RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC4 (Homo sapiens)

Ensembl gene IDs: ENSG00000125257

Ensembl transcript IDs: ENST00000467685.2, ENST00000484109.1, ENST00000536256.3, ENST00000629385.1, ENST00000642524.1, ENST00000643051.1, ENST00000643556.1, ENST00000643816.1, ENST00000643842.1, ENST00000644471.1, ENST00000644880.1, ENST00000645237.2, ENST00000645532.1, ENST00000646439.1

Found 855 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGAAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTaGCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCAC +
Preference number: 1 (lower is better)
Translates to: EEEGNRQPHSPIQRH*HEHAAGCDHTAEEH
Trigger: GTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 90 bp CTGCTCTTGCAAGGTTTACCCGTGCTTTCTGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACA +
Preference number: 1 (lower is better)
Translates to: LLLQGLPVLSALHSA*FPDLLSQSDHHPPT
Trigger: TGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 90 bp TTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTaGGAAAACACTGGACTCCGAGTTGTAGATTCCAGGCGCTTCACA +
Preference number: 1 (lower is better)
Translates to: LYARMVQSPWREDDK*ENTGLRVVDSRRFT
Trigger: TGTGAAGCGCCTGGAATCTACAACTCGGAGTCCAGTGTTTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR TCA 90 bp GTGCTGTCAGATGCTTCAGTACCAGAGGCCCACCTGGACTGTACATaGAGTTCACATTGTCAAAGATTATCACTCCTTCATGGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: VLSDASVPEAHLDCT*SSHCQRLSLLHGAR
Trigger: CCTGGCCCCATGAAGGAGTGATAATCTTTGACAATGTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTACTGAAGCATCTGACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CCA 90 bp CATCAAACAGTTCCTGACACCTCTCTTCTGCTTTGTATGCCCGGATaGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAACACTG +
Preference number: 1 (lower is better)
Translates to: HQTVPDTSLLLCMPG*SRAPGEKMISGKTL
Trigger: CAGTGTTTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTGTCAGGAACTGTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR TCA 90 bp TGGCTCTCCAGAGCACCATCTTTCAAGGAGGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCTGAGAAGGTACGATTCCTTAGTGTG +
Preference number: 1 (lower is better)
Translates to: WLSRAPSFKEGLEDC*DQTEDSEKVRFLSV
Trigger: CACACTAAGGAATCGTACCTTCTCAGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCCTTGAAAGATGGTGCTCTGGAGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR GCA 90 bp CCTGCACATGCACCATCTTTTTACCATCTGACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAAGTAGCAAAAAGGTCTGGATTCTTC +
Preference number: 1 (lower is better)
Translates to: PAHAPSFYHLTAADG*AVISHQVAKRSGFF
Trigger: GAAGAATCCAGACCTTTTTGCTACTTGATGAGATATCACAGCGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATGGTGCATGTGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 90 bp CACATTGTCAAAGATTATCACTCCTTCATGGGGCCAGGCTGGTGGTaGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGT +
Preference number: 1 (lower is better)
Translates to: HIVKDYHSFMGPGWW*AFLIFPRCFFFKVC
Trigger: ACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTTTGACAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR TCA 90 bp GTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAGCAAGGCACGATATTCCTATCTCCA +
Preference number: 1 (lower is better)
Translates to: VMRTTSQNSFARAGE*LELPSQQGTIFLSP
Trigger: TGGAGATAGGAATATCGTGCCTTGCTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR TCA 90 bp AAGATTATCACTCCTTCATGGGGCCAGGCTGGTGGTGGGCGTTTCTaGTATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATG +
Preference number: 1 (lower is better)
Translates to: KIITPSWGQAGGGRF*YSQGASFSRSVYSM
Trigger: CATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CCA 90 bp GTTGAGACCAAACCGAAGACTCTGAGAAGGTACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAGGTTGTTCACTTTCCTCATTATCCT +
Preference number: 1 (lower is better)
Translates to: VETKPKTLRRYDSLV*EFLELEVVHFPHYP
Trigger: AGGATAATGAGGAAAGTGAACAACCTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTACCTTCTCAGAGTCTTCGGTTTGGTCTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR CCA 90 bp GAAGTTCACATTGTCAAAGATTATCACTCCTTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAG +
Preference number: 1 (lower is better)
Translates to: EVHIVKDYHSFMGPG*WWAFLIFPRCFFFK
Trigger: CTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTTTGACAATGTGAACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR GCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATaGAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGT +
Preference number: 1 (lower is better)
Translates to: HNAESKTATVTVSKS*NSKGGWTVTFVSFS
Trigger: ACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CCA 90 bp ACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATaGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGG +
Preference number: 1 (lower is better)
Translates to: TATVTVSKSCNSKGG*TVTFVSFSIKAPLR
Trigger: CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR GCA 90 bp ACAAATACACAGTTCGAACAAGTGTCTGCTAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAGGAGATAGATGTCAGCATCTTGATA +
Preference number: 1 (lower is better)
Translates to: TNTQFEQVSANFRIY*TERIVQEIDVSILI
Trigger: TATCAAGATGCTGACATCTATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTTAGCAGACACTTGTTCGAACTGTGTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR TCA 90 bp ATTGAATGTTATTTGGGAAAAGGGTATTTGCACATGGAATTAAACTaGGGATGTTGGAGTGAAGACATCATCCTGGATTATCCAAGTGGG +
Preference number: 1 (lower is better)
Translates to: IECYLGKGYLHMELN*GCWSEDIILDYPSG
Trigger: CCCACTTGGATAATCCAGGATGATGTCTTCACTCCAACATCCTCAGTTTAATTCCATGTGCAAATACCCTTTTCCCAAATAACATTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR TCA 90 bp TCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATaGCCCTTTCTACTGAGATCATCATATTCTCAACTTCAGCACTTT +
Preference number: 1 (lower is better)
Translates to: SDIPKVLLFQGLCIQ*PFLLRSSYSQLQHF
Trigger: AAAGTGCTGAAGTTGAGAATATGATGATCTCAGTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR TCA 90 bp CATATATGCAATTTCAGGGAGGTGACACCTTATTCTGAGAGGTCATaGGACTCCACTTCAAACCATAATAGTAAAACCTTTAGTAAACTG +
Preference number: 1 (lower is better)
Translates to: HICNFREVTPYSERS*DSTSNHNSKTFSKL
Trigger: CAGTTTACTAAAGGTTTTACTATTATGGTTTGAAGTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACCTCCCTGAAATTGCATATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR TCA 90 bp AGTTCAAATAAAGTACAAAAGGTCCCAGGAAGTATTGTGGTTTGTTaGTTCATTCAACAGAAAGCCCAAATGACAATGCTATTAGTGGTC +
Preference number: 1 (lower is better)
Translates to: SSNKVQKVPGSIVVC*FIQQKAQMTMLLVV
Trigger: GACCACTAATAGCATTGTCATTTGGGCTTTCTGTTGAATGAATCAACAAACCACAATACTTCCTGGGACCTTTTGTACTTTATTTGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR GCA 90 bp GCAATAATTTTCAGTTTGTCTCATCACGTTAGCAGAGCCTATTCATaGAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTA +
Preference number: 1 (lower is better)
Translates to: AIIFSLSHHVSRAYS*NLERISIQPKPKGL
Trigger: TAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCATGAATAGGCTCTGCTAACGTGATGAGACAAACTGAAAATTATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CCA 90 bp CTAAAAACGTCAGCGGCAGCAAATCATCCAAGTGTCCAATGTCTTTaGAGAAACGATTTAAAATTCTTCCTATTGGATTTCTATCAAAGA +
Preference number: 1 (lower is better)
Translates to: LKTSAAANHPSVQCL*RNDLKFFLLDFYQR
Trigger: TCTTTGATAGAAATCCAATAGGAAGAATTTTAAATCGTTTCTCCAAAGACATTGGACACTTGGATGATTTGCTGCCGCTGACGTTTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp ATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGCCGACCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: IPRARHLTVMTSLLPRGRPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...TCGGCCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 2 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp ATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGCCGAAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: IPRARHLTVMTSLLPRGRNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...TCGGCCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 2 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 2 (lower is better)
Translates to: SAWFPDLLSQSDHHPPTAVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...AGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 2 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 2 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAACTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp TGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAGGGTCTACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: WDILCILALQSTIFQGGSTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...AGACCCTCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGCACTGAGGTTTGCTTaGGGAGGGAGGAGGATTGCT +
Preference number: 2 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSALRFA*GGRRIA
Trigger: AGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
3UTR-3UTR TCA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 2 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 2 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 2 (lower is better)
Translates to: ANSPSTALNSDDFPAPTGSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...CCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGTTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 2 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGACCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 2 (lower is better)
Translates to: CNWDILCILALQSTIFQGPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp CACATAGGCAATTCTTCCATGCACGCTGACCAGCCCGTGACTTGGGGCCAATTCACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 2 (lower is better)
Translates to: HIGNSSMHADQPVTWGQFTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...GAATTGGCCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAATTGCCTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 2 (lower is better)
Translates to: ANSPSTALNSDDFPAPTGWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...CCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATGGGCCAGGCTGGTGGTaGGCGTTTCTGATATTCCCA +
Preference number: 2 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNGPGWW*AFLIFP
Trigger: TGGGAATATCAGAAACGCCCACCACCAGCCTGGCCC...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CAA 90 bp TGCTTCAGTACCAGAGGCCCACCTGGACTGTACATGAAGTTCACATaGTCAAAGATTATCACTCCTTCATGGGGCCAGGCTGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: CFSTRGPPGLYMKFT*SKIITPSWGQAGGG
Trigger: CCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTTTGACAATGTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTACTGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAATTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 2 (lower is better)
Translates to: STQRGSPISYHSQITILQLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAAGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 2 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 2 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATTTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATA +
Preference number: 2 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNFMGPG*WWAFLI
Trigger: TATCAGAAACGCCCACCACCAGCCTGGCCCCATGAA...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CAA 90 bp ACATGGCACAGATGGCATCCAGACGGACGGCAAACCAGCGGGACGTaGTCAAAAACAAGAACCAAGCCTCTGAATGTAAATCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: TWHRWHPDGRQTSGT*SKTRTKPLNVNPGV
Trigger: CACACCAGGATTTACATTCAGAGGCTTGGTTCTTGTTTTTGACAACGTCCCGCTGGTTTGCCGTCCGTCTGGATGCCATCTGTGCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp ATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGCCGATTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: IPRARHLTVMTSLLPRGRFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...TCGGCCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAAGCACTGAGGTTTGCTTaGGGAGGGAGGAGGATTGCT +
Preference number: 2 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEALRFA*GGRRIA
Trigger: AGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGC...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643556.1
3UTR-3UTR TCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 2 (lower is better)
Translates to: STQRGSPISYHSQITILQVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 2 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 2 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643556.1
3UTR-3UTR TCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTCTGATATTAAACATGTaGCCAGGCTGGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: ATATETTPTTCSNVWMKSLILNM*PGWVWW
Trigger: CCACCACACCCAGCCTGGTCACATGTTTAATATCAG...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643051.1
3UTR-3UTR GCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATAGTGCCAAACCAACCTaGCCGGCATCCAGAGTTTTT +
Preference number: 2 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNSAKPT*PASRVF
Trigger: AAAAACTCTGGATGCCGGGCAGGTTGGTTTGGCACT...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: SSKKVWILRMLTIASDTLSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 2 (lower is better)
Translates to: CNWDILCILALQSTIFQGARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGACATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 2 (lower is better)
Translates to: CNWDILCILALQSTIFQGHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATGCATCAAACAGTTCCTaGCACCTCTCTTCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNASNSS*HLSSAL
Trigger: CAAAGCAGAAGAGAGGTGTCAGGAACTGTTTGATGC...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGAAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 2 (lower is better)
Translates to: LALKNEAKFIPLRQELLRNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 2 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 2 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 2 (lower is better)
Translates to: TSFMVLILASVKVAVLLLKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 2 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR CCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 2 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp CAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 2 (lower is better)
Translates to: QRGSPISYHSQITILQQLKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...CAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 2 (lower is better)
Translates to: TLATPLQGAVSGLLAALNSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGAAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 2 (lower is better)
Translates to: LALKNEAKFIPLRQELLRKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 2 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAACTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 2 (lower is better)
Translates to: STSLYDFFISFLFVFLPKLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGACAGGAGAATCACTTaGACCCAGGAGGTGGAGGTT +
Preference number: 2 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLDRRIT*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGTC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
3UTR-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCAGAAGGAAGGTATCTaGAATTCAGAATACATAAAG +
Preference number: 2 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSQKEGI*NSEYIK
Trigger: CTTTATGTATTCTGAATTGCAGATACCTTCCTTCTG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000643556.1
3UTR-3UTR GCA 90 bp TCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTCAGAAGGAAGGTATCTaGAATTCAGAATACATAAAG +
Preference number: 2 (lower is better)
Translates to: SAWFPDLLSQSDHHPPTAQKEGI*NSEYIK
Trigger: CTTTATGTATTCTGAATTGCAGATACCTTCCTTCTG...AGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643556.1
3UTR-3UTR CCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CAA 90 bp ATAATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTaGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCG +
Preference number: 2 (lower is better)
Translates to: IMPRISGMSVRGLAF*GSVTMLSLKLQQLP
Trigger: CGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR-3UTR TCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp CTGGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTCGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 2 (lower is better)
Translates to: LVVGVSDIPKVLLFQGLCRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...ACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 2 (lower is better)
Translates to: DIPISIQSRAVTAIACSGSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp TTCTCCTCTGATAGTGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 2 (lower is better)
Translates to: FSSDSVTGTFSVSWLSRAPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...TGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACACTATCAGAGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 2 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR CCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAACTTGTAGCAATGTCTaGATGAAATCTAAAAACGTC +
Preference number: 2 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKTCSNV*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGACATTGCTACAAGT...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 2 (lower is better)
Translates to: TSFMVLILASVKVAVLLLKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 2 (lower is better)
Translates to: CNWDILCILALQSTIFQGKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 2 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR TCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAAACAACAAAAACCTGTaGCAACTTTGTCCTACTCCT +
Preference number: 2 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLNNKNL*QLCPTP
Trigger: AGGAGTAGGACAAAGTTGTCACAGGTTTTTGTTGTT...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR-3UTR CCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 2 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAAGAGCTGGAGATCCTTaGATAAGTTGGGAGAAATAT +
Preference number: 2 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLRAGDP*ISWEKY
Trigger: ATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCT...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 2 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACTCCTCATTGTTCCAGTaGACAAAACAGGTTCATAAG +
Preference number: 2 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYSSLFQ*TKQVHK
Trigger: CTTATGAACCTGTTTTGTTCACTGGAACAATGAGGA...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643051.1
3UTR-3UTR CCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTCCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 2 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR CCA 90 bp TTTTATTATCCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 2 (lower is better)
Translates to: FYYPYTSYNFIHGPDPGIKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...GATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGGATAATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CAA 90 bp TCTAAAAACGTCAGCGGCAGCAAATCATCCAAGTGTCCAATGTCTTaGGAGAAACGATTTAAAATTCTTCCTATTGGATTTCTATCAAAG +
Preference number: 2 (lower is better)
Translates to: SKNVSGSKSSKCPMS*EKRFKILPIGFLSK
Trigger: CTTTGATAGAAATCCAATAGGAAGAATTTTAAATCGTTTCTCCAAAGACATTGGACACTTGGATGATTTGCTGCCGCTGACGTTTTTAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR GCA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 2 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR GCA 72 bp GGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTaGCACGAACACGCGGCTGGCTGTGATCACACTGCC +
Preference number: 3 (lower is better)
Translates to: GNRQPHSPIQRH*HEHAAGCDHTA
Trigger: GGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGTCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR GCA 72 bp CTGGTGTGCATCAAACAGTTCCTGACACCTCTCTTCTaGTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: LVCIKQFLTPLF*FVCPDGPEPLE
Trigger: CTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTGTCAGGAACTGTTTGATGCACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR GCA 72 bp ATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGGAAGTGTAAGAACACT +
Preference number: 3 (lower is better)
Translates to: ISIQSRAVTAIA*SGPAHRKCKNT
Trigger: AGTGTTCTTACACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 72 bp CAAGGTTTACCCGTGCTTTCTGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCACAGTCAGATCACCAT +
Preference number: 3 (lower is better)
Translates to: QGLPVLSALHSA*FPDLLSQSDHH
Trigger: ATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 72 bp GTTCCTGACACCTCTCTTCTGCTTTGTATGCCCGGATaGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGG +
Preference number: 3 (lower is better)
Translates to: VPDTSLLLCMPG*SRAPGEKMISG
Trigger: CCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTGTCAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CCA 72 bp CGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTaGGAAAACACTGGACTCCGAGTTGTAGATTCCAGG +
Preference number: 3 (lower is better)
Translates to: RMVQSPWREDDK*ENTGLRVVDSR
Trigger: CCTGGAATCTACAACTCGGAGTCCAGTGTTTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCAGCACTGAGGTTTGCTaGAGGAGGGAGGAGGATTGC +
Preference number: 3 (lower is better)
Translates to: SSKKVWILRMLTIASDTLSTEVC*RREEDC
Trigger: GCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCT...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643556.1
3UTR-3UTR CAA 90 bp CAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 3 (lower is better)
Translates to: QRGSPISYHSQITILQQLLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...CAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 3 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643556.1
3UTR-3UTR CAA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: DIPISIQSRAVTAIACSGFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 3 (lower is better)
Translates to: TSFMVLILASVKVAVLLLLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR GCA 72 bp TCTTTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGCAGCACTGAATACATA +
Preference number: 3 (lower is better)
Translates to: SLSQNPCNSSPR*CERSSGSTEYI
Trigger: TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR GCA 72 bp CAGTTCGAACAAGTGTCTGCTAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAGGAGATAGATGTCAGC +
Preference number: 3 (lower is better)
Translates to: QFEQVSANFRIY*TERIVQEIDVS
Trigger: GCTGACATCTATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTTAGCAGACACTTGTTCGAACTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CCA 72 bp GTCAAAGATTATCACTCCTTCATGGGGCCAGGCTGGTaGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTT +
Preference number: 3 (lower is better)
Translates to: VKDYHSFMGPGW*WAFLIFPRCFF
Trigger: AAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CCA 72 bp ATTGTCAAAGATTATCACTCCTTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTC +
Preference number: 3 (lower is better)
Translates to: IVKDYHSFMGPG*WWAFLIFPRCF
Trigger: GAAGCACCTTGGGAATATCAGAAACGCCCACCACCAGCCTGGCCCCATGAAGGAGTGATAATCTTTGACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp CTGGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 3 (lower is better)
Translates to: LVVGVSDIPKVLLFQGLCLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...ACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR-3UTR CAA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 3 (lower is better)
Translates to: SSKKVWILRMLTIASDTLMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp TGTAAGGCATTCCACAGTTCCTCATCCGTGTGCTCATTAAAGGGATCCAGGTTTAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 3 (lower is better)
Translates to: CKAFHSSSSVCSLKGSRFKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...AAACCTGGATCCCTTTAATGAGCACACGGATGAGGAACTGTGGAATGCCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR TCA 72 bp TGCACATGCACCATCTTTTTACCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATCTCATCAAGTAGCAAA +
Preference number: 3 (lower is better)
Translates to: CTCTIFLPSDGS*RLRCDISSSSK
Trigger: TTTGCTACTTGATGAGATATCACAGCGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATGGTGCATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR GCA 72 bp GCACCATCTTTTTACCATCTGACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAAGTAGCAAAAAGGTCT +
Preference number: 3 (lower is better)
Translates to: APSFYHLTAADG*AVISHQVAKRS
Trigger: AGACCTTTTTGCTACTTGATGAGATATCACAGCGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATGGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 3 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR CCA 72 bp GAGTGCTGTCAGATGCTTCAGTACCAGAGGCCCACCTaGACTGTACATGAAGTTCACATTGTCAAAGATTAT +
Preference number: 3 (lower is better)
Translates to: ECCQMLQYQRPT*TVHEVHIVKDY
Trigger: ATAATCTTTGACAATGTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTACTGAAGCATCTGACAGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CCA 72 bp GTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATaGACGGTCACATTTGTGTCCTTCAGTATCAAAGCA +
Preference number: 3 (lower is better)
Translates to: VTVSKSCNSKGG*TVTFVSFSIKA
Trigger: TGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR-3UTR CAA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 3 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 3 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 3 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR TCA 72 bp GATGCTTCAGTACCAGAGGCCCACCTGGACTGTACATaGAGTTCACATTGTCAAAGATTATCACTCCTTCAT +
Preference number: 3 (lower is better)
Translates to: DASVPEAHLDCT*SSHCQRLSLLH
Trigger: ATGAAGGAGTGATAATCTTTGACAATGTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTACTGAAGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 3 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR-3UTR CAA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAATCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 3 (lower is better)
Translates to: STSLYDFFISFLFVFLPKSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR TCA 72 bp AATTTCAGGGAGGTGACACCTTATTCTGAGAGGTCATaGGACTCCACTTCAAACCATAATAGTAAAACCTTT +
Preference number: 3 (lower is better)
Translates to: NFREVTPYSERS*DSTSNHNSKTF
Trigger: AAAGGTTTTACTATTATGGTTTGAAGTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACCTCCCTGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CCA 72 bp ACTGAATACATATCATCTTCCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGATTGAGCCACCTTTCC +
Preference number: 3 (lower is better)
Translates to: TEYISSSSNLRL*PILNKGLSHLS
Trigger: GGAAAGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000643556.1
3UTR TCA 72 bp TATTTGGGAAAAGGGTATTTGCACATGGAATTAAACTaGGGATGTTGGAGTGAAGACATCATCCTGGATTAT +
Preference number: 3 (lower is better)
Translates to: YLGKGYLHMELN*GCWSEDIILDY
Trigger: ATAATCCAGGATGATGTCTTCACTCCAACATCCTCAGTTTAATTCCATGTGCAAATACCCTTTTCCCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR TCA 72 bp AAAGTACAAAAGGTCCCAGGAAGTATTGTGGTTTGTTaGTTCATTCAACAGAAAGCCCAAATGACAATGCTA +
Preference number: 3 (lower is better)
Translates to: KVQKVPGSIVVC*FIQQKAQMTML
Trigger: TAGCATTGTCATTTGGGCTTTCTGTTGAATGAATCAACAAACCACAATACTTCCTGGGACCTTTTGTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR TCA 72 bp ACATTAACCATACGTGTATTTCTAAGTACTAGGAGTTaGACAGCTACTACGGTCAATGTATTTTGGCAGTTA +
Preference number: 3 (lower is better)
Translates to: TLTIRVFLSTRS*TATTVNVFWQL
Trigger: TAACTGCCAAAATACATTGACCGTAGTAGCTGTTCAACTCCTAGTACTTAGAAATACACGTATGGTTAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTGAGGGCAGCGGCTTCTaGCTTGCCCAGTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGEGSGF*LAQLLH
Trigger: GTGCAACAACTGGGCAAGGCAGAAGCCGCTGCCCTC...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCTGATCAGGCGGCGGTaGCCGCGGGCTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLIRRR*PRAPLL
Trigger: CAGGAGCGGAGCCCGCGGCCACCGCCGCCTGATCAG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR TCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: ANSPSTALNSDDFPAPTGVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...CCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCTCAAGCAGGGATGCTaGGGCTCCGGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLKQGC*GSGRHA
Trigger: GGCGTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR TCA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGGGTGGTGGGCGTTTCTaGTATTCCCAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLGGGRF*YSQGAS
Trigger: AGAAGCACCTTGGGAATATCAGAAACGCCCACCACC...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGACCTCAAGCAGGGATaGTGGGGCTCCGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSDLKQG*WGSGRH
Trigger: GTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAGGTC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR GCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTCAAGCAGGGATGCTaGGGCTCCGGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLKQGC*GSGRHA
Trigger: GGCGTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAACTCAAGCAGGGATGCTaGGGCTCCGGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKLKQGC*GSGRHA
Trigger: GGCGTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAG...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCTCTTCTGCTTTGTATaGCCGGATGGTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTLFCFV*PDGPEP
Trigger: GGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAG...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGACCTCAAGCAGGGATaGTGGGGCTCCGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLDLKQG*WGSGRH
Trigger: GTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAGGTC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR GCA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCCCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACACTCAAGCAGGGATGCTaGGGCTCCGGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTLKQGC*GSGRHA
Trigger: GGCGTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAG...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACAACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IPRGTKGIAIQGITATATTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...TGTGGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATGGCAGGAGGACTGCTTaGACACAGGAGGTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNGRRTA*TQEVEA
Trigger: AGCCTCCACCTCCTGTGTTCAAGCAGTCCTCCTGCC...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTGTTAGCACGGTGCAGTaGGCAAATTTCTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGVSTVQ*ANFSRI
Trigger: AATCCGGGAGAAATTTGCCCACTGCACCGTGCTAAC...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp TGTAAGGCATTCCACAGTTCCTCATCCGTGTGCTCATTAAAGGGATCCAGGTTTCTGATCAGGCGGCGGTaGCCGCGGGCTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: CKAFHSSSSVCSLKGSRFLIRRR*PRAPLL
Trigger: CAGGAGCGGAGCCCGCGGCCACCGCCGCCTGATCAG...AAACCTGGATCCCTTTAATGAGCACACGGATGAGGAACTGTGGAATGCCTTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTACTGATCAGGCGGCGGTaGCCGCGGGCTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVLIRRR*PRAPLL
Trigger: CAGGAGCGGAGCCCGCGGCCACCGCCGCCTGATCAG...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTCTTCCATGCACGCTaGCCAGCCCGTGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSFFHAR*PARDLG
Trigger: CCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CACATAGGCAATTCTTCCATGCACGCTGACCAGCCCGTGACTTGGGGCCAATTCTCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HIGNSSMHADQPVTWGQFSEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGA...GAATTGGCCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAATTGCCTATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR TCA 90 bp GACTATCTGGCCTGTGGTTGTCTTCCCCATGGCCATGTTACTAAGACGAAGTGCAGGTGGAGGCTGCAGTaGGCTGAGACTGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: DYLACGCLPHGHVTKTKCRWRLQ*AETAPL
Trigger: CAGTGGCGCAGTCTCAGCTCACTGCAGCCTCCACCT...GCACTTCGTCTTAGTAACATGGCCATGGGGAAGACAACCACAGGCCAGATAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR TCA 90 bp CTGGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTCTCGGCTGGAGCCTGTaGAGCAGCCGCTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LVVGVSDIPKVLLFQGLCLGWSL*SSRFRE
Trigger: CTCCCGGAAGCGGCTGCTTCACAGGCTCCAGCCGAG...ACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR GCA 90 bp GCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGCAATGGTTAGCACGGTaGAGTGGGCAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: ANSPSTALNSDDFPAPTGQWLAR*SGQISP
Trigger: GGGAGAAATTTGCCCACTGCACCGTGCTAACCATTG...CCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGTTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: STQRGSPISYHSQITILQVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTCCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCCTTTGTATGCCCGGATaGTCCAGAGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGLCMPG*SRAPGE
Trigger: CTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCCTCAAGCAGGGATGCTaGGGCTCCGGCCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCLKQGC*GSGRHA
Trigger: GGCGTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAG...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCTGATCAGGCGGCGGTaGCCGCGGGCTCCGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLALIRRR*PRAPLL
Trigger: CAGGAGCGGAGCCCGCGGCCACCGCCGCCTGATCAG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSRPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATAGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: CNSSPRCCERSSGSTEYIDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GACTATCTGGCCTGTGGTTGTCTTCCCCATGGCCATGTTACTAAGACGAAGTGCCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: DYLACGCLPHGHVTKTKCPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...GCACTTCGTCTTAGTAACATGGCCATGGGGAAGACAACCACAGGCCAGATAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTGATCCCATCTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGDPISG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGAGATGGGATC...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643556.1
CDS-3UTR TCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATGCACTGAGGTTTGCTTaGGGAGGGAGGAGGATTGCT +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNALRFA*GGRRIA
Trigger: AGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGC...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643556.1
CDS-3UTR GCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGAGGGCAGCGGCTTCTaGCTTGCCCAGTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKEGSGF*LAQLLH
Trigger: GTGCAACAACTGGGCAAGGCAGAAGCCGCTGCCCTC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAGGGTCTCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: WDILCILALQSTIFQGGSQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...AGACCCTCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLRPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTGGAGACCTGCTAGTCTaGTGGCTGAGGCAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTGDLLV*WLRQED
Trigger: GTCCTCCTGCCTCAGCCACCAGACTAGCAGGTCTCC...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR TCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGTTTTGCTGTTTCAGTaGGGGCAGCGGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWVLLFQ*GQRLLP
Trigger: AGGCAGAAGCCGCTGCCCTCACTGAAACAGCAAAAC...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACCGAAGACTCTGAGAAGGTACGATTCCTTAGTGTGGGAGTTCCTGGAACTGGACTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TEDSEKVRFLSVGVPGTGLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...TCCAGTTCCAGGAACTCCCACACTAAGGAATCGTACCTTCTCAGAGTCTTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACAGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: IPRGTKGIAIQGITATATGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...TGTGGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGAGGGCATAGGACAGTaGCAAACCAACCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTEGIGQ*QTNLPG
Trigger: GCCGGGCAGGTTGGTTTGGCACTGTCCTATGCCCTC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCGACCTCAAGCAGGGATaGTGGGGCTCCGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCDLKQG*WGSGRH
Trigger: GTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAGGTC...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGATGGGGCCAGGCTGGTaGTGGGCGTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWMGPGW*WAFLIF
Trigger: GAATATCAGAAACGCCCACCACCAGCCTGGCCCCAT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGTGAAGACATCATCCTaGATTATCCAAGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRVKTSS*IIQVGP
Trigger: AGGACCCACTTGGATAATCCAGGATGATGTCTTCAC...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: STQRGSPISYHSQITILQARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGAACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: LALKNEAKFIPLRQELLRTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGCCGATTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: IPRARHLTVMTSLLPRGRFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...TCGGCCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAACAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCQRFAS*SGLGFT
Trigger: GGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTG...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTCCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTCTTTGTATGCCCGGATaGTCCAGAGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSLCMPG*SRAPGE
Trigger: CTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAATTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKFMGPG*WWAFLI
Trigger: TATCAGAAACGCCCACCACCAGCCTGGCCCCATGAA...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTGGGCTTCACCTCCTaGTACACGGGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLGFTS*YTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CCA 90 bp TGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAGGGTCTTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: WDILCILALQSTIFQGGSCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...AGACCCTCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SSKKVWILRMLTIASDTLALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGGACCTGCTAGTCTGGTaGCTGAGGCAGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMDLLVW*LRQEDC
Trigger: GCAGTCCTCCTGCCTCAGCCACCAGACTAGCAGGTC...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTCTCTCCAAGGTGCTGTaGGCGGTCTTCTGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFLSKVL*AVFWQH
Trigger: GTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAG...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGAACACGCGGCTGGCTGTaGTCACACTGCCGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LALKNEAKFIPLRQELLRTRGWL*SHCRGA
Trigger: TGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGT...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAAACGCTGACCAGCCCGTaGCTTGGGGCCAATTCCCCG +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQTLTSP*LGANSP
Trigger: CGGGGAATTGGCCCCAAGTCACGGGCTGGTCAGCGT...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGTTCTTCCATGCACGCTaGCCAGCCCGTGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQFFHAR*PARDLG
Trigger: CCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAA...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTTCTTCCATGCACGCTaGCCAGCCCGTGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCFFHAR*PARDLG
Trigger: CCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GPIPRARHLTVMTSLLPREHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCTCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRGLEDC*DQTEDS
Trigger: AGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACC...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCCTGATATTAAACATGTaGCCAGGCTGGGTGTGGTGG +
Preference number: 4 (lower is better)
Translates to: MIPRGTKGIAIQGITATALILNM*PGWVWW
Trigger: CCACCACACCCAGCCTGGTCACATGTTTAATATCAG...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR GCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACACAGCGGCTTCTGCCTTaGCCAGTTGTTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTQRLLP*PVVAPS
Trigger: AGATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTG...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGACCTCAAGCAGGGATaGTGGGGCTCCGGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLDLKQG*WGSGRH
Trigger: GTGGCGGCCGGAGCCCCAGCATCCCTGCTTGAGGTC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCCCATACAGCGTCACTaGCACGAACACGCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAPIQRH*HEHAAG
Trigger: GCCAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLCKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTTGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGCKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: CNSSPRCCERSSGSTEYICKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: STQRGSPISYHSQITILQNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGTCAATCTGTGTGCAATaGTTAGCACGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWSICVQ*LARCSG
Trigger: CCCACTGCACCGTGCTAACCATTGCACACAGATTGA...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGGGGCCAGGCTGGTGGTaGGCGTTTCTGATATTCCCA +
Preference number: 4 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMGPGWW*AFLIFP
Trigger: TGGGAATATCAGAAACGCCCACCACCAGCCTGGCCC...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGGGCCAGGCTGGTGGTaGGCGTTTCTGATATTCCCA +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVGPGWW*AFLIFP
Trigger: TGGGAATATCAGAAACGCCCACCACCAGCCTGGCCC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ACCGAAGACTCTGAGAAGGTACGATTCCTTAGTGTGGGAGTTCCTGGAACTGGATTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: TEDSEKVRFLSVGVPGTGFMGPG*WWAFLI
Trigger: TATCAGAAACGCCCACCACCAGCCTGGCCCCATGAA...TCCAGTTCCAGGAACTCCCACACTAAGGAATCGTACCTTCTCAGAGTCTTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAACGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGERPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: STQRGSPISYHSQITILQSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACAAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: IPRGTKGIAIQGITATATSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...TGTGGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTATGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLADQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCTGTCGGTTAGAGGTTTaGCCTTCTTGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGCRLEV*PSWEVS
Trigger: TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACA...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCGTTTTGCTGTTTCAGTaGGGGCAGCGGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGVLLFQ*GQRLLP
Trigger: AGGCAGAAGCCGCTGCCCTCACTGAAACAGCAAAAC...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTCCAGAAGAACACGCGTaGGCAGAGGTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSPEEHA*AEVRVL
Trigger: CAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGG...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAACCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGCCTTCGGAACGGACTTaGCATTTTGGTTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMPSERT*HFGWIH
Trigger: GTGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGG...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGAGTTCCTCATCCGTGTaGTCATTAAAGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWSSSSV*SLKGSR
Trigger: CCTGGATCCCTTTAATGAGCACACGGATGAGGAACT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAGCGGCTTCTGCCTTaGCCAGTTGTTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSQRLLP*PVVAPS
Trigger: AGATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTG...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGAGGGCATAGGACAGTaGCAAACCAACCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLEGIGQ*QTNLPG
Trigger: GCCGGGCAGGTTGGTTTGGCACTGTCCTATGCCCTC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGAGGGCATAGGACAGTaGCAAACCAACCTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLREGIGQ*QTNLPG
Trigger: GCCGGGCAGGTTGGTTTGGCACTGTCCTATGCCCTC...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTGTCACTGCAATCGCCTaGAGTGGTCCTGCCCACAGG +
Preference number: 4 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGVTAIA*SGPAHR
Trigger: CCTGTGGGCAGGACCACTGCAGGCGATTGCAGTGAC...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGCGGTTCTTCCCACAATaGCAACCTTTTCTTGTGATT +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRRFFPQ*QPFLVI
Trigger: AATCACAAGAAAAGGTTGGCATTGTGGGAAGAACCG...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTCCAGGCAGGGTGGGGTaGGCCTGTAATTCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVPGRVG*ACNSSY
Trigger: GTAGCTGGAATTACAGGCGCACCCCACCCTGCCTGG...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CCA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCCAAACATGGCACAGATaGCATCCAGACGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: SSKKVWILRMLTIASDTLQTWHR*HPDGRQ
Trigger: TTGCCGTCCGTCTGGATGCCATCTGTGCCATGTTTG...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATTATCACTCCTTCATaGGGCCAGGCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVIITPS*GQAGGG
Trigger: CCCACCACCAGCCTGGCCCCATGAAGGAGTGATAAT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTCGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVRPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGSRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATAAGCAGATTGACTATCTaGCCTGTGGTTGTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CNSSPRCCERSSGSTEYISRLTI*PVVVFP
Trigger: GGGGAAGACAACCACAGGCCAGATAGTCAATCTGCT...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGECNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTTGCAATCGCCTGCAGTaGTCCTGCCCACAGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFCNRLQ*SCPQEV
Trigger: CACTTCCTGTGGGCAGGACCACTGCAGGCGATTGCA...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAAGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATTCTCTGTATCTTaGCTCTCCAGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNTFSVS*LSRAPS
Trigger: AGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGT...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAATACCAGAGGCCCACCTaGACTGTACATGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKYQRPT*TVHEVH
Trigger: GTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTA...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATAACGGCATTTAACTGGTaGCCTGCACCTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: CNSSPRCCERSSGSTEYITAFNW*PAPLIW
Trigger: CCAAATCAGAGGTGCAGGCCACCAGTTAAATGCCGT...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGAGTTTTGCTGTTTCAGTaGGGGCAGCGGCTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: CNWDILCILALQSTIFQGVLLFQ*GQRLLP
Trigger: AGGCAGAAGCCGCTGCCCTCACTGAAACAGCAAAAC...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAATTCTTCCATGCACGCTaGCCAGCCCGTGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQFFHAR*PARDLG
Trigger: CCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAA...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSGLEDC*DQTEDS
Trigger: AGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACAGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: IPRGTKGIAIQGITATATGLEDC*DQTEDS
Trigger: AGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACC...TGTGGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGATCCCATCTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSDPISG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGAGATGGGATC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGACAGGAGAATCACTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVDRRIT*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGTC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR GCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATCAATGGTTAGCACGGTaGAGTGGGCAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNQWLAR*SGQISP
Trigger: GGGAGAAATTTGCCCACTGCACCGTGCTAACCATTG...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGACAGCGGCTTCTGCCTTaGCCAGTTGTTGCACCATCT +
Preference number: 4 (lower is better)
Translates to: CNWDILCILALQSTIFQGQRLLP*PVVAPS
Trigger: AGATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTG...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp TTCTCCTCTGATAGTGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCAAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FSSDSVTGTFSVSWLSRANSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...TGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACACTATCAGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATTTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCTGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGCKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSCKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGATGAGTGCTGTCAGATaGTTCAGTACCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLMSAVR*FSTRGP
Trigger: TGGGCCTCTGGTACTGAAGCATCTGACAGCACTCAT...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGATCCTGAGAACGTACTaGATAATTATAGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTILRTY*IIIVNA
Trigger: AGCATTGACTATAATTATGCAGTACGTTCTCAGGAT...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTGTTAGCACGGTGCAGTaGGCAAATTTCTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSVSTVQ*ANFSRI
Trigger: AATCCGGGAGAAATTTGCCCACTGCACCGTGCTAAC...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGTTAGCACGGTGCAGTaGGCAAATTTCTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTVSTVQ*ANFSRI
Trigger: AATCCGGGAGAAATTTGCCCACTGCACCGTGCTAAC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATATGGTCCAGAGCCCCTaGAGAGAAGATGATAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNMVQSP*REDDKW
Trigger: CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCAT...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTCTTTGTATGCCCGGATaGTCCAGAGCCCCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVLCMPG*SRAPGE
Trigger: CTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCCAAACATGGCACAGATaGCATCCAGACGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGQTWHR*HPDGRQ
Trigger: TTGCCGTCCGTCTGGATGCCATCTGTGCCATGTTTG...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTTTGGGCTTCACCTCCTaGTACACGGGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFLGFTS*YTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAA...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATTGGGCTTCACCTCCTaGTACACGGGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVLGFTS*YTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAA...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLYDSLV*EFLELE
Trigger: CTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCACATTCTCTGTATCTTaGCTCTCCAGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSTFSVS*LSRAPS
Trigger: AGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATCCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SSKKVWILRMLTIASDTLKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CACATAGGCAATTCTTCCATGCACGCTGACCAGCCCGTGACTTGGGGCCAATTCAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: HIGNSSMHADQPVTWGQFKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...GAATTGGCCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAATTGCCTATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AGTAGCAAAAAGGTCTGGATTCTTCGGATGCTGACGATTGCCTCTGACACCCTCTACCAGAGGCCCACCTaGACTGTACATGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: SSKKVWILRMLTIASDTLYQRPT*TVHEVH
Trigger: GTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTA...GAGGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR CAA 72 bp ACCAGAGGCCCACCTGGACTGTACATGAAGTTCACATaGTCAAAGATTATCACTCCTTCATGGGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TRGPPGLYMKFT*SKIITPSWGQA
Trigger: AGCCTGGCCCCATGAAGGAGTGATAATCTTTGACAATGTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TGTAAGGCATTCCACAGTTCCTCATCCGTGTGCTCATTAAAGGGATCCAGGTTTTGTCGAACACACCACTaGAACATCCCCATGAGCGTG +
Preference number: 4 (lower is better)
Translates to: CKAFHSSSSVCSLKGSRFCRTHH*NIPMSV
Trigger: CACGCTCATGGGGATGTTTCAGTGGTGTGTTCGACA...AAACCTGGATCCCTTTAATGAGCACACGGATGAGGAACTGTGGAATGCCTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGGGTCTGTGTATTCAATaGCCCTTTCTACTGAGATCA +
Preference number: 4 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMGLCIQ*PFLLRS
Trigger: TGATCTCAGTAGAAAGGGTCATTGAATACACAGACC...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCGCAAGGGCAGGAGAATaGTTAGAACTGCCATCCCAG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCARAGE*LELPSQ
Trigger: CTGGGATGGCAGTTCTAATCATTCTCCTGCCCTTGC...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATTCTTCCATGCACGCTaGCCAGCCCGTGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLFFHAR*PARDLG
Trigger: CCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGTCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLGLEDC*DQTEDS
Trigger: AGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GACTATCTGGCCTGTGGTTGTCTTCCCCATGGCCATGTTACTAAGACGAAGTGCAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: DYLACGCLPHGHVTKTKCSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...GCACTTCGTCTTAGTAACATGGCCATGGGGAAGACAACCACAGGCCAGATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGATCCCATCTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLDPISG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGAGATGGGATC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCGTAGCAATGTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: MIPRGTKGIAIQGITATAVAMSG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGACATTGCTAC...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCGCCAACCTTTTCTTGTaGTTTAATGAGTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTANLFL*FNECCQ
Trigger: CTGACAGCACTCATTAAATCACAAGAAAAGGTTGGC...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGCAGGTTCCTGAGGTATaGTTGACATCTTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMQVPEV*LTSSSL
Trigger: TAAGGAAGAAGATGTCAATCATACCTCAGGAACCTG...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATAACAAAACAGGTTCCTaGGGTATGATTGACATCTTC +
Preference number: 4 (lower is better)
Translates to: TLATPLQGAVSGLLAALNNKTGS*GMIDIF
Trigger: GAAGATGTCAATCATACCTCAGGAACCTGTTTTGTT...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp TCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTTATTCTGAGAGGTCATaGGACTCCACTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: SAWFPDLLSQSDHHPPTAYSERS*DSTSNH
Trigger: ATGGTTTGAAGTGGAGTCTCATGACCTCTCAGAATA...AGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAGGTGACACCTTATTCTaGGAGGTCATGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSGDTLF*EVMRLH
Trigger: GTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACC...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGCAATTTCAGGGAGGTaGCACCTTATTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTAISGR*HLILRG
Trigger: ACCTCTCAGAATAAGGTGTCACCTCCCTGAAATTGC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAAGTTCCTCATCCGTGTaGTCATTAAAGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTSSSSV*SLKGSR
Trigger: CCTGGATCCCTTTAATGAGCACACGGATGAGGAACT...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGCTCTTCTGCTTTGTATaGCCGGATGGTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRLFCFV*PDGPEP
Trigger: GGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAG...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTAACTCCTCTCCAAGGTaGTGTGAGCGGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSNSSPR*CERSSG
Trigger: GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAAGTGCCAAACCAACCTaGCCGGCATCCAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSSAKPT*PASRVF
Trigger: AAAAACTCTGGATGCCGGGCAGGTTGGTTTGGCACT...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCATGGTCCAGAGCCCCTaGAGAGAAGATGATAAGTGG +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGMVQSP*REDDKW
Trigger: CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCAT...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTATGGGGCCAGGCTGGTaGTGGGCGTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSMGPGW*WAFLIF
Trigger: GAATATCAGAAACGCCCACCACCAGCCTGGCCCCAT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTTGGGCTTCACCTCCTaGTACACGGGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGLGFTS*YTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAA...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTTTGGGCTTCACCTCCTaGTACACGGGCAGCATCTTG +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLLGFTS*YTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAA...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTACGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLRPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGCGAGATCCCATCTCTaGATGAAATCTAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSARSHL*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGAGATGGGATCTCGC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp CGGATGCTGACGATTGCCTCTGACACCCTCTCAATGGCTGAGGGGAAGAAGAGGTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RMLTIASDTLSMAEGKKRFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...CCTCTTCTTCCCCTCAGCCATTGAGAGGGTGTCAGAGGCAATCGTCAGCATCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACGGACTTGACATTTTaGTTGGATTCACAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MIPRGTKGIAIQGITATATDLTF*LDSQCC
Trigger: ACAGCACTGTGAATCCAACCAAAATGTCAAGTCCGT...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGACGGTCAATGTATTTTaGCAGTTAGCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWTVNVF*QLAVCG
Trigger: ACCACACACAGCTAACTGCCAAAATACATTGACCGT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCGCATCAAACAGTTCCTaGCACCTCTCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGASNSS*HLSSAL
Trigger: CAAAGCAGAAGAGAGGTGTCAGGAACTGTTTGATGC...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCTGTCGAACACACCACTaGAACATCCCCATGAGCGTG +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCCRTHH*NIPMSV
Trigger: CACGCTCATGGGGATGTTTCAGTGGTGTGTTCGACA...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTGGTGGTGGGCGTTTCTaGTATTCCCAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVGGGRF*YSQGAS
Trigger: AGAAGCACCTTGGGAATATCAGAAACGCCCACCACC...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGCATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp TCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTTGTGCAAAGTTTGTaGAGAGTTAACAAGGACGTA +
Preference number: 4 (lower is better)
Translates to: SAWFPDLLSQSDHHPPTAVVQSL*RVNKDV
Trigger: TACGTCCTTGTTAACTCTTCACAAACTTTGCACAAC...AGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCGTTGTGCAAAGTTTGTaGAGAGTTAACAAGGACGTA +
Preference number: 4 (lower is better)
Translates to: MIPRGTKGIAIQGITATAVVQSL*RVNKDV
Trigger: TACGTCCTTGTTAACTCTTCACAAACTTTGCACAAC...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp ATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCACACGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: IPRGTKGIAIQGITATATRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...TGTGGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGATTTTTCCTGAGAATTaGCCTGGCAAGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMIFPEN*PGKAHQ
Trigger: CTGGTGTGCCTTGCCAGGGCAATTCTCAGGAAAAAT...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTCAATGGTTAGCACGGTaGAGTGGGCAAATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFQWLAR*SGQISP
Trigger: GGGAGAAATTTGCCCACTGCACCGTGCTAACCATTG...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGELSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp TTCTCCTCTGATAGTGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCATTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: FSSDSVTGTFSVSWLSRALSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...TGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACACTATCAGAGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: CNSSPRCCERSSGSTEYIFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAFTRAF*PPLSVV
Trigger: AACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAA...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTATGGTCCAGAGCCCCTaGAGAGAAGATGATAAGTGG +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFMVQSP*REDDKW
Trigger: CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCAT...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCAAACATGGCACAGATaGCATCCAGACGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAQTWHR*HPDGRQ
Trigger: TTGCCGTCCGTCTGGATGCCATCTGTGCCATGTTTG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTGGGCCAGGCTGGTGGTaGGCGTTTCTGATATTCCCA +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGGPGWW*AFLIFP
Trigger: TGGGAATATCAGAAACGCCCACCACCAGCCTGGCCC...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CCA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAACGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACA +
Preference number: 4 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQRPAAG*ASPPGT
Trigger: TGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACG...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCGAGATCCCATCTCTaGATGAAATCTAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLARSHL*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGAGATGGGATCTCGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAAAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCAGAGCTGGAGATCCTTaGATAAGTTGGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTRAGDP*ISWEKY
Trigger: ATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCT...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTAGAGCTGGAGATCCTTaGATAAGTTGGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: SAWFPDLLSQSDHHPPTARAGDP*ISWEKY
Trigger: ATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCT...AGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCACGGCATTTAACTGGTaGCCTGCACCTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCTAFNW*PAPLIW
Trigger: CCAAATCAGAGGTGCAGGCCACCAGTTAAATGCCGT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAATGTCGAACACACCACTaGAACATCCCCATGAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQCRTHH*NIPMSV
Trigger: CACGCTCATGGGGATGTTTCAGTGGTGTGTTCGACA...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GCCGAGGAGCACGTAGGTGGTGAAGGTCACAAACACGATGATTTTGCTTGCACTAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: AEEHVGGEGHKHDDFACTKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...AGTGCAAGCAAAATCATCGTGTTTGTGACCTTCACCACCTACGTGCTCCTCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAACATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: DIPISIQSRAVTAIACSGEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATTTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCTCCTCCATTTACAGTaGCATTTAGCATACTTTGTT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLLHLQ*HLAYFV
Trigger: AACAAAGTATGCTAAATGTCACTGTAAATGGAGGAG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGTTGTGCAAAGTTTGTaGAGAGTTAACAAGGACGTA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLVVQSL*RVNKDV
Trigger: TACGTCCTTGTTAACTCTTCACAAACTTTGCACAAC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR TCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTGCCAACCTTTTCTTGTaGTTTAATGAGTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSANLFL*FNECCQ
Trigger: CTGACAGCACTCATTAAATCACAAGAAAAGGTTGGC...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATTCCTCATTGTTCCAGTaGACAAAACAGGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNSSLFQ*TKQVPE
Trigger: CTCAGGAACCTGTTTTGTTCACTGGAACAATGAGGA...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCCCTTCGGAACGGACTTaGCATTTTGGTTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLPSERT*HFGWIH
Trigger: GTGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGG...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp GACTATCTGGCCTGTGGTTGTCTTCCCCATGGCCATGTTACTAAGACGAAGTGCAACAACAAAAACCTGTaGCAACTTTGTCCTACTCCT +
Preference number: 4 (lower is better)
Translates to: DYLACGCLPHGHVTKTKCNNKNL*QLCPTP
Trigger: AGGAGTAGGACAAAGTTGTCACAGGTTTTTGTTGTT...GCACTTCGTCTTAGTAACATGGCCATGGGGAAGACAACCACAGGCCAGATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCAGTATTGTGGTTTGTTaGTTCATTCAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTSIVVC*FIQQKA
Trigger: GGCTTTCTGTTGAATGAATCAACAAACCACAATACT...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTTATTCTGAGAGGTCATaGGACTCCACTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSYSERS*DSTSNH
Trigger: ATGGTTTGAAGTGGAGTCTCATGACCTCTCAGAATA...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGGTGACACCTTATTCTaGGAGGTCATGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLGDTLF*EVMRLH
Trigger: GTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGGTGACACCTTATTCTaGGAGGTCATGAGACTCCAC +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRGDTLF*EVMRLH
Trigger: GTGGAGTCTCATGACCTCTCAGAATAAGGTGTCACC...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp TTCTCCTCTGATAGTGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCAGCAATTTCAGGGAGGTaGCACCTTATTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FSSDSVTGTFSVSWLSRAAISGR*HLILRG
Trigger: ACCTCTCAGAATAAGGTGTCACCTCCCTGAAATTGC...TGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACACTATCAGAGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATCTAAGTACTAGGAGTTaGACAGCTACTACGGTCAAT +
Preference number: 4 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNLSTRS*TATTVN
Trigger: ATTGACCGTAGTAGCTGTTCAACTCCTAGTACTTAG...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAAGTTCCTCATCCGTGTaGTCATTAAAGGGATCCAGG +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETSSSSV*SLKGSR
Trigger: CCTGGATCCCTTTAATGAGCACACGGATGAGGAACT...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCATTTTTCCTGAGAATTaGCCTGGCAAGGCACACCAG +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCIFPEN*PGKAHQ
Trigger: CTGGTGTGCCTTGCCAGGGCAATTCTCAGGAAAAAT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGCAGCGGCTTCTaGCTTGCCCAGTTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: CNLERISIQPKPKGLQSTEGSGF*LAQLLH
Trigger: GTGCAACAACTGGGCAAGGCAGAAGCCGCTGCCCTC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAACTGATATTCCCAAGGTaGTTCTTTTTCAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKLIFPR*FFFKVC
Trigger: ACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAG...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTACGGCAGCTGACGGTTaGGCTGTGATATCTCATCAA +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSTAADG*AVISHQ
Trigger: TTGATGAGATATCACAGCGCAACCGTCAGCTGCCGT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAAGGTTTACCCGTaGTTTCTGCCCTCCACTCAG +
Preference number: 4 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESCKVYP*FLPSTQ
Trigger: CTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCA...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGCTGAGGCAGGAGGACTaGTTGAACACAGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMLRQED*LNTGGG
Trigger: TCCACCTCCTGTGTTCAAGCAGTCCTCCTGCCTCAG...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642524.1
CDS-3UTR GCA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGGGCATCCAGAGTTTTTaGCAGAATCAGGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQGIQSF*QNQGPK
Trigger: TTTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCC...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGAAGTGCCAAACCAACCTaGCCGGCATCCAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LALKNEAKFIPLRQELLRSAKPT*PASRVF
Trigger: AAAAACTCTGGATGCCGGGCAGGTTGGTTTGGCACT...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp CTGGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTGAAGTATACCTGTTTTaGTGTTTCAGTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LVVGVSDIPKVLLFQGLCEVYLF*CFSEGS
Trigger: GCTGCCCTCACTGAAACAGCAAAACAGGTATACTTC...ACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGAAGTATACCTGTTTTaGTGTTTCAGTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVEVYLF*CFSEGS
Trigger: GCTGCCCTCACTGAAACAGCAAAACAGGTATACTTC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAACCGTGTCCAAGTCATaGAACTCTAAAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVTVSKS*NSKGGW
Trigger: CCATCCTCCTTTAGAGTTGCATGACTTGGACACGGT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTTCAATCTGTGTGCAATaGTTAGCACGGTGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSSICVQ*LARCSG
Trigger: CCCACTGCACCGTGCTAACCATTGCACACAGATTGA...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGAGAGAAGATGATAAGTaGGAAAACACTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLREDDK*ENTGLR
Trigger: TCGGAGTCCAGTGTTTTCCCACTTATCATCTTCTCT...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTATGGGGCCAGGCTGGTaGTGGGCGTTTCTGATATTC +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGMGPGW*WAFLIF
Trigger: GAATATCAGAAACGCCCACCACCAGCCTGGCCCCAT...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATTCATGGGGCCAGGCTaGTGGTGGGCGTTTCTGATA +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLFMGPG*WWAFLI
Trigger: TATCAGAAACGCCCACCACCAGCCTGGCCCCATGAA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TTTTATTATCCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCGACCAGCCCGTGACTTaGGGCCAATTCCCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: FYYPYTSYNFIHGPDPGIDQPVT*GQFPEH
Trigger: GTGCTCGGGGAATTGGCCCCAAGTCACGGGCTGGTC...GATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGGATAATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEYDSLV*EFLELE
Trigger: CTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTA...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGACATTCTCTGTATCTTaGCTCTCCAGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMTFSVS*LSRAPS
Trigger: AGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGT...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGACGGACTTGACATTTTaGTTGGATTCACAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLTDLTF*LDSQCC
Trigger: ACAGCACTGTGAATCCAACCAAAATGTCAAGTCCGT...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTAAACTCTAAAGGAGGATaGACGGTCACATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLNSKGG*TVTFVS
Trigger: GGACACAAATGTGACCGTCCATCCTCCTTTAGAGTT...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATGTCGGTTAGAGGTTTaGCCTTCTTGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVCRLEV*PSWEVS
Trigger: TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACA...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CAA 72 bp ACTGAGAGGATCGTCCAGGAGATAGATGTCAGCATCTaGATACACTGCTCTTGCAAGGTTTACCCGTGCTTT +
Preference number: 4 (lower is better)
Translates to: TERIVQEIDVSI*IHCSCKVYPCF
Trigger: AAAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAGATGCTGACATCTATCTCCTGGACGATCCTCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAAATGACCCTTTCTACTaGGATCATCATATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKNDPFY*DHHILN
Trigger: GTTGAGAATATGATGATCTCAGTAGAAAGGGTCATT...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTTCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGGTCTAGAAGATTGTTaGGACCAAACCGAAGACTCT +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFGLEDC*DQTEDS
Trigger: AGAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACC...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTCTGCAGCCTGAGGTATaGTTGACATCTTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFLQPEV*LTSSSL
Trigger: TAAGGAAGAAGATGTCAATCATACCTCAGGCTGCAG...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGCAATTTCAGGGAGGTaGCACCTTATTCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLAISGR*HLILRG
Trigger: ACCTCTCAGAATAAGGTGTCACCTCCCTGAAATTGC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAACTCTTCTGCTTTGTATaGCCGGATGGTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQLFCFV*PDGPEP
Trigger: GGGCTCTGGACCATCCGGGCATACAAAGCAGAAGAG...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCTGATATTCCCAAGGTaGTTCTTTTTCAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLLIFPR*FFFKVC
Trigger: ACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAG...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGAAGGAAGGTATCTaGAATTCAGAATACATAAAG +
Preference number: 4 (lower is better)
Translates to: STQRGSPISYHSQITILQQKEGI*NSEYIK
Trigger: CTTTATGTATTCTGAATTGCAGATACCTTCCTTCTG...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643556.1
CDS-3UTR GCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGGCATCCAGAGTTTTTaGCAGAATCAGGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLGIQSF*QNQGPK
Trigger: TTTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAAATGAGTGCTGTCAGATaGTTCAGTACCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQMSAVR*FSTRGP
Trigger: TGGGCCTCTGGTACTGAAGCATCTGACAGCACTCAT...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACGGTTCTTCCCACAATaGCAACCTTTTCTTGTGATT +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSRFFPQ*QPFLVI
Trigger: AATCACAAGAAAAGGTTGGCATTGTGGGAAGAACCG...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTAAAAACTAGTGGAAAATaGCTTCGGAACGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLKTSGK*LRNGLD
Trigger: GTCAAGTCCGTTCCGAAGGCATTTTCCACTAGTTTT...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCACCGTGTCCAAGTCATaGAACTCTAAAGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCTVSKS*NSKGGW
Trigger: CCATCCTCCTTTAGAGTTGCATGACTTGGACACGGT...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGATCCTGAGAACGTACTaGATAATTATAGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: SALYARMVQSPWREDDKWILRTY*IIIVNA
Trigger: AGCATTGACTATAATTATGCAGTACGTTCTCAGGAT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAAATTATCACTCCTTCATaGGGCCAGGCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQIITPS*GQAGGG
Trigger: CCCACCACCAGCCTGGCCCCATGAAGGAGTGATAAT...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTTACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLYDSLV*EFLELE
Trigger: CTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTA...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCTACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCYDSLV*EFLELE
Trigger: CTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTA...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAACCTGGATTATCCAAGTaGGTCCTAAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEPGLSK*VLNPMA
Trigger: TGCCATTGGATTTAGGACCCACTTGGATAATCCAGG...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACACCTGGATTATCCAAGTaGGTCCTAAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETPGLSK*VLNPMA
Trigger: TGCCATTGGATTTAGGACCCACTTGGATAATCCAGG...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAACGGACTTGACATTTTaGTTGGATTCACAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSTDLTF*LDSQCC
Trigger: ACAGCACTGTGAATCCAACCAAAATGTCAAGTCCGT...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCAACTCTAAAGGAGGATaGACGGTCACATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCNSKGG*TVTFVS
Trigger: GGACACAAATGTGACCGTCCATCCTCCTTTAGAGTT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGTGTCGGTTAGAGGTTTaGCCTTCTTGGGAAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRCRLEV*PSWEVS
Trigger: TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACA...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATGAAAATGAACCCCTaGATGCATCCTGAGAACGTA +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVMKMNP*MHPENV
Trigger: TACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAACGGTCAATGTATTTTaGCAGTTAGCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSTVNVF*QLAVCG
Trigger: ACCACACACAGCTAACTGCCAAAATACATTGACCGT...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp TGTAAGGCATTCCACAGTTCCTCATCCGTGTGCTCATTAAAGGGATCCAGGTTTGGTCTGTGTATTCAATaGCCCTTTCTACTGAGATCA +
Preference number: 4 (lower is better)
Translates to: CKAFHSSSSVCSLKGSRFGLCIQ*PFLLRS
Trigger: TGATCTCAGTAGAAAGGGTCATTGAATACACAGACC...AAACCTGGATCCCTTTAATGAGCACACGGATGAGGAACTGTGGAATGCCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGGTCTGTGTATTCAATaGCCCTTTCTACTGAGATCA +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFGLCIQ*PFLLRS
Trigger: TGATCTCAGTAGAAAGGGTCATTGAATACACAGACC...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTCATTGGACAGCAGATTaGCTATCTGGCCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGHWTAD*LSGLWL
Trigger: CAACCACAGGCCAGATAGTCAATCTGCTGTCCAATG...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTAAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAAGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTCCATCTGACGGCAGCTaGCGGTTGCGCTGTGATATC +
Preference number: 4 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSPSDGS*RLRCDI
Trigger: GATATCACAGCGCAACCGTCAGCTGCCGTCAGATGG...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCCGCATCTACTGCACTaGGAGGATCGTCCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVPHLLH*EDRPGD
Trigger: ATCTCCTGGACGATCCTCTCAGTGCAGTAGATGCGG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAATTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCTCCTCCATTTACAGTaGCATTTAGCATACTTTGTT +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLLLHLQ*HLAYFV
Trigger: AACAAAGTATGCTAAATGTCACTGTAAATGGAGGAG...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACACAATCTAAAAAGGGCTaGGATGAGGGAACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETQSKKG*DEGTFS
Trigger: GGAAAAAGTTCCCTCATCTCAGCCCTTTTTAGATTG...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCTCCTCATTGTTCCAGTaGACAAAACAGGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCSSLFQ*TKQVPE
Trigger: CTCAGGAACCTGTTTTGTTCACTGGAACAATGAGGA...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAAAGGTGGAGGTTGAAGTaGGCCAAGATAGCACCACTG +
Preference number: 4 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQRWRLK*AKIAPL
Trigger: CAGTGGTGCTATCTTGGCTCACTTCAACCTCCACCT...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAAGTATTGTGGTTTGTTaGTTCATTCAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTSIVVC*FIQQKA
Trigger: GGCTTTCTGTTGAATGAATCAACAAACCACAATACT...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTATTCTGAGAGGTCATaGGACTCCACTTCAAACCAT +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCYSERS*DSTSNH
Trigger: ATGGTTTGAAGTGGAGTCTCATGACCTCTCAGAATA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAACTAAGTACTAGGAGTTaGACAGCTACTACGGTCAAT +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTELSTRS*TATTVN
Trigger: ATTGACCGTAGTAGCTGTTCAACTCCTAGTACTTAG...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTATGTGGTTTGTTGGACTaGACATTAACCATACGTGTA +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLCGLLD*TLTIRV
Trigger: TACACGTATGGTTAATGTTCAGTCCAACAAACCACA...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCCCTCATTATGATCACTaGTGCAATTTCAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVPHYDH*CNFSHL
Trigger: TAGGTGACTGAAATTGCATCAGTGATCATAATGAGG...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCCTGATATTCCCAAGGTaGTTCTTTTTCAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVLIFPR*FFFKVC
Trigger: ACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAG...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR GCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCAGAAGGAAGGTATCTaGAATTCAGAATACATAAAG +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLQKEGI*NSEYIK
Trigger: CTTTATGTATTCTGAATTGCAGATACCTTCCTTCTG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000643556.1
CDS-3UTR GCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTACGGTTCTTCCCACAATaGCAACCTTTTCTTGTGATT +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVRFFPQ*QPFLVI
Trigger: AATCACAAGAAAAGGTTGGCATTGTGGGAAGAACCG...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTAAAACTAGTGGAAAATaGCTTCGGAACGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFKTSGK*LRNGLD
Trigger: GTCAAGTCCGTTCCGAAGGCATTTTCCACTAGTTTT...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAAGAGAAGATGATAAGTaGGAAAACACTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVREDDK*ENTGLR
Trigger: TCGGAGTCCAGTGTTTTCCCACTTATCATCTTCTCT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTAGAGAAGATGATAAGTaGGAAAACACTGGACTCCGA +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFREDDK*ENTGLR
Trigger: TCGGAGTCCAGTGTTTTCCCACTTATCATCTTCTCT...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATCTGAATGTAAATCCTaGTGTGCATCAAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSSECKS*CASNSS
Trigger: GGAACTGTTTGATGCACACCAGGATTTACATTCAGA...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAATTATCACTCCTTCATaGGGCCAGGCTGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CNLERISIQPKPKGLQSTIITPS*GQAGGG
Trigger: CCCACCACCAGCCTGGCCCCATGAAGGAGTGATAAT...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLASSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAAGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCA +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNALHSA*FPDLLS
Trigger: TGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGC...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTACATTCTCTGTATCTTaGCTCTCCAGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLTFSVS*LSRAPS
Trigger: AGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGT...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACATTCTCTGTATCTTaGCTCTCCAGAGCACCATCT +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVTFSVS*LSRAPS
Trigger: AGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: YSSVMRTTSQNSFARAGEWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGCCTGGATTATCCAAGTaGGTCCTAAATCCAATGGCA +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRPGLSK*VLNPMA
Trigger: TGCCATTGGATTTAGGACCCACTTGGATAATCCAGG...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCAGAGCTGGAGATCCTTaGATAAGTTGGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGRAGDP*ISWEKY
Trigger: ATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCT...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTACGGCATTTAACTGGTaGCCTGCACCTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGTAFNW*PAPLIW
Trigger: CCAAATCAGAGGTGCAGGCCACCAGTTAAATGCCGT...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGAACTCTAAAGGAGGATaGACGGTCACATTTGTGTCC +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRNSKGG*TVTFVS
Trigger: GGACACAAATGTGACCGTCCATCCTCCTTTAGAGTT...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGATGAAAATGAACCCCTaGATGCATCCTGAGAACGTA +
Preference number: 4 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQMKMNP*MHPENV
Trigger: TACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCATGAAAATGAACCCCTaGATGCATCCTGAGAACGTA +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLMKMNP*MHPENV
Trigger: TACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGTCCCAGGAAGTATTGTaGTTTGTTGATTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLSQEVL*FVDSFN
Trigger: GTTGAATGAATCAACAAACCACAATACTTCCTGGGA...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAACGGTCAATGTATTTTaGCAGTTAGCTGTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVTVNVF*QLAVCG
Trigger: ACCACACACAGCTAACTGCCAAAATACATTGACCGT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CAA 72 bp CGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTaGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAA +
Preference number: 4 (lower is better)
Translates to: RISGMSVRGLAF*GSVTMLSLKLQ
Trigger: TTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
3UTR CAA 72 bp ATAATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTaGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: IMPRISGMSVRG*AFLGSVTMLSL
Trigger: TAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAAGGATTCTTCGGATGCTaGCGATTGCCTCTGACACCC +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKGFFGC*RLPLTP
Trigger: GGGTGTCAGAGGCAATCGTCAGCATCCGAAGAATCC...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAAAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATCTCCTCCATTTACAGTaGCATTTAGCATACTTTGTT +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNLLHLQ*HLAYFV
Trigger: AACAAAGTATGCTAAATGTCACTGTAAATGGAGGAG...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTTGTGCAAAGTTTGTaGAGAGTTAACAAGGACGTA +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFVVQSL*RVNKDV
Trigger: TACGTCCTTGTTAACTCTTCACAAACTTTGCACAAC...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAAACAAAACAGGTTCCTaGGGTATGATTGACATCTTC +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVNKTGS*GMIDIF
Trigger: GAAGATGTCAATCATACCTCAGGAACCTGTTTTGTT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCAACAACAAAAACCTGTaGCAACTTTGTCCTACTCCT +
Preference number: 4 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCNNKNL*QLCPTP
Trigger: AGGAGTAGGACAAAGTTGTCACAGGTTTTTGTTGTT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTCTAAGTACTAGGAGTTaGACAGCTACTACGGTCAAT +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSLSTRS*TATTVN
Trigger: ATTGACCGTAGTAGCTGTTCAACTCCTAGTACTTAG...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTAGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGGGCATCCAGAGTTTTTaGCAGAATCAGGGACCCAAA +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMGIQSF*QNQGPK
Trigger: TTTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCC...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAAAGTGCCAAACCAACCTaGCCGGCATCCAGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQSAKPT*PASRVF
Trigger: AAAAACTCTGGATGCCGGGCAGGTTGGTTTGGCACT...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTGAAGTATACCTGTTTTaGTGTTTCAGTGAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESEVYLF*CFSEGS
Trigger: GCTGCCCTCACTGAAACAGCAAAACAGGTATACTTC...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp TTCTCCTCTGATAGTGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCATCTGAATGTAAATCCTaGTGTGCATCAAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: FSSDSVTGTFSVSWLSRASECKS*CASNSS
Trigger: GGAACTGTTTGATGCACACCAGGATTTACATTCAGA...TGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACACTATCAGAGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATATETTPTTCSNVWMKSSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACGCATCAAACAGTTCCTaGCACCTCTCTTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYASNSS*HLSSAL
Trigger: CAAAGCAGAAGAGAGGTGTCAGGAACTGTTTGATGC...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACGGTGGTGGGCGTTTCTaGTATTCCCAAGGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNGGGRF*YSQGAS
Trigger: AGAAGCACCTTGGGAATATCAGAAACGCCCACCACC...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCAAGAACACTGTCACCTaGTCAAACTTGTTCACATCA +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLAKNTVT*SNLFTS
Trigger: TGATGTGAACAAGTTTGATCAGGTGACAGTGTTCTT...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TTTTATTATCCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCATCTTTTTACCATCTaGCGGCAGCTGACGGTTGCG +
Preference number: 4 (lower is better)
Translates to: FYYPYTSYNFIHGPDPGIHLFTI*RQLTVA
Trigger: CGCAACCGTCAGCTGCCGTCAGATGGTAAAAAGATG...GATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGGATAATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTTGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: GFQYSPNQKAYSQQRVSLEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...AAGGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCCTCCTCCATTTACAGTaGCATTTAGCATACTTTGTT +
Preference number: 4 (lower is better)
Translates to: TSFMVLILASVKVAVLLLLLHLQ*HLAYFV
Trigger: AACAAAGTATGCTAAATGTCACTGTAAATGGAGGAG...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAACAACAAAAACCTGTaGCAACTTTGTCCTACTCCT +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVNNKNL*QLCPTP
Trigger: AGGAGTAGGACAAAGTTGTCACAGGTTTTTGTTGTT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCTGTGGTTTGTTGGACTaGACATTAACCATACGTGTA +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCCGLLD*TLTIRV
Trigger: TACACGTATGGTTAATGTTCAGTCCAACAAACCACA...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTCCTCATTATGATCACTaGTGCAATTTCAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVPHYDH*CNFSHL
Trigger: TAGGTGACTGAAATTGCATCAGTGATCATAATGAGG...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCTCTTGGATCCACATTTaGCGTCGCTTCATCAATAAT +
Preference number: 4 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLASWIHI*RRFINN
Trigger: ATTATTGATGAAGCGACGGCAAATGTGGATCCAAGA...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGTCTTGGATCCACATTTaGCGTCGCTTCATCAATAAT +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRSWIHI*RRFINN
Trigger: ATTATTGATGAAGCGACGGCAAATGTGGATCCAAGA...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAGGCTCTCTTTATTTTaGAGCAAAACATACGGCTCA +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVRLSLF*SKTYGS
Trigger: TGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTAGGCTCTCTTTATTTTaGAGCAAAACATACGGCTCA +
Preference number: 4 (lower is better)
Translates to: HNAESKTATVTVSKSCNSRLSLF*SKTYGS
Trigger: TGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCTTATCCCAGAACCCTTaGAACTCCTCTCCAAGGTGC +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVLSQNP*NSSPRC
Trigger: GCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCAACTTCCGCATCTACTaGACTGAGAGGATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVNFRIY*TERIVQ
Trigger: CTGGACGATCCTCTCAGTGCAGTAGATGCGGAAGTT...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAATGAGTGCTGTCAGATaGTTCAGTACCAGAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CNLERISIQPKPKGLQSTMSAVR*FSTRGP
Trigger: TGGGCCTCTGGTACTGAAGCATCTGACAGCACTCAT...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAGCAGAGCCTATTCATaGAATTTAGAAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVSRAYS*NLERIS
Trigger: TGAAATCCTTTCTAAATTGCATGAATAGGCTCTGCT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCTCTGAATGTAAATCCTaGTGTGCATCAAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: KCHNAESKTATVTVSKSCSECKS*CASNSS
Trigger: GGAACTGTTTGATGCACACCAGGATTTACATTCAGA...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTCCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAATTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGGTGAAGACATCATCCTaGATTATCCAAGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMVKTSS*IIQVGP
Trigger: AGGACCCACTTGGATAATCCAGGATGATGTCTTCAC...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACTTGTAGCAATGTCTaGATGAAATCTAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVTCSNV*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGACATTGCTACAAGT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATACTTGTAGCAATGTCTaGATGAAATCTAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNTCSNV*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGACATTGCTACAAGT...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCTACCAGAGGCCCACCTaGACTGTACATGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVYQRPT*TVHEVH
Trigger: GTGAACTTCATGTACAGTCCAGGTGGGCCTCTGGTA...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTTCCCAGGAAGTATTGTaGTTTGTTGATTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFSQEVL*FVDSFN
Trigger: GTTGAATGAATCAACAAACCACAATACTTCCTGGGA...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAATGACCCTTTCTACTaGGATCATCATATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVNDPFY*DHHILN
Trigger: GTTGAGAATATGATGATCTCAGTAGAAAGGGTCATT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATTTGTTTGCCCAGTATaGAAGCCACCAATCTTGAAG +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLFVCPV*KPPILK
Trigger: CTTCAAGATTGGTGGCTTTCATACTGGGCAAACAAA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGCTCCTCCATTTACAGTaGCATTTAGCATACTTTGTT +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRLLHLQ*HLAYFV
Trigger: AACAAAGTATGCTAAATGTCACTGTAAATGGAGGAG...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTCAATCTAAAAAGGGCTaGGATGAGGGAACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGQSKKG*DEGTFS
Trigger: GGAAAAAGTTCCCTCATCTCAGCCCTTTTTAGATTG...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCCTTCGGAACGGACTTaGCATTTTGGTTGGATTCAC +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVPSERT*HFGWIH
Trigger: GTGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTAGGCTCTCTTTATTTTaGAGCAAAACATACGGCTCA +
Preference number: 4 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESRLSLF*SKTYGS
Trigger: TGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCT...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR GCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGTTCCCAAAACAGCTTTaGAAGGGCAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMFPKQL*KGRRMI
Trigger: AATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAA...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAATCCTGAGAACGTACTaGATAATTATAGTCAATGCT +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVILRTY*IIIVNA
Trigger: AGCATTGACTATAATTATGCAGTACGTTCTCAGGAT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TGTAACTGGGACATTCTCTGTATCTTGGCTCTCCAGAGCACCATCTTTCAAGGATCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: CNWDILCILALQSTIFQGSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...TCCTTGAAAGATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTCCCAGTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACATCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETSNLRL*PILNKG
Trigger: TCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGTTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTAAAAAGTCAGCACCGTaGCATAGGCGTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSKKSAP*HRRTLC
Trigger: ACACAGCGTACGCCTATGCCACGGTGCTGACTTTTT...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAAAATCATATGGCACATaGCTACTCGTAACCTCATCC +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLKSYGT*LLVTSS
Trigger: GGATGAGGTTACGAGTAGCCATGTGCCATATGATTT...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAACTTGTAGCAATGTCTaGATGAAATCTAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVTCSNV*MKSKNV
Trigger: GACGTTTTTAGATTTCATCCAGACATTGCTACAAGT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGGAGCACAAGCCTTTATaGCTTTTTCATATCGTTCCT +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMEHKPL*LFHIVP
Trigger: AGGAACGATATGAAAAAGTCATAAAGGCTTGTGCTC...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAATCTGACTTGCAGCTTTaGGGTACTGCAACTGATGAG +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKSDLQL*GTATDE
Trigger: CTCATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGA...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAAGTGAGCACCAGCTCTaGAGTAATTCTTATAGGCCT +
Preference number: 4 (lower is better)
Translates to: CNLERISIQPKPKGLQSTSEHQL*SNSYRP
Trigger: AGGCCTATAAGAATTACTTCAGAGCTGGTGCTCACT...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGTTGTGCAAAGTTTGTaGAGAGTTAACAAGGACGTA +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLVVQSL*RVNKDV
Trigger: TACGTCCTTGTTAACTCTTCACAAACTTTGCACAAC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGCGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTACGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RFGLLGKCHNAESKTATVKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVSSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAATACGATTCCTTAGTGTaGGAGTTCCTGGAACTGGAG +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKYDSLV*EFLELE
Trigger: CTCCAGTTCCAGGAACTCCCACACTAAGGAATCGTA...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAATCCCAGGAAGTATTGTaGTTTGTTGATTCATTCAAC +
Preference number: 4 (lower is better)
Translates to: LLAALNTYHLPLISVYGQSQEVL*FVDSFN
Trigger: GTTGAATGAATCAACAAACCACAATACTTCCTGGGA...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
3UTR CAA 72 bp GAGCCACCTGTGAGTATTACCTTTCCTGGTAAAGAATaGAATGTTATTTGGGAAAAGGGTATTTGCACATGG +
Preference number: 4 (lower is better)
Translates to: EPPVSITFPGKE*NVIWEKGICTW
Trigger: CCATGTGCAAATACCCTTTTCCCAAATAACATTCAATTCTTTACCAGGAAAGGTAATACTCACAGGTGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR TCA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTAATGACCCTTTCTACTaGGATCATCATATTCTCAAC +
Preference number: 4 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGNDPFY*DHHILN
Trigger: GTTGAGAATATGATGATCTCAGTAGAAAGGGTCATT...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACGTCTTCTGGCAGCACTaGATACATATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNVFWQH*IHIIFL
Trigger: GAGGAAGATGATATGTATTCAGTGCTGCCAGAAGAC...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCGCTTGCACTGAAAAATaGAGCCAAATTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVACTEK*SQIHPS
Trigger: AGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAGC...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACCGGAGCTTTCAGAATTaGCTCAAACATTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYRSFQN*LKHFVV
Trigger: CACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCG...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCGTAGCAATGTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVVAMSG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGACATTGCTAC...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCGCCAACCTTTTCTTGTaGTTTAATGAGTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVANLFL*FNECCQ
Trigger: CTGACAGCACTCATTAAATCACAAGAAAAGGTTGGC...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACTGTGGTTTGTTGGACTaGACATTAACCATACGTGTA +
Preference number: 4 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYCGLLD*TLTIRV
Trigger: TACACGTATGGTTAATGTTCAGTCCAACAAACCACA...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp TTTTATTATCCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCAGTAGCAAAAAGGTCTaGATTCTTCGGATGCTGACG +
Preference number: 4 (lower is better)
Translates to: FYYPYTSYNFIHGPDPGISSKKV*ILRMLT
Trigger: CGTCAGCATCCGAAGAATCCAGACCTTTTTGCTACT...GATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGGATAATAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCCCAAAAATATGGGCTaGATTACTTTGGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVPKNMG*ITLALS
Trigger: GGAAAGTGCCAAAGTAATCCAGCCCATATTTTTGGG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATTTTTCCCAAAAATATaGGCTGGATTACTTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLFFPKI*AGLLWH
Trigger: GTGCCAAAGTAATCCAGCCCATATTTTTGGGAAAAA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAAGTGAAGACATCATCCTaGATTATCCAAGTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKVKTSS*IIQVGP
Trigger: AGGACCCACTTGGATAATCCAGGATGATGTCTTCAC...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
3UTR CAA 72 bp GTCAGCGGCAGCAAATCATCCAAGTGTCCAATGTCTTaGGAGAAACGATTTAAAATTCTTCCTATTGGATTT +
Preference number: 4 (lower is better)
Translates to: VSGSKSSKCPMS*EKRFKILPIGF
Trigger: AAATCCAATAGGAAGAATTTTAAATCGTTTCTCCAAAGACATTGGACACTTGGATGATTTGCTGCCGCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR TCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATGTAGCAATGTCTGGATaGAATCTAAAAACGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNVAMSG*NLKTSA
Trigger: CGCTGACGTTTTTAGATTTCATCCAGACATTGCTAC...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATCAATCTAAAAAGGGCTaGGATGAGGGAACTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNQSKKG*DEGTFS
Trigger: GGAAAAAGTTCCCTCATCTCAGCCCTTTTTAGATTG...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATCAGGTTCCTGAGGTATaGTTGACATCTTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNQVPEV*LTSSSL
Trigger: TAAGGAAGAAGATGTCAATCATACCTCAGGAACCTG...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCCTCATTATGATCACTaGTGCAATTTCAGTCACCTA +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVPHYDH*CNFSHL
Trigger: TAGGTGACTGAAATTGCATCAGTGATCATAATGAGG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTAAAACTAGTGGAAAATaGCTTCGGAACGGACTTGAC +
Preference number: 4 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSKTSGK*LRNGLD
Trigger: GTCAAGTCCGTTCCGAAGGCATTTTCCACTAGTTTT...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAAGCAGAGCCTATTCATaGAATTTAGAAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLSRAYS*NLERIS
Trigger: TGAAATCCTTTCTAAATTGCATGAATAGGCTCTGCT...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATTGGGCTGGATTACTTTaGCACTTTCCTCAATTAACG +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNWAGLL*HFPQLT
Trigger: CGTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCA...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR TCA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACTCCTCATTGTTCCAGTaGACAAAACAGGTTCATAAG +
Preference number: 4 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNSSLFQ*TKQVHK
Trigger: CTTATGAACCTGTTTTGTTCACTGGAACAATGAGGA...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR TCA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCAGTATTGTGGTTTGTTaGTTCATTCAACAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVSIVVC*FIQQKA
Trigger: GGCTTTCTGTTGAATGAATCAACAAACCACAATACT...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATTCTTGGATCCACATTTaGCGTCGCTTCATCAATAAT +
Preference number: 4 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNSWIHI*RRFINN
Trigger: ATTATTGATGAAGCGACGGCAAATGTGGATCCAAGA...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: CNLERISIQPKPKGLQSTVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACAGCAGAGCCTATTCATaGAATTTAGAAAGGATTTCA +
Preference number: 4 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYSRAYS*NLERIS
Trigger: TGAAATCCTTTCTAAATTGCATGAATAGGCTCTGCT...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR GCA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTGTAAAATCCTGCACATaGACCATCTTTTTACCATCT +
Preference number: 4 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSVKSCT*TIFLPS
Trigger: AGATGGTAAAAAGATGGTGCATGTGCAGGATTTTAC...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
3UTR CAA 72 bp AATAATACCGGAGCTTTCAGAATTGACTCAAACATTTaGTTGTGCAAAGTTTGTGAAGAGTTAACAAGGACG +
Preference number: 4 (lower is better)
Translates to: NNTGAFRIDSNI*LCKVCEELTRT
Trigger: CGTCCTTGTTAACTCTTCACAAACTTTGCACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGGTATTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
3UTR CAA 72 bp ATAGTTCAAATAAAGTACAAAAGGTCCCAGGAAGTATaGTGGTTTGTTGATTCATTCAACAGAAAGCCCAAA +
Preference number: 4 (lower is better)
Translates to: IVQIKYKRSQEV*WFVDSFNRKPK
Trigger: TTTGGGCTTTCTGTTGAATGAATCAACAAACCACAATACTTCCTGGGACCTTTTGTACTTTATTTGAACTAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR GCA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAAAAAGCAGTAAAATCCTaGACATGCACCATCTTTTTA +
Preference number: 4 (lower is better)
Translates to: STSLYDFFISFLFVFLPKKAVKS*TCTIFL
Trigger: TAAAAAGATGGTGCATGTGCAGGATTTTACTGCTTT...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
34% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS TCA 90 bp GGGCAGCATCTTGCCGGGCGGGGCGGGCGCGGGCCGGGGTCGCGCTaGTCAGGCGGCGGTGGCCGCGGGCTCCGCTCCTGGACCTCAAGC +
Preference number: 5 (lower is better)
Translates to: GQHLAGRGGRGPGSR*SGGGGRGLRSWTSS
Trigger: GCTTGAGGTCCAGGAGCGGAGCCCGCGGCCACCGCCGCCTGATCAGCGCGACCCCGGCCCGCGCCCGCCCCGCCCGGCAAGATGCTGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000643816.1
ENST00000643842.1
ENST00000644471.1
ENST00000645237.2
CDS GCA 90 bp CCTGCAGCGGGTTGGGCTTCACCTCCTGGTACACGGGCAGCATCTTaGCGGGCGGGGCGGGCGCGGGCCGGGGTCGCGCTGATCAGGCGG +
Preference number: 5 (lower is better)
Translates to: PAAGWASPPGTRAAS*RAGRARAGVALIRR
Trigger: CCGCCTGATCAGCGCGACCCCGGCCCGCGCCCGCCCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000643816.1
ENST00000643842.1
ENST00000644471.1
ENST00000645237.2
CDS CCA 90 bp ACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACACGGGCAGCATCTTGCCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: TRRTRVSRGSRPAAG*ASPPGTRAASCRAG
Trigger: CCCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000643816.1
ENST00000643842.1
ENST00000644471.1
ENST00000645237.2
CDS GCA 90 bp GGCGGGGGAGACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGCAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: GGGDQKNTREQRFAS*SGLGFTSWYTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTCTCCCCCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643816.1
ENST00000643842.1
CDS CCA 90 bp ATCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTTaGGCTTCACCTCCTGGTACACGGGCAGCATCTTGCCGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: IRRTRVSRGSRPAAG*ASPPGTRAASCRAG
Trigger: CCCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000645532.1
CDS GCA 90 bp GGATTGAGCCACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGCAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: GLSHQKNTREQRFAS*SGLGFTSWYTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTGGCTCAATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000644471.1
ENST00000645237.2
ENST00000646439.1
CDS GCA 90 bp GCGAGACTCCATCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGCAGCATCTTG +
Preference number: 5 (lower is better)
Translates to: ARLHQKNTREQRFAS*SGLGFTSWYTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGATGGAGTCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000645532.1
CDS-3UTR CAA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAAGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: STQRGSPISYHSQITILQASCSG*GFTSWY
Trigger: GTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGC...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GGGCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGAGCACTGAGGTTTGCTaGAGGAGGGAGGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: GPIPRARHLTVMTSLLPRSTEVC*RREEDC
Trigger: GCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCT...CCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLASCSG*GFTSWY
Trigger: GTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CAA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: DIPISIQSRAVTAIACSGASCSG*GFTSWY
Trigger: GTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGC...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000643842.1
CDS TCA 90 bp CAGGATGTGGGGCTGGGCCCTGAGGTGCCTGCCAACAAGCTCATCTaGCCAGGGAGGTTAAGCCAGAAAAAGCAGCAGATCCTGTCCTTT +
Preference number: 5 (lower is better)
Translates to: QDVGLGPEVPANKLI*PGRLSQKKQQILSF
Trigger: AAAGGACAGGATCTGCTGCTTTTTCTGGCTTAACCTCCCTGGTCAGATGAGCTTGTTGGCAGGCACCTCAGGGCCCAGCCCCACATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643816.1
CDS-3UTR CAA 90 bp ACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: TLATPLQGAVSGLLAALNLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...ATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCAATTCCCCGAGCACGGCACTTAACAGTGATGACTTCCCTGCTCCCACGGGGTCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: ANSPSTALNSDDFPAPTGSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...CCCCGTGGGAGCAGGGAAGTCATCACTGTTAAGTGCCGTGCTCGGGGAATTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 5 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTGCAGCGGCTTCTGCCTaGCCCAGTTGTTGCACCATC +
Preference number: 5 (lower is better)
Translates to: ATATETTPTTCSNVWMKSAAASA*PSCCTI
Trigger: GATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTGC...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAGCACTGAGGTTTGCTaGAGGAGGGAGGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSTEVC*RREEDC
Trigger: GCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCCGGCATCCAGAGTTTTaGCCAGAATCAGGGACCCAA +
Preference number: 5 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGRHPEF*PESGTQ
Trigger: TTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCCG...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGTACGGTCAATGTATTTaGGCAGTTAGCTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTYGQCI*AVSCVW
Trigger: CCACACACAGCTAACTGCCAAAATACATTGACCGTA...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAGCAGCGGCTTCTGCCTaGCCCAGTTGTTGCACCATC +
Preference number: 5 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSAAASA*PSCCTI
Trigger: GATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTGC...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CACTGCCACGAACACGCGGCTGGCTGTGATCACACTGCCGAGGAGCACGTAGGTATACCAATAGAGATCTaGCTATGCCAAAAAGAACGG +
Preference number: 5 (lower is better)
Translates to: HCHEHAAGCDHTAEEHVGIPIEI*LCQKER
Trigger: CCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTAT...ACCTACGTGCTCCTCGGCAGTGTGATCACAGCCAGCCGCGTGTTCGTGGCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGCGGCTGGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: VTVSRTAPYSVTATNTRLDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...CAGCCGCGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCACTGAGGTTTGCTaGAGGAGGGAGGAGGATTGC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLSTEVC*RREEDC
Trigger: GCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGCGGCATCCAGAGTTTTaGCCAGAATCAGGGACCCAA +
Preference number: 5 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMRHPEF*PESGTQ
Trigger: TTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCCG...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CACATAGGCAATTCTTCCATGCACGCTGACCAGCCCGTGACTTGGGGCCAATTCGTCGAGGGCTGTCCATaGGAAGTGTTTGTAACCATG +
Preference number: 5 (lower is better)
Translates to: HIGNSSMHADQPVTWGQFVEGCP*EVFVTM
Trigger: CATGGTTACAAACACTTCCAATGGACAGCCCTCGAC...GAATTGGCCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAATTGCCTATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS CCA 90 bp ATACACTTGCAAGGTTTACCCGTGCTTTCTGCCCTCCACTCAGCGTaGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACA +
Preference number: 5 (lower is better)
Translates to: IHLQGLPVLSALHSA*FPDLLSQSDHHPPT
Trigger: TGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCAAGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS-3UTR CAA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACACACCTCTCTTCTGCTTaGTATGCCCGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTHLSSA*YARMVQ
Trigger: CTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTG...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TTATCCCAGAACCCTTGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: LSQNPCNSSPRCCERSSGLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...GCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AAGAGGGTAACCGTCAGCCGCACAGCCCCATACAGCGTCACTGCCACGAACACGATACCAATAGAGATCTaGCTATGCCAAAAAGAACGG +
Preference number: 5 (lower is better)
Translates to: KRVTVSRTAPYSVTATNTIPIEI*LCQKER
Trigger: CCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTAT...CGTGTTCGTGGCAGTGACGCTGTATGGGGCTGTGCGGCTGACGGTTACCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTTGAGCCTAGGAGTTaGAGACCAGCCAGGACAACA +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLEPRS*RPARTT
Trigger: TGTTGTCCTGGCTGGTCTCAAACTCCTAGGCTCAAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGTCGAGGGCTGTCCATaGGAAGTGTTTGTAACCATG +
Preference number: 5 (lower is better)
Translates to: SALYARMVQSPWREDDKWVEGCP*EVFVTM
Trigger: CATGGTTACAAACACTTCCAATGGACAGCCCTCGAC...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS GCA 90 bp AGATGTCAGCATCTTGATACACTTGCAAGGTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGA +
Preference number: 5 (lower is better)
Translates to: RCQHLDTLARFTRAF*PPLSVVPRSPITVR
Trigger: TCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCAAGTGTATCAAGATGCTGACATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS-3UTR CAA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGASCSG*GFTSWY
Trigger: GTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGC...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TCCACTCAGCGTGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: STQRGSPISYHSQITILQLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...TTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCACGCTGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCCTTGATACACTGCTCTaGCAAGGTTTACCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTLDTLL*QGLPVL
Trigger: AAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAG...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CACATAGGCAATTCTTCCATGCACGCTGACCAGCCCGTGACTTGGGGCCAATTCGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: HIGNSSMHADQPVTWGQFAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...GAATTGGCCCCAAGTCACGGGCTGGTCAGCGTGCATGGAAGAATTGCCTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCGGGGAACCAAGGGTATaGCGATCCAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGGEPRV*RSKESR
Trigger: CCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCC...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCGCCTTCGGAACGGACTaGACATTTTGGTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: MIPRGTKGIAIQGITATAAFGTD*TFWLDS
Trigger: TGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGGC...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCCACCTCTCTTCTGCTTaGTATGCCCGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCHLSSA*YARMVQ
Trigger: CTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTG...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GATATTCCTATCTCCATCCAGAGTAGGGCAGTCACTGCAATCGCCTGCAGTGGTCAAACCAGCGGGACGTaGTCAAAAACAAGAACCAAG +
Preference number: 5 (lower is better)
Translates to: DIPISIQSRAVTAIACSGQTSGT*SKTRTK
Trigger: CTTGGTTCTTGTTTTTGACAACGTCCCGCTGGTTTG...ACCACTGCAGGCGATTGCAGTGACTGCCCTACTCTGGATGGAGATAGGAATATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTACTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAATCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCTTGATACACTGCTCTaGCAAGGTTTACCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLLDTLL*QGLPVL
Trigger: AAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GACTATCTGGCCTGTGGTTGTCTTCCCCATGGCCATGTTACTAAGACGAAGTGCCTTGATACACTGCTCTaGCAAGGTTTACCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: DYLACGCLPHGHVTKTKCLDTLL*QGLPVL
Trigger: AAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAG...GCACTTCGTCTTAGTAACATGGCCATGGGGAAGACAACCACAGGCCAGATAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGATGTCGGTTAGAGGTTaGGCCTTCTTGGGAAGTGTC +
Preference number: 5 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLMSVRG*AFLGSV
Trigger: GACACTTCCCAAGAAGGCCAAACCTCTAACCGACAT...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGCACACCAGTTGTCTTaGTCCAACACTAAAATTGGA +
Preference number: 5 (lower is better)
Translates to: SALYARMVQSPWREDDKWAHQLS*SNTKIG
Trigger: TCCAATTTTAGTGTTGGACAAAGACAACTGGTGTGC...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCAGCGGCTTCTGCCTaGCCCAGTTGTTGCACCATC +
Preference number: 5 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLAAASA*PSCCTI
Trigger: GATGGTGCAACAACTGGGCAAGGCAGAAGCCGCTGC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTATTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: HNAESKTATVTVSKSCNSLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTCTGGATGAAATCTTCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: ATATETTPTTCSNVWMKSSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...AGATTTCATCCAGACATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAACTTGAGCCTAGGAGTTaGAGACCAGCCAGGACAACA +
Preference number: 5 (lower is better)
Translates to: YSSVMRTTSQNSFARAGELEPRS*RPARTT
Trigger: TGTTGTCCTGGCTGGTCTCAAACTCCTAGGCTCAAG...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643556.1
CDS-3UTR CAA 90 bp AACACACCACTGAAACATCCCCATGAGCGTGAGGGCATAGGACAGTGCCAAACCATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 5 (lower is better)
Translates to: NTPLKHPHEREGIGQCQTMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...GGTTTGGCACTGTCCTATGCCCTCACGCTCATGGGGATGTTTCAGTGGTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGACTTGACATTTTGGTaGGATTCACAGTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKDLTFW*DSQCCL
Trigger: GAGACAGCACTGTGAATCCAACCAAAATGTCAAGTC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGGCCTTCGGAACGGACTaGACATTTTGGTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLAFGTD*TFWLDS
Trigger: TGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGGC...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGGAAAGATGGACGGTCACATTaGTGTCCTTCAGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: LCMPGWSRAPGEKMISGKDGRSH*CPSVSK
Trigger: CTTTGATACTGAAGGACACAAATGTGACCGTCCATC...TTTCCCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGGTTCCCCGATCTCCTATCACAGTCAGATCACCATCCTCCAACAGCTGTAAATATGTCGGTTAGAGGTTaGGCCTTCTTGGGAAGTGTC +
Preference number: 5 (lower is better)
Translates to: WFPDLLSQSDHHPPTAVNMSVRG*AFLGSV
Trigger: GACACTTCCCAAGAAGGCCAAACCTCTAACCGACAT...ATTTACAGCTGTTGGAGGATGGTGATCTGACTGTGATAGGAGATCGGGGAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAATGTCGGTTAGAGGTTaGGCCTTCTTGGGAAGTGTC +
Preference number: 5 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSMSVRG*AFLGSV
Trigger: GACACTTCCCAAGAAGGCCAAACCTCTAACCGACAT...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TCTGCTTTGTATGCCCGGATGGTCCAGAGCCCCTGGAGAGAAGATGATAAGTGGAGGTCCCAGGAAGTATaGTGGTTTGTTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: SALYARMVQSPWREDDKWRSQEV*WFVDSF
Trigger: GAATGAATCAACAAACCACAATACTTCCTGGGACCT...CCACTTATCATCTTCTCTCCAGGGGCTCTGGACCATCCGGGCATACAAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCAGGCAAGGCACACCAGTaGTCTTTGTCCAACACTAAA +
Preference number: 5 (lower is better)
Translates to: CHVFQECRLEVWPSWEVSGKAHQ*SLSNTK
Trigger: TTTAGTGTTGGACAAAGACAACTGGTGTGCCTTGCC...TGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCGGCAAGGCACACCAGTaGTCTTTGTCCAACACTAAA +
Preference number: 5 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGGKAHQ*SLSNTK
Trigger: TTTAGTGTTGGACAAAGACAACTGGTGTGCCTTGCC...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AACCTGGACAGGCTCATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGTTCTGCCTTGCCCAGTaGTTGCACCATCTTGTAAAA +
Preference number: 5 (lower is better)
Translates to: NLDRLMKMNPWMHPENVLFCLAQ*LHHLVK
Trigger: TTTTACAAGATGGTGCAACAACTGGGCAAGGCAGAA...CAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCATGAGCCTGTCCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCCAAACCAGCGGGACGTaGTCAAAAACAAGAACCAAG +
Preference number: 5 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVQTSGT*SKTRTK
Trigger: CTTGGTTCTTGTTTTTGACAACGTCCCGCTGGTTTG...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTAC +
Preference number: 5 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNASCSG*GFTSWY
Trigger: GTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGC...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGATTTTAAACAAGGGATaGAGCCACCAGAAGAACACG +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLILNKG*SHQKNT
Trigger: CGTGTTCTTCTGGTGGCTCAATCCCTTGTTTAAAAT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536256.3
ENST00000629385.1
CDS-3UTR CAA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGCTTGATACACTGCTCTaGCAAGGTTTACCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMLDTLL*QGLPVL
Trigger: AAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAG...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACAGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: ATVTVSKSCNSKGGWTVTAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...TGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCATACCAATAGAGATCTaGCTATGCCAAAAAGAACGG +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSIPIEI*LCQKER
Trigger: CCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTAT...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCCCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAAGGGGAACCAAGGGTATaGCGATCCAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: LLAALNTYHLPLISVYGQGEPRV*RSKESR
Trigger: CCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCC...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTCGGCATCCAGAGTTTTaGCCAGAATCAGGGACCCAA +
Preference number: 5 (lower is better)
Translates to: HNAESKTATVTVSKSCNSRHPEF*PESGTQ
Trigger: TTGGGTCCCTGATTCTGGCAAAAACTCTGGATGCCG...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTGCAGTTTTACTCCTCAGAGGTTTGGCCTTCTaGGGAAGTGTCACAATGCTG +
Preference number: 5 (lower is better)
Translates to: TSFMVLILASVKVAVLLLRGLAF*GSVTML
Trigger: CAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCT...GAGGAGTAAAACTGCAACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp TCCAAGGAATCACGGCCACAGCCACAGAGACCACACCAACCACTTGTAGCAATGTGTCCAACACTAAAATaGGATCCTGATTCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: SKESRPQPQRPHQPLVAMCPTLK*DPDSAN
Trigger: ATTAGCAGAATCAGGATCCAATTTTAGTGTTGGACA...CATTGCTACAAGTGGTTGGTGTGGTCTCTGTGGCTGTGGCCGTGATTCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTACACCTCTCTTCTGCTTaGTATGCCCGGATGGTCCAG +
Preference number: 5 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLHLSSA*YARMVQ
Trigger: CTGGACCATCCGGGCATACAAAGCAGAAGAGAGGTG...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCCAAACCAGCGGGACGTaGTCAAAAACAAGAACCAAG +
Preference number: 5 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCQTSGT*SKTRTK
Trigger: CTTGGTTCTTGTTTTTGACAACGTCCCGCTGGTTTG...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTTTTATCCCAGAACCCTaGCAACTCCTCTCCAAGGTG +
Preference number: 5 (lower is better)
Translates to: RFGLLGKCHNAESKTATVFIPEP*QLLSKV
Trigger: CACCTTGGAGAGGAGTTGCAAGGGTTCTGGGATAAA...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTCTATCTGGCCTGTGGTaGTCTTCCCCATGGCCATGT +
Preference number: 5 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGLSGLW*SSPWPC
Trigger: ACATGGCCATGGGGAAGACAACCACAGGCCAGATAG...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CAA 90 bp TACTCCTCAGTGATGAGAACAACTTCCCAAAACAGCTTTGCAAGGGCAGGAGAATCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: YSSVMRTTSQNSFARAGESLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...TTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAGTTGTTCTCATCACTGAGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCATTGGACAGCAGATaGACTATCTGGCCTGTGGTT +
Preference number: 5 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVSLDSR*TIWPVV
Trigger: AACCACAGGCCAGATAGTCAATCTGCTGTCCAATGA...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCTTTAGCATACTTTGTTaGTTTGCCCAGTATGAAAGC +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSFSILC*FAQYES
Trigger: GCTTTCATACTGGGCAAACAAACAAAGTATGCTAAA...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp GCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGAGCGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: AYNPSTEVCLRREEDCLSDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...GCTCAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp CATGCCTATAATCCCAGCACTGAGGTTTGCTTGAGGAGGGAGGAGGATTGCTTGCCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: HAYNPSTEVCLRREEDCLPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...CAAGCAATCCTCCTCCCTCCTCAAGCAAACCTCAGTGCTGGGATTATAGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643556.1
CDS-3UTR CAA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGAACGGACTTGACATTTaGGTTGGATTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMNGLDI*VGFTVL
Trigger: CAGCACTGTGAATCCAACCAAAATGTCAAGTCCGTT...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp AAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGCCAGAGGTTTGGCCTTCTaGGGAAGTGTCACAATGCTG +
Preference number: 5 (lower is better)
Translates to: KDFNTAQTKRLTVNRGLARGLAF*GSVTML
Trigger: CAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCT...GGCTAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATGATTCCAAGGGGAACCAAGGGTATTGCGATCCAAGGAATCACGGCCACAGCCGCAATAATTTTCAGTTaGTCTCATCACGTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: MIPRGTKGIAIQGITATAAIIFS*SHHVSR
Trigger: TCTGCTAACGTGATGAGACAAACTGAAAATTATTGC...GGCTGTGGCCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCCTTGGAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGTAAGGCATTCCACAGTTCCTCATCCGTGTGCTCATTAAAGGGATCCAGGTTTTTCTGCCTTGCCCAGTaGTTGCACCATCTTGTAAAA +
Preference number: 5 (lower is better)
Translates to: CKAFHSSSSVCSLKGSRFFCLAQ*LHHLVK
Trigger: TTTTACAAGATGGTGCAACAACTGGGCAAGGCAGAA...AAACCTGGATCCCTTTAATGAGCACACGGATGAGGAACTGTGGAATGCCTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGCCTTGTAGAGTaGGGGTCTCTGATGCCTTAT +
Preference number: 5 (lower is better)
Translates to: HNAESKTATVTVSKSCNSKGLVE*GSLMPY
Trigger: ATAAGGCATCAGAGACCCCAACTCTACAAGGCCTTT...AGAGTTGCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: RFGLLGKCHNAESKTATVGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TGCAACTCCTCTCCAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATTTAGCATACTTTGTTaGTTTGCCCAGTATGAAAGC +
Preference number: 5 (lower is better)
Translates to: CNSSPRCCERSSGSTEYIFSILC*FAQYES
Trigger: GCTTTCATACTGGGCAAACAAACAAAGTATGCTAAA...TATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTGGAGAGGAGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CAAGGTGCTGTGAGCGGTCTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 5 (lower is better)
Translates to: QGAVSGLLAALNTYHLPLMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...TAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAGACCGCTCACAGCACCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CTGATCAAACTTGTTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTGCCTTCGGAACGGACTaGACATTTTGGTTGGATTCA +
Preference number: 5 (lower is better)
Translates to: LIKLVHIIGQQIDYLACGAFGTD*TFWLDS
Trigger: TGAATCCAACCAAAATGTCAAGTCCGTTCCGAAGGC...ACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAACAAGTTTGATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS CCA 90 bp TCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGATTGAGCCACCTGCTAGTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGSTEYISSSSNLRL*PILNKGLSHLLVWW
Trigger: CCACCAGACTAGCAGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645532.1
CDS-3UTR CAA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTTTAACTCATCAGTTCTaGGATCCACATTTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: RFGLLGKCHNAESKTATVLTHQF*DPHLPS
Trigger: CGACGGCAAATGTGGATCCAAGAACTGATGAGTTAA...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GGTCGAGGGCTGTCCATTGGAAGTGTTTGTAACCATGTGGTCAGTGTGACCAATTCTAAAACCATTATCTaGTCGCTGTCAATAATGGTG +
Preference number: 5 (lower is better)
Translates to: GRGLSIGSVCNHVVSVTNSKTII*SLSIMV
Trigger: CACCATTATTGACAGCGACAAGATAATGGTTTTAGA...ATTGGTCACACTGACCACATGGTTACAAACACTTCCAATGGACAGCCCTCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCATTTTAAACAAGGGATaGAGCCACCAGAAGAACACG +
Preference number: 5 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCILNKG*SHQKNT
Trigger: CGTGTTCTTCTGGTGGCTCAATCCCTTGTTTAAAAT...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CTTCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATGGCCAAGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: LLAALNTYHLPLISVYGQGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...TTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp ACCATCTTTCAATATCAGAATCTGACTTGCAGCTTTGAGGTACTGCAACTGATGGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: TIFQYQNLTCSFEVLQLMDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...CATCAGTTGCAGTACCTCAAAGCTGCAAGTCAGATTCTGATATTGAAAGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCATACCAATAGAGATCTaGCTATGCCAAAAAGAACGG +
Preference number: 5 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVIPIEI*LCQKER
Trigger: CCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTAT...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TTCACATCATTGGACAGCAGATTGACTATCTGGCCTGTGGTTGTCTTCCCCATGCCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: FTSLDSRLTIWPVVVFPMPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...CATGGGGAAGACAACCACAGGCCAGATAGTCAATCTGCTGTCCAATGATGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCGGGGAACCAAGGGTATaGCGATCCAAGGAATCACGG +
Preference number: 5 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVGEPRV*RSKESR
Trigger: CCGTGATTCCTTGGATCGCAATACCCTTGGTTCCCC...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTACCGTGTCCAAGTCATGCAACGGACTTGACATTTaGGTTGGATTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KCHNAESKTATVTVSKSCNGLDI*VGFTVL
Trigger: CAGCACTGTGAATCCAACCAAAATGTCAAGTCCGTT...GCATGACTTGGACACGGTAACTGTTGCAGTTTTAGACTCAGCATTGTGACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGAACGGACTTGACATTTaGGTTGGATTCACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRNGLDI*VGFTVL
Trigger: CAGCACTGTGAATCCAACCAAAATGTCAAGTCCGTT...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGATGGACGGTCACATTaGTGTCCTTCAGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRDGRSH*CPSVSK
Trigger: CTTTGATACTGAAGGACACAAATGTGACCGTCCATC...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TTGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGCACGGTGCAGAGGTCCCAGGAAGTATaGTGGTTTGTTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: LSLSIMVFNLCAMVSTVQRSQEV*WFVDSF
Trigger: GAATGAATCAACAAACCACAATACTTCCTGGGACCT...CTGCACCGTGCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTAAGGTCCCAGGAAGTATaGTGGTTTGTTGATTCATTC +
Preference number: 5 (lower is better)
Translates to: PSHATLKEDGRSHLCPSVRSQEV*WFVDSF
Trigger: GAATGAATCAACAAACCACAATACTTCCTGGGACCT...TACTGAAGGACACAAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCTCAATAAAACATCTGTaGCTCTCTGCTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGSIKHL*LSADEQ
Trigger: TTGCTCATCAGCAGAGAGCAACAGATGTTTTATTGA...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGTACGGTCAATGTATTTaGGCAGTTAGCTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRYGQCI*AVSCVW
Trigger: CCACACACAGCTAACTGCCAAAATACATTGACCGTA...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS CCA 90 bp TCTGGCAGCACTGAATACATATCATCTTCCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGATTGAGCCACCAGAAGAACACGCGT +
Preference number: 5 (lower is better)
Translates to: SGSTEYISSSSNLRL*PILNKGLSHQKNTR
Trigger: ACGCGTGTTCTTCTGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGTGCTGCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000644471.1
ENST00000645237.2
ENST00000646439.1
CDS-3UTR CAA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCTCTAAAACCATTATCTaGTCGCTGTCAATAATGGTG +
Preference number: 5 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVSKTII*SLSIMV
Trigger: CACCATTATTGACAGCGACAAGATAATGGTTTTAGA...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTTTCTGCCTTGCCCAGTaGTTGCACCATCTTGTAAAA +
Preference number: 5 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESFCLAQ*LHHLVK
Trigger: TTTTACAAGATGGTGCAACAACTGGGCAAGGCAGAA...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTAGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCCGTGAAAGTGCATACTTTGTTTGTTaGCCCAGTATGAAAGCCACC +
Preference number: 5 (lower is better)
Translates to: PYTSYNFIHGPDPGIRESAYFVC*PSMKAT
Trigger: GGTGGCTTTCATACTGGGCAAACAAACAAAGTATGC...ACTTTCACGGATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCTTTAGCATACTTTGTTaGTTTGCCCAGTATGAAAGC +
Preference number: 5 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGFSILC*FAQYES
Trigger: GCTTTCATACTGGGCAAACAAACAAAGTATGCTAAA...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CTGGTGGTGGGCGTTTCTGATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTGAAGTCCAATTTCAGTaGTCAAGATCTTATCAATCC +
Preference number: 5 (lower is better)
Translates to: LVVGVSDIPKVLLFQGLCEVQFQ*SRSYQS
Trigger: GGATTGATAAGATCTTGACAACTGAAATTGGACTTC...ACACAGACCTTGAAAAAGAAGCACCTTGGGAATATCAGAAACGCCCACCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGCGAAGTCCAATTTCAGTaGTCAAGATCTTATCAATCC +
Preference number: 5 (lower is better)
Translates to: RRMDGHICVLQYQSTFKGEVQFQ*SRSYQS
Trigger: GGATTGATAAGATCTTGACAACTGAAATTGGACTTC...GCCCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATGCCACGTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCGCAATAATTTTCAGTTaGTCTCATCACGTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: MPRISGMSVRGLAFLGSVAIIFS*SHHVSR
Trigger: TCTGCTAACGTGATGAGACAAACTGAAAATTATTGC...GACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATACGTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ACAGTTACCGTGTCCAAGTCATGCAACTCTAAAGGAGGATGGACGGTCACATTTTCAATAAAACATCTGTaGCTCTCTGCTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: TVTVSKSCNSKGGWTVTFSIKHL*LSADEQ
Trigger: TTGCTCATCAGCAGAGAGCAACAGATGTTTTATTGA...AAATGTGACCGTCCATCCTCCTTTAGAGTTGCATGACTTGGACACGGTAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GTATTTCAGGAATGTCGGTTAGAGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGTCCAACACTAAAATaGGATCCTGATTCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: VFQECRLEVWPSWEVSQCCPTLK*DPDSAN
Trigger: ATTAGCAGAATCAGGATCCAATTTTAGTGTTGGACA...GCATTGTGACACTTCCCAAGAAGGCCAAACCTCTAACCGACATTCCTGAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGACATTCTCTGTATCTaGGCTCTCCAGAGCACCATC +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTDILCI*ALQSTI
Trigger: GATGGTGCTCTGGAGAGCCAAGATACAGAGAATGTC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TCCGATAAATCATATGGCACATGGCTACTCGTAACCTCATCCCAGCACACTGAATTTAGCATACTTTGTTaGTTTGCCCAGTATGAAAGC +
Preference number: 5 (lower is better)
Translates to: SDKSYGTWLLVTSSQHTEFSILC*FAQYES
Trigger: GCTTTCATACTGGGCAAACAAACAAAGTATGCTAAA...TTCAGTGTGCTGGGATGAGGTTACGAGTAGCCATGTGCCATATGATTTATCGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CAAATAAAATATTACTCCTCAGAGTTCCCGAGAACACCCAGGGCTGCTGAGACAGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: QIKYYSSEFPRTPRAAETDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...TGTCTCAGCAGCCCTGGGTGTTCTCGGGAACTCTGAGGAGTAATATTTTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CTTGCACTGAAAAATGAAGCCAAATTCATCCCTCTGAGGCAGGAACTTCTCAGACCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: LALKNEAKFIPLRQELLRPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...TCTGAGAAGTTCCTGCCTCAGAGGGATGAATTTGGCTTCATTTTTCAGTGCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGTCGAGGGCTGTCCATaGGAAGTGTTTGTAACCATG +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTVEGCP*EVFVTM
Trigger: CATGGTTACAAACACTTCCAATGGACAGCCCTCGAC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGGTTTGGCCTTCTTGGGAAGTGTCACAATGCTGAGTCTAAAACTGCAACAGTTTCAATAAAACATCTGTaGCTCTCTGCTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: RFGLLGKCHNAESKTATVSIKHL*LSADEQ
Trigger: TTGCTCATCAGCAGAGAGCAACAGATGTTTTATTGA...AACTGTTGCAGTTTTAGACTCAGCATTGTGACACTTCCCAAGAAGGCCAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS GCA 90 bp CATGAAATGGAGGAAGAAGAAGGGGATTCAACACACCCAAGTACTTaGAAGTTCGGGAGACCTCTAGAAACTACTTACATCTTTCAATAT +
Preference number: 5 (lower is better)
Translates to: HEMEEEEGDSTHPST*KFGRPLETTYIFQY
Trigger: ATATTGAAAGATGTAAGTAGTTTCTAGAGGTCTCCCGAACTTGCAAGTACTTGGGTGTGTTGAATCCCCTTCTTCTTCCTCCATTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS CCA 90 bp CTAAAAACGTCAGCGGCAGCAAATCATCCAAGTGTCCAATGTCTTTaGAGAAACGATTTAAAATTCTTCCTGAAGGCTAGGTCAATTGAG +
Preference number: 5 (lower is better)
Translates to: LKTSAAANHPSVQCL*RNDLKFFLKARSIE
Trigger: CTCAATTGACCTAGCCTTCAGGAAGAATTTTAAATCGTTTCTCCAAAGACATTGGACACTTGGATGATTTGCTGCCGCTGACGTTTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644880.1
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGGCAAGGCACACCAGTaGTCTTTGTCCAACACTAAA +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTGKAHQ*SLSNTK
Trigger: TTTAGTGTTGGACAAAGACAACTGGTGTGCCTTGCC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GAACAAAACAGGTTCATAAGACAAGCTGATATTAAACATGTGACCAGGCTGGGTATTTTAAACAAGGGATaGAGCCACCAGAAGAACACG +
Preference number: 5 (lower is better)
Translates to: EQNRFIRQADIKHVTRLGILNKG*SHQKNT
Trigger: CGTGTTCTTCTGGTGGCTCAATCCCTTGTTTAAAAT...ACCCAGCCTGGTCACATGTTTAATATCAGCTTGTCTTATGAACCTGTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643051.1
CDS-3UTR CAA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp GTACTATTTTCTAACAAGAAGCCTTCAGGGGAAATAATGGATCCTAGTTATGTCCTTGATACACTGCTCTaGCAAGGTTTACCCGTGCTT +
Preference number: 5 (lower is better)
Translates to: VLFSNKKPSGEIMDPSYVLDTLL*QGLPVL
Trigger: AAGCACGGGTAAACCTTGCAAGAGCAGTGTATCAAG...GACATAACTAGGATCCATTATTTCCCCTGAAGGCTTCTTGTTAGAAAATAGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AAAGGAGGATGGACGGTCACATTTGTGTCCTTCAGTATCAAAGCACCTTTAAGGGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: KGGWTVTFVSFSIKAPLRDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...CCTTAAAGGTGCTTTGATACTGAAGGACACAAATGTGACCGTCCATCCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTAGAGGTTTGGCCTTCTaGGGAAGTGTCACAATGCTG +
Preference number: 5 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSRGLAF*GSVTML
Trigger: CAGCATTGTGACACTTCCCAAGAAGGCCAAACCTCT...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACATTAACTCATCAGTTCTaGGATCCACATTTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTLTHQF*DPHLPS
Trigger: CGACGGCAAATGTGGATCCAAGAACTGATGAGTTAA...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACCTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAACTTCCCAAAACAGCTTaGCAAGGGCAGGAGAATGAT +
Preference number: 5 (lower is better)
Translates to: STSLYDFFISFLFVFLPKLPKTA*QGQEND
Trigger: ATCATTCTCCTGCCCTTGCAAAGCTGTTTTGGGAAG...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642524.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTGGGTCTAGAAGATTGTaGAGACCAAACCGAAGACTC +
Preference number: 5 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSGSRRL*RPNRRL
Trigger: GAGTCTTCGGTTTGGTCTCAACAATCTTCTAGACCC...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACGGAGGGTCTAGAAGATaGTTGAGACCAAACCGAAGA +
Preference number: 5 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNGGSRR*LRPNRR
Trigger: TCTTCGGTTTGGTCTCAACAATCTTCTAGACCCTCC...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643556.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTACCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGACTTGACATTTTGGTaGGATTCACAGTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTDLTFW*DSQCCL
Trigger: GAGACAGCACTGTGAATCCAACCAAAATGTCAAGTC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACATACGGTCAATGTATTTaGGCAGTTAGCTGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTYGQCI*AVSCVW
Trigger: CCACACACAGCTAACTGCCAAAATACATTGACCGTA...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAGGGTTATGTCCAACACTAAAATaGGATCCTGATTCTGCTAAT +
Preference number: 5 (lower is better)
Translates to: RKDFNTAQTKRLTVNRGLCPTLK*DPDSAN
Trigger: ATTAGCAGAATCAGGATCCAATTTTAGTGTTGGACA...TAACCCTCTGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACTTAACTCATCAGTTCTaGGATCCACATTTGCCGTCG +
Preference number: 5 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNLTHQF*DPHLPS
Trigger: CGACGGCAAATGTGGATCCAAGAACTGATGAGTTAA...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp ATGAAAATGAACCCCTGGATGCATCCTGAGAACGTACTGCATAATTATAGTCAAATACCAATAGAGATCTaGCTATGCCAAAAAGAACGG +
Preference number: 5 (lower is better)
Translates to: MKMNPWMHPENVLHNYSQIPIEI*LCQKER
Trigger: CCGTTCTTTTTGGCATAGCAAGATCTCTATTGGTAT...TTGACTATAATTATGCAGTACGTTCTCAGGATGCATCCAGGGGTTCATTTTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp CCTATTGGATTTCTATCAAAGAATAATACCGGAGCTTTCAGAATTGACTCAAACGACTTGACATTTTGGTaGGATTCACAGTGCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PIGFLSKNNTGAFRIDSNDLTFW*DSQCCL
Trigger: GAGACAGCACTGTGAATCCAACCAAAATGTCAAGTC...GTTTGAGTCAATTCTGAAAGCTCCGGTATTATTCTTTGATAGAAATCCAATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TTTTATTATCCTTATACCAGTTATAACTTCATTCATGGTCCTGATCCTGGCATCGATGGACGGTCACATTaGTGTCCTTCAGTATCAAAG +
Preference number: 5 (lower is better)
Translates to: FYYPYTSYNFIHGPDPGIDGRSH*CPSVSK
Trigger: CTTTGATACTGAAGGACACAAATGTGACCGTCCATC...GATGCCAGGATCAGGACCATGAATGAAGTTATAACTGGTATAAGGATAATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS-3UTR CAA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATGCACACCAGTTGTCTTaGTCCAACACTAAAATTGGA +
Preference number: 5 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNAHQLS*SNTKIG
Trigger: TCCAATTTTAGTGTTGGACAAAGACAACTGGTGTGC...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp ATATTCCCAAGGTGCTTCTTTTTCAAGGTCTGTGTATTCAATGACCCTTTCTACTTTAGCATACTTTGTTaGTTTGCCCAGTATGAAAGC +
Preference number: 5 (lower is better)
Translates to: IFPRCFFFKVCVFNDPFYFSILC*FAQYES
Trigger: GCTTTCATACTGGGCAAACAAACAAAGTATGCTAAA...GTAGAAAGGGTCATTGAATACACAGACCTTGAAAAAGAAGCACCTTGGGAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACACCGGAGCTTTCAGAATaGACTCAAACATTTTGTTGT +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTPELSE*TQTFCC
Trigger: ACAACAAAATGTTTGAGTCAATTCTGAAAGCTCCGG...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AACCATTTTGTTAGAGCTGGAGATCCTTGGATAAGTTGGGAGAAATATTCAAATATGGGCTGGATTACTTaGGCACTTTCCTCAATTAAC +
Preference number: 5 (lower is better)
Translates to: NHFVRAGDPWISWEKYSNMGWIT*ALSSIN
Trigger: GTTAATTGAGGAAAGTGCCAAAGTAATCCAGCCCAT...ATTTGAATATTTCTCCCAACTTATCCAAGGATCTCCAGCTCTAACAAAATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp TGCAATTTAGAAAGGATTTCAATACAGCCCAAACCAAAAGGCTTACAGTCAACAGAAGTCCAATTTCAGTaGTCAAGATCTTATCAATCC +
Preference number: 5 (lower is better)
Translates to: CNLERISIQPKPKGLQSTEVQFQ*SRSYQS
Trigger: GGATTGATAAGATCTTGACAACTGAAATTGGACTTC...TGTTGACTGTAAGCCTTTTGGTTTGGGCTGTATTGAAATCCTTTCTAAATTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000643051.1
ENST00000643842.1
ENST00000645237.2
CDS-3UTR CAA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTTCTAAAACCATTATCTaGTCGCTGTCAATAATGGTG +
Preference number: 5 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSSKTII*SLSIMV
Trigger: CACCATTATTGACAGCGACAAGATAATGGTTTTAGA...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AATAGGCTCTCTTTATTTTGCAGCAAAACATACGGCTCATCATATTCTTTCAGTGACTCAAACATTTTGTaGTGCAAAGTTTGTGAAGAG +
Preference number: 5 (lower is better)
Translates to: NRLSLFCSKTYGSSYSFSDSNIL*CKVCEE
Trigger: CTCTTCACAAACTTTGCACAACAAAATGTTTGAGTC...ACTGAAAGAATATGATGAGCCGTATGTTTTGCTGCAAAATAAAGAGAGCCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000643051.1
ENST00000643842.1
CDS-3UTR CAA 90 bp AGCACAAGCCTTTATGACTTTTTCATATCGTTCCTTTTCGTATTTCTTCCCAAAGCAATAATTTTCAGTTaGTCTCATCACGTTAGCAGA +
Preference number: 5 (lower is better)
Translates to: STSLYDFFISFLFVFLPKAIIFS*SHHVSR
Trigger: TCTGCTAACGTGATGAGACAAACTGAAAATTATTGC...TTTGGGAAGAAATACGAAAAGGAACGATATGAAAAAGTCATAAAGGCTTGTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643842.1
CDS GCA 72 bp GGTTGGGCTTCACCTCCTGGTACACGGGCAGCATCTTaGCGGGCGGGGCGGGCGCGGGCCGGGGTCGCGCTG +
Preference number: 6 (lower is better)
Translates to: GWASPPGTRAAS*RAGRARAGVAL
Trigger: CAGCGCGACCCCGGCCCGCGCCCGCCCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000643816.1
ENST00000643842.1
ENST00000644471.1
ENST00000645237.2
CDS CAA 90 bp CACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTACACGGGCAGCATCTTGCCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: HQKNTREQRFASCSG*GFTSWYTGSILPGG
Trigger: CCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000644471.1
ENST00000645237.2
CDS CAA 90 bp GACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTACACGGGCAGCATCTTGCCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: DQKNTREQRFASCSG*GFTSWYTGSILPGG
Trigger: CCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643816.1
ENST00000643842.1
CDS CAA 90 bp CATCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTACACGGGCAGCATCTTGCCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: HQKNTREQRFASCSG*GFTSWYTGSILPGG
Trigger: CCCGCCCGGCAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000645532.1
CDS GCA 72 bp CACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGC +
Preference number: 6 (lower is better)
Translates to: HQKNTREQRFAS*SGLGFTSWYTG
Trigger: GCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000644471.1
ENST00000645237.2
ENST00000646439.1
CDS GCA 72 bp GACCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGC +
Preference number: 6 (lower is better)
Translates to: DQKNTREQRFAS*SGLGFTSWYTG
Trigger: GCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643816.1
ENST00000643842.1
CDS GCA 72 bp CATCAGAAGAACACGCGTGAGCAGAGGTTCGCGTCCTaGAGCGGGTTGGGCTTCACCTCCTGGTACACGGGC +
Preference number: 6 (lower is better)
Translates to: HQKNTREQRFAS*SGLGFTSWYTG
Trigger: GCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTTCTTCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642524.1
ENST00000645532.1
CDS CAA 72 bp AACACGCGTGAGCAGAGGTTCGCGTCCTGCAGCGGGTaGGGCTTCACCTCCTGGTACACGGGCAGCATCTTG +
Preference number: 6 (lower is better)
Translates to: NTREQRFASCSG*GFTSWYTGSIL
Trigger: CAAGATGCTGCCCGTGTACCAGGAGGTGAAGCCCAACCCGCTGCAGGACGCGAACCTCTGCTCACGCGTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000642524.1
ENST00000643051.1
ENST00000643816.1
ENST00000643842.1
ENST00000644471.1
ENST00000645237.2
ENST00000645532.1
ENST00000646439.1
CDS CCA 72 bp CTGGGTGCAGAAAAACCTGCGGCCTCCCAAGCTCCATaGTCACGTATCCACCAAACAGCACACGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: LGAEKPAASQAP*SRIHQTAHAGL
Trigger: GAGGCCTGCGTGTGCTGTTTGGTGGATACGTGACCATGGAGCTTGGGAGGCCGCAGGTTTTTCTGCACCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467685.2
CDS GCA 72 bp CATCTTGATACACTTGCAAGGTTTACCCGTGCTTTCTaGCCTCCACTCAGCGTGGTTCCCCGATCTCCTATC +
Preference number: 6 (lower is better)
Translates to: HLDTLARFTRAF*PPLSVVPRSPI
Trigger: GATAGGAGATCGGGGAACCACGCTGAGTGGAGGGCAGAAAGCACGGGTAAACCTTGCAAGTGTATCAAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS TCA 72 bp ACACTTACTAGGTGGCCTTTTGCAGAAAACGTTTGCTaGCAGAGCCACAGGCCATGCATGGTGAGAGAAAGA +
Preference number: 6 (lower is better)
Translates to: TLTRWPFAENVC*QSHRPCMVRER
Trigger: TCTTTCTCTCACCATGCATGGCCTGTGGCTCTGTCAGCAAACGTTTTCTGCAAAAGGCCACCTAGTAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643816.1
CDS CAA 72 bp TCTAATCTCCGTTTATGGCCAATTTTAAACAAGGGATaGAGCCACCTGCTAGTCTGGTGGCTGAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SNLRLWPILNKG*SHLLVWWLRQE
Trigger: CTCCTGCCTCAGCCACCAGACTAGCAGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645532.1
CDS CAA 90 bp ATTGGGAGCAACAGGAATTCCGCAGGTGAAGGACTCACCATTATCTaGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCAATGGTTAGC +
Preference number: 6 (lower is better)
Translates to: IGSNRNSAGEGLTII*SLSIMVFNLCAMVS
Trigger: GCTAACCATTGCACACAGATTGAACACCATTATTGACAGCGACAAGATAATGGTGAGTCCTTCACCTGCGGAATTCCTGTTGCTCCCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484109.1
CDS GCA 72 bp GAGGAAGAAGAAGGGGATTCAACACACCCAAGTACTTaGAAGTTCGGGAGACCTCTAGAAACTACTTACATC +
Preference number: 6 (lower is better)
Translates to: EEEEGDSTHPST*KFGRPLETTYI
Trigger: GATGTAAGTAGTTTCTAGAGGTCTCCCGAACTTGCAAGTACTTGGGTGTGTTGAATCCCCTTCTTCTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS CAA 72 bp GGAGGAAGAAGAAGGGGATTCAACACACCCAAGTACTaGCAAGTTCGGGAGACCTCTAGAAACTACTTACAT +
Preference number: 6 (lower is better)
Translates to: GGRRRGFNTPKY*QVRETSRNYLH
Trigger: ATGTAAGTAGTTTCTAGAGGTCTCCCGAACTTGCAAGTACTTGGGTGTGTTGAATCCCCTTCTTCTTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644471.1
CDS CAA 72 bp AACAGGAATTCCGCAGGTGAAGGACTCACCATTATCTaGTCGCTGTCAATAATGGTGTTCAATCTGTGTGCA +
Preference number: 6 (lower is better)
Translates to: NRNSAGEGLTII*SLSIMVFNLCA
Trigger: TGCACACAGATTGAACACCATTATTGACAGCGACAAGATAATGGTGAGTCCTTCACCTGCGGAATTCCTGTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484109.1
CDS TCA 72 bp AGTGAACATAATTGGGAGCAACAGGAATTCCGCAGGTaGAGGACTCACCATTATCTTGTCGCTGTCAATAAT +
Preference number: 6 (lower is better)
Translates to: SEHNWEQQEFRR*RTHHYLVAVNN
Trigger: ATTATTGACAGCGACAAGATAATGGTGAGTCCTTCACCTGCGGAATTCCTGTTGCTCCCAATTATGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484109.1
CDS CCA 72 bp TCAGCGGCAGCAAATCATCCAAGTGTCCAATGTCTTTaGAGAAACGATTTAAAATTCTTCCTGAAGGCTAGG +
Preference number: 6 (lower is better)
Translates to: SAAANHPSVQCL*RNDLKFFLKAR
Trigger: CCTAGCCTTCAGGAAGAATTTTAAATCGTTTCTCCAAAGACATTGGACACTTGGATGATTTGCTGCCGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644880.1
CDS TCA 72 bp GTATTGACATCTGCTTTTGTGCTACAATGGCAAAGGTaGTTCATCACAACAGAGACAATAATGGCACACAAT +
Preference number: 6 (lower is better)
Translates to: VLTSAFVLQWQR*FITTETIMAHN
Trigger: ATTGTGTGCCATTATTGTCTCTGTTGTGATGAATCACCTTTGCCATTGTAGCACAAAAGCAGATGTCAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643816.1
CDS CCA 72 bp ACTGAATACATATCATCTTCCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGATTGAGCCACCAGAAG +
Preference number: 6 (lower is better)
Translates to: TEYISSSSNLRL*PILNKGLSHQK
Trigger: CTTCTGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000536256.3
ENST00000629385.1
ENST00000643051.1
ENST00000644471.1
ENST00000645237.2
ENST00000646439.1
CDS CCA 72 bp ACTGAATACATATCATCTTCCTCTAATCTCCGTTTATaGCCAATTTTAAACAAGGGATTGAGCCACCTGCTA +
Preference number: 6 (lower is better)
Translates to: TEYISSSSNLRL*PILNKGLSHLL
Trigger: TAGCAGGTGGCTCAATCCCTTGTTTAAAATTGGCCATAAACGGAGATTAGAGGAAGATGATATGTATTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645532.1