 72 bp TGGAACGGCAGCCGCACGTCAACTTCATCCATGTCTTaGGAAAACCTGTTGAGAATCCTCCCTGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: WNGSRTSTSSMS*ENLLRILPVGV
Trigger: GACCCCCACAGGGAGGATTCTCAACAGGTTTTCCAAAGACATGGATGAAGTTGACGTGCGGCTGCCGTTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGTCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ESKVVYQADSTQSVRAPETRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...CTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: GLEVATLNSKTQTLSGLISQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...AATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: STQVPYSKGDCSCKSELNSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAAGAGCCACACCCACAGTaGTGCTCTGGAAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQEEPHPQ*CSGSTQ
Trigger: CTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTC...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACCTAAAATGGCTGAAATaGGAGAGGTTTTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDLKWLK*ERFFHF
Trigger: GAAGTGGAAAAACCTCTCTCATTTCAGCCATTTTAG...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGATCCCGCTTCCTTGCTTaGTCCAGTAACTCAACCACC +
Preference number: 4 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGSRFLA*SSNSTT
Trigger: GGTGGTTGAGTTACTGGATCAAGCAAGGAAGCGGGA...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAACTGCCGTTCCCCCACTaGGAAGTTATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKLPFPH*EVIPIL
Trigger: GAGAATGGGGATAACTTCTCAGTGGGGGAACGGCAG...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAACAGCAACCAGCAACCTaGGGTAGGTCTCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQQQPAT*GRSLYS
Trigger: ACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTG...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGGCTGATGGAAAGGTGACTGCGTaGTATTGTCCAGACGCTTCA +
Preference number: 4 (lower is better)
Translates to: VVQDVDAPVTIQGPGKADGKVTA*YCPDAS
Trigger: TGAAGCGTCTGGACAATATCACGCAGTCACCTTTCC...ATCAGCCTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RCPLGPRRSPPIRFLPSPHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...GGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAACACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAIYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGEYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCAGTCTCCAAAGGAAGGCTGAAAGGACAGCAGGTGGTTGCCTTGGGCTCCTTCTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: AVSKGRLKGQQVVALGSFYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...GAAGGAGCCCAAGGCAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GACAGGATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: DRMSLVRQKIHTTLRREAVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...TGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGCAGGTTAGACTCTGTTaGCTGGGTATACTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGEQVRLC*LGILQE
Trigger: CTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTG...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGCAGGTTAGACTCTGTTaGCTGGGTATACTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKQVRLC*LGILQE
Trigger: CTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTG...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAAACAACAAGCTGTACTaGAGGTTAGACTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKNNKLY*RLDSVA
Trigger: GGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAACAACAAGCTGTACTaGAGGTTAGACTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATNNKLY*RLDSVA
Trigger: GGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTT...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACGGTTCGGTAATTCAATaGCCAAGTCAGTGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENGSVIQ*PSQCKR
Trigger: TCGCTTGCACTGACTTGGGCATTGAATTACCGAACC...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGGCCTCAAACATTCTCTaGCCATCGTTGGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGEASNIL*PSLEQM
Trigger: CATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGC...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCTCCAGCCAGCAGGCTaGCAACGGCTGCTGCCTCAA +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLLQPAG*QRLLPQ
Trigger: TTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGCCGCCTGATGCTCAGTaGGCTGCAGCTGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKPPDAQ*AAAASP
Trigger: AGGTGAGGCAGCTGCAGCGCACTGAGCATCAGGCGG...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGCTGATCCTCTGGCGCTaGCCACCGCTCAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKLILWR*PPLRLA
Trigger: AGCCAACCTGAGCGGTGGGCAGCGCCAGAGGATCAG...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCCACGGGAAGACTCCTaGGATCATTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKPREDS*DHSHTE
Trigger: TTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGGACAAGGGGCCCCACTaGCACAAGGAACCACGGGAA +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARDKGPH*HKEPRE
Trigger: TTCCCGTGGTTCCTTGTGGCAGTGGGGCCCCTTGTC...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGCTTAATTCTGGCAGGTaGTTCCAAGGACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQLNSGR*FQGQSL
Trigger: AAGACTCTGTCCTTGGAAGCACCTGCCAGAATTAAG...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAGCTATGCACAAGAGCTaGCGTTCCCCCACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSAMHKS*RSPTEK
Trigger: CTTCTCAGTGGGGGAACGGCAGCTCTTGTGCATAGC...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACAGCGACCTTGTTCTCTaGAGCAGCAAACATGGCATA +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENSDLVL*SSKHGI
Trigger: TATGCCATGTTTGCTGCTGCAGAGAACAAGGTCGCT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAGACTGTGCGACGACTaGGGTGAGAAAGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSRLCDD*GEKGKQ
Trigger: CTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCT...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRERERL*DDCGEK
Trigger: TTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAACAGGTGCCCAGGAAACAGAGTGAACGTCAAAGGCTCTCTTGTCTACTCTGCCCGGGCCACACAACGTaGTCTCACCCACTCATAGCA +
Preference number: 4 (lower is better)
Translates to: KQVPRKQSERQRLSCLLCPGHTT*SHPLIA
Trigger: TGCTATGAGTGGGTGAGAGCACGTTGTGTGGCCCGG...GCAGAGTAGACAAGAGAGCCTTTGACGTTCACTCTGTTTCCTGGGCACCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAAAGGACAGCAGGTGGTTaGCTTGGGCTCCTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKRTAGG*LGLLPS
Trigger: GGAAGGAAGGAGCCCAAGGCAACCACCTGCTGTCCT...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp CACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: HHGLEVATLNSKTQTLSGDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...CCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ATTGTCCTTCATGCTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTTTTCACCATGAAGGCTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IVLHAVTHRGLVPSSHSGFHHEG*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCAGCCTTCATGGTGAAA...ACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: APQHKGGLREHTKPHSNQLDSVA*VYSKRC
Trigger: ACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAGCGAGTTCTGGATACTaGAGTGGGAGGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSASSGY*SGRSPM
Trigger: CATGGGACTCCTCCCACTCCAGTATCCAGAACTCGC...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCACGCAGGTGGCCCAGGTaGATGTGCTTGCCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPRRWPR*MCLPSS
Trigger: GGAAGAAGGCAAGCACATCCACCTGGGCCACCTGCG...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCGCTGCTGGGAAGAATaGCCAGGTCAGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLRCWEE*PGQASG
Trigger: GCCTGAGGCCTGACCTGGCCATTCTTCCCAGCAGCG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCGCTGCTGGGAAGAATaGCCAGGTCAGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRRCWEE*PGQASG
Trigger: GCCTGAGGCCTGACCTGGCCATTCTTCCCAGCAGCG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATCCCTCGAGTCACAGTaGTGTTCCCGCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKSLESQ*CSRFLA
Trigger: AGCAAGGAAGCGGGAACACCACTGTGACTCGAGGGA...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCAGAGACCCGCATAGGCTaGGGGAATCTGCCCGTGCAT +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPETRIG*GNLPVH
Trigger: ATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTC...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp AATCGGGAACTGTCGTTGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCAGTCTGACCGTAAACTaGAACAGCCCCGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: NRELSLDRRTDGVSNSTTSLTVN*NSPVNW
Trigger: CCAGTTAACGGGGCTGTTCCAGTTTACGGTCAGACT...GGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTATCAGAATCTTACAGTaGCGGAGCAGGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPIRILQ*RSRALA
Trigger: AGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGAT...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAGGACAGAAGGACCGATaGGGTGTCAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSGQKDR*GVKLHH
Trigger: GTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCC...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCTGCAGCAGCAAACATaGCATAGAATCGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSLQQQT*HRIGNC
Trigger: ACAGTTCCCGATTCTATGCCATGTTTGCTGCTGCAG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATACTGCAGCAGCAAACATaGCATAGAATCGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAILQQQT*HRIGNC
Trigger: ACAGTTCCCGATTCTATGCCATGTTTGCTGCTGCAG...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKPHVFL*TPRKPG
Trigger: GCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGTCACGGCGCTCTGCATaGTCTCCAGCCGCCCACCCG +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKSRRSA*SPAAHP
Trigger: CGGGTGGGCGGCTGGAGACCATGCAGAGCGCCGTGA...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCCCACGCTCCCGAGCATaGGCCCTGCAGCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGPRSRA*ALQQNK
Trigger: CTTGTTTTGCTGCAGGGCTCATGCTCGGGAGCGTGG...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265586.10
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCATCCTTCATCTTCTCTaGGTGGAGGTTCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETILHLL*VEVPGL
Trigger: GAGCCCTGGAACCTCCACTCAGAGAAGATGAAGGAT...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACCTCGGCACTGATGGAGCAGTCTCCAAAGGAAGGCTGAACTCTTGGCGAGAGACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: HLGTDGAVSKGRLNSWRETQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...CTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTCGGGCTGCTGTTTCCAAGGCATCTTGGCATTCCAACTGTAATCCCAGCACTAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ARAAVSKASWHSNCNPSTRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...AGTGCTGGGATTACAGTTGGAATGCCAAGATGCCTTGGAAACAGCAGCCCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAGCCAGCCAGCTGCGTaGTCATCAGGCACACGATGG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGSQPAA*SSGTRW
Trigger: CCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCT...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTATATGCTGTGAGCCGTaGTGCAAACATCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPICCEP*CKHHCW
Trigger: CCAGCAATGATGTTTGCATCACGGCTCACAGCATAT...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCAGACTGTCACCACTGTaGAAGCCTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETRLSPL*KPVLLS
Trigger: TGACAGCAGCACAGGCTTTCACAGTGGTGACAGTCT...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTTTTTCATCTCTATCTTaGTGTGAGGACTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSFSSLS*CEDWLV
Trigger: AACCAGCCAGTCCTCACATCAAGATAGAGATGAAAA...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAATTTTCATCTCTATCTTaGTGTGAGGACTGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKFSSLS*CEDWLV
Trigger: AACCAGCCAGTCCTCACATCAAGATAGAGATGAAAA...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTACAGCCCTCTTTCATaGAGATCACTTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALYSPLS*RSLHHS
Trigger: ACTGTGATGAAGTGATCTTCATGAAAGAGGGCTGTA...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTTTTTCCTTCTTTACTaGTCCTGTTTTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: GAGELCAVASHRNLRQWDFFLLY*SCFRTL
Trigger: AAGGGTCCTAAAACAGGATCAGTAAAGAAGGAAAAA...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAGAAGGGGTCCAAATTTaGTCTGACAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQEGVQI*SDSATE
Trigger: TTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTC...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCCAGCTAGAGAAGAATaGAATGCTACTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSPAREE*NATLPT
Trigger: TGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCAGCAACCAGCAACCTaGGGTAGGTCTCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKQQPAT*GRSLYS
Trigger: ACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGTGGGAGAGGAAAGGTaGCTGCGTGATATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETVGEER*LRDIVQ
Trigger: CTGGACAATATCACGCAGTCACCTTTCCTCTCCCAC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCTCGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: WPQARSLRLVCVTLQNPISVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGA...GATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR TCA 90 bp CAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCACTATAAACACTTTGGGAGGCTaGGGTGGGAGGATGGCCTCA +
Preference number: 4 (lower is better)
Translates to: QARSLRLVCVTLQNPITINTLGG*GGRMAS
Trigger: TGAGGCCATCCTCCCACCTCAGCCTCCCAAAGTGTT...TATAGTGATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR GCA 90 bp TGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCCCCGAGCATGAGCCCTaGAGCAAAACAAGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: WPQARSLRLVCVTLQNPIPEHEP*SKTSLY
Trigger: ATAAAGGCTTGTTTTGCTGCAGGGCTCATGCTCGGG...GATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAAGCCATGATGGTACTTTCCCTTGGGATGCTCCTCATCCAGGATTCTGAGCTGACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: QAMMVLSLGMLLIQDSELTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...CAGCTCAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATCATGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAACAGGTTAGACTCTGTTaGCTGGGTATACTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQQVRLC*LGILQE
Trigger: CTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTG...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACAACAACAAGCTGTACTaGAGGTTAGACTCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENNNKLY*RLDSVA
Trigger: GGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGGTTCGGTAATTCAATaGCCAAGTCAGTGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPGSVIQ*PSQCKR
Trigger: TCGCTTGCACTGACTTGGGCATTGAATTACCGAACC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACACTGTGAAAGCCTGTaGTGCTGTCAGATCGAAGCC +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSHCESL*CCQIEA
Trigger: GGCTTCGATCTGACAGCAGCACAGGCTTTCACAGTG...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATCCAGATCGATGCTGTaGAGTGTCCTCTGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKSRSML*SVLCKR
Trigger: GCGCTTACAGAGGACACTGCACAGCATCGATCTGGA...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCTCTCCGTCAGGTCGCTaGTGGGAAGAATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSSPSGR*WEEWPG
Trigger: ACCTGGCCATTCTTCCCAGCAGCGACCTGACGGAGA...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCCGTCCAGGATGTAGATaGTCCTGTCACTATACAAGG +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSRPGCR*SCHYTR
Trigger: CCTTGTATAGTGACAGGAGCATCTACATCCTGGACG...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTGACAAGGGGCCCCACTaGCACAAGGAACCACGGGAA +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVDKGPH*HKEPRE
Trigger: TTCCCGTGGTTCCTTGTGGCAGTGGGGCCCCTTGTC...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCTTAATTCTGGCAGGTaGTTCCAAGGACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSLNSGR*FQGQSL
Trigger: AAGACTCTGTCCTTGGAAGCACCTGCCAGAATTAAG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTAAGCCAATCCGGAACTaGTGTGCGAAAGATAAAATC +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSKPIRN*CAKDKI
Trigger: GATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAAGAGAGAGAGAGACTGTaGGACGACTGCGGTGAGAAA +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKERERL*DDCGEK
Trigger: TTTCTCACCGCAGTCGTCGCACAGTCTCTCTCTCTC...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAAGCTCCTGGTATCTGTaGAGAAACTCCTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQSSWYL*RNSCPL
Trigger: TAAAGGGCAGGAGTTTCTGCACAGATACCAGGAGCT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTGGTATGTTCCCGGTaGTGGCTCACCAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: FRFQELLYSTSPLPQIFRLVCSR*WLTSPG
Trigger: GCCCGGGCTGGTGAGCCAGCACCGGGAACATACCAA...CCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTAGACCCCCGGGCACCCTaGACATATAGCGGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLDPRAP*TYSGSP
Trigger: GGGACTGCCGCTATATGTGCAGGGTGCCCGGGGGTC...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAACAGAGTTGTGGGTGCTaGTCCTCTTTCGTACTTGGC +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKQSCGC*SSFVLG
Trigger: GCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTG...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ATTGTCCTTCATGCTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: IVLHAVTHRGLVPSSHSGDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...ACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCATTTCACCATGAAGGCTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSFHHEG*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCAGCCTTCATGGTGAAA...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAACTTCATTCATCTTCTaGACACGTTCATCCGTGGCG +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQTSFIF*TRSSVA
Trigger: CGCCACGGATGAACGTGTCCAGAAGATGAATGAAGT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCTTCCTCTTCGGGACTaGGCCGCTCGTCACTGTCCA +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRLPLRD*AARHCP
Trigger: TGGACAGTGACGAGCGGCCCAGTCCCGAAGAGGAAG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCACGCTGCTGGGAAGAATaGCCAGGTCAGGCCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIARCWEE*PGQASG
Trigger: GCCTGAGGCCTGACCTGGCCATTCTTCCCAGCAGCG...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGGCAAGGCTGATCCTCTaGCGCTGCCCACCGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKARLIL*RCPPLR
Trigger: CCTGAGCGGTGGGCAGCGCCAGAGGATCAGCCTTGC...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATCGGGAACTGTCGTTGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCGCACTATTGAAGATGTaGTTGCCCACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: NRELSLDRRTDGVSNSTTALLKM*LPTWAS
Trigger: AGATGCCCATGTGGGCAACCACATCTTCAATAGTGC...GGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGACCAGGTACTGTAACTaGTGGGTAACAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALTRYCN*WVTNRT
Trigger: AGTTCTGTTTGTTACCCACCAGTTACAGTACCTGGT...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCAGGTACTGTAACTaGTGGGTAACAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKTRYCN*WVTNRT
Trigger: AGTTCTGTTTGTTACCCACCAGTTACAGTACCTGGT...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTCATTTTGGGGGTCAGCTTGGGCGAGTTCTGGATACTGGAGTGGGAGGAGTCCAGAGGGCGTAGATGCTaGCATAGTACTGCATATGAG +
Preference number: 4 (lower is better)
Translates to: FILGVSLGEFWILEWEESRGRRC*HSTAYE
Trigger: CTCATATGCAGTACTATGCCAGCATCTACGCCCTCT...GGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp ATTGTCCTTCATGCTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTACCAGGATAACGTTCTaGATGAACATCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IVLHAVTHRGLVPSSHSGTRITF*MNISAW
Trigger: CCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGT...ACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GTCCTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAGGGCATCCCAAATCTaGTCTTCAGTGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: VLSRASQIWSSVYWLKGSRASQI*SSVYWL
Trigger: CAACCAGTACACTGAAGACCAGATTTGGGATGCCCT...GGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGATCAGAATCTTACAGTaGCGGAGCAGGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKIRILQ*RSRALA
Trigger: AGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGAT...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCCCCAGGCAGGGAATaGCAATGCTCTAAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRAPGRE*QCSKEK
Trigger: CTTTTCTTTAGAGCATTGCCATTCCCTGCCTGGGGC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCATGTAGGCGTGGATGGTaGCAAGGCCCTGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPCRRGW*QGPVCW
Trigger: CCAGCATACAGGGCCTTGCCACCATCCACGCCTACA...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: HHGLEVATLNSKTQTLSGSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...CCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ACAACGTGCTCTCACCCACTCATAGCACTGCAAGACACATCTGCCTGCACCGACGCCATTTTTCAGCACTaGGTAATAGCATCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: TTCSHPLIALQDTSACTDAIFQH*VIASAP
Trigger: AGGCGCTGATGCTATTACCCAGTGCTGAAAAATGGC...GTCGGTGCAGGCAGATGTGTCTTGCAGTGCTATGAGTGGGTGAGAGCACGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AAACAGGTGCCCAGGAAACAGAGTGAACGTCAAAGGCTCTCTTGTCTACTCTGCAGCAGGTGGTTGCCTTaGGCTCCTTCCTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: KQVPRKQSERQRLSCLLCSRWLP*APSFPY
Trigger: GTATGGGAAGGAAGGAGCCCAAGGCAACCACCTGCT...GCAGAGTAGACAAGAGAGCCTTTGACGTTCACTCTGTTTCCTGGGCACCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp ACTGAAGCCAGCCAGCTGCGTGATCATCAGGCACACGATGGACAGGATGAGCCTGTTTCCAAGGCATCTTaGCATTCCAACTGTAATCCC +
Preference number: 4 (lower is better)
Translates to: TEASQLRDHQAHDGQDEPVSKAS*HSNCNP
Trigger: GGGATTACAGTTGGAATGCCAAGATGCCTTGGAAAC...AGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGCAAAGATGAGACACTaGATCAAGACCAGGGAGACA +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPAKMRH*IKTRET
Trigger: TGTCTCCCTGGTCTTGATCCAGTGTCTCATCTTTGC...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: CSCKSELNDRQKWRPDTTPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...CGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGAGGATAAAAACAGCTaGTCCCAGGAAGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETEDKNS*SQEACW
Trigger: CCAACAGGCTTCCTGGGATCAGCTGTTTTTATCCTC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGAGCCACACCCACAGTaGTGCTCTGGAAGTACCCAG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGEPHPQ*CSGSTQ
Trigger: CTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAAAGACTGTCACCACTGTaGAAGCCTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQERLSPL*KPVLLS
Trigger: TGACAGCAGCACAGGCTTTCACAGTGGTGACAGTCT...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAATCTCTATCTTGATGTaGGGACTGGCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: THEILSPATELWRCGNRQISILM*GLAGLF
Trigger: GAACAAACCAGCCAGTCCTCACATCAAGATAGAGAT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAACTAAAATGGCTGAAATaGGAGAGGTTTTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKLKWLK*ERFFHF
Trigger: GAAGTGGAAAAACCTCTCTCATTTCAGCCATTTTAG...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAAAGCGAAGGTTCCACTaGTTGCAATGCTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIIKRRFH*LQCCPL
Trigger: TAGAGGGCAGCATTGCAATCAGTGGAACCTTCGCTT...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACAGGCCCGGGCAAGGCTaGTCCTCTGGCGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNRPGQG*SSGAAH
Trigger: GTGGGCAGCGCCAGAGGATCAGCCTTGCCCGGGCCT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAGCACCGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCTACAGCCCTCTTTCATaGAGATCACTTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: QHRLLRNDREFASEVGKAYSPLS*RSLHHS
Trigger: ACTGTGATGAAGTGATCTTCATGAAAGAGGGCTGTA...GGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCGGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCAACCACCAGGTGCTaGAGGCGGTGCTGCCTACAT +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVSTTRC*RRCCLH
Trigger: ATGTAGGCAGCACCGCCTTCAGCACCTGGTGGTTGA...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTCTTTCAGGATCAGCATaGCTGCCATGGAGAGGGCGT +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFLSGSA*LPWRGR
Trigger: ACGCCCTCTCCATGGCAGTCATGCTGATCCTGAAAG...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: AAVGSRAWNQQVLELESSSFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGCCAGCTAGAGAAGAATaGAATGCTACTCTTCCTACA +
Preference number: 4 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKPAREE*NATLPT
Trigger: TGTAGGAAGAGTAGCATTTCATTCTTCTCTAGCTGG...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCAGACCCACGAAATCCTaGGCCCTGCCACTGAACTGT +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSRPTKS*ALPLNC
Trigger: ACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGTCT...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGAACAGCACTCAATCAGTaGGGGCTCCTGAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: STQSVRAPEVAMILQRSRTALNQ*GLLRLQ
Trigger: TTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGT...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTAGATTCTGCCCAGCTTaGCTCTCTCATTCTGACCGC +
Preference number: 4 (lower is better)
Translates to: WVTTVYSRVAGLLARRLARFCPA*LSHSDR
Trigger: GCGGTCAGAATGAGAGAGTCAAGCTGGGCAGAATCT...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CAAGCCATGATGGTACTTTCCCTTGGGATGCTCCTCATCCAGGATTCTGAGCTGTCGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: QAMMVLSLGMLLIQDSELSVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGA...CAGCTCAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATCATGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp CAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCACTATAGACAGAGTGAGACTCTaGCTCGGTCGAGTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QARSLRLVCVTLQNPITIDRVRL*LGRVLL
Trigger: CAGGAGAACTCGACCGAGTCAGAGTCTCACTCTGTC...TATAGTGATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR GCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDECASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTTCCAGTATGCAATCCAAAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: FPVCNPKCGTESQGQSPLCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...AAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGATTGCATACTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCATCACTATATGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: QARSLRLVCVTLQNPITICASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...TATAGTGATGGGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR GCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIAALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CTCCTCATCCAGGATTCTGAGCTGAGAATGCATGGAGGCATCAAGAGAGAGGCCTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: LLIQDSELRMHGGIKREAYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...GGCCTCTCTCTTGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACAAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: TKMEARHHGLEVATLNSKTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...TTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: KNGGQTPRSGGSYAEFQNTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...GTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTCTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCCTCAAACATTCTCTaGCCATCGTTGGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRASNIL*PSLEQM
Trigger: CATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGAGCCTCAAACATTCTCTaGCCATCGTTGGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGASNIL*PSLEQM
Trigger: CATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGC...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGCAGGCTGCCAACGGCTaGTGCCTCAAACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEQAANG*CLKHSL
Trigger: CAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTG...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTCAGGCTGCCAACGGCTaGTGCCTCAAACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFQAANG*CLKHSL
Trigger: CAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTG...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATATCACCTTCTCTTTCTTaGCCCTGGAAGCCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIISPSLS*PWKPSC
Trigger: ACAAGAGGGCTTCCAGGGGCAAGAAAGAGAAGGTGA...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATCGGTACCTCATCTCTaGGTTCTCAAAGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKSVPHL*VLKGHL
Trigger: GAGGTGACCTTTGAGAACGCAGAGATGAGGTACCGA...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCGAGCCTAGAACCGTGTaGAGGCGATGGGCAATGGTC +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLREPRTV*RRWAMV
Trigger: GACCATTGCCCATCGCCTGCACACGGTTCTAGGCTC...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTAAGCCAATCCGGAACTaGTGTGCGAAAGATAAAATC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSKPIRN*CAKDKI
Trigger: GATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTT...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCTCAGTAAGATGGCGGTaGAGTGAAGCCTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVSVRWR*SEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGA...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCGGACACGTTCATCCGTaGCGGCCACGCATTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRGHVHP*RPRIFS
Trigger: GGAGAAAATGCGTGGCCGCCACGGATGAACGTGTCC...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTGCGAGTTCTGGATACTaGAGTGGGAGGAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFASSGY*SGRSPM
Trigger: CATGGGACTCCTCCCACTCCAGTATCCAGAACTCGC...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGAGCTTGGGCGAGTTCTaGATACTGGAGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDESLGEF*ILEWEE
Trigger: CTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCT...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCTCTGTAAGCGCAGGTaGCCCAGGTGGATGTGCTTG +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLLCKRR*PRWMCL
Trigger: CAAGCACATCCACCTGGGCCACCTGCGCTTACAGAG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATCTAGAAGCGTCATCTaGCCTAAAATGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: AWNQQVLELESSVQWPAISRSVI*PKMAEM
Trigger: CATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGCACTATTGAAGATGTaGTTGCCCACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKALLKM*LPTWAS
Trigger: AGATGCCCATGTGGGCAACCACATCTTCAATAGTGC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTAGGTACTGTAACTGGTaGGTAACAAACAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSRYCNW*VTNRTV
Trigger: GACAGTTCTGTTTGTTACCCACCAGTTACAGTACCT...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAAGAGGGCGTAGATGCTaGCATAGTACTGCATATGAG +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRRGRRC*HSTAYE
Trigger: CTCATATGCAGTACTATGCCAGCATCTACGCCCTCT...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGTCTGACCGTAAACTaGAACAGCCCCGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSLTVN*NSPVNW
Trigger: CCAGTTAACGGGGCTGTTCCAGTTTACGGTCAGACT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGGGCAATGGTCAGCATaGTACAGTCTGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRGQWSA*YSLQML
Trigger: AAGCATTTGCAGACTGTACCATGCTGACCATTGCCC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGGCAGGCGATGGGCAATaGTCAGCATGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARAGDGQ*SAWYSL
Trigger: CAGACTGTACCATGCTGACCATTGCCCATCGCCTGC...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSTVCRR*AMVSMV
Trigger: TACCATGCTGACCATTGCCCATCGCCTGCACACGGT...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTGTAGGCGTGGATGGTaGCAAGGCCCTGTATGCTGG +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVCRRGW*QGPVCW
Trigger: CCAGCATACAGGGCCTTGCCACCATCCACGCCTACA...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACCTCGGCACTGATGGAGCAGTCTCCAAAGGAAGGCTGAACTCTTGGCGAGAGTCAAGGAAAAACTGGTaGCATCCTTCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HLGTDGAVSKGRLNSWRESRKNW*HPSGSF
Trigger: AAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGA...CTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGGATGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCAAAGTTAGCCAGGCATaGTGGCACGAGATTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RMASGQEFETSLCNPPKPKVSQA*WHEIVV
Trigger: GACTACAATCTCGTGCCACCATGCCTGGCTAACTTT...GGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR CAA 72 bp AGGCAAATGAAAAAGTGCCACCTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RQMKKCHLKKQQ*APGLGTNRSWS
Trigger: GCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAGGTGGCACTTTTTCATTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp TCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCTTCCATTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLLQFTSEDSC*DRDHTSSIESS
Trigger: GGAGCTCTCAATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
3UTR CAA 72 bp TTGAGATGTTTCCGGATAGCACTATTGAAGATGTGGTaGCCCACATGGGCATCTAAGGCACTGAGGGGGTCG +
Preference number: 4 (lower is better)
Translates to: LRCFRIALLKMW*PTWASKALRGS
Trigger: CGACCCCCTCAGTGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 72 bp AGAAAAGAGACTTCGTCAACAGGGAGGAGTCAGCCCTaGACAGCGACCTTGTTCTCTGCAGCAGCAAACATG +
Preference number: 4 (lower is better)
Translates to: RKETSSTGRSQP*TATLFSAAANM
Trigger: CATGTTTGCTGCTGCAGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCCCTGTTGACGAAGTCTCTTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp ACAAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: TKMEARHHGLEVATLNSKRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...TTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGAAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: STQSVRAPEVAMILQRSRRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGACGCTTCAGCATCTCTATCTTGATGTaGGGACTGGCTGGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: DVMWERKGDCVILSRRFSISILM*GLAGLF
Trigger: GAACAAACCAGCCAGTCCTCACATCAAGATAGAGAT...GCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGCCCTCTAGAAGCGTCATCTGGCCTAAAATGGCTGAAATGAGAGAGGTTTTTTCCTCTCCACCGAGGTaGATCGAGCTTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LPSRSVIWPKMAEMREVFSSPPR*IELLSQ
Trigger: CTGAGACAGAAGCTCGATTCACCTCGGTGGAGAGGA...AAAAACCTCTCTCATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGAGGGCAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGTCACTCCATCAATCTTaGTGCAGCCTCCAGATAACT +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKSLHQS*CSLQIT
Trigger: AGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGA...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAAAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGAAGGGGTCCAAATTTaGTCTGACAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETEGVQI*SDSATE
Trigger: TTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCTGCCGTTCCCCCACTaGGAAGTTATCCCCATTCTC +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLLPFPH*EVIPIL
Trigger: GAGAATGGGGATAACTTCTCAGTGGGGGAACGGCAG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGGAAAACCTGGCACCGTaGAACCACCAGCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEENLAP*NHQLEK
Trigger: CTTCTCTAGCTGGTGGTTTCACGGTGCCAGGTTTTC...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FRFQELLYSTSPLPQIFRHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...CCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGCCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GAGTCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGTGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: ESKVVYQADSTQSVRAPEWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...CTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTATCAGTGAGGGCTCCTaGGGTTGCAATGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: WVTTVYSRVAGLLARRLAISEGS*GCNDSA
Trigger: TGCAGAATCATTGCAACCTCAGGAGCCCTCACTGAT...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACGGACTCCAGGTCAGACTCTAAAATCCTCGACAGTCCTCTAGTTTTCTCAGGGATCAGTGAGGGCTCCTaGGGTTGCAATGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: TDSRSDSKILDSPLVFSGISEGS*GCNDSA
Trigger: TGCAGAATCATTGCAACCTCAGGAGCCCTCACTGAT...CCCTGAGAAAACTAGAGGACTGTCGAGGATTTTAGAGTCTGACCTGGAGTCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGAATCAGTGAGGGCTCCTaGGGTTGCAATGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: STQSVRAPEVAMILQRSRISEGS*GCNDSA
Trigger: TGCAGAATCATTGCAACCTCAGGAGCCCTCACTGAT...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGTACCTAGCCCAAAGCTaGGCACAACCTCTGCAACAG +
Preference number: 4 (lower is better)
Translates to: IGDFRFQELLYSTSPLPQYLAQS*AQPLQQ
Trigger: CTGTTGCAGAGGTTGTGCTCAGCTTTGGGCTAGGTA...CTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: KYHLQRASHKHCTAGEALALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TCTTGCCACAGTCTCTCTAGTCTTCTGCAGTTCACGTCAGAAGACTCGTGCTTGGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: SCHSLSSLLQFTSEDSCLALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...CAAGCACGAGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGACTGTGGCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: STQVPYSKGDCSCKSELNTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTCTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGGCTGCCAACGGCTaGTGCCTCAAACATTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRQAANG*CLKHSL
Trigger: CAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCCAGGTGGATGTGCTTaGCTTCTTCCTCTTCGGGAC +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRPGGCA*LLPLRD
Trigger: GTCCCGAAGAGGAAGAAGGCAAGCACATCCACCTGG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCTGGCCCAGGTGGATGTaGTTGCCTTCTTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRWPRWM*LPSSSS
Trigger: CGAAGAGGAAGAAGGCAAGCACATCCACCTGGGCCA...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTCATAATAACCAGGAATaGCAAGGGGCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVHNNQE*QGAPSS
Trigger: GCTGCTGGGGGCCCCTTGGCATTCCTGGTTATTATG...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCTGGATACTGGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTAGAGGATTGTCCTTCATaGTGTCACTCACCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SGYWSGRSPMPRWHFSSLEDCPS*CHSPRS
Trigger: AGACCTCGGTGAGTGACAGCATGAAGGACAATCCTC...TAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGCCACGGGAAGACTCCTaGGATCATTCCCACACAGAA +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARPREDS*DHSHTE
Trigger: TTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGG...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGCTTCTGTCTCAGATaGCAGTCTGACCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSFCLR*QSDRKL
Trigger: CAGTTTACGGTCAGACTGGCATCTGAGACAGAAGCT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGGTACAGTCTGCAAATaGTTCTCGGATGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETGTVCK*FSDGLL
Trigger: CAAGAGACCATCCGAGAAGCATTTGCAGACTGTACC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCCGGAGGGCCCACTATTaGCACACGTCTTCCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGRRAHY*HTSSFG
Trigger: TCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCG...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCTGGATACTGGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTAGAGAGGAAAGGTGACTaGGTGATATTGTCCAGACGC +
Preference number: 4 (lower is better)
Translates to: SGYWSGRSPMPRWHFSSLERKGD*VILSRR
Trigger: GCGTCTGGACAATATCACGCAGTCACCTTTCCTCTC...TAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCCATCCTTCCAGCTGTTaGCAAAATCCATCGACCCCT +
Preference number: 4 (lower is better)
Translates to: RCPLGPRRSPPIRFLPSPHPSSC*QNPSTP
Trigger: AGGGGTCGATGGATTTTGGCAACAGCTGGAAGGATG...GGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGCGTCCCAGAAGTGCTaGTTCTCTCCCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGASQKC*FSPSHF
Trigger: GAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATACCAGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAGCGTCCCAGAAGTGCTaGTTCTCTCCCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: NTRCPLGPRRSPPIRFLPASQKC*FSPSHF
Trigger: GAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGC...TGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAGCGTCCCAGAAGTGCTaGTTCTCTCCCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLASQKC*FSPSHF
Trigger: GAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGC...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LGHHCIQPGCWFTSKKIGDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...GCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: TLLKMAGATGALSCEELPQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATACCAGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCACAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NTRCPLGPRRSPPIRFLPQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...TGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGTTTCACCATGAAGGCTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEFHHEG*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCAGCCTTCATGGTGAAA...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGATTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRLDSVA*VYSKRC
Trigger: ACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAA...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAGCTTGGGCGAGTTCTaGATACTGGAGTGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGSLGEF*ILEWEE
Trigger: CTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCT...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGTTTTGGGGGTCAGCTTaGGCGAGTTCTGGATACTGG +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEFWGSA*ASSGYW
Trigger: CCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAA...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGGACAGCATAAGAGATaGCGAGACCCGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGGQHKR*RDPHRL
Trigger: CAGCCTATGCGGGTCTCGCCATCTCTTATGCTGTCC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGGACAGAAGGACCGATaGGGTGTCAAACTCCACCAC +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERGQKDR*GVKLHH
Trigger: GTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCC...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAACTGCAGCAGCAAACATaGCATAGAATCGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKLQQQT*HRIGNC
Trigger: ACAGTTCCCGATTCTATGCCATGTTTGCTGCTGCAG...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGACACCCAGAAAACCTaGCACCGTGAAACCACCAGC +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLDTQKT*HRETTS
Trigger: GCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTGACACCCAGAAAACCTaGCACCGTGAAACCACCAGC +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVDTQKT*HRETTS
Trigger: GCTGGTGGTTTCACGGTGCCAGGTTTTCTGGGTGTC...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCACTGATTCTCACTCCAAGGAACCTGAGGCAGTaGGACTCTCTGTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: IESLLRRSARPISLILTPRNLRQ*DSLWID
Trigger: GTCTATCCACAGAGAGTCCCACTGCCTCAGGTTCCT...TGGAGTGAGAATCAGTGATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERVGSRA*NQQVLE
Trigger: CTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAAC...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGCCTGCCACTGAACTGTaGAGGTGTGGGAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEPATEL*RCGNRQ
Trigger: TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGG...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGCTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KMAGATGALSCEELPLLGLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KNGGQTPRSGGSYAEFQNLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...GTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACGTACTCTGCTCAAAATaGCTGGTGCTACTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KNGGQTPRSGGSYAEFQNVLCSK*LVLLVH
Trigger: GTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTAC...GTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACGTACTCTGCTCAAAATaGCTGGTGCTACTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHVLCSK*LVLLVH
Trigger: GTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTAC...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGCCGTGGCCGGGCCCCTaGAGACTGTCGGAAAGGATG +
Preference number: 4 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMPWPGP*RLSERM
Trigger: CATCCTTTCCGACAGTCTCCAGGGGCCCGGCCACGG...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CAA 72 bp CCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCATaGCTTGGGTCACCACTGTATACAGCCGGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PLPSLRFLGLYP*LGSPLYTAGLL
Trigger: CAGCAACCCGGCTGTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
3UTR CAA 72 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGATCTGACAGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYW*KGSKFDLTVPL
Trigger: CAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp CTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTAATACTACATACTCTCCACGCTCCCGAGCATaGGCCCTGCAGCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LPAGIQESKLVICNTTYSPRSRA*ALQQNK
Trigger: CTTGTTTTGCTGCAGGGCTCATGCTCGGGAGCGTGG...AGAGTATGTAGTATTACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR TCA 90 bp CTGCAGTTCACGTCAGAAGACTCGTGCTTGGACAGAGACCACACGTCTTCCATTACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: LQFTSEDSCLDRDHTSSITQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...AATGGAAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGTGAACTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR TCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAAATATGCTGTGAGCCGTaGTGCAAACATCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQEICCEP*CKHHCW
Trigger: CCAGCAATGATGTTTGCATCACGGCTCACAGCATAT...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTAGACTGTCACCACTGTaGAAGCCTGTGCTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVRLSPL*KPVLLS
Trigger: TGACAGCAGCACAGGCTTTCACAGTGGTGACAGTCT...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGATACAGCCCTCTTTCATaGAGATCACTTCATCACAGT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRYSPLS*RSLHHS
Trigger: ACTGTGATGAAGTGATCTTCATGAAAGAGGGCTGTA...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCGACAATGTGCAGGACTaGAAAGAGGATGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSDNVQD*KEDDKG
Trigger: CCCCTTGTCATCCTCTTTTCAGTCCTGCACATTGTC...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGCAAGGCCAATATCACTaGTTCTCACTCCATCAATCT +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKQGQYH*FSLHQS
Trigger: AGATTGATGGAGTGAGAATCAGTGATATTGGCCTTG...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTCTCTGTGGATAGACTaGTTCTTGTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENSLWID*FLFRNN
Trigger: GTTGTTTCTAAACAAGAATCAGTCTATCCACAGAGA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCA +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCVRRLR*ERKTDP
Trigger: TGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCAC...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGTGGGAGAGGAAAGGTaGCTGCGTGATATTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLVGEER*LRDIVQ
Trigger: CTGGACAATATCACGCAGTCACCTTTCCTCTCCCAC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAACTCCTGAGGTTGCAATaGTTCTGCAACGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKLLRLQ*FCNGVD
Trigger: ATCTACTCCGTTGCAGAATCATTGCAACCTCAGGAG...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCACAGCACTCAATCAGTaGGGGCTCCTGAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSTALNQ*GLLRLQ
Trigger: TTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGT...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGTTAGAGGGGAGCCAATaGAGTTCTTGCATTGGCCAA +
Preference number: 4 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLLEGSQ*SSCIGQ
Trigger: TTGGCCAATGCAAGAACTTCATTGGCTCCCCTCTAA...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGGTGAAGCCACCAAGCTaGATACGGATAGGTACCATT +
Preference number: 4 (lower is better)
Translates to: KMAGATGALSCEELPLLGVKPPS*IRIGTI
Trigger: AATGGTACCTATCCGTATTCAGCTTGGTGGCTTCAC...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGTCAGGGGAGGGACTGTaGAGCCACCAAGCTGAATAC +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMSGEGL*SHQAEY
Trigger: GTATTCAGCTTGGTGGCTTCACAGTCCCTCCCCTGA...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCACCATTAACATTACTATaGCCCCCGGGCACCCTGCAC +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPPLTLL*PPGTLH
Trigger: GTGCAGGGTGCCCGGGGGTCATAGTAATGTTAATGG...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTG +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHALGSG*CFQGIL
Trigger: CAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGC...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp GCTCGGGCTGCTGTTTCCAAGGCATCTTGGCATTCCAACTGTAATCCCAGCACTTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: ARAAVSKASWHSNCNPSTSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...AGTGCTGGGATTACAGTTGGAATGCCAAGATGCCTTGGAAACAGCAGCCCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGTGTGAAAGCCTGTGCTaGTGTCAGATCGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLCESLC*CQIEAQ
Trigger: CTGGGCTTCGATCTGACAGCAGCACAGGCTTTCACA...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGATCAGTGCGCTGCAGCTaGCTCACCTTCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERSVRCS*LTFSFL
Trigger: CAAGAAAGAGAAGGTGAGGCAGCTGCAGCGCACTGA...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCTCCGTCAGGTCGCTaGTGGGAAGAATGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESPSGR*WEEWPG
Trigger: ACCTGGCCATTCTTCCCAGCAGCGACCTGACGGAGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGGCAGGGAATGGCAATaGTCTAAAGAAAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRGREWQ*SKEKRL
Trigger: AAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCTGGATACTGGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTAAGCTCCTGGTATCTGTaGAGAAACTCCTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SGYWSGRSPMPRWHFSSLSSWYL*RNSCPL
Trigger: TAAAGGGCAGGAGTTTCTGCACAGATACCAGGAGCT...TAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp ACGGACTCCAGGTCAGACTCTAAAATCCTCGACAGTCCTCTAGTTTTCTCAGGGACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: TDSRSDSKILDSPLVFSGTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...CCCTGAGAAAACTAGAGGACTGTCGAGGATTTTAGAGTCTGACCTGGAGTCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: WVTTVYSRVAGLLARRLAAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GTTCATGTTAACACACAACCGAGAAGCACAGTCCTGTGCAGAACTGGAGTCAGTACTGCAAGACACATCTaGCTGCACCGACTGTCAGTT +
Preference number: 4 (lower is better)
Translates to: VHVNTQPRSTVLCRTGVSTARHI*LHRLSV
Trigger: AACTGACAGTCGGTGCAGGCAGATGTGTCTTGCAGT...ACTGACTCCAGTTCTGCACAGGACTGTGCTTCTCGGTTGTGTGTTAACATGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGACTCTCTTGTCTACTCTaGATCAGTACAGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: STQSVRAPEVAMILQRSRLSCLL*ISTDWG
Trigger: TCCCCAGTCTGTACTGATGCAGAGTAGACAAGAGAG...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACACTGGCCTTAAGGTaGTCTTCCCTGAAACGGCAG +
Preference number: 4 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLTLALR*SSLKRQ
Trigger: CTGCCGTTTCAGGGAAGAGCACCTTAAGGCCAGTGT...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGTCGTACTTGGCTGTGTaGCCCAGTGTTCTGATCCTG +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKSYLAV*PSVLIL
Trigger: CAGGATCAGAACACTGGGGCACACAGCCAAGTACGA...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: TLLKMAGATGALSCEELPPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAAGAAGGTCACCACGCTaGCAATCACCACCACAATGG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERRRSPR*QSPPQW
Trigger: CCATTGTGGTGGTGATTGCCAGCGTGGTGACCTTCT...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCTTTTGGGGGTCAGCTTaGGCGAGTTCTGGATACTGG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRFWGSA*ASSGYW
Trigger: CCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAA...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATAACCAGGAAACCAGTTTACCCTCTTaGATCTCCAGATCGATGCTG +
Preference number: 4 (lower is better)
Translates to: AEGGAAYIQHEKGHNNQETSLPS*ISRSML
Trigger: CAGCATCGATCTGGAGATCCAAGAGGGTAAACTGGT...TTCCTGGTTATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGTCTAGAAGCGTCATCTaGCCTAAAATGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: PARRNVSVIPILDGGSEKSRSVI*PKMAEM
Trigger: CATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGA...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ATTGTCCTTCATGCTGTCACTCACCGAGGTCTCGTTCCCTCGAGTCACAGTGGTTCTAGAAGCGTCATCTaGCCTAAAATGGCTGAAATG +
Preference number: 4 (lower is better)
Translates to: IVLHAVTHRGLVPSSHSGSRSVI*PKMAEM
Trigger: CATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGA...ACCACTGTGACTCGAGGGAACGAGACCTCGGTGAGTGACAGCATGAAGGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCA +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEMNISA*NGSRTS
Trigger: TGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCAT...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GATCTCAACTGGCGGTGTCTCTCCCAGCAACAGGTTATTAAAAATGGTAGCATAGGACAGCATAAGAGATaGCGAGACCCGCATAGGCTG +
Preference number: 4 (lower is better)
Translates to: DLNWRCLSQQQVIKNGSIGQHKR*RDPHRL
Trigger: CAGCCTATGCGGGTCTCGCCATCTCTTATGCTGTCC...TATGCTACCATTTTTAATAACCTGTTGCTGGGAGAGACACCGCCAGTTGAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAGCAGGCGATGGGCAATaGTCAGCATGGTACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIAAGDGQ*SAWYSL
Trigger: CAGACTGTACCATGCTGACCATTGCCCATCGCCTGC...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCCTGCCACTGAACTGTaGAGGTGTGGGAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLPATEL*RCGNRQ
Trigger: TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCTATTGTAGGCGTGGATaGTGGCAAGGCCCTGTATGC +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGYCRRG*WQGPVC
Trigger: GCATACAGGGCCTTGCCACCATCCACGCCTACAATA...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCAATGACAGACAAAAATaGAGGCCAGACACCACGGTC +
Preference number: 4 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVNDRQK*RPDTTV
Trigger: GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAAGCTCTTAGCTTTCCCTaGCAGCTAGAACAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKALSFP*QLEQFP
Trigger: AGGAAACTGTTCTAGCTGCCAGGGAAAGCTAAGAGC...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCTGGGGAGCCCGTATGTaGGCAGTCTGTCCTTACACA +
Preference number: 4 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCWGARM*AVCPYT
Trigger: TGTGTAAGGACAGACTGCCCACATACGGGCTCCCCA...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp ACGCACAGTACAAGCAGTACTACTGCTCCGATGCCTCAAGGCAAATGTGTAGAGGTAAGTGTAGCAATGTaGCTACACAGGACCACACTG +
Preference number: 4 (lower is better)
Translates to: THSTSSTTAPMPQGKCVEVSVAM*LHRTTL
Trigger: CAGTGTGGTCCTGTGTAGCCACATTGCTACACTTAC...CTCTACACATTTGCCTTGAGGCATCGGAGCAGTAGTACTGCTTGTACTGTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGACCAGTGCTTCTCTCTaGGTAGCAGAGTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKTSASL*VAELWV
Trigger: CACCCACAACTCTGCTACCCAGAGAGAAGCACTGGT...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CCA 90 bp CTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTAATACTACATACTCTGCTGAGGTGGGAGGATaGCCTCAGGCCAGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LPAGIQESKLVICNTTYSAEVGG*PQARSL
Trigger: CAAACTCCTGGCCTGAGGCCATCCTCCCACCTCAGC...AGAGTATGTAGTATTACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446941.2
3UTR CAA 72 bp ACACTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACT +
Preference number: 4 (lower is better)
Translates to: TLISKSCLKLQT*RGERERDCATT
Trigger: AGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp GCAAGGCCAATATCACTGATTCTCACTCCATCAATCTaGATGCAGCCTCCAGATAACTCCACCAGACGGAAG +
Preference number: 4 (lower is better)
Translates to: ARPISLILTPSI*MQPPDNSTRRK
Trigger: CTTCCGTCTGGTGGAGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GGTACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTAACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: GTLLKMAGATGALSCEELTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...TAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCACCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGAGGATAAAAACAGCTaGTCCCAGGAAGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGEDKNS*SQEACW
Trigger: CCAACAGGCTTCCTGGGATCAGCTGTTTTTATCCTC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTGACAATGTGCAGGACTaGAAAGAGGATGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVDNVQD*KEDDKG
Trigger: CCCCTTGTCATCCTCTTTTCAGTCCTGCACATTGTC...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCCAAGGCCAATATCACTaGTTCTCACTCCATCAATCT +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETQGQYH*FSLHQS
Trigger: AGATTGATGGAGTGAGAATCAGTGATATTGGCCTTG...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGAACAGCACCGGCTCTTaGGGAATGATAGAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARNSTGS*GMIESL
Trigger: CAAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTT...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTGAAGGGGTCCAAATTTaGTCTGACAGTGCCACTGAA +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFEGVQI*SDSATE
Trigger: TTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTC...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGTGCGACGACTGCGGTaGGAAAGGAAAACAGACCCA +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEVRRLR*ERKTDP
Trigger: TGGGTCTGTTTTCCTTTCTCACCGCAGTCGTCGCAC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGCCTGTATGCTGGACGTaGTGTGGGAGAGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEPVCWT*CGRGKV
Trigger: CACCTTTCCTCTCCCACATCACGTCCAGCATACAGG...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTACCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGCTCCTGAGGTTGCAATaGTTCTGCAACGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: IGDFRFQELLYSTSPLPQLLRLQ*FCNGVD
Trigger: ATCTACTCCGTTGCAGAATCATTGCAACCTCAGGAG...CTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGACAGCACTCAATCAGTaGGGGCTCCTGAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMTALNQ*GLLRLQ
Trigger: TTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGT...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCACACTGTACAGCAGGTaGAGCATTGCAGTAACATAC +
Preference number: 4 (lower is better)
Translates to: LGHHCIQPGCWFTSKKIGTLYSR*SIAVTY
Trigger: GTATGTTACTGCAATGCTTCACCTGCTGTACAGTGT...GCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAACACTGTACAGCAGGTaGAGCATTGCAGTAACATAC +
Preference number: 4 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSTLYSR*SIAVTY
Trigger: GTATGTTACTGCAATGCTTCACCTGCTGTACAGTGT...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTCTCCAAAGGAAGGCTaGACTCTTGGCGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: LEVATLNSKTQTLSGLISSPKEG*TLGERF
Trigger: GAATCTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGA...AGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGGCCCAGGAAACAGAGTaGACGTCAAAGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMAQETE*TSKALL
Trigger: CAAGAGAGCCTTTGACGTTCACTCTGTTTCCTGGGC...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp GGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTCCTGTAGTGAAACAATaGCAGAAGCTCTTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLEVATLNSKTQTLSGLIPVVKQ*QKLFLG
Trigger: CCCCAAGAAGAGCTTCTGTCATTGTTTCACTACAGG...AATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGCTACCAAGGTTCGGTaGAACCCGAGCAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLATKVR*NPSRDK
Trigger: CTTGTCCCTGCTCGGGTTTCACCGAACCTTGGTAGC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCCCCAAATCCAGATCCTaGCAGCACCAAGCAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISPKSRS*QHQASC
Trigger: GCAGCTTGCTTGGTGCTGTCAGGATCTGGATTTGGG...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTCTCCAAAGGAAGGCTaGAAGGACAGCAGGTGGTTG +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFSPKEG*KDSRWL
Trigger: CAACCACCTGCTGTCCTTTCAGCCTTCCTTTGGAGA...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGACCCGAGCATGAGCCCTaGAGCAAAACAAGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERPEHEP*SKTSLY
Trigger: ATAAAGGCTTGTTTTGCTGCAGGGCTCATGCTCGGG...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265586.10
CDS-3UTR GCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACAC +
Preference number: 4 (lower is better)
Translates to: KYHLQRASHKHCTAGEALCASQK*WFSPSH
Trigger: GTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACA...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGACGTCAGAAGACTCGTaGTTGGACAGAGACCACACG +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMTSEDS*LDRDHT
Trigger: CGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGACGT...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGTTACATTATAAATCATaGCTAAGATGGCAACAACGG +
Preference number: 4 (lower is better)
Translates to: VADFEGRERERLCDDCGELHYKS*LRWQQR
Trigger: CCGTTGTTGCCATCTTAGGCATGATTTATAATGTAA...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GATCTCAACTGGCGGTGTCTCTCCCAGCAACAGGTTATTAAAAATGGTAGCATATCAGTGCGCTGCAGCTaGCTCACCTTCTCTTTCTTG +
Preference number: 4 (lower is better)
Translates to: DLNWRCLSQQQVIKNGSISVRCS*LTFSFL
Trigger: CAAGAAAGAGAAGGTGAGGCAGCTGCAGCGCACTGA...TATGCTACCATTTTTAATAACCTGTTGCTGGGAGAGACACCGCCAGTTGAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGTGGAGAGGGCGTAGATaGTGGCATAGTACTGCATAT +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEWRGRR*WHSTAY
Trigger: ATATGCAGTACTATGCCAGCATCTACGCCCTCTCCA...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCTCGGTACCTCATCTCTaGGTTCTCAAAGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRSVPHL*VLKGHL
Trigger: GAGGTGACCTTTGAGAACGCAGAGATGAGGTACCGA...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGGCTATGCACAAGAGCTaGCGTTCCCCCACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEAMHKS*RSPTEK
Trigger: CTTCTCAGTGGGGGAACGGCAGCTCTTGTGCATAGC...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGGGTACAGTCTGCAAATaGTTCTCGGATGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARGTVCK*FSDGLL
Trigger: CAAGAGACCATCCGAGAAGCATTTGCAGACTGTACC...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCGGTACAGTCTGCAAATaGTTCTCGGATGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSGTVCK*FSDGLL
Trigger: CAAGAGACCATCCGAGAAGCATTTGCAGACTGTACC...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCAGACTGTGCGACGACTaGGGTGAGAAAGGAAAACAG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRRLCDD*GEKGKQ
Trigger: CTGTTTTCCTTTCTCACCGCAGTCGTCGCACAGTCT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LGHHCIQPGCWFTSKKIGCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...GCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TTTCCAGTATGCAATCCAAAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: FPVCNPKCGTESQGQSPLTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...AAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGATTGCATACTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGTTTATTCGCAAAGCCTaGATATGGTGCTACCCAGAG +
Preference number: 4 (lower is better)
Translates to: YQADSTQSVRAPEVAMILFIRKA*IWCYPE
Trigger: CTCTGGGTAGCACCATATGCAGGCTTTGCGAATAAA...CAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACCCCATACCTTTAGAGTaGCATTTTTCAGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHPIPLE*HFSALG
Trigger: ACCCAGTGCTGAAAAATGGCACTCTAAAGGTATGGG...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp ATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: IGDFRFQELLYSTSPLPQVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...CTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTACAGGGAAGCAGCGTCTaGCCCAACTTCATTCAGCTC +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLQGSSV*PNFIQL
Trigger: GAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTG...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGAAATCATGCCTAAGATaGCAACAACGGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARKSCLR*QQRVLQ
Trigger: CTGGAGGACCCGTTGTTGCCATCTTAGGCATGATTT...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGTCCCATGCCAAGGTaGCATTTTTCATCTCTATCT +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSPMPR*HFSSLS
Trigger: AGATAGAGATGAAAAATGCCACCTTGGCATGGGACT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCCCTCGAGTCACAGTaGTGTTCCCGCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESLESQ*CSRFLA
Trigger: AGCAAGGAAGCGGGAACACCACTGTGACTCGAGGGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTAGTCTGACCGTAAACTaGAACAGCCCCGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVSLTVN*NSPVNW
Trigger: CCAGTTAACGGGGCTGTTCCAGTTTACGGTCAGACT...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCAAGGGCATCCCAAATCTaGTCTTCAGTGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPRASQI*SSVYWL
Trigger: CAACCAGTACACTGAAGACCAGATTTGGGATGCCCT...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGACCGTGTGCAGGCGATaGGCAATGGTCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIETVCRR*AMVSMV
Trigger: TACCATGCTGACCATTGCCCATCGCCTGCACACGGT...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGGTTGGCTCCAGGGCTTaGAACCAACAGGTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKVGSRA*NQQVLE
Trigger: CTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAAC...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTACTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGTCAAGGAAAAACTGGTaGCATCCTTCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: HPSTQVPYSKGDCSCKSESRKNW*HPSGSF
Trigger: AAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGA...CTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCGGAAGGCTGAACTCTTaGCGAGAGATTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISGRLNS*REILPS
Trigger: GCTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCC...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CCA 90 bp GTTCATGTTAACACACAACCGAGAAGCACAGTCCTGTGCAGAACTGGAGTCAGTATGGTTAGAACTTACTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VHVNTQPRSTVLCRTGVSMVRTY*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCAT...ACTGACTCCAGTTCTGCACAGGACTGTGCTTCTCGGTTGTGTGTTAACATGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACCAGCTTACCCACATATaGAAAACGCACAGTACAAGC +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHQLTHI*KTHSTS
Trigger: GCTTGTACTGTGCGTTTTCCATATGTGGGTAAGCTG...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGCAGGTGGAGAGAGGTTaGAAGGGTGGGAAACTTACC +
Preference number: 4 (lower is better)
Translates to: FRFQELLYSTSPLPQIFRQVERG*KGGKLT
Trigger: GGTAAGTTTCCCACCCTTCCAACCTCTCTCCACCTG...CCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCCTTACCTGAACTCTTaGCGAGAGATTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMPYLNS*REILPS
Trigger: GCTGGGCAGAATCTCTCGCCAAGAGTTCAGGTAAGG...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTGGGTCACCACTGTATACACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: PLPQIFRFISIAWVTTVYTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...GTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GATCTCAACTGGCGGTGTCTCTCCCAGCAACAGGTTATTAAAAATGGTAGCATAACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: DLNWRCLSQQQVIKNGSITVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...TATGCTACCATTTTTAATAACCTGTTGCTGGGAGAGACACCGCCAGTTGAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGTTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: TIFKEHLTNTVQQVKHCSSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...ACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATACACGATGGACAGGATaGGCCTGGTGCGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YIETYRVELYRTSHLTGHTRWTG*AWCGRR
Trigger: TCTTCTGCCGCACCAGGCTCATCCTGTCCATCGTGT...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TATCCCCATTCTCCATCACTTCAGATTCAAGTTTCAGAGGTAGCTGAGCAATACAAGCCCAGGGTCATATaGACAGAGAAGGTCACCACG +
Preference number: 4 (lower is better)
Translates to: YPHSPSLQIQVSEVAEQYKPRVI*TEKVTT
Trigger: CGTGGTGACCTTCTCTGTTCATATGACCCTGGGCTT...GTATTGCTCAGCTACCTCTGAAACTTGAATCTGAAGTGATGGAGAATGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCACTAAAATGGCTGAAATaGGAGAGGTTTTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LTETVSDTRTEGRSPENSLKWLK*ERFFHF
Trigger: GAAGTGGAAAAACCTCTCTCATTTCAGCCATTTTAG...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTCACTCCATCAATCTTaGTGCAGCCTCCAGATAACT +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARSLHQS*CSLQIT
Trigger: AGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGA...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCATCACTCCATCAATCTTaGTGCAGCCTCCAGATAACT +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPSLHQS*CSLQIT
Trigger: AGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGA...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGATCTCTGTGGATAGACTaGTTCTTGTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRSLWID*FLFRNN
Trigger: GTTGTTTCTAAACAAGAATCAGTCTATCCACAGAGA...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCACCCCTTTTCCTCACGTaGAGCAACTCAGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPPLFLT*SNSVRW
Trigger: CCATCTTACTGAGTTGCTTCACGTGAGGAAAAGGGG...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLSKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACAAAAATGGAGGCCAGACACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAATCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: TKMEARHHGLEVATLNSKSQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...TTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTGTCTGGCCTCCATTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: WVTTVYSRVAGLLARRLAAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCACAGCACTCAATCAGTaGGGGCTCCTGAGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSTALNQ*GLLRLQ
Trigger: TTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGT...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCAAACATTACCTTACCTaGACTCTTGGCGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVKHYLT*TLGERF
Trigger: GAATCTCTCGCCAAGAGTTCAGGTAAGGTAATGTTT...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAAGAGAGGTGCAAAGATaGGACACTGGATCAAGACCA +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERREVQR*DTGSRP
Trigger: TGGTCTTGATCCAGTGTCTCATCTTTGCACCTCTCT...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGATTTTTAATATGCTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTTGTTTGACGCTGCAGTaGGCCATGGTCATGCCACCG +
Preference number: 4 (lower is better)
Translates to: LIFNMLPAGIQESKLVICCLTLQ*AMVMPP
Trigger: CGGTGGCATGACCATGGCTCACTGCAGCGTCAAACA...ACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAGCATATTAAAAATCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR GCA 90 bp AATACCAGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCATACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: NTRCPLGPRRSPPIRFLPYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...TGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCTGGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: TLLKMAGATGALSCEELPYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCGGTAGGAGGACGCGATGAGGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: CAKDKIEKGKVSVGGRDEVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...CTCATCGCGTCCTCCTACCGAAACCTTGCCTTTCTCGATTTTATCTTTCGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: YQADSTQSVRAPEVAMILSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...CAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CTGCCCTCTAGAAGCGTCATCTGGCCTAAAATGGCTGAAATGAGAGAGGTTTTTGGTTCGGTAATTCAATaGCCAAGTCAGTGCAAGCGA +
Preference number: 4 (lower is better)
Translates to: LPSRSVIWPKMAEMREVFGSVIQ*PSQCKR
Trigger: TCGCTTGCACTGACTTGGGCATTGAATTACCGAACC...AAAAACCTCTCTCATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGAGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp TATCCCCATTCTCCATCACTTCAGATTCAAGTTTCAGAGGTAGCTGAGCAATACTGTGAAAGCCTGTGCTaGTGTCAGATCGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YPHSPSLQIQVSEVAEQYCESLC*CQIEAQ
Trigger: CTGGGCTTCGATCTGACAGCAGCACAGGCTTTCACA...GTATTGCTCAGCTACCTCTGAAACTTGAATCTGAAGTGATGGAGAATGGGGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGTGGGAGGAGTCCCATaGCAAGGTGGCATTTTTCAT +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCVGGVP*QGGIFH
Trigger: ATGAAAAATGCCACCTTGGCATGGGACTCCTCCCAC...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGCCTTTCTCTTCCAGCTaGACAAGCTGCCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEPFSSS*TSCPSS
Trigger: AGAGGAAGGGCAGCTTGTGCAGCTGGAAGAGAAAGG...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTAGCGACCTTGTTCTCTaGAGCAGCAAACATGGCATA +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVSDLVL*SSKHGI
Trigger: TATGCCATGTTTGCTGCTGCAGAGAACAAGGTCGCT...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CTGCCCTCTAGAAGCGTCATCTGGCCTAAAATGGCTGAAATGAGAGAGGTTTTTACCCTGGAGACAATGTaGAGGACTGAAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: LPSRSVIWPKMAEMREVFTLETM*RTEKRM
Trigger: CATCCTCTTTTCAGTCCTGCACATTGTCTCCAGGGT...AAAAACCTCTCTCATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGAGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAAGACACATCTGCCTaGACCGACTGTCAGTTCATG +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMQDTSA*TDCQFM
Trigger: CATGAACTGACAGTCGGTGCAGGCAGATGTGTCTTG...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATACCAAGAGAGAGCACTaGAGGAGGCGGCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHTKREH*RRRPSL
Trigger: AAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGT...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACCAGCACCAAGCAAGCTaGAGGTGGAGAGAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: NTAILKILKNSFCHWFHYQHQAS*RWREVG
Trigger: TCCAACCTCTCTCCACCTGCAGCTTGCTTGGTGCTG...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGCGTCCCAGAAGTGCTaGTTCTCTCCCTCACACTTC +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLASQKC*FSPSHF
Trigger: GAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: LEVATLNSKTQTLSGLISVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...AGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCGATGGTACTTTCCCTTaGGATGCTCCTCATCCAGGA +
Preference number: 4 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCDGTFP*DAPHPG
Trigger: TCCTGGATGAGGAGCATCCCAAGGGAAAGTACCATC...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAACCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAAAATCATGCCTAAGATaGCAACAACGGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERKSCLR*QQRVLQ
Trigger: CTGGAGGACCCGTTGTTGCCATCTTAGGCATGATTT...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTTGCAAACATCATTGCTaGGTAAAAGAGGATAAAAAC +
Preference number: 4 (lower is better)
Translates to: AALLTETVSDTRTEGRSPCKHHC*VKEDKN
Trigger: GTTTTTATCCTCTTTTACCCAGCAATGATGTTTGCA...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCTGGATACTGGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTAAGTCCCATGCCAAGGTaGCATTTTTCATCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SGYWSGRSPMPRWHFSSLSPMPR*HFSSLS
Trigger: AGATAGAGATGAAAAATGCCACCTTGGCATGGGACT...TAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCACCAGTTTACCCTCTTaGATCTCCAGATCGATGCTG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRTSLPS*ISRSML
Trigger: CAGCATCGATCTGGAGATCCAAGAGGGTAAACTGGT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCGCACTATTGAAGATGTaGTTGCCCACATGGGCATCT +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRALLKM*LPTWAS
Trigger: AGATGCCCATGTGGGCAACCACATCTTCAATAGTGC...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCAGAGGGCGTAGATGCTaGCATAGTACTGCATATGAG +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRRGRRC*HSTAYE
Trigger: CTCATATGCAGTACTATGCCAGCATCTACGCCCTCT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAATCAGAATCTTACAGTaGCGGAGCAGGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIAIRILQ*RSRALA
Trigger: AGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGAT...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACAAATGCTTCTCGGATaGTCTCTTGAATCAATAAGT +
Preference number: 4 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRQMLLG*SLESIS
Trigger: ACTTATTGATTCAAGAGACCATCCGAGAAGCATTTG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTGCCCTCTAGAAGCGTCATCTGGCCTAAAATGGCTGAAATGAGAGAGGTTTTTGGGCAATGGTCAGCATaGTACAGTCTGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: LPSRSVIWPKMAEMREVFGQWSA*YSLQML
Trigger: AAGCATTTGCAGACTGTACCATGCTGACCATTGCCC...AAAAACCTCTCTCATTTCAGCCATTTTAGGCCAGATGACGCTTCTAGAGGGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGGAACCTGAGGCAGTaGGACTCTCTGTGGATAGAC +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKRNLRQ*DSLWID
Trigger: GTCTATCCACAGAGAGTCCCACTGCCTCAGGTTCCT...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGTAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: TIFKEHLTNTVQQVKHCSSNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...ACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: CSCKSELNDRQKWRPDTTIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...CGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTAATGACAGACAAAAATaGAGGCCAGACACCACGGTC +
Preference number: 4 (lower is better)
Translates to: LEVATLNSKTQTLSGLISNDRQK*RPDTTV
Trigger: GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATT...AGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGTCAAGGAAAAACTGGTaGCATCCTTCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: YQADSTQSVRAPEVAMILSRKNW*HPSGSF
Trigger: AAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGA...CAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TCCAAAGTAGTATATCAGGCTGACAGCACTCAATCAGTGAGGGCTCCTGAGGTTGACTGTCGGAAAGGATaGTTAGAACTTACTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SKVVYQADSTQSVRAPEVDCRKG*LELTGP
Trigger: TGGACCAGTAAGTTCTAACCATCCTTTCCGACAGTC...AACCTCAGGAGCCCTCACTGATTGAGTGCTGTCAGCCTGATATACTACTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGCTGCCTCCAGGCACTTaGTATGTTCCCGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVLPPGT*YVPGAG
Trigger: GCCAGCACCGGGAACATACCAAGTGCCTGGAGGCAG...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TTTCCAGTATGCAATCCAAAATGTGGAACTGAGTCACAGGGCCAAAGCCCCCTTAAATGCCATTTTATTTaGGGAGCCCGTATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: FPVCNPKCGTESQGQSPLKCHFI*GARMWA
Trigger: TGCCCACATACGGGCTCCCCAAATAAAATGGCATTT...AAGGGGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGATTGCATACTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCAGCATCAGCTGGCTaGCAGGTAAAAACAAACAGA +
Preference number: 4 (lower is better)
Translates to: GLEVATLNSKTQTLSGLISASAG*QVKTNR
Trigger: TCTGTTTGTTTTTACCTGCCAGCCAGCTGATGCTGA...AATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATAACAGCTTCTGTCACTaGTTCCACTACAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: STQVPYSKGDCSCKSELNNSFCH*FHYRET
Trigger: AGTCTCTCTGTAGTGGAACCAGTGACAGAAGCTGTT...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATATAGCTGTCTGGCTGTaGAAAGCATTCCCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: STQVPYSKGDCSCKSELNIAVWL*KAFPVN
Trigger: ATTCACTGGGAATGCTTTCCACAGCCAGACAGCTAT...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CAA 72 bp CAGTGTGAGACACTGATTAGCAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: QCETLISKSCLK*QTLRGERERDC
Trigger: ACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAGTGTCTCACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
3UTR CAA 72 bp ACTGTCTTGGACTTGAGATGTTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACATGGGCATCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: TVLDLRCFRIAL*KMWLPTWASKA
Trigger: TGCCTTAGATGCCCATGTGGGCAACCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAAACGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGT +
Preference number: 4 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKTVEFS*TWNLHG
Trigger: ACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGT...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATCCAGGATTCTGAGCTaGGAATGCATGGAGGCATCA +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLSRILS*ECMEAS
Trigger: TGATGCCTCCATGCATTCTCAGCTCAGAATCCTGGA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATCCTCATCCAGGATTCTaGGCTGAGAATGCATGGAGG +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHPHPGF*AENAWR
Trigger: CCTCCATGCATTCTCAGCTCAGAATCCTGGATGAGG...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAGCGAAGGTTCCACTaGTTGCAATGCTGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEKRRFH*LQCCPL
Trigger: TAGAGGGCAGCATTGCAATCAGTGGAACCTTCGCTT...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATATTTTTCCTTCTTTACTaGTCCTGTTTTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIIFFLLY*SCFRTL
Trigger: AAGGGTCCTAAAACAGGATCAGTAAAGAAGGAAAAA...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp TCAGTGTACTGGTTGAAGGGGTCCAAATTTGATCTGACAGTGCCACTGAACAGCCAAGGCCAATATCACTaGTTCTCACTCCATCAATCT +
Preference number: 4 (lower is better)
Translates to: SVYWLKGSKFDLTVPLNSQGQYH*FSLHQS
Trigger: AGATTGATGGAGTGAGAATCAGTGATATTGGCCTTG...GCTGTTCAGTGGCACTGTCAGATCAAATTTGGACCCCTTCAACCAGTACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCTCTCTGTGGATAGACTaGTTCTTGTTTAGAAACAAC +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETSLWID*FLFRNN
Trigger: GTTGTTTCTAAACAAGAATCAGTCTATCCACAGAGA...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACC +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVKMAVQ*SLFPHT
Trigger: GGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTT...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGTCCAAAATGTGGAACTaGGTCACAGGGCCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLSKMWN*VTGPKP
Trigger: GGGCTTTGGCCCTGTGACTCAGTTCCACATTTTGGA...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATAGGAGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: IGDFRFQELLYSTSPLPQAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...CTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCTCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTCTCCTGAGGTTGCAATaGTTCTGCAACGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFLLRLQ*FCNGVD
Trigger: ATCTACTCCGTTGCAGAATCATTGCAACCTCAGGAG...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGTGCAGTAACATACATTaGAACATACAGAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HPSTQVPYSKGDCSCKSECSNIH*NIQSRV
Trigger: AACTCGACTCTGTATGTTTCAATGTATGTTACTGCA...CTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCACACTGTACAGCAGGTaGAGCATTGCAGTAACATAC +
Preference number: 4 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSTLYSR*SIAVTY
Trigger: GTATGTTACTGCAATGCTTCACCTGCTGTACAGTGT...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTTGACTCTCTCATTCTaGCCGCAGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFLTLSF*PQNTAI
Trigger: GATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAA...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGTTTGACTCTCTCATTCTaGCCGCAGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: TIFKEHLTNTVQQVKHCSLTLSF*PQNTAI
Trigger: GATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAA...ACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCATTGACTCTCTCATTCTaGCCGCAGAATACAGCCATC +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPLTLSF*PQNTAI
Trigger: GATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAA...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000382494.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACAGATTCTGCCCAGCTTaGCTCTCTCATTCTGACCGC +
Preference number: 4 (lower is better)
Translates to: NTAILKILKNSFCHWFHYRFCPA*LSHSDR
Trigger: GCGGTCAGAATGAGAGAGTCAAGCTGGGCAGAATCT...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCTCTCCAAAGGAAGGCTaGACTCTTGGCGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSSPKEG*TLGERF
Trigger: GAATCTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGA...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGACAGATTAAGCTAGTTTaGAAGTCGTGCCAGATTAGA +
Preference number: 4 (lower is better)
Translates to: STQSVRAPEVAMILQRSRQIKLV*KSCQIR
Trigger: TCTAATCTGGCACGACTTTCAAACTAGCTTAATCTG...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAACCCAAATCCAGATCCTaGCAGCACCAAGCAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKEPKSRS*QHQASG
Trigger: ACCACTTGCTTGGTGCTGTCAGGATCTGGATTTGGG...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443376.5
CDS-3UTR GCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGCTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACG +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVLKPAS*VIIRHT
Trigger: CGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAG...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCTTAATTCTGGCAGGTaGTTCCAAGGACAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLLNSGR*FQGQSL
Trigger: AAGACTCTGTCCTTGGAAGCACCTGCCAGAATTAAG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTATGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCACACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTGCTGAGCACAACCTCTaGAACAGAATAAGAGTGTTA +
Preference number: 4 (lower is better)
Translates to: GLEVATLNSKTQTLSGLIAEHNL*NRIRVL
Trigger: TAACACTCTTATTCTGTTGCAGAGGTTGTGCTCAGC...AATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: GGILLGLFKSLHLKINLDQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGAAGACTCGTGCTTaGACAGAGACCACACGTCTT +
Preference number: 4 (lower is better)
Translates to: KYHLQRASHKHCTAGEALQKTRA*TETTRL
Trigger: AAGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTG...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACATGAACATCTCGGCCTaGAACGGCAGCCGCACGTCA +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNMNISA*NGSRTS
Trigger: TGACGTGCGGCTGCCGTTCCAGGCCGAGATGTTCAT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGACCAGGATAACGTTCTaGATGAACATCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIETRITF*MNISAW
Trigger: CCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGT...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCATCCAGCAGCTCCTaGTATCTGGAGACAATGTGC +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESSSSS*YLETMC
Trigger: GCACATTGTCTCCAGATACCAGGAGCTGCTGGATGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265586.10
CDS-3UTR CCA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCCAAATGCTTCTCGGATaGTCTCTTGAATCAATAAGT +
Preference number: 4 (lower is better)
Translates to: TIATRLPLDTQKTWHRETQMLLG*SLESIS
Trigger: ACTTATTGATTCAAGAGACCATCCGAGAAGCATTTG...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATAATGACAGACAAAAATaGAGGCCAGACACCACGGTC +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNNDRQK*RPDTTV
Trigger: GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATT...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGAATGACAGACAAAAATaGAGGCCAGACACCACGGTC +
Preference number: 4 (lower is better)
Translates to: IQPGCWFTSKKIGFFSSMNDRQK*RPDTTV
Trigger: GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATT...CATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCCTGGTGGCATCCTTCTaGGTCTTTTCAAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISLVASF*VFSSPC
Trigger: GCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAG...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTGTACTCTGCTCAAAATaGCTGGTGCTACTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: LLYSTSPLPQIFRFISIAVLCSK*LVLLVH
Trigger: GTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTAC...AGCAATGGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTAGTCCTGTGCAGAACTaGAGTCAGTTCCATTTCACC +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFSPVQN*SQFHFT
Trigger: GGTGAAATGGAACTGACTCCAGTTCTGCACAGGACT...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCGTCACCAAAACCTTaGATCATCTTGGTGTATAAA +
Preference number: 4 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLASPKP*IILVYK
Trigger: TTTATACACCAAGATGATCCAAGGTTTTGGTGACGC...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTGGGTCACCACTGTATACACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: PLPQIFRFISIAWVTTVYTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...GTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGATATGCTGTGAGCCGTaGTGCAAACATCATTGCTGG +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEICCEP*CKHHCW
Trigger: CCAGCAATGATGTTTGCATCACGGCTCACAGCATAT...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCCAAGGCCAATATCACTaGTTCTCACTCCATCAATCT +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGQGQYH*FSLHQS
Trigger: AGATTGATGGAGTGAGAATCAGTGATATTGGCCTTG...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCTCTCGGATGGTCTCTTaGATCAATAAGTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGSRMVS*INKSVS
Trigger: AGAGACAGACTTATTGATTCAAGAGACCATCCGAGA...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGCACACACCTCGGCACTaGTGGAGCAGTCTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRHTPRH*WSSLQR
Trigger: CCTTTGGAGACTGCTCCATCAGTGCCGAGGTGTGTG...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGAAGATGGCGGTGCAGTaGAGCCTGTTCCCACACACC +
Preference number: 4 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRKMAVQ*SLFPHT
Trigger: GGTGTGTGGGAACAGGCTTCACTGCACCGCCATCTT...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAACTCCTGAGGTTGCAATaGTTCTGCAACGGAGTAGAT +
Preference number: 4 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKLLRLQ*FCNGVD
Trigger: ATCTACTCCGTTGCAGAATCATTGCAACCTCAGGAG...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATATCAGTGAGGGCTCCTaGGGTTGCAATGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHISEGS*GCNDSA
Trigger: TGCAGAATCATTGCAACCTCAGGAGCCCTCACTGAT...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACTGCAGTAACATACATTaGAACATACAGAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHCSNIH*NIQSRV
Trigger: AACTCGACTCTGTATGTTTCAATGTATGTTACTGCA...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GTTCATGTTAACACACAACCGAGAAGCACAGTCCTGTGCAGAACTGGAGTCAGTGTGTTTCATTTGTTCTaGTTATGGCTACCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: VHVNTQPRSTVLCRTGVSVFHLF*LWLPRF
Trigger: GAACCTTGGTAGCCATAATCAGAACAAATGAAACAC...ACTGACTCCAGTTCTGCACAGGACTGTGCTTCTCGGTTGTGTGTTAACATGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCTACTTTCCCTTGGGATaGTCCTCATCCAGGATTCTG +
Preference number: 4 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSYFPLG*SSSRIL
Trigger: CAGAATCCTGGATGAGGAGCATCCCAAGGGAAAGTA...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATAGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: FQELLYSTSPLPQIFRFIALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...TATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATGCATTGTCCACTGGGTaGTGGTGTTTGGAAGTAGTC +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHALSTG*WCLEVV
Trigger: GACTACTTCCAAACACCAGCACCCAGTGGACAATGC...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TLLKMAGATGALSCEELPSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCATAATAACCAGGAATaGCAAGGGGCCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNHNNQE*QGAPSS
Trigger: GCTGCTGGGGGCCCCTTGGCATTCCTGGTTATTATG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TATCCCCATTCTCCATCACTTCAGATTCAAGTTTCAGAGGTAGCTGAGCAATACTGGAGAGGGCGTAGATaGTGGCATAGTACTGCATAT +
Preference number: 4 (lower is better)
Translates to: YPHSPSLQIQVSEVAEQYWRGRR*WHSTAY
Trigger: ATATGCAGTACTATGCCAGCATCTACGCCCTCTCCA...GTATTGCTCAGCTACCTCTGAAACTTGAATCTGAAGTGATGGAGAATGGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTATCTGGAGACAATGTaGAGGACTGAAAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVYLETM*RTEKRM
Trigger: CATCCTCTTTTCAGTCCTGCACATTGTCTCCAGATA...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265586.10
CDS-3UTR GCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGCTTCTGTCTCAGATaGCAGTCTGACCGTAAACTG +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKSFCLR*QSDRKL
Trigger: CAGTTTACGGTCAGACTGGCATCTGAGACAGAAGCT...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGGCAGGGAATGGCAATaGTCTAAAGAAAAGAGACTT +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLGREWQ*SKEKRL
Trigger: AAGTCTCTTTTCTTTAGAGCATTGCCATTCCCTGCC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATTCAGTAAGATGGCGGTaGAGTGAAGCCTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YIETYRVELYRTSHLTGHSVRWR*SEACSH
Trigger: GTGGGAACAGGCTTCACTGCACCGCCATCTTACTGA...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGACCCTTCTACCCAGGTaGCTTATAGCAAAGGTGACT +
Preference number: 4 (lower is better)
Translates to: KYHLQRASHKHCTAGEALTLLPR*LIAKVT
Trigger: AGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGT...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAAGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: PYSKGDCSCKSELNDRQKAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...TTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTGCTCAAAATGGCTGGTaGTACTGGTGCACTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LLYSTSPLPQIFRFISIAAQNGW*YWCTKL
Trigger: CAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGC...AGCAATGGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAACTTCTCTGGCAACACTaGCCTTTCATCCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKELLWQH*PFILPA
Trigger: AGCTGGAAGGATGAAAGGGCAGTGTTGCCAGAGAAG...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACGGTGTAAGAAACAGGTaGCCAGGAAACAGAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GGILLGLFKSLHLKINLDGVRNR*PGNRVN
Trigger: GTTCACTCTGTTTCCTGGGCACCTGTTTCTTACACC...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGGTTTCCAAGGCATCTTaGCATTCCAACGGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: GLFTVQKLLRQCETLISKVSKAS*HSNGRV
Trigger: AACTCGACCGTTGGAATGCCAAGATGCCTTGGAAAC...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCCCAGCATTGTCCACTaGGTGCTGGTGTTTGGAAGT +
Preference number: 4 (lower is better)
Translates to: YIETYRVELYRTSHLTGHPSIVH*VLVFGS
Trigger: ACTTCCAAACACCAGCACCCAGTGGACAATGCTGGG...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATATGCAAACATCATTGCTaGGTAAAAGAGGATAAAAAC +
Preference number: 4 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIICKHHC*VKEDKN
Trigger: GTTTTTATCCTCTTTTACCCAGCAATGATGTTTGCA...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCAGTCCCATGCCAAGGTaGCATTTTTCATCTCTATCT +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRSPMPR*HFSSLS
Trigger: AGATAGAGATGAAAAATGCCACCTTGGCATGGGACT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGAGGTACTGTAACTGGTaGGTAACAAACAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLRYCNW*VTNRTV
Trigger: GACAGTTCTGTTTGTTACCCACCAGTTACAGTACCT...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TCATCTAAAATCAGAATCTTACAGTGGCGGAGCAGGGCTCTAGCTATGCACAAGAGGTACTGTAACTGGTaGGTAACAAACAGAACTGTC +
Preference number: 4 (lower is better)
Translates to: SSKIRILQWRSRALAMHKRYCNW*VTNRTV
Trigger: GACAGTTCTGTTTGTTACCCACCAGTTACAGTACCT...CTTGTGCATAGCTAGAGCCCTGCTCCGCCACTGTAAGATTCTGATTTTAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CCA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCACCAGGTACTGTAACTaGTGGGTAACAAACAGAACT +
Preference number: 4 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRTRYCN*WVTNRT
Trigger: AGTTCTGTTTGTTACCCACCAGTTACAGTACCTGGT...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp GAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCTGAGATTAGTCTCCAAAGGAAGGTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EFQNPDSLWVNFLFFLRLVSKGR*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCACCTTCCTTTGGAGAC...TAATCTCAGGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000392579.6
CDS-3UTR CCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHSNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAAAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKESNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: TLLKMAGATGALSCEELPIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: RTSHLTGHLVSDGCLTTHNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...GTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAGGAAAAACCTTGGATCATCTTaGTGTATAAATGTCAGCATC +
Preference number: 4 (lower is better)
Translates to: PLGPRRSPPIRFLPSPRKNLGSS*CINVSI
Trigger: GATGCTGACATTTATACACCAAGATGATCCAAGGTT...TTTCCTGGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGCTGAATATCATAGGTGAGGCCTaGTCTTTTAGAACTGTCTTA +
Preference number: 4 (lower is better)
Translates to: STQVPYSKGDCSCKSELNIIGEA*SFRTVL
Trigger: TAAGACAGTTCTAAAAGACCAGGCCTCACCTATGAT...ATTCAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AGACTTCAGATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTAACAGCTTCTGTCACTaGTTCCACTACAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: RLQIPRTTVFHLSPPSDFNSFCH*FHYRET
Trigger: AGTCTCTCTGTAGTGGAACCAGTGACAGAAGCTGTT...AAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATCTGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp CTGATTTTTAATATGCTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTGTCATCACAACACTTTaGGAGGCTGAGGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LIFNMLPAGIQESKLVICVITTL*EAEVGG
Trigger: TCCTCCCACCTCAGCCTCCCAAAGTGTTGTGATGAC...ACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAGCATATTAAAAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR TCA 90 bp TATCCCCATTCTCCATCACTTCAGATTCAAGTTTCAGAGGTAGCTGAGCAATACTCACTCCATCAATCTTaGTGCAGCCTCCAGATAACT +
Preference number: 4 (lower is better)
Translates to: YPHSPSLQIQVSEVAEQYSLHQS*CSLQIT
Trigger: AGTTATCTGGAGGCTGCATCAAGATTGATGGAGTGA...GTATTGCTCAGCTACCTCTGAAACTTGAATCTGAAGTGATGGAGAATGGGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LISKSCLKLQTLRGERERSFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTCTCGGATGGTCTCTTaGATCAATAAGTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCSRMVS*INKSVS
Trigger: AGAGACAGACTTATTGATTCAAGAGACCATCCGAGA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp GGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACAAATGGTGCACTAAGTTGTaGGGAATTACCTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GILLGLFKSLHLKINLDKWCTKL*GITSAR
Trigger: CCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCA...TTTGTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGTTTTTCCGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: ATLNSKTQTLSGLISCFSVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...GGAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCATCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: RVAGLLARRLASFPVCNPSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...TGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCACTGTGAAAGCCTGTaGTGCTGTCAGATCGAAGCC +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNHCESL*CCQIEA
Trigger: GGCTTCGATCTGACAGCAGCACAGGCTTTCACAGTG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTACACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACTTTTGGGGGTCAGCTTaGGCGAGTTCTGGATACTGG +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNFWGSA*ASSGYW
Trigger: CCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAA...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCCACACGTCTTCCTTTaGACACCCAGAAAACCTGGC +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNPHVFL*TPRKPG
Trigger: GCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCCTGCCACTGAACTGTaGAGGTGTGGGAATAGGCAA +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNPATEL*RCGNRQ
Trigger: TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGAGCAACTCAGTAAGATaGCGGTGCAGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMSNSVR*RCSEAC
Trigger: ACAGGCTTCACTGCACCGCCATCTTACTGAGTTGCT...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGTCTGCTCAAAATGGCTaGTGCTACTGGTGCACTAAG +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLSAQNG*CYWCTK
Trigger: CTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGA...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TACATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATGTACTCTGCTCAAAATaGCTGGTGCTACTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: YIETYRVELYRTSHLTGHVLCSK*LVLLVH
Trigger: GTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTAC...ATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGGCCATCCTGAAAATTTaGTCCACTGAAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMAILKI*STEASQ
Trigger: CTGGCTGGCTTCAGTGGACCAAATTTTCAGGATGGC...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000382494.6
CDS-3UTR CCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGAGAGGTTGGAAGGGTaGGAAACTTACCTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLERLEG*ETYLSK
Trigger: CTTAGAGAGGTAAGTTTCCCACCCTTCCAACCTCTC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATGTTAGCATAGCTGTCTaGCTGTGGAAAGCATTCCCA +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHVSIAV*LWKAFP
Trigger: TGGGAATGCTTTCCACAGCCAGACAGCTATGCTAAC...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
3UTR CAA 72 bp TGTAACTGGTGGGTAACAAACAGAACTGTCTTGGACTaGAGATGTTTCCGGATAGCACTATTGAAGATGTGG +
Preference number: 4 (lower is better)
Translates to: CNWWVTNRTVLD*RCFRIALLKMW
Trigger: CCACATCTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
3UTR CAA 72 bp AGGTACTGTAACTGGTGGGTAACAAACAGAACTGTCTaGGACTTGAGATGTTTCCGGATAGCACTATTGAAG +
Preference number: 4 (lower is better)
Translates to: RYCNWWVTNRTV*DLRCFRIALLK
Trigger: CTTCAATAGTGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTTACAGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp CCTCAAAAGGATTTAAGTCCACAGACAGGAGGTTTACTCACTGCTAGTACTAATACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: PQKDLSPQTGGLLTASTNTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...ATTAGTACTAGCAGTGAGTAAACCTCCTGTCTGTGGACTTAAATCCTTTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CTACCAGCAGGGATTCAGGAGAGCAAACTGGTAATATGTAATACTACATACTCTACCCAGGACTGGGGATaGTATACTCTTTTCCTATGT +
Preference number: 4 (lower is better)
Translates to: LPAGIQESKLVICNTTYSTQDWG*YTLFLC
Trigger: ACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGT...AGAGTATGTAGTATTACATATTACCAGTTTGCTCTCCTGAATCCCTGCTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS-3UTR TCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAGAGCACTCAAGCCATaGTGGTACTTTCCCTTGGGA +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVRALKP*WYFPLG
Trigger: TCCCAAGGGAAAGTACCATCATGGCTTGAGTGCTCT...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AACTGGTGGGTAACAAACAGAACTGTCTTGGACTTGAGATGTTTCCGGATAGCAAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: NWWVTNRTVLDLRCFRIASFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGTTACCCACCAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR TCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCTCGGATGGTCTCTTaGATCAATAAGTCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESRMVS*INKSVS
Trigger: AGAGACAGACTTATTGATTCAAGAGACCATCCGAGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCAGCAACCAGCAACCTaGGGTAGGTCTCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNQQPAT*GRSLYS
Trigger: ACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp CAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATCCTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: QELLYSTSPLPQIFRFISSQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...GGATATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGTCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: KYHLQRASHKHCTAGEALSQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTTGCAGTAACATACATTaGAACATACAGAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: LEVATLNSKTQTLSGLISCSNIH*NIQSRV
Trigger: AACTCGACTCTGTATGTTTCAATGTATGTTACTGCA...AGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAAACACTGTACAGCAGGTaGAGCATTGCAGTAACATAC +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKETLYSR*SIAVTY
Trigger: GTATGTTACTGCAATGCTTCACCTGCTGTACAGTGT...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGTACTTACCAAAACCATaGACCTCCAGCTTACCCACA +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLYLPKP*TSSLPT
Trigger: TGTGGGTAAGCTGGAGGTTCATGGTTTTGGTAAGTA...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp ACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCAGTAATCAAGAAAGCCCATaGTCACTTTATTCGCAAAGC +
Preference number: 4 (lower is better)
Translates to: TIFKEHLTNTVQQVKHCSNQESP*SLYSQS
Trigger: GCTTTGCGAATAAAGTGATCATGGGCTTTCTTGATT...ACTGCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATGGAAAGCATTCCCAGTaGATAAACATTACCTTACCT +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNGKHSQ*INITLP
Trigger: AGGTAAGGTAATGTTTATTCACTGGGAATGCTTTCC...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp TCGGCAAGGCCAATATCACTGATTCTCACTCCATCAATCTTGATGCAGCCTCCATTACATTATAAATCATaGCTAAGATGGCAACAACGG +
Preference number: 4 (lower is better)
Translates to: SARPISLILTPSILMQPPLHYKS*LRWQQR
Trigger: CCGTTGTTGCCATCTTAGGCATGATTTATAATGTAA...TGGAGGCTGCATCAAGATTGATGGAGTGAGAATCAGTGATATTGGCCTTGCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR GCA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGTGTATACAGCCGGGTTaGTGGTTTACTAGCAAGAAG +
Preference number: 4 (lower is better)
Translates to: IETYRVELYRTSHLTGHLCIQPG*WFTSKK
Trigger: CTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCCTTGCAGATCTACAGTaGGATGCTAATTCTTTATAC +
Preference number: 4 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSLADLQ*DANSLY
Trigger: GTATAAAGAATTAGCATCGCACTGTAGATCTGCAAG...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACACCAGGATAACGTTCTaGATGAACATCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNTRITF*MNISAW
Trigger: CCAGGCCGAGATGTTCATCCAGAACGTTATCCTGGT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACTCATCCAGCAGCTCCTaGTATCTGTGCAGAAACTCC +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNSSSSS*YLCRNS
Trigger: GGAGTTTCTGCACAGATACCAGGAGCTGCTGGATGA...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp ACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: TYRVELYRTSHLTGHLVSNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...GGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATACCAGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: NTRCPLGPRRSPPIRFLPNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...TGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCTGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTTTTTCCTTCTTTACTaGTCCTGTTTTAGGACCCTT +
Preference number: 4 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCFFLLY*SCFRTL
Trigger: AAGGGTCCTAAAACAGGATCAGTAAAGAAGGAAAAA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR TCA 90 bp TATCCCCATTCTCCATCACTTCAGATTCAAGTTTCAGAGGTAGCTGAGCAATACAGTTTCAGAGGTAGCTaGGCAATACATTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: YPHSPSLQIQVSEVAEQYSFRGS*AIHSFM
Trigger: CATGAAAGAATGTATTGCTCAGCTACCTCTGAAACT...GTATTGCTCAGCTACCTCTGAAACTTGAATCTGAAGTGATGGAGAATGGGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR TCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAATCCCAGGAAATAACCTaGTCAAATAGGAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKESQEIT*SNRRLQ
Trigger: CTGAAGTCTCCTATTTGATCAGGTTATTTCCTGGGA...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR TCA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATTGCAGTAACATACATTaGAACATACAGAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNCSNIH*NIQSRV
Trigger: AACTCGACTCTGTATGTTTCAATGTATGTTACTGCA...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGTGTCTCTCTAGTCTTCTaGAGTTCACGTCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: AGLLARRLASFPVCNPKCVSLVF*SSRQKT
Trigger: AGTCTTCTGACGTGAACTGCAGAAGACTAGAGAGAC...ACATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCTTACATTATAAATCATaGCTAAGATGGCAACAACGG +
Preference number: 4 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGLHYKS*LRWQQR
Trigger: CCGTTGTTGCCATCTTAGGCATGATTTATAATGTAA...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACAGCGACCTTGTTCTCTaGAGCAGCAAACATGGCATA +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNSDLVL*SSKHGI
Trigger: TATGCCATGTTTGCTGCTGCAGAGAACAAGGTCGCT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACCACCAATCAGATTTTTaGCAAGTCCCAGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: GGILLGLFKSLHLKINLDHQSDF*QVPGNN
Trigger: GTTATTTCCTGGGACTTGGCAAAAATCTGATTGGTG...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp GCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGTTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: AGLLARRLASFPVCNPKCYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...ACATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACTATTTGCCACAGACCTaGCAAACATGTGATAACTGC +
Preference number: 4 (lower is better)
Translates to: NTAILKILKNSFCHWFHYYLPQT*QTCDNC
Trigger: GCAGTTATCACATGTTTGGCAGGTCTGTGGCAAATA...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp GCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGTGAAAAAGCATGCTGCTaGTTTCCTGTTAAAGGAGGG +
Preference number: 4 (lower is better)
Translates to: AGLLARRLASFPVCNPKCEKACC*FPVKGG
Trigger: CCCTCCTTTAACAGGAAAGCAGCAGCATGCTTTTTC...ACATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACAGGGCATCCCAAATCTaGTCTTCAGTGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNRASQI*SSVYWL
Trigger: CAACCAGTACACTGAAGACCAGATTTGGGATGCCCT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAAATACAGCCGGGTTGCTaGTTTACTAGCAAGAAGATT +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKEIQPGC*FTSKKI
Trigger: AATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTAT...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATACAGCCATCCTGAAAATTCTAAAGAACAGCTTCTGTCACTGGTTCCACTACTCAAGGAAAAACTGGTaGCATCCTTCTGGGTCTTTT +
Preference number: 4 (lower is better)
Translates to: NTAILKILKNSFCHWFHYSRKNW*HPSGSF
Trigger: AAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGA...GTAGTGGAACCAGTGACAGAAGCTGTTCTTTAGAATTTTCAGGATGGCTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp GGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACAAACTTCTTGGGGGAAGCTaGCTCTATGAAAATGTTTGC +
Preference number: 4 (lower is better)
Translates to: GILLGLFKSLHLKINLDKLLGGS*LYENVC
Trigger: GCAAACATTTTCATAGAGCCAGCTTCCCCCAAGAAG...TTTGTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp TCGCAAAGCCTGCATATGGTGCTACCCAGAGGAATGAATTCTATGAGATCAGAGATGAAGTTCTTGCATTaGCCAAATGGAATCAAGAAA +
Preference number: 4 (lower is better)
Translates to: SQSLHMVLPRGMNSMRSEMKFLH*PNGIKK
Trigger: TTTCTTGATTCCATTTGGCCAATGCAAGAACTTCAT...CTCTGATCTCATAGAATTCATTCCTCTGGGTAGCACCATATGCAGGCTTTGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CCA 90 bp CCTCAAAAGGATTTAAGTCCACAGACAGGAGGTTTACTCACTGCTAGTACTAATAATGTCAGCATCAGCTaGCTGGCAGGTAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: PQKDLSPQTGGLLTASTNNVSIS*LAGKNK
Trigger: TTTGTTTTTACCTGCCAGCCAGCTGATGCTGACATT...ATTAGTACTAGCAGTGAGTAAACCTCCTGTCTGTGGACTTAAATCCTTTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGTATAGCAAAGGTGACTaGAGCTGTAAGTCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVYSKGD*SCKSEL
Trigger: CAGCTCTGACTTACAGCTGCAGTCACCTTTGCTATA...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR GCA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATAGTACCCCAGTGTTCTaGACCATAAATGAGAGAATA +
Preference number: 4 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHSTPVF*TINERI
Trigger: TATTCTCTCATTTATGGTGCAGAACACTGGGGTACT...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR GCA 90 bp CTTGACTCTCTCATTCTGACCGCAGAATACAGCCATCCTGAAAATTCTAAAGAAGAAGAAAAAGCATGCTaGTGCTTTCCTGTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: LDSLILTAEYSHPENSKEEEKAC*CFPVKG
Trigger: TCCTTTAACAGGAAAGCAGCAGCATGCTTTTTCTTC...TTCTTTAGAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR TCA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGGCTGTAAGTCAGAGCTaGATGACAGACAAAAATGGA +
Preference number: 4 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVAVSQS*MTDKNG
Trigger: TCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGC...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTGCAAACATCATTGCTaGGTAAAAGAGGATAAAAAC +
Preference number: 4 (lower is better)
Translates to: KSETHKPIRNCCAKDKIECKHHC*VKEDKN
Trigger: GTTTTTATCCTCTTTTACCCAGCAATGATGTTTGCA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR GCA 90 bp AAAAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTCATTCAGCTCTTCTTaGCACAGTCTCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KNIKVPSSKSISQTLYSRSFSSS*HSLSSL
Trigger: AAGACTAGAGAGACTGTGGCAAGAAGAGCTGAATGA...CCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp TGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGAACCCAGACTCTCTCTaGGTTAATTTCTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: CWFTSKKIGFFSSMQSKMNPDSL*VNFLFF
Trigger: GAAAAACAAGAAATTAACCCAGAGAGAGTCTGGGTT...CATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CCA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCAAATGCTTCTCGGATaGTCTCTTGAATCAATAAGT +
Preference number: 4 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNQMLLG*SLESIS
Trigger: ACTTATTGATTCAAGAGACCATCCGAGAAGCATTTG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS TCA 90 bp TCACATCAGAATTCTTCGAAGGTCGCTGGCGGCTCCGCTGCGGGTTaGGCAGGGTGCCCCGAGCCACCCGCTGCACAGCCTCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SHQNSSKVAGGSAAG*AGCPEPPAAQPPRW
Trigger: CCACCTGGGAGGCTGTGCAGCGGGTGGCTCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTCTGATGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS GCA 90 bp GGACAACCGCGCCAGCCGCTCAACCACGCTCCCGAGCATGAGCCCTaGAGCAAAACAAGCCTTTATAGCGGCATCGGCCGCCACACCGCG +
Preference number: 5 (lower is better)
Translates to: GQPRQPLNHAPEHEP*SKTSLYSGIGRHTA
Trigger: CGCGGTGTGGCGGCCGATGCCGCTATAAAGGCTTGTTTTGCTGCAGGGCTCATGCTCGGGAGCGTGGTTGAGCGGCTGGCGCGGTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265586.10
ENST00000446941.2
CDS GCA 90 bp GTTAGTTTCACATCAGAATTCTTCGAAGGTCGCTGGCGGCTCCGCTaGGGGTTGAGCAGGGTGCCCCGAGCCACCCGCTGCACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: VSFTSEFFEGRWRLR*GLSRVPRATRCTAS
Trigger: GGAGGCTGTGCAGCGGGTGGCTCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTCTGATGTGAAACTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS-3UTR CAA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGTGCCCACCGCTCAGGTaGGCTCCTCGCTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWCPPLR*APRSPI
Trigger: GATTGGAGAGCGAGGAGCCAACCTGAGCGGTGGGCA...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS GCA 90 bp CCCCCGCAAGCGGACACCGGTTCGGTAATTCAATGCCCAAGTCAGTaGAAGCGACCAAGACCGCACGATTTCCGTCAGGAGGAGGCCCAG +
Preference number: 5 (lower is better)
Translates to: PPQADTGSVIQCPSQ*KRPRPHDFRQEEAQ
Trigger: CTGGGCCTCCTCCTGACGGAAATCGTGCGGTCTTGGTCGCTTGCACTGACTTGGGCATTGAATTACCGAACCGGTGTCCGCTTGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCAACTTCATTCAGCTCTTCGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PHNPSQGSSVWPNFIQLFESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...GAAGAGCTGAATGAAGTTGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACGCTCGCAGCGTGCCCTaGACAAAGACAACTCCTCGA +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDARSVP*TKTTPR
Trigger: TCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAGC...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS CCA 90 bp GTTAGAGCTGGCCGTGGCCGGGCCCCTGGAGACTGTCGGAAAGGATaGTTAGAACTTACTGGTCCACTGAAGCCAGCCAGCTGCGTGATC +
Preference number: 5 (lower is better)
Translates to: VRAGRGRAPGDCRKG*LELTGPLKPASCVI
Trigger: GATCACGCAGCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCATCCTTTCCGACAGTCTCCAGGGGCCCGGCCACGGCCAGCTCTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp GATGAGCCTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: DEPGAAEDPHNPSQGSSVTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...GACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAGGCTCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CAA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATGCCCACCGCTCAGGTaGGCTCCTCGCTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: AWNQQVLELESSVQWPAICPPLR*APRSPI
Trigger: GATTGGAGAGCGAGGAGCCAACCTGAGCGGTGGGCA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AGCATAAGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGTGCCCACCGCTCAGGTaGGCTCCTCGCTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: SIRDGETRIGWGNLPVHKCPPLR*APRSPI
Trigger: GATTGGAGAGCGAGGAGCCAACCTGAGCGGTGGGCA...CTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCTTATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: AAVGSRAWNQQVLELESSTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: PARRNVSVIPILDGGSEKESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGGTGCGGCAGAAGATCCACACAACCCTTCGCAGGGAAGCAGCGTCTGGCCCATCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: LVRQKIHTTLRREAASGPSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...TGGGCCAGACGCTGCTTCCCTGCGAAGGGTTGTGTGGATCTTCTGCCGCACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CAA 90 bp CAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGGCTCGCAGCGTGCCCTaGACAAAGACAACTCCTCGA +
Preference number: 5 (lower is better)
Translates to: QQLAPGLGTNRSWSWRALARSVP*TKTTPR
Trigger: TCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAGC...CAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWSWLQG*EPTGLG
Trigger: TCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACT...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS GCA 90 bp AAGAGGTGTTTCACCATGAAGGCTGGTCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: KRCFTMKAGPLKPAS*VIIRHTMDRMSLVR
Trigger: CCGCACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGCCTTCATGGTGAAACACCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS CCA 90 bp TGGCCGGGCCCCTGGAGACTGTCGGAAAGGATGGTTAGAACTTACTaGTCCACTGAAGCCAGCCAGCTGCGTGATCATCAGGCACACGAT +
Preference number: 5 (lower is better)
Translates to: WPGPWRLSERMVRTY*STEASQLRDHQAHD
Trigger: ATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCATCCTTTCCGACAGTCTCCAGGGGCCCGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS CCA 90 bp GCTGAGGCGGGAGGCTTGCTTGAAGCTGGGAGTTCAACAACAGCCTaGCCAACAGTGAGAGTGCCTCGGTCGAGTTCTCCTGAACTTGGA +
Preference number: 5 (lower is better)
Translates to: AEAGGLLEAGSSTTA*PTVRVPRSSSPELG
Trigger: TCCAAGTTCAGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAGGCTGTTGTTGAACTCCCAGCTTCAAGCAAGCCTCCCGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS-3UTR CAA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAATCGGGAACTGTCGTaGGACAGAAGGACCGATGGG +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATNRELS*DRRTDG
Trigger: CCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCCCTTGACAGCGACCTaGTTCTCTGCAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATPLTAT*FSAAAN
Trigger: GTTTGCTGCTGCAGAGAACAAGGTCGCTGTCAAGGG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTTCGGAGGGCCCACTATaGCCACACGTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSSEGPL*PHVFLW
Trigger: CCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGA...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCAGCACAAAGGGGGTTaGCGGGAACACACCAAACCA +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATQHKGG*REHTKP
Trigger: TGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGCAGCACAAAGGGGGTTaGCGGGAACACACCAAACCA +
Preference number: 5 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKQHKGG*REHTKP
Trigger: TGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTG...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS GCA 90 bp CTGAGAATGCATGGAGGCATCAAGAGAGAGGCCCTCGGCTCGGGCTaGTGTTTCCAAGGCATCTTGGCATTCCAACGGTCGAGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LRMHGGIKREALGSG*CFQGILAFQRSSSP
Trigger: AGGAGAACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACAGCAGCCCGAGCCGAGGGCCTCTCTCTTGATGCCTCCATGCATTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000437205.5
ENST00000437341.5
ENST00000443376.5
CDS GCA 90 bp GATGGCAACAACGGGTCCTCCAGCCAGCAGGCTGCCAACGGCTGCTaGCTCAAACATTCTCTGCCCATCGTTGGAGCAAATGTTGATGAG +
Preference number: 5 (lower is better)
Translates to: DGNNGSSSQQAANGC*LKHSLPIVGANVDE
Trigger: CTCATCAACATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAGGACCCGTTGTTGCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS GCA 90 bp AAATCATGCCTAAGATGGCAACAACGGGTCCTCCAGCCAGCAGGCTaGCAACGGCTGCTGCCTCAAACATTCTCTGCCCATCGTTGGAGC +
Preference number: 5 (lower is better)
Translates to: KSCLRWQQRVLQPAG*QRLLPQTFSAHRWS
Trigger: GCTCCAACGATGGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAGGACCCGTTGTTGCCATCTTAGGCATGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS GCA 90 bp CGGAAAGGATGGTTAGAACTTACTGGTCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACGATGGACAGGATGAGCCTGGTGCGG +
Preference number: 5 (lower is better)
Translates to: RKGWLELTGPLKPAS*VIIRHTMDRMSLVR
Trigger: CCGCACCAGGCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCATCCTTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS CCA 90 bp CTGGCAATCACCACCACAATGGGAGCCACACCCACAGTGATGCTCTaGAAGTACCCAGCTTTTTCCAATATCCGACGCTCCTCCTCGCGG +
Preference number: 5 (lower is better)
Translates to: LAITTTMGATPTVML*KYPAFSNIRRSSSR
Trigger: CCGCGAGGAGGAGCGTCGGATATTGGAAAAAGCTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTCCCATTGTGGTGGTGATTGCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS-3UTR CAA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCAGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: KMAGATGALSCEELPLLGESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACATTCTCTGCCCATCGTaGGAGCAAATGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDILCPS*EQMLMS
Trigger: GCTCATCAACATTTGCTCCAACGATGGGCAGAGAAT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACCTATTGAAGATGTGGTaGCCCACATGGGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDLLKMW*PTWASK
Trigger: CTTAGATGCCCATGTGGGCAACCACATCTTCAATAG...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTCATTTTGGGGGTCAGCTTGGGCGAGTTCTGGATACTGGAGTGGGAGGAGTCCGGGAGGAGTCAGCCCTaGACAGCGACCTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FILGVSLGEFWILEWEESGRSQP*TATLFS
Trigger: AGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCCC...GGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTGGAACCAACAGGTCTaGGAGCTGGAGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENWNQQV*ELESSV
Trigger: CACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTCTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSLKKQQ*APGLGT
Trigger: GGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAG...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGTGACTGCGTGATATaGTCCAGACGCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSGDCVI*SRRFSS
Trigger: GGAGCTGAAGCGTCTGGACAATATCACGCAGTCACC...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS TCA 90 bp AACAACAGCCTGGCCAACAGTGAGAGTGCCTCGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGTCTCTGTGCGTCCCAGAAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: NNSLANSESASVEFS*TWNLHGLCASQKCW
Trigger: CCAGCACTTCTGGGACGCACAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAGGCTGTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS GCA 90 bp GGTAGCAGAGTTGTGGGTGCTGCTCCTCTTTCGTACTTGGCTGTGTaGCCCAGTGTTCTGATCCTGTCCGCCCCACAATGCCAATCTTCT +
Preference number: 5 (lower is better)
Translates to: GSRVVGAAPLSYLAV*PSVLILSAPQCQSS
Trigger: AGAAGATTGGCATTGTGGGGCGGACAGGATCAGAACACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CAA 90 bp CACCTCGGCACTGATGGAGCAGTCTCCAAAGGAAGGCTGAACTCTTGGCGAGAGTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: HLGTDGAVSKGRLNSWRESEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...CTCTCGCCAAGAGTTCAGCCTTCCTTTGGAGACTGCTCCATCAGTGCCGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTCGTTGGAGCAAATGTaGATGAGCTCACCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: APQHKGGLREHTKPHSNQSLEQM*MSSPRD
Trigger: ATCCCTGGGTGAGCTCATCAACATTTGCTCCAACGA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCTCGTTGGAGCAAATGTaGATGAGCTCACCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATSLEQM*MSSPRD
Trigger: ATCCCTGGGTGAGCTCATCAACATTTGCTCCAACGA...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTTCGGAAAAGCTCGTCATGCAGCCGGGAGGAAGCTCGCAGCGTGCCCTTGACAAACCAGTTTACCCTCTaGGATCTCCAGATCGATGCT +
Preference number: 5 (lower is better)
Translates to: LRKSSSCSREEARSVPLTNQFTL*DLQIDA
Trigger: AGCATCGATCTGGAGATCCAAGAGGGTAAACTGGTT...TGTCAAGGGCACGCTGCGAGCTTCCTCCCGGCTGCATGACGAGCTTTTCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAATCTCTCAGAGTAGCATaGAGGATCCAGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: THEILSPATELWRCGNRQSLRVA*RIQACW
Trigger: CCAGCAGGCCTGGATCCTCAATGCTACTCTGAGAGA...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTTCCCAAACAGGATGTaGTCTCTCAGAGTAGCATTG +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDFPNRM*SLRVAL
Trigger: CAATGCTACTCTGAGAGACAACATCCTGTTTGGGAA...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACTCTCTGTGGTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: ELCAVASHRNLRQWDSLWFRIAL*KMWLPT
Trigger: TGTGGGCAACCACATCTTCAATAGTGCTATCCGGAA...CCACAGAGAGTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACAGAACTGTCTTGGACTaGAGATGTTTCCGGATAGCA +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDRTVLD*RCFRIA
Trigger: TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGTCAGGGGAGGGAGCCTaGTTCTTAATTCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VADFEGRERERLCDDCGESGEGA*FLILAG
Trigger: ACCTGCCAGAATTAAGAACAAGGCTCCCTCCCCTGA...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTTGGAACCAACAGGTCTaGGAGCTGGAGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AALLTETVSDTRTEGRSPWNQQV*ELESSV
Trigger: CACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCA...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTCAGCACAAAGGGGGTTaGCGGGAACACACCAAACCA +
Preference number: 5 (lower is better)
Translates to: AALLTETVSDTRTEGRSPQHKGG*REHTKP
Trigger: TGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTG...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS TCA 90 bp TCACCACGCTGGCAATCACCACCACAATGGGAGCCACACCCACAGTaGTGCTCTGGAAGTACCCAGCTTTTTCCAATATCCGACGCTCCT +
Preference number: 5 (lower is better)
Translates to: SPRWQSPPQWEPHPQ*CSGSTQLFPISDAP
Trigger: AGGAGCGTCGGATATTGGAAAAAGCTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTCCCATTGTGGTGGTGATTGCCAGCGTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS TCA 90 bp GAGGCTTGCTTGAAGCTGGGAGTTCAACAACAGCCTGGCCAACAGTaGGAGTGCCTCGGTCGAGTTCTCCTGAACTTGGAATCTTCACGG +
Preference number: 5 (lower is better)
Translates to: EACLKLGVQQQPGQQ*ECLGRVLLNLESSR
Trigger: CCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAGGCTGTTGTTGAACTCCCAGCTTCAAGCAAGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS CCA 90 bp CCATCCCCAGCGAGGACTTCCCAAAATGTTACCAGTGCTTCTCTCTaGGTAGCAGAGTTGTGGGTGCTGCTCCTCTTTCGTACTTGGCTG +
Preference number: 5 (lower is better)
Translates to: PSPARTSQNVTSASL*VAELWVLLLFRTWL
Trigger: CAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATTTTGGGAAGTCCTCGCTGGGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CAA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATATGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: AWNQQVLELESSVQWPAICFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LISKSCLKLQTLRGERERESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAGTTATACAGGACTAGCCATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ELYRTSHLTGHLVSDGCLESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...TAAACAACCGTCGGAGACCAGATGACCTGTTAGATGGCTAGTCCTGTATAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TTCACCAAGAGAGAGCACTGCAGGAGGCGGCCTTCTCTTGCAGATCTACAGTGCTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: FTKREHCRRRPSLADLQCSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...GCACTGTAGATCTGCAAGAGAAGGCCGCCTCCTGCAGTGCTCTCTCTTGGTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp CACCACGGTCTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: HHGLEVATLNSKTQTLSGSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...CCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAGACCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGAACCAGTTTACCCTCTaGGATCTCCAGATCGATGCT +
Preference number: 5 (lower is better)
Translates to: APQHKGGLREHTKPHSNQNQFTL*DLQIDA
Trigger: AGCATCGATCTGGAGATCCAAGAGGGTAAACTGGTT...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAGTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: APQHKGGLREHTKPHSNQFRIAL*KMWLPT
Trigger: TGTGGGCAACCACATCTTCAATAGTGCTATCCGGAA...CTGGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGGGTGTTCCCGCTTCCTaGCTTGATCCAGTAACTCAA +
Preference number: 5 (lower is better)
Translates to: VADFEGRERERLCDDCGEGVPAS*LDPVTQ
Trigger: TTGAGTTACTGGATCAAGCAAGGAAGCGGGAACACC...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCTCACTCCATCAATCTaGATGCAGCCTCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: AAVGSRAWNQQVLELESSLTPSI*MQPPDN
Trigger: GTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAGGAATGATAGAGAGTTaGCTTCGGAGGTCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: THEILSPATELWRCGNRQGMIES*LRRSAR
Trigger: CCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCC...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAGGGAGGAGTCAGCCCTaGACAGCGACCTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: LTETVSDTRTEGRSPENSGRSQP*TATLFS
Trigger: AGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCCC...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACCAGGTGCTGAAGGCGGTGCTGCCTACATTCAGCATGAAAAGGGCCATAATATCGGAGGGCCCACTATaGCCACACGTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: HQVLKAVLPTFSMKRAIISEGPL*PHVFLW
Trigger: CCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGA...TATTATGGCCCTTTTCATGCTGAATGTAGGCAGCACCGCCTTCAGCACCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp CAAGGAACCACGGGAAGACTCCTGCGATCATTCCCACACAGAAGAACACCAGGATGGAACCAACAGGTCTaGGAGCTGGAGAGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QGTTGRLLRSFPHRRTPGWNQQV*ELESSV
Trigger: CACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCA...TCCTGGTGTTCTTCTGTGTGGGAATGATCGCAGGAGTCTTCCCGTGGTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGACTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRLKKQQ*APGLGT
Trigger: GGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAG...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATKSCLK*QTLRGE
Trigger: CTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTT...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTACGCTGACCATTCAATaGATGACAGCAGTGACCACG +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSTLTIQ*MTAVTT
Trigger: CGTGGTCACTGCTGTCATCAATTGAATGGTCAGCGT...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS TCA 90 bp ACTGTGAAAGCCTGTGCTGCTGTCAGATCGAAGCCCAGGGTCATATaGACAGAGAAGGTCACCACGCTGGCAATCACCACCACAATGGGA +
Preference number: 5 (lower is better)
Translates to: TVKACAAVRSKPRVI*TEKVTTLAITTTMG
Trigger: TCCCATTGTGGTGGTGATTGCCAGCGTGGTGACCTTCTCTGTTCATATGACCCTGGGCTTCGATCTGACAGCAGCACAGGCTTTCACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS-3UTR CAA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: KMAGATGALSCEELPLLGTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTGAGAGCTCCCCCTTCTaGTGGGCCACACGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: CIQPGCWFTSKKIGFFSSESSPF*WATRAR
Trigger: TCTGGCCCGTGTGGCCCACAAGAAGGGGGAGCTCTC...ACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCATCTCTCAGAGTAGCATaGAGGATCCAGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSLRVA*RIQACW
Trigger: CCAGCAGGCCTGGATCCTCAATGCTACTCTGAGAGA...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATACTATTGAAGATGTGGTaGCCCACATGGGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: AWNQQVLELESSVQWPAILLKMW*PTWASK
Trigger: CTTAGATGCCCATGTGGGCAACCACATCTTCAATAG...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTACAAACAGAACTGTCTaGGACTTGAGATGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: AAVGSRAWNQQVLELESSTNRTV*DLRCFR
Trigger: CCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGT...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTCCTGTTTTAGGACCCTaGTCTTGTGACTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: AAVGSRAWNQQVLELESSPVLGP*SCDFFC
Trigger: ACAGAAGAAGTCACAAGACAAGGGTCCTAAAACAGG...AGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGGGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAACCTGTTTTAGGACCCTaGTCTTGTGACTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: GAVGGPTIATRLPLDTQKPVLGP*SCDFFC
Trigger: ACAGAAGAAGTCACAAGACAAGGGTCCTAAAACAGG...TTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAGGAACCTGAGGCAGTGGGACACTTCATCCATGTCTTaGGAAAACCTGTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: GAGELCAVASHRNLRQWDTSSMS*ENLLRI
Trigger: GATTCTCAACAGGTTTTCCAAAGACATGGATGAAGT...GTCCCACTGCCTCAGGTTCCTATGGCTGGCCACTGCACAGAGCTCTCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCCCCTTGACAGCGACCTaGTTCTCTGCAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: TIATRLPLDTQKTWHRETPLTAT*FSAAAN
Trigger: GTTTGCTGCTGCAGAGAACAAGGTCGCTGTCAAGGG...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTGAGAACTCAAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LTETVSDTRTEGRSPENSSWLQG*EPTGLG
Trigger: TCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACT...TGAGTTCTCAGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCAGTTGGCTCCAGGGCTaGGAACCAACAGGTCTTGGA +
Preference number: 5 (lower is better)
Translates to: TIATRLPLDTQKTWHRETSWLQG*EPTGLG
Trigger: TCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACT...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATLKLQT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAA...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAGGGGGTCGTCCAGGATGTAGATGCTCCTGTCACTATACAAGGCCCGGGCAAGTTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: EGVVQDVDAPVTIQGPGKLKLQT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAA...CTTGCCCGGGCCTTGTATAGTGACAGGAGCATCTACATCCTGGACGACCCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTGGCCAGCCATAAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AWNQQVLELESSVQWPAIKSCLK*QTLRGE
Trigger: CTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTT...TATGGCTGGCCACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ACCCACGAAATCCTGAGCCCTGCCACTGAACTGTGGAGGTGTGGGAATAGGCAAACGCTGACCATTCAATaGATGACAGCAGTGACCACG +
Preference number: 5 (lower is better)
Translates to: THEILSPATELWRCGNRQTLTIQ*MTAVTT
Trigger: CGTGGTCACTGCTGTCATCAATTGAATGGTCAGCGT...TTGCCTATTCCCACACCTCCACAGTTCAGTGGCAGGGCTCAGGATTTCGTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCGCTCCTCTTTCGTACTaGGCTGTGTGCCCCAGTGTT +
Preference number: 5 (lower is better)
Translates to: RLLRNDREFASEVGKANIAPLSY*AVCPSV
Trigger: AACACTGGGGCACACAGCCAAGTACGAAAGAGGAGC...GATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CAA 90 bp AGGATGGCCTCAGGCCAGGAGTTTGAGACTAGTCTGTGTAACCCTCCAAAACCCCCTCAGGCCAGGAGTTaGAGACTAGTCTGTGTAACC +
Preference number: 5 (lower is better)
Translates to: RMASGQEFETSLCNPPKPPQARS*RLVCVT
Trigger: GGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGG...GGGTTTTGGAGGGTTACACAGACTAGTCTCAAACTCCTGGCCTGAGGCCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS CCA 90 bp ACTTCCCAAAATGTTACCAGTGCTTCTCTCTGGGTAGCAGAGTTGTaGGTGCTGCTCCTCTTTCGTACTTGGCTGTGTGCCCCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: TSQNVTSASLWVAEL*VLLLFRTWLCAPVF
Trigger: GAACACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATTTTGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS-3UTR CAA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTCATTTTGGGGGTCAGCTTGGGCGAGTTCTGGATACTGGAGTGGGAGGAGTCCATTCTCTGCCCATCGTaGGAGCAAATGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: FILGVSLGEFWILEWEESILCPS*EQMLMS
Trigger: GCTCATCAACATTTGCTCCAACGATGGGCAGAGAAT...GGACTCCTCCCACTCCAGTATCCAGAACTCGCCCAAGCTGACCCCCAAAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp GGCTGTCGGAGGGCCCACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACTTCCCAAACAGGATGTaGTCTCTCAGAGTAGCATTG +
Preference number: 5 (lower is better)
Translates to: GCRRAHYCHTSSFGHPENFPNRM*SLRVAL
Trigger: CAATGCTACTCTGAGAGACAACATCCTGTTTGGGAA...GTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGAGCTCTGTGCAGTACAAACAGAACTGTCTaGGACTTGAGATGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LAPGLGTNRSWSWRALCSTNRTV*DLRCFR
Trigger: CCGGAAACATCTCAAGTCCAAGACAGTTCTGTTTGT...ACTGCACAGAGCTCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AACTTCATCCATGTCTTTGGAAAACCTGTTGAGAATCCTCCCTGTGGGGGTCGTGCTCGCAGCGTGCCCTaGACAAAGACAACTCCTCGA +
Preference number: 5 (lower is better)
Translates to: NFIHVFGKPVENPPCGGRARSVP*TKTTPR
Trigger: TCGAGGAGTTGTCTTTGTCAAGGGCACGCTGCGAGC...ACGACCCCCACAGGGAGGATTCTCAACAGGTTTTCCAAAGACATGGATGAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCGGAATGATAGAGAGTTaGCTTCGGAGGTCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: TIATRLPLDTQKTWHRETGMIES*LRRSAR
Trigger: CCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCC...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TGGACAGAAGGACCGATGGGGTGTCAAACTCCACCACCTGTCCCTGGGCCAGCACACATTTTCAGATTTTaGCTTCCACAAGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: WTEGPMGCQTPPPVPGPAHIFRF*LPQGVQ
Trigger: CTGAACACCTTGTGGAAGCAAAAATCTGAAAATGTG...TGCTGGCCCAGGGACAGGTGGTGGAGTTTGACACCCCATCGGTCCTTCTGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS GCA 90 bp ACGATTTCCGTCAGGAGGAGGCCCAGCACTAACAACAAGCTGTACTaGAGGTTAGACTCTGTTGCCTGGGTATACTCCAAGAGGTGTTTC +
Preference number: 5 (lower is better)
Translates to: TISVRRRPSTNNKLY*RLDSVAWVYSKRCF
Trigger: GAAACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTTAGTGCTGGGCCTCCTCCTGACGGAAATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS CCA 90 bp CCCAGCACTAACAACAAGCTGTACTGCAGGTTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGTTTCACCATGAAGGCTGGTCCACTG +
Preference number: 5 (lower is better)
Translates to: PSTNNKLYCRLDSVA*VYSKRCFTMKAGPL
Trigger: CAGTGGACCAGCCTTCATGGTGAAACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTTAGTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTAACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: GTLLKMAGATGALSCEELTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...TAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TCTGGATACTGGAGTGGGAGGAGTCCCATGCCAAGGTGGCATTTTTCATCTCTATCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: SGYWSGRSPMPRWHFSSLSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...TAGAGATGAAAAATGCCACCTTGGCATGGGACTCCTCCCACTCCAGTATCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGAACCAGTTTACCCTCTaGGATCTCCAGATCGATGCT +
Preference number: 5 (lower is better)
Translates to: PARRNVSVIPILDGGSEKNQFTL*DLQIDA
Trigger: AGCATCGATCTGGAGATCCAAGAGGGTAAACTGGTT...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGTTCCGGATAGCACTATaGAAGATGTGGTTGCCCACA +
Preference number: 5 (lower is better)
Translates to: PARRNVSVIPILDGGSEKFRIAL*KMWLPT
Trigger: TGTGGGCAACCACATCTTCAATAGTGCTATCCGGAA...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGGAACAGCACCGGCTCTaGAGGAATGATAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: PARRNVSVIPILDGGSEKEQHRL*RNDREF
Trigger: AAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTC...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCACTGATTCTCACTCCAAATCGGGAACTGTCGTaGGACAGAAGGACCGATGGG +
Preference number: 5 (lower is better)
Translates to: IESLLRRSARPISLILTPNRELS*DRRTDG
Trigger: CCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT...TGGAGTGAGAATCAGTGATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCGGGAGGAGTCAGCCCTaGACAGCGACCTTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRGRSQP*TATLFS
Trigger: AGAGAACAAGGTCGCTGTCAAGGGCTGACTCCTCCC...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCGGCTCGGAGGAATGTCTCTGTGATCCCCATTCTTGATGGAGGGAGTGAAAAGAAGAGCTGCTTAAAGTaGCAGACTTTGAGGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PARRNVSVIPILDGGSEKKSCLK*QTLRGE
Trigger: CTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTT...CTTTTCACTCCCTCCATCAAGAATGGGGATCACAGAGACATTCCTCCGAGCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CAGCCCCACAGCACAAAGGGGGTTTGCGGGAACACACCAAACCACACAGCAACCCACATTTTCAGATTTTaGCTTCCACAAGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: QPHSTKGVCGNTPNHTATHIFRF*LPQGVQ
Trigger: CTGAACACCTTGTGGAAGCAAAAATCTGAAAATGTG...GGTTGCTGTGTGGTTTGGTGTGTTCCCGCAAACCCCCTTTGTGCTGTGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCATCATCCTTCCAGCTGTaGCCAAAATCCATCGACCCC +
Preference number: 5 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSSSFQL*PKSIDP
Trigger: GGGGTCGATGGATTTTGGCAACAGCTGGAAGGATGA...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp CTGGAGGTAGCTACGCTGAATTCCAAAACCCAGACTCTCTCTGGGTTAATTTCTCAGCAGGTGGTTGCCTaGGGCTCCTTCCTTCCCATA +
Preference number: 5 (lower is better)
Translates to: LEVATLNSKTQTLSGLISQQVVA*GSFLPI
Trigger: TATGGGAAGGAAGGAGCCCAAGGCAACCACCTGCTG...AGAAATTAACCCAGAGAGAGTCTGGGTTTTGGAATTCAGCGTAGCTACCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS TCA 90 bp CTGAACTCTTGGCGAGAGATTCTGCCCAGCTTGACTCTCTCATTCTaGCCGCAGAATACAGCCATCCTGAAAATTTGGTCCACTGAAGCC +
Preference number: 5 (lower is better)
Translates to: LNSWREILPSLTLSF*PQNTAILKIWSTEA
Trigger: GGCTTCAGTGGACCAAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAGCTGGGCAGAATCTCTCGCCAAGAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382494.6
CDS-3UTR CAA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCACGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSRVLLN*ESSRSL
Trigger: CAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCG...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCTGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: RCPLGPRRSPPIRFLPSPCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...GGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTCTGCTCGGGTGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: KMAGATGALSCEELPLLGCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...CCCGAGCAGAGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp ATCCACCCTTCTACCCAGGTGCCTTATAGCAAAGGTGACTGCAGCTGTAAGTCATGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: IHPSTQVPYSKGDCSCKSCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...TGACTTACAGCTGCAGTCACCTTTGCTATAAGGCACCTGGGTAGAAGGGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GACGTGATGTGGGAGAGGAAAGGTGACTGCGTGATATTGTCCAGACGCTTCAGCGCAAAAGTCATGGAATaGAAGACTGTCACCACTGTG +
Preference number: 5 (lower is better)
Translates to: DVMWERKGDCVILSRRFSAKVME*KTVTTV
Trigger: CACAGTGGTGACAGTCTTCAATTCCATGACTTTTGC...GCTGAAGCGTCTGGACAATATCACGCAGTCACCTTTCCTCTCCCACATCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp GTTGCAGACTTTGAGGGGAGAGAGAGAGAGAGACTGTGCGACGACTGCGGTGAGACTTCATCCATGTCTTaGGAAAACCTGTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: VADFEGRERERLCDDCGETSSMS*ENLLRI
Trigger: GATTCTCAACAGGTTTTCCAAAGACATGGATGAAGT...CTCACCGCAGTCGTCGCACAGTCTCTCTCTCTCTCTCCCCTCAAAGTCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTCAGGGGAGGGAGCCTaGTTCTTAATTCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARSGEGA*FLILAG
Trigger: ACCTGCCAGAATTAAGAACAAGGCTCCCTCCCCTGA...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CGGCTCTTGAGGAATGATAGAGAGTTTGCTTCGGAGGTCGGCAAGGCCAATATCCTCACTCCATCAATCTaGATGCAGCCTCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: RLLRNDREFASEVGKANILTPSI*MQPPDN
Trigger: GTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAG...GATATTGGCCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCCTCAAGAGCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR CAA 90 bp TCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATTTGGAATGATAGAGAGTTaGCTTCGGAGGTCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: SRASQIWSSVYWLKGSKFGMIES*LRRSAR
Trigger: CCTTGCCGACCTCCGAAGCAAACTCTCTATCATTCC...AAATTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR CAA 90 bp GCTGCTCTCCTGACAGAAACAGTAAGTGACACCAGGACAGAAGGCAGGAGCCCTTCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGAT +
Preference number: 5 (lower is better)
Translates to: AALLTETVSDTRTEGRSPSSVYW*KGSKFD
Trigger: ATCAAATTTGGACCCCTTCAACCAGTACACTGAAGA...AGGGCTCCTGCCTTCTGTCCTGGTGTCACTTACTGTTTCTGTCAGGAGAGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTAATCGGGAACTGTCGTaGGACAGAAGGACCGATGGG +
Preference number: 5 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVNRELS*DRRTDG
Trigger: CCCATCGGTCCTTCTGTCCAACGACAGTTCCCGATT...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AAAAAGCAGCAGTTGGCTCCAGGGCTTGGAACCAACAGGTCTTGGAGCTGGAGATTAAAGTTGCAGACTTaGAGGGGAGAGAGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: KKQQLAPGLGTNRSWSWRLKLQT*RGERER
Trigger: TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAA...TCTCCAGCTCCAAGACCTGTTGGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGGTGACTGCGTGATATaGTCCAGACGCTTCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLGDCVI*SRRFSS
Trigger: GGAGCTGAAGCGTCTGGACAATATCACGCAGTCACC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTAGGAAGGCTGAACTCTaGGCGAGAGATTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: TLLKMAGATGALSCEELPRKAEL*ARDSAQ
Trigger: CTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCCT...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGCGGAGGCGGCCTTCTCTaGCAGATCTACAGTGCGATG +
Preference number: 5 (lower is better)
Translates to: STIFKEHLTNTVQQVKHCGGGLL*QIYSAM
Trigger: CATCGCACTGTAGATCTGCAAGAGAAGGCCGCCTCC...GCAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS CCA 90 bp CCCAGCACTAACAACAAGCTGTACTGCAGGTTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGTTTCACCATGAAGGCAGTTGTACTG +
Preference number: 5 (lower is better)
Translates to: PSTNNKLYCRLDSVA*VYSKRCFTMKAVVL
Trigger: CAGTACAACTGCCTTCATGGTGAAACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTTAGTGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492216.1
CDS-3UTR CAA 90 bp CACAGCAACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: HSNQQPEVGLFTVQKLLRSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...GCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTTGCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AGAGATGGCGAGACCCGCATAGGCTGGGGGAATCTGCCCGTGCATAAGAACGATCTGTTCAGCACAGAGTaGTATCTTTCTTCATCATAT +
Preference number: 5 (lower is better)
Translates to: RDGETRIGWGNLPVHKNDLFSTE*YLSSSY
Trigger: ATATGATGAAGAAAGATACAACTCTGTGCTGAACAG...ATCGTTCTTATGCACGGGCAGATTCCCCCAGCCTATGCGGGTCTCGCCATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp ACTATTGCCACACGTCTTCCTTTGGACACCCAGAAAACCTGGCACCGTGAAACCAGAACTGTCTTGGACTaGAGATGTTTCCGGATAGCA +
Preference number: 5 (lower is better)
Translates to: TIATRLPLDTQKTWHRETRTVLD*RCFRIA
Trigger: TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCT...GGTTTCACGGTGCCAGGTTTTCTGGGTGTCCAAAGGAAGACGTGTGGCAATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGTCGGAGGGCCCACTATaGCCACACGTCTTCCTTTGG +
Preference number: 5 (lower is better)
Translates to: GLFTVQKLLRQCETLISKSEGPL*PHVFLW
Trigger: CCAAAGGAAGACGTGTGGCAATAGTGGGCCCTCCGA...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCTCAAAAAGCAGCAGTaGGCTCCAGGGCTTGGAACC +
Preference number: 5 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCLKKQQ*APGLGT
Trigger: GGTTCCAAGCCCTGGAGCCAACTGCTGCTTTTTGAG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AGCACTCAATCAGTGAGGGCTCCTGAGGTTGCAATGATTCTGCAACGGAGTAGATTTCTCAGGGCTTATTaGCCACAGACCTGCCAAACA +
Preference number: 5 (lower is better)
Translates to: STQSVRAPEVAMILQRSRFLRAY*PQTCQT
Trigger: TGTTTGGCAGGTCTGTGGCAAATAAGCCCTGAGAAA...TCTACTCCGTTGCAGAATCATTGCAACCTCAGGAGCCCTCACTGATTGAGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp ACTCTGCTCAAAATGGCTGGTGCTACTGGTGCACTAAGTTGTGAGGAATTACCTACCTTACCTGAACTCTaGGCGAGAGATTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: TLLKMAGATGALSCEELPTLPEL*ARDSAQ
Trigger: CTGGGCAGAATCTCTCGCCAAGAGTTCAGGTAAGGT...AGGTAATTCCTCACAACTTAGTGCACCAGTAGCACCAGCCATTTTGAGCAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS TCA 90 bp TGTTGGCAGCGCTGCAGTGTAGGGTGTCTGCTCATCTCTTATCTCTaGCATTTTCAATACACGGGCATACCTGTGGCACTCAATAGATAC +
Preference number: 5 (lower is better)
Translates to: CWQRCSVGCLLISYL*HFQYTGIPVALNRY
Trigger: GTATCTATTGAGTGCCACAGGTATGCCCGTGTATTGAAAATGTCAGAGATAAGAGATGAGCAGACACCCTACACTGCAGCGCTGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476402.1
CDS-3UTR CAA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGCGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLRVLLN*ESSRSL
Trigger: CAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCG...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCTCAAGGAAAAACTGGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTACGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: PQGKTGGILLGLFKSLHLRVLLN*ESSRSL
Trigger: CAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCG...TAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACCAGTTTTTCCTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp ATTGAAACATACAGAGTCGAGTTATACAGGACTAGCCATCTAACAGGTCATCTGACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: IETYRVELYRTSHLTGHLTGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...CAGATGACCTGTTAGATGGCTAGTCCTGTATAACTCGACTCTGTATGTTTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATAACTGGGTGCTGGTGTTaGGAAGTAGTCCGGATGGGC +
Preference number: 5 (lower is better)
Translates to: FQELLYSTSPLPQIFRFITGCWC*EVVRMG
Trigger: GCCCATCCGGACTACTTCCAAACACCAGCACCCAGT...TATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp CCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTGGGTCACCACTGTATACTCAGAAGACTCGTGCTaGGACAGAGACCACACGTCT +
Preference number: 5 (lower is better)
Translates to: PLPQIFRFISIAWVTTVYSEDSC*DRDHTS
Trigger: AGACGTGTGGTCTCTGTCCAAGCACGAGTCTTCTGA...GTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCTCTCAGAGTAGCATaGAGGATCCAGGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESLRVA*RIQACW
Trigger: CCAGCAGGCCTGGATCCTCAATGCTACTCTGAGAGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGGTGTTCCCGCTTCCTaGCTTGATCCAGTAACTCAA +
Preference number: 5 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGGVPAS*LDPVTQ
Trigger: TTGAGTTACTGGATCAAGCAAGGAAGCGGGAACACC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTCTCCAGGGCATCCCAAATCTGGTCTTCAGTGTACTGGTTGAAGGGGTCCAAATCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGAT +
Preference number: 5 (lower is better)
Translates to: LSRASQIWSSVYWLKGSKSSVYW*KGSKFD
Trigger: ATCAAATTTGGACCCCTTCAACCAGTACACTGAAGA...TTTGGACCCCTTCAACCAGTACACTGAAGACCAGATTTGGGATGCCCTGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437205.5
ENST00000443497.1
CDS-3UTR CAA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGCCCTTGACAGCGACCTaGTTCTCTGCAGCAGCAAAC +
Preference number: 5 (lower is better)
Translates to: KSETHKPIRNCCAKDKIEPLTAT*FSAAAN
Trigger: GTTTGCTGCTGCAGAGAACAAGGTCGCTGTCAAGGG...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTATGCAATCCAAAATGTACTGCCTCCAGGCACTaGGTATGTTCCCGGTGCTGG +
Preference number: 5 (lower is better)
Translates to: AGLLARRLASFPVCNPKCTASRH*VCSRCW
Trigger: CCAGCACCGGGAACATACCAAGTGCCTGGAGGCAGT...ACATTTTGGATTGCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTTGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGCTCCTCGCGGATTTTTaGAACACTCTGAGAAAATGC +
Preference number: 5 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARLLADF*NTLRKC
Trigger: GCATTTTCTCAGAGTGTTCAAAAAATCCGCGAGGAG...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCAGGGGAGGGAGCCTaGTTCTTAATTCTGGCAGGT +
Preference number: 5 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESGEGA*FLILAG
Trigger: ACCTGCCAGAATTAAGAACAAGGCTCCCTCCCCTGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCGAACAGCACCGGCTCTaGAGGAATGATAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: ETHKPIRNCCAKDKIEKGEQHRL*RNDREF
Trigger: AAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTC...GCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GCTTGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 5 (lower is better)
Translates to: AWVTTVYSRVAGLLARRLVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...CAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATAGGAAGGCTGAACTCTaGGCGAGAGATTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: KSTIFKEHLTNTVQQVKHRKAEL*ARDSAQ
Trigger: CTGGGCAGAATCTCTCGCCAAGAGTTCAGCCTTCCT...ATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000382494.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGCGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GLFTVQKLLRQCETLISKRVLLN*ESSRSL
Trigger: CAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCG...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTGGCATCCTTCTGGGTCTTTTCAAGTCCTTGCATCTAAAAATCAATCTTGACCGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: GGILLGLFKSLHLKINLDRVLLN*ESSRSL
Trigger: CAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCG...GTCAAGATTGATTTTTAGATGCAAGGACTTGAAAAGACCCAGAAGGATGCCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGAAGCATTGTGTTTCCAAGGCATCTaGGCATTCCAACGGTCGAGT +
Preference number: 5 (lower is better)
Translates to: KYHLQRASHKHCTAGEALCFQGI*AFQRSS
Trigger: ACTCGACCGTTGGAATGCCAAGATGCCTTGGAAACA...CAATGCTTCACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAAAGTGAAACACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGTCGTTGGAGCAAATGTaGATGAGCTCACCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: KSETHKPIRNCCAKDKIESLEQM*MSSPRD
Trigger: ATCCCTGGGTGAGCTCATCAACATTTGCTCCAACGA...CTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTGTTTCACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTATTCTCTGCCCATCGTaGGAGCAAATGTTGATGAGC +
Preference number: 5 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCILCPS*EQMLMS
Trigger: GCTCATCAACATTTGCTCCAACGATGGGCAGAGAAT...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGACTCCTCGCGGATTTTTaGAACACTCTGAGAAAATGC +
Preference number: 5 (lower is better)
Translates to: LISKSCLKLQTLRGERERLLADF*NTLRKC
Trigger: GCATTTTCTCAGAGTGTTCAAAAAATCCGCGAGGAG...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGGCAAAAGTCATGGAATaGAAGACTGTCACCACTGTG +
Preference number: 5 (lower is better)
Translates to: PEVGLFTVQKLLRQCETLAKVME*KTVTTV
Trigger: CACAGTGGTGACAGTCTTCAATTCCATGACTTTTGC...CAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGATTCCCAAACAGGATGTaGTCTCTCAGAGTAGCATTG +
Preference number: 5 (lower is better)
Translates to: LISKSCLKLQTLRGERERFPNRM*SLRVAL
Trigger: CAATGCTACTCTGAGAGACAACATCCTGTTTGGGAA...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCTATTGAAGATGTGGTaGCCCACATGGGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCLLKMW*PTWASK
Trigger: CTTAGATGCCCATGTGGGCAACCACATCTTCAATAG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTCCTGTTTTAGGACCCTaGTCTTGTGACTTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVPVLGP*SCDFFC
Trigger: ACAGAAGAAGTCACAAGACAAGGGTCCTAAAACAGG...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GATCTCAACTGGCGGTGTCTCTCCCAGCAACAGGTTATTAAAAATGGTAGCATACTCACTCCATCAATCTaGATGCAGCCTCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: DLNWRCLSQQQVIKNGSILTPSI*MQPPDN
Trigger: GTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAG...TATGCTACCATTTTTAATAACCTGTTGCTGGGAGAGACACCGCCAGTTGAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437205.5
CDS-3UTR CAA 90 bp AGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGGTCTTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: SCKSELNDRQKWRPDTTVLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...GACCGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGTTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: CSCKSELNDRQKWRPDTTLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...CGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp TGGGTCACCACTGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 5 (lower is better)
Translates to: WVTTVYSRVAGLLARRLALGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...AGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACAGTGGTGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp CATCTAACAGGTCATCTGGTCTCCGACGGTTGTTTAACGACACACAGTAGAAATACGTCAAAGGCTCTCTaGTCTACTCTGCATCAGTAC +
Preference number: 5 (lower is better)
Translates to: HLTGHLVSDGCLTTHSRNTSKAL*STLHQY
Trigger: GTACTGATGCAGAGTAGACAAGAGAGCCTTTGACGT...ATTTCTACTGTGTGTCGTTAAACAACCGTCGGAGACCAGATGACCTGTTAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS TCA 90 bp AAGTGCTGGTTCTCTCCCTCACACTTCTATACCCAGGACTGGGGATaGTATACTCTTTTCCTATGTCGATATCCTTCATCTTCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: KCWFSPSHFYTQDWG*YTLFLCRYPSSSLS
Trigger: ACTCAGAGAAGATGAAGGATATCGACATAGGAAAAGAGTATATCATCCCCAGTCCTGGGTATAGAAGTGTGAGGGAGAGAACCAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000437205.5
ENST00000437341.5
ENST00000438979.6
ENST00000443376.5
ENST00000446941.2
CDS-3UTR CAA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGACTTCATCCATGTCTTaGGAAAACCTGTTGAGAATC +
Preference number: 5 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARTSSMS*ENLLRI
Trigger: GATTCTCAACAGGTTTTCCAAAGACATGGATGAAGT...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGCTCACTCCATCAATCTaGATGCAGCCTCCAGATAAC +
Preference number: 5 (lower is better)
Translates to: GLFTVQKLLRQCETLISKLTPSI*MQPPDN
Trigger: GTTATCTGGAGGCTGCATCAAGATTGATGGAGTGAG...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGGAACAGCACCGGCTCTaGAGGAATGATAGAGAGTTT +
Preference number: 5 (lower is better)
Translates to: GLFTVQKLLRQCETLISKEQHRL*RNDREF
Trigger: AAACTCTCTATCATTCCTCAAGAGCCGGTGCTGTTC...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGTTTCTTCAGTGTACTGGTaGAAGGGGTCCAAATTTGAT +
Preference number: 5 (lower is better)
Translates to: HKPIRNCCAKDKIEKGKVSSVYW*KGSKFD
Trigger: ATCAAATTTGGACCCCTTCAACCAGTACACTGAAGA...AACCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp AGATGTCCACTAGGTCCTAGGAGATCCCCACCAATCAGATTTTTGCCAAGTCCCAATGAAGTTCTTGCATaGGCCAAATGGAATCAAGAA +
Preference number: 5 (lower is better)
Translates to: RCPLGPRRSPPIRFLPSPNEVLA*AKWNQE
Trigger: TTCTTGATTCCATTTGGCCAATGCAAGAACTTCATT...GGGACTTGGCAAAAATCTGATTGGTGGGGATCTCCTAGGACCTAGTGGACATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp TGCAGCTGTAAGTCAGAGCTGAATGACAGACAAAAATGGAGGCCAGACACCACGAAACCTTGGATCATCTaGGTGTATAAATGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: CSCKSELNDRQKWRPDTTKPWII*VYKCQH
Trigger: ATGCTGACATTTATACACCAAGATGATCCAAGGTTT...CGTGGTGTCTGGCCTCCATTTTTGTCTGTCATTCAGCTCTGACTTACAGCTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS-3UTR CAA 90 bp CACACAAGCCAATCCGGAACTGCTGTGCGAAAGATAAAATCGAGAAAGGCAAGGCTGTTCAGCACAGAGTaGTATCTTTCTTCATCATAT +
Preference number: 5 (lower is better)
Translates to: HTSQSGTAVRKIKSRKARLFSTE*YLSSSY
Trigger: ATATGATGAAGAAAGATACAACTCTGTGCTGAACAG...CCTTGCCTTTCTCGATTTTATCTTTCGCACAGCAGTTCCGGATTGGCTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTGAGACACTGATTAGCAAGAGAACTGTCTTGGACTaGAGATGTTTCCGGATAGCA +
Preference number: 5 (lower is better)
Translates to: GLFTVQKLLRQCETLISKRTVLD*RCFRIA
Trigger: TGCTATCCGGAAACATCTCAAGTCCAAGACAGTTCT...CTTGCTAATCAGTGTCTCACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CTGATTAGCAAGAGCTGCTTAAAGTTGCAGACTTTGAGGGGAGAGAGAGAGAGACACATTTTCAGATTTTaGCTTCCACAAGGTGTTCAG +
Preference number: 5 (lower is better)
Translates to: LISKSCLKLQTLRGERERHIFRF*LPQGVQ
Trigger: CTGAACACCTTGTGGAAGCAAAAATCTGAAAATGTG...TCTCTCTCTCTCTCCCCTCAAAGTCTGCAACTTTAAGCAGCTCTTGCTAATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TGTATACAGCCGGGTTGCTGGTTTACTAGCAAGAAGATTGGCTTCTTTTCCAGTGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 5 (lower is better)
Translates to: CIQPGCWFTSKKIGFFSSVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...ACTGGAAAAGAAGCCAATCTTCTTGCTAGTAAACCAGCAACCCGGCTGTATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACACGCTGACCATTCAATaGATGACAGCAGTGACCACG +
Preference number: 5 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNTLTIQ*MTAVTT
Trigger: CGTGGTCACTGCTGTCATCAATTGAATGGTCAGCGT...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp CCCCTCCCTCAGATTTTTAGGTTTATATCCATTGCTTGGGTCACCACTGTATACTTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: PLPQIFRFISIAWVTTVYLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...GTATACAGTGGTGACCCAAGCAATGGATATAAACCTAAAAATCTGAGGGAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AACCAGCAACCTGAGGTAGGTCTCTTTACAGTACAAAAACTTCTACGCCAGTGTCTGTTCAGCACAGAGTaGTATCTTTCTTCATCATAT +
Preference number: 5 (lower is better)
Translates to: NQQPEVGLFTVQKLLRQCLFSTE*YLSSSY
Trigger: ATATGATGAAGAAAGATACAACTCTGTGCTGAACAG...ACACTGGCGTAGAAGTTTTTGTACTGTAAAGAGACCTACCTCAGGTTGCTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATTACTAGCAAGAAGATaGGCTTCTTTTCCAGTATGC +
Preference number: 5 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLLLARR*ASFPVC
Trigger: GCATACTGGAAAAGAAGCCAATCTTCTTGCTAGTAA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp GATTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 5 (lower is better)
Translates to: DSKNYCIPPLPSLRFLGLLGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...TAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AATAATCAAAATATGACTCTCCCTAAAAGTGAAACACACAAGCCAATCCGGAACCTCCTCGCGGATTTTTaGAACACTCTGAGAAAATGC +
Preference number: 5 (lower is better)
Translates to: NNQNMTLPKSETHKPIRNLLADF*NTLRKC
Trigger: GCATTTTCTCAGAGTGTTCAAAAAATCCGCGAGGAG...GTTCCGGATTGGCTTGTGTGTTTCACTTTTAGGGAGAGTCATATTTTGATTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS-3UTR CAA 90 bp TTCCAAGAACTACTGTATTCCACCTCTCCCCTCCCTCAGATTTTTAGGTTTATATTAGGTTTATATCCATaGCTTGGGTCACCACTGTAT +
Preference number: 5 (lower is better)
Translates to: FQELLYSTSPLPQIFRFILGLYP*LGSPLY
Trigger: ATACAGTGGTGACCCAAGCAATGGATATAAACCTAA...TATAAACCTAAAAATCTGAGGGAGGGGAGAGGTGGAATACAGTAGTTCTTGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS-3UTR CAA 90 bp AAATATAAAAGTACCATCTTCAAAGAGCATCTCACAAACACTGTACAGCAGGTGGTTTATATCCATTGCTaGGGTCACCACTGTATACAG +
Preference number: 5 (lower is better)
Translates to: KYKSTIFKEHLTNTVQQVVYIHC*GHHCIQ
Trigger: CTGTATACAGTGGTGACCCAAGCAATGGATATAAAC...CACCTGCTGTACAGTGTTTGTGAGATGCTCTTTGAAGATGGTACTTTTATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000443376.5
CDS CAA 72 bp GAATTCTTCGAAGGTCGCTGGCGGCTCCGCTGCGGGTaGAGCAGGGTGCCCCGAGCCACCCGCTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: EFFEGRWRLRCG*SRVPRATRCTA
Trigger: GGCTGTGCAGCGGGTGGCTCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS GCA 72 bp ACATCAGAATTCTTCGAAGGTCGCTGGCGGCTCCGCTaGGGGTTGAGCAGGGTGCCCCGAGCCACCCGCTGC +
Preference number: 6 (lower is better)
Translates to: TSEFFEGRWRLR*GLSRVPRATRC
Trigger: GCAGCGGGTGGCTCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTCTGATGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS CAA 90 bp TTCACATCAGAATTCTTCGAAGGTCGCTGGCGGCTCCGCTGCGGGTaGAGCAGGGTGCCCCGAGCCACCCGCTGCACAGCCTCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: FTSEFFEGRWRLRCG*SRVPRATRCTASQV
Trigger: CACCTGGGAGGCTGTGCAGCGGGTGGCTCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTCTGATGTGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS GCA 72 bp CGCCAGCCGCTCAACCACGCTCCCGAGCATGAGCCCTaGAGCAAAACAAGCCTTTATAGCGGCATCGGCCGC +
Preference number: 6 (lower is better)
Translates to: RQPLNHAPEHEP*SKTSLYSGIGR
Trigger: GCGGCCGATGCCGCTATAAAGGCTTGTTTTGCTGCAGGGCTCATGCTCGGGAGCGTGGTTGAGCGGCTGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265586.10
ENST00000446941.2
CDS CCA 72 bp GGCCGTGGCCGGGCCCCTGGAGACTGTCGGAAAGGATaGTTAGAACTTACTGGTCCACTGAAGCCAGCCAGC +
Preference number: 6 (lower is better)
Translates to: GRGRAPGDCRKG*LELTGPLKPAS
Trigger: GCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCATCCTTTCCGACAGTCTCCAGGGGCCCGGCCACGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS TCA 72 bp GGAGGATCACAGGAGCCCAGGTGTTTGACGCTGCAGTaGGCCATGGTCATGCCACCGCACTACAGTCTGGGT +
Preference number: 6 (lower is better)
Translates to: GGSQEPRCLTLQ*AMVMPPHYSLG
Trigger: ACCCAGACTGTAGTGCGGTGGCATGACCATGGCTCACTGCAGCGTCAAACACCTGGGCTCCTGTGATCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446941.2
CDS GCA 72 bp AACAACGGGTCCTCCAGCCAGCAGGCTGCCAACGGCTaGTGCCTCAAACATTCTCTGCCCATCGTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: NNGSSSQQAANG*CLKHSLPIVGA
Trigger: TGCTCCAACGATGGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTGCTGGCTGGAGGACCCGTTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS GCA 72 bp GTTGTGGGTGCTGCTCCTCTTTCGTACTTGGCTGTGTaGCCCAGTGTTCTGATCCTGTCCGCCCCACAATGC +
Preference number: 6 (lower is better)
Translates to: VVGAAPLSYLAV*PSVLILSAPQC
Trigger: GCATTGTGGGGCGGACAGGATCAGAACACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS GCA 72 bp CAGCACCAAGCAAGTGGTCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACGATGGACAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: QHQASGPLKPAS*VIIRHTMDRMS
Trigger: GCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCACTTGCTTGGTGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443376.5
CDS CCA 72 bp ACTGTTAGTTTCACATCAGAATTCTTCGAAGGTCGCTaGCGGCTCCGCTGCGGGTTGAGCAGGGTGCCCCGA +
Preference number: 6 (lower is better)
Translates to: TVSFTSEFFEGR*RLRCGLSRVPR
Trigger: TCGGGGCACCCTGCTCAACCCGCAGCGGAGCCGCCAGCGACCTTCGAAGAATTCTGATGTGAAACTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437341.5
CDS CAA 72 bp GGTAGCAGAGTTGTGGGTGCTGCTCCTCTTTCGTACTaGGCTGTGTGCCCCAGTGTTCTGATCCTGTCCGCC +
Preference number: 6 (lower is better)
Translates to: GSRVVGAAPLSY*AVCPSVLILSA
Trigger: GGCGGACAGGATCAGAACACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS CAA 90 bp TTCTCTCTGGGTAGCAGAGTTGTGGGTGCTGCTCCTCTTTCGTACTaGGCTGTGTGCCCCAGTGTTCTGATCCTGTCCGCCCCACAATGC +
Preference number: 6 (lower is better)
Translates to: FSLGSRVVGAAPLSY*AVCPSVLILSAPQC
Trigger: GCATTGTGGGGCGGACAGGATCAGAACACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS TCA 72 bp GCCTGTGCTGCTGTCAGATCGAAGCCCAGGGTCATATaGACAGAGAAGGTCACCACGCTGGCAATCACCACC +
Preference number: 6 (lower is better)
Translates to: ACAAVRSKPRVI*TEKVTTLAITT
Trigger: GGTGGTGATTGCCAGCGTGGTGACCTTCTCTGTTCATATGACCCTGGGCTTCGATCTGACAGCAGCACAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS TCA 72 bp CTGGCCAACAGTGAGAGTGCCTCGGTCGAGTTCTCCTaGACTTGGAATCTTCACGGTCTCTGTGCGTCCCAG +
Preference number: 6 (lower is better)
Translates to: LANSESASVEFS*TWNLHGLCASQ
Trigger: CTGGGACGCACAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS GCA 72 bp TTCACCATGAAGGCTGGTCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACGATGGACAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: FTMKAGPLKPAS*VIIRHTMDRMS
Trigger: GCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGCCTTCATGGTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS GCA 72 bp GCGGACACCGGTTCGGTAATTCAATGCCCAAGTCAGTaGAAGCGACCAAGACCGCACGATTTCCGTCAGGAG +
Preference number: 6 (lower is better)
Translates to: ADTGSVIQCPSQ*KRPRPHDFRQE
Trigger: CTCCTGACGGAAATCGTGCGGTCTTGGTCGCTTGCACTGACTTGGGCATTGAATTACCGAACCGGTGTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS CCA 72 bp AGCCCAGGGTCATATGAACAGAGAAGGTCACCACGCTaGCAATCACCACCACAATGGGAGCCACACCCACAG +
Preference number: 6 (lower is better)
Translates to: SPGSYEQRRSPR*QSPPQWEPHPQ
Trigger: CTGTGGGTGTGGCTCCCATTGTGGTGGTGATTGCCAGCGTGGTGACCTTCTCTGTTCATATGACCCTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS CCA 72 bp GGAGGCTTGCTTGAAGCTGGGAGTTCAACAACAGCCTaGCCAACAGTGAGAGTGCCTCGGTCGAGTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GGLLEAGSSTTA*PTVRVPRSSSP
Trigger: AGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAGGCTGTTGTTGAACTCCCAGCTTCAAGCAAGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS GCA 72 bp AGCAGGCTGCCAACGGCTGCTGCCTCAAACATTCTCTaGCCATCGTTGGAGCAAATGTTGATGAGCTCACCC +
Preference number: 6 (lower is better)
Translates to: SRLPTAAASNIL*PSLEQMLMSSP
Trigger: GGGTGAGCTCATCAACATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGCAGCAGCCGTTGGCAGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS GCA 72 bp GCCATCCCCAGCGAGGACTTCCCAAAATGTTACCAGTaGTTCTCTCTGGGTAGCAGAGTTGTGGGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AIPSEDFPKCYQ*FSLGSRVVGAA
Trigger: AGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATTTTGGGAAGTCCTCGCTGGGGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS GCA 72 bp TGGTTAGAACTTACTGGTCCACTGAAGCCAGCCAGCTaGGTGATCATCAGGCACACGATGGACAGGATGAGC +
Preference number: 6 (lower is better)
Translates to: WLELTGPLKPAS*VIIRHTMDRMS
Trigger: GCTCATCCTGTCCATCGTGTGCCTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS CCA 72 bp ACCACCACAATGGGAGCCACACCCACAGTGATGCTCTaGAAGTACCCAGCTTTTTCCAATATCCGACGCTCC +
Preference number: 6 (lower is better)
Translates to: TTTMGATPTVML*KYPAFSNIRRS
Trigger: GGAGCGTCGGATATTGGAAAAAGCTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTCCCATTGTGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS CCA 72 bp CCCTGGAGACTGTCGGAAAGGATGGTTAGAACTTACTaGTCCACTGAAGCCAGCCAGCTGCGTGATCATCAG +
Preference number: 6 (lower is better)
Translates to: PWRLSERMVRTY*STEASQLRDHQ
Trigger: CTGATGATCACGCAGCTGGCTGGCTTCAGTGGACCAGTAAGTTCTAACCATCCTTTCCGACAGTCTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427120.6
CDS CAA 90 bp AGGACTTCCCAAAATGTTACCAGTGCTTCTCTCTGGGTAGCAGAGTaGTGGGTGCTGCTCCTCTTTCGTACTTGGCTGTGTGCCCCAGTG +
Preference number: 6 (lower is better)
Translates to: RTSQNVTSASLWVAE*WVLLLFRTWLCAPV
Trigger: CACTGGGGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATTTTGGGAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS TCA 72 bp TTGAAGCTGGGAGTTCAACAACAGCCTGGCCAACAGTaGGAGTGCCTCGGTCGAGTTCTCCTGAACTTGGAA +
Preference number: 6 (lower is better)
Translates to: LKLGVQQQPGQQ*ECLGRVLLNLE
Trigger: TTCCAAGTTCAGGAGAACTCGACCGAGGCACTCTCACTGTTGGCCAGGCTGTTGTTGAACTCCCAGCTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438979.6
CDS TCA 72 bp CTCCTCTTTCGTACTTGGCTGTGTGCCCCAGTGTTCTaGTCCTGTCCGCCCCACAATGCCAATCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LLFRTWLCAPVF*SCPPHNANLLF
Trigger: AAAGAGAAGATTGGCATTGTGGGGCGGACAGGATCAGAACACTGGGGCACACAGCCAAGTACGAAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS GCA 72 bp ACTTGGAATCTTCACGGTCTCTGTGCGTCCCAGAAGTaGTGGTTCTCTCCCTCACACTTCTATACCCAGGAC +
Preference number: 6 (lower is better)
Translates to: TWNLHGLCASQK*WFSPSHFYTQD
Trigger: GTCCTGGGTATAGAAGTGTGAGGGAGAGAACCAGCACTTCTGGGACGCACAGAGACCGTGAAGATTCCAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000437205.5
ENST00000437341.5
ENST00000438979.6
ENST00000443376.5
ENST00000446941.2
CDS GCA 72 bp GTCAGGAGGAGGCCCAGCACTAACAACAAGCTGTACTaGAGGTTAGACTCTGTTGCCTGGGTATACTCCAAG +
Preference number: 6 (lower is better)
Translates to: VRRRPSTNNKLY*RLDSVAWVYSK
Trigger: CTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTTAGTGCTGGGCCTCCTCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS CCA 72 bp AATGTTACCAGTGCTTCTCTCTGGGTAGCAGAGTTGTaGGTGCTGCTCCTCTTTCGTACTTGGCTGTGTGCC +
Preference number: 6 (lower is better)
Translates to: NVTSASLWVAEL*VLLLFRTWLCA
Trigger: GGCACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS CAA 72 bp GCATCTTGGCATTCCAACGGTCGAGTTCTCCTGAACTaGGAATCTTCACGGTCTCTGTGCGTCCCAGAAGTG +
Preference number: 6 (lower is better)
Translates to: ASWHSNGRVLLN*ESSRSLCVPEV
Trigger: CACTTCTGGGACGCACAGAGACCGTGAAGATTCCAAGTTCAGGAGAACTCGACCGTTGGAATGCCAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000382494.6
ENST00000392579.6
ENST00000427120.6
ENST00000437205.5
ENST00000437341.5
ENST00000443376.5
CDS CAA 72 bp CCAACGGCTGCTGCCTCAAACATTCTCTGCCCATCGTaGGAGCAAATGTTGATGAGCTCACCCAGGGATTTC +
Preference number: 6 (lower is better)
Translates to: PTAAASNILCPS*EQMLMSSPRDF
Trigger: GAAATCCCTGGGTGAGCTCATCAACATTTGCTCCAACGATGGGCAGAGAATGTTTGAGGCAGCAGCCGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS TCA 72 bp TGGCAATCACCACCACAATGGGAGCCACACCCACAGTaGTGCTCTGGAAGTACCCAGCTTTTTCCAATATCC +
Preference number: 6 (lower is better)
Translates to: WQSPPQWEPHPQ*CSGSTQLFPIS
Trigger: GGATATTGGAAAAAGCTGGGTACTTCCAGAGCATCACTGTGGGTGTGGCTCCCATTGTGGTGGTGATTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1
CDS TCA 72 bp TGGCGAGAGATTCTGCCCAGCTTGACTCTCTCATTCTaGCCGCAGAATACAGCCATCCTGAAAATTTGGTCC +
Preference number: 6 (lower is better)
Translates to: WREILPSLTLSF*PQNTAILKIWS
Trigger: GGACCAAATTTTCAGGATGGCTGTATTCTGCGGTCAGAATGAGAGAGTCAAGCTGGGCAGAATCTCTCGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000382494.6
CDS TCA 72 bp CGCTGCAGTGTAGGGTGTCTGCTCATCTCTTATCTCTaGCATTTTCAATACACGGGCATACCTGTGGCACTC +
Preference number: 6 (lower is better)
Translates to: RCSVGCLLISYL*HFQYTGIPVAL
Trigger: GAGTGCCACAGGTATGCCCGTGTATTGAAAATGTCAGAGATAAGAGATGAGCAGACACCCTACACTGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476402.1
CDS CAA 72 bp CAAAATGTTACCAGTGCTTCTCTCTGGGTAGCAGAGTaGTGGGTGCTGCTCCTCTTTCGTACTTGGCTGTGT +
Preference number: 6 (lower is better)
Translates to: QNVTSASLWVAE*WVLLLFRTWLC
Trigger: ACACAGCCAAGTACGAAAGAGGAGCAGCACCCACAACTCTGCTACCCAGAGAGAAGCACTGGTAACATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443497.1
CDS CCA 72 bp AACAACAAGCTGTACTGCAGGTTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGTTTCACCATGAAGGCT +
Preference number: 6 (lower is better)
Translates to: NNKLYCRLDSVA*VYSKRCFTMKA
Trigger: AGCCTTCATGGTGAAACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
CDS CCA 72 bp AACAACAAGCTGTACTGCAGGTTAGACTCTGTTGCCTaGGTATACTCCAAGAGGTGTTTCACCATGAAGGCA +
Preference number: 6 (lower is better)
Translates to: NNKLYCRLDSVA*VYSKRCFTMKA
Trigger: TGCCTTCATGGTGAAACACCTCTTGGAGTATACCCAGGCAACAGAGTCTAACCTGCAGTACAGCTTGTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492216.1
CDS CAA 90 bp GACTTTACTGAAAACGGTGTTACTTTCAAAGCAAAAGTCATGGAATaGAAGACTGTCACCACTGTGAAAGCCTGTGCTGCTGTCAGATCG +
Preference number: 6 (lower is better)
Translates to: DFTENGVTFKAKVME*KTVTTVKACAAVRS
Trigger: CGATCTGACAGCAGCACAGGCTTTCACAGTGGTGACAGTCTTCAATTCCATGACTTTTGCTTTGAAAGTAACACCGTTTTCAGTAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265586.10
ENST00000334444.11
ENST00000437205.5
ENST00000492216.1