RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000023839

Ensembl transcript IDs: ENST00000370434.1, ENST00000496621.1, ENST00000647814.1, ENST00000647836.1, ENST00000648324.1, ENST00000648523.1, ENST00000648689.1, ENST00000649459.1, ENST00000649493.1, ENST00000649932.1

Found 479 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGTTTCTGTTGAGACGGAGTTGCGATCTTGTCGATAGGCTGGAGTaGAGTGGCGCGACCTCGGCTTACTGCAAGATCTGCCTCCCAGGT +
Preference number: 1 (lower is better)
Translates to: LFLLRRSCDLVDRLE*SGATSAYCKICLPG
Trigger: ACCTGGGAGGCAGATCTTGCAGTAAGCCGAGGTCGCGCCACTGCACTCCAGCCTATCGACAAGATCGCAACTCCGTCTCAACAGAAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR CCA 90 bp AGTTCTGCTGGGAGCTCTTCTCCTGCCGTCTCTGGAGTGCCCGCCTaGCTTTCTGCAGCTCTCTCTTCATGTGCGTTTCAAACTTGCTCA +
Preference number: 1 (lower is better)
Translates to: SSAGSSSPAVSGVPA*LSAALSSCAFQTCS
Trigger: TGAGCAAGTTTGAAACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGGAGAAGAGCTCCCAGCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
3UTR GCA 90 bp CCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTTCAAACTTaGTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGA +
Preference number: 1 (lower is better)
Translates to: PAWLSAALSSCAFQT*SLMSWFSSLHQLPR
Trigger: TCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
3UTR CCA 90 bp GCAGCTCTCTCTTCATGTGCGTTTCAAACTTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCA +
Preference number: 1 (lower is better)
Translates to: AALSSCAFQTCSLMS*FSSLHQLPRHPRVS
Trigger: TGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAACGCACATGAAGAGAGAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
3UTR-3UTR TCA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTCTTGTGGCGCCTCCGTaGGACCCAGACATCTTAAAG +
Preference number: 2 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRLVAPP*DPDILK
Trigger: CTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAG...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR-3UTR CCA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTGATGGATTCTTATTCTaGGCTTGTGGCGCCTCCGTG +
Preference number: 2 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRDGFLF*ACGASV
Trigger: CACGGAGGCGCCACAAGCCCAGAATAAGAATCCATC...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR-3UTR TCA 90 bp TGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTCCTTGGGGGCCTCCTTaGTGCCCTCAAGAAATAAAG +
Preference number: 2 (lower is better)
Translates to: CRLWSARLAFCSSLFMCVPWGPP*CPQEIK
Trigger: CTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGG...AACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR TCA 90 bp GGCATCTCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGCTCCCGGCTTCAAAGTaGTTCTCCTGCTTAAGCTTC +
Preference number: 2 (lower is better)
Translates to: GISLGASLMPSRNKAAPVLPASK*FSCLSF
Trigger: GAAGCTTAAGCAGGAGAATCACTTTGAAGCCGGGAG...CACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCGCAGTAGCGCAATCTTaGCTCACCGCAACCTCCATC +
Preference number: 2 (lower is better)
Translates to: DKGILALTLILVQARQPGAVAQS*LTATSI
Trigger: GATGGAGGTTGCGGTGAGCCAAGATTGCGCTACTGC...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp GGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGCCTCTCTGCCACTCTaGCATCTCCTTGGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: GFHLFINFPDILECQRTLASLPL*HLLGGL
Trigger: GAGGCCCCCAAGGAGATGCCAGAGTGGCAGAGAGGC...AAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR TCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGGCCTGTGGGCGATGGTaGTCACTGTGCAGTGGGCGA +
Preference number: 2 (lower is better)
Translates to: AVHILNASFLSHKVKGSRACGRW*SLCSGR
Trigger: TCGCCCACTGCACAGTGATCACCATCGCCCACAGGC...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR GCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCACCCAGGCACAGCAGCTaGCTCTGGCCTATGCTAACA +
Preference number: 2 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSPRHSS*LWPMLT
Trigger: TGTTAGCATAGGCCAGAGGCAGCTGCTGTGCCTGGG...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR GCA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTCACTGGCTGCCTCTCTaGCACTCTGGCATCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLHWLPL*HSGISL
Trigger: CAAGGAGATGCCAGAGTGGCAGAGAGGCAGCCAGTG...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGAGCCTCTCTGCCACTCTaGCATCTCCTTGGGGGCCTC +
Preference number: 2 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGASLPL*HLLGGL
Trigger: GAGGCCCCCAAGGAGATGCCAGAGTGGCAGAGAGGC...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCACTTATTCTGGGCTTGTaGCGCCTCCGTGAGACCCAG +
Preference number: 2 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSLILGL*RLRETQ
Trigger: CTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAG...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR-3UTR CCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCACCAGGACCAGGATCTTaGATTTCCGAAGCAGAGCCC +
Preference number: 2 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSPGPGS*ISEAEP
Trigger: GGGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGG...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR TCA 90 bp GGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTCCTTGGGGGCCTCCTTaGTGCCCTCAAGAAATAAAG +
Preference number: 2 (lower is better)
Translates to: GFHLFINFPDILECQRTLPWGPP*CPQEIK
Trigger: CTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGG...AAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp GGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTTTCCTCCTCAAACACTaGCTGCCTCTCTGCCACTCT +
Preference number: 2 (lower is better)
Translates to: GFHLFINFPDILECQRTLFLLKH*LPLCHS
Trigger: AGAGTGGCAGAGAGGCAGCCAGTGTTTGAGGAGGAA...AAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGATGGTGTGCAGCCTGTaGGCGATGGTGATCACTGTG +
Preference number: 2 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRMVCSL*AMVITV
Trigger: CACAGTGATCACCATCGCCCACAGGCTGCACACCAT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTTGGCATTACCAGTTTaGCATCAGCTAGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDLALPV*HQLVCA
Trigger: TGCACAAACTAGCTGATGCCAAACTGGTAATGCCAA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
3UTR CAA 90 bp GCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAG +
Preference number: 2 (lower is better)
Translates to: ARLAFCSSLFMCVSN*LTNVLVFISSSTSQ
Trigger: CTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
3UTR-3UTR TCA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTGTAGCCTTTCAGAATaGTGCTGTCATACCAGCTGT +
Preference number: 2 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLCSLSE*CCHTSC
Trigger: ACAGCTGGTATGACAGCATCATTCTGAAAGGCTACA...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR-3UTR CCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGGTGATCACTGTGCAGTaGGCGAACTCGTTTTGGATG +
Preference number: 2 (lower is better)
Translates to: AVHILNASFLSHKVKGSRVITVQ*ANSFWM
Trigger: CATCCAAAACGAGTTCGCCCACTGCACAGTGATCAC...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR GCA 90 bp CTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAACAGGTTTGCACCACTaGACACGGCTTCTTGTTCTT +
Preference number: 2 (lower is better)
Translates to: LMSWFSSLHQLPRHPRVSTGLHH*TRLLVL
Trigger: AAGAACAAGAAGCCGTGTGCAGTGGTGCAAACCTGT...TGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGATATTAAACAGGGGGTaGCCAAAGTGCTGTAATTCT +
Preference number: 2 (lower is better)
Translates to: AVHILNASFLSHKVKGSRILNRG*PKCCNS
Trigger: AGAATTACAGCACTTTGGCCACCCCCTGTTTAATAT...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTGCTCTTTCCTGCTGTaGCCATTAGGGAACATATTA +
Preference number: 2 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRCSFLL*PLGNIL
Trigger: TAATATGTTCCCTAATGGCCACAGCAGGAAAGAGCA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR CCA 90 bp TCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACTCAGGAATGAAGCTATaGATGATGGATTCTTATTCT +
Preference number: 2 (lower is better)
Translates to: SWFSSLHQLPRHPRVSEDSGMKL*MMDSYS
Trigger: AGAATAAGAATCCATCATCCATAGCTTCATTCCTGA...GTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGGATGGTCGTCTGAATaGGGTTGTCTGTCTCTAGAT +
Preference number: 2 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYGWSSE*GCLSLD
Trigger: ATCTAGAGACAGACAACCTCATTCAGACGACCATCC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAATAATGCACCTATTTaGATCACCATGGATGAATCT +
Preference number: 2 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYNNAPI*ITMDES
Trigger: AGATTCATCCATGGTGATGCAAATAGGTGCATTATT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
3UTR-3UTR CAA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGATTCTTATTCTGGGCTaGTGGCGCCTCCGTGAGACC +
Preference number: 3 (lower is better)
Translates to: PAVSGVPAWLSAALSSCAILILG*WRLRET
Trigger: GGTCTCACGGAGGCGCCACAAGCCCAGAATAAGAAT...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR GCA 72 bp TTGAGACGGAGTTGCGATCTTGTCGATAGGCTGGAGTaGAGTGGCGCGACCTCGGCTTACTGCAAGATCTGC +
Preference number: 3 (lower is better)
Translates to: LRRSCDLVDRLE*SGATSAYCKIC
Trigger: GCAGATCTTGCAGTAAGCCGAGGTCGCGCCACTGCACTCCAGCCTATCGACAAGATCGCAACTCCGTCTCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGTGGGCGAACTCGTTTaGGATGGTCGTCTGAATGAG +
Preference number: 3 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDVGELV*DGRLNE
Trigger: CTCATTCAGACGACCATCCAAAACGAGTTCGCCCAC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR CAA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGTCCAGGACCAGGATCTaGGATTTCCGAAGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: AVHILNASFLSHKVKGSRSRTRI*DFRSRA
Trigger: GGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGGA...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR-3UTR CAA 90 bp TCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACTCCTTGGGGGCCTCCTaGATGCCCTCAAGAAATAAA +
Preference number: 3 (lower is better)
Translates to: SWFSSLHQLPRHPRVSEDSLGAS*MPSRNK
Trigger: TTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA...GTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAATTCAGGACAGTGGTaGTCCCTGGGAGGGGTGGGT +
Preference number: 3 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYNSGQW*SLGGVG
Trigger: ACCCACCCCTCCCAGGGACAACCACTGTCCTGAATT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
3UTR TCA 72 bp TCTGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTaGGACCCAGACATCTTAAAGTTATATTCATTAAGA +
Preference number: 3 (lower is better)
Translates to: SVLPYSGLVAPP*DPDILKLYSLR
Trigger: TCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
3UTR-3UTR CAA 90 bp TTTCAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGATCCTTGGGGGCCTCCTaGATGCCCTCAAGAAATAAA +
Preference number: 3 (lower is better)
Translates to: FQTCSLMSWFSSLHQLPRSLGAS*MPSRNK
Trigger: TTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA...TCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR TCA 72 bp ATGATGGATTCTTATTCTGGGCTTGTGGCGCCTCCGTaGGACCCAGACATCTTAAAGTTATATTCATTAAGA +
Preference number: 3 (lower is better)
Translates to: MMDSYSGLVAPP*DPDILKLYSLR
Trigger: TCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGAATCCATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
3UTR CCA 72 bp TCTTCATGTGCGTTTCAAACTTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAACTTCCCAGACATCCT +
Preference number: 3 (lower is better)
Translates to: SSCAFQTCSLMS*FSSLHQLPRHP
Trigger: AGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAACGCACATGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
3UTR GCA 72 bp ATGCTAATGATCCCCAATATTAAAACTGATACATTGTaGTGTATTCATACAATGCCAGACTACAGAGCAGTG +
Preference number: 3 (lower is better)
Translates to: MLMIPNIKTDTL*CIHTMPDYRAV
Trigger: CACTGCTCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGGGATCATTAGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTCTGCCGTCTCTGGAGTaGCCGCCTGGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRLPSLE*PPGFLQ
Trigger: CTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTCAAGCCAGGCAGCCTaGCTCCAGAGTTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAVSGVPAWLSAALSSCASSQAA*LQSSAG
Trigger: CCCAGCAGAACTCTGGAGCCAGGCTGCCTGGCTTGA...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTGCCTCTCTGCCACTCTaGCATCTCCTTGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AQSWLTATSISRLQSDSPASLPL*HLLGGL
Trigger: GAGGCCCCCAAGGAGATGCCAGAGTGGCAGAGAGGC...AGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCCTGCCGTCTCTGGAGTaGCCGCCTGGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DKGILALTLILVQARQPGLPSLE*PPGFLQ
Trigger: CTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCTCCTGCCGTCTCTGGAGTaGCCGCCTGGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QGHLGFDSDSCSSQAAWLLPSLE*PPGFLQ
Trigger: CTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG...GAGCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTACACGTGGAGAAGCTaGCAGGGGGCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDYTWRS*QGARSH
Trigger: ATGGCTCCTGGCCCCCTGGCAGCTTCTCCACGTGTA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GCAGTAGCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATGCCCGCCTGGCTTTCTaGAGCTCTCTCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: AVAQSWLTATSISRLQSDARLAF*SSLFMC
Trigger: GCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGC...ATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGCTACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp TGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTGAACAGCAGGGACTGTaGCTTGTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CRLWSARLAFCSSLFMCVEQQGL*LVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTC...AACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTTCTGGAGTGCCCGCCTaGCTTTCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: AQSWLTATSISRLQSDSPSGVPA*LSAALS
Trigger: AGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGA...AGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGACAGTGGTTGTCCCTaGGAGGGGTGGGTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDDSGCP*EGWVAR
Trigger: CCTTGCTACCCACCCCTCCCAGGGACAACCACTGTC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CTTCTCCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LLLPSLECPPGFLQLSLHVRIRV*NWKVPQ
Trigger: CTGTGGCACTTTCCAATTTCAGACTCTGATCCGGAC...ATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCAGCCTGTGGGCGATGGTaGTCACTGTGCAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSACGRW*SLCSGR
Trigger: TCGCCCACTGCACAGTGATCACCATCGCCCACAGGC...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR GCA 90 bp AATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTGCTTTACACGTGGAGAAGCTaGCAGGGGGCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NLGSPQPPSPGFKVILLLYTWRS*QGARSH
Trigger: ATGGCTCCTGGCCCCCTGGCAGCTTCTCCACGTGTA...AAGCAGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp TGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTAAACCAGGAGCCATGTaGCTAGGTAGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: CRLWSARLAFCSSLFMCVKPGAM*LGRGLD
Trigger: ATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT...AACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATCTGGCTCCAGAGTTCTaGTGGGAGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDLAPEF*WELFSC
Trigger: GCAGGAGAAGAGCTCCCAGCAGAACTCTGGAGCCAG...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCCTGGCTCCAGAGTTCTaGTGGGAGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: DKGILALTLILVQARQPGLAPEF*WELFSC
Trigger: GCAGGAGAAGAGCTCCCAGCAGAACTCTGGAGCCAG...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCCACTGGCTGCCTCTCTaGCACTCTGGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DKGILALTLILVQARQPGHWLPL*HSGISL
Trigger: CAAGGAGATGCCAGAGTGGCAGAGAGGCAGCCAGTG...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTCCTGGACTGCGTCTaGAACGAAGACTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: PAVSGVPAWLSAALSSCAFLDCV*NEDSSI
Trigger: AATAGAAGAGTCTTCGTTCCAGACGCAGTCCAGGAA...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTCTGGAGTGCCCGCCTaGCTTTCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSGVPA*LSAALS
Trigger: AGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGCCATCATGGACTGTaGCTTCCTCTTCAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYCHHGL*LPLQGL
Trigger: CAGGCCCTGAAGAGGAAGCCACAGTCCATGATGGCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAACAGGATGGGGTCCTaGGGGATGATGGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYNRMGS*GMMVSF
Trigger: GAAGCTGACCATCATCCCCCAGGACCCCATCCTGTT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp TCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGGCATCTGCAGTAGCGCAATCTTaGCTCACCGCAACCTCCATC +
Preference number: 4 (lower is better)
Translates to: SLGASLMPSRNKAAPVASAVAQS*LTATSI
Trigger: GATGGAGGTTGCGGTGAGCCAAGATTGCGCTACTGC...AGATGCCACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGGAATCCGTAGGAGATaGAGAACAGGCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYGIRRR*RTGRSR
Trigger: CCTACTCCTGCCTGTTCTTCATCTCCTACGGATTCC...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp TGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAATACACGTGGAGAAGCTaGCAGGGGGCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: CTTLFWACGASVRPRHLKYTWRS*QGARSH
Trigger: ATGGCTCCTGGCCCCCTGGCAGCTTCTCCACGTGTA...TTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR GCA 90 bp GATGGATTCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAATACACGTGGAGAAGCTaGCAGGGGGCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: DGFLFWACGASVRPRHLKYTWRS*QGARSH
Trigger: ATGGCTCCTGGCCCCCTGGCAGCTTCTCCACGTGTA...TTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGAATCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR GCA 90 bp ATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTGCCTGGCTCCAGAGTTCTaGTGGGAGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: ILECQRTLVAFQNDACSCLAPEF*WELFSC
Trigger: GCAGGAGAAGAGCTCCCAGCAGAACTCTGGAGCCAG...GCAAGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GGCATCTCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGTTGCTCAAAACAAAGTaGCAGGTCTGCCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: GISLGASLMPSRNKAAPVLLKTK*QVCLRT
Trigger: AGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA...CACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGAGATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTGCTCCCTGGATTTATACACGTaGAGAAGCTGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: LECQRTLVAFQNDACSCSLDLYT*RSCQGA
Trigger: GGCCCCCTGGCAGCTTCTCCACGTGTATAAATCCAG...GGAGCAAGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCTGTCTCTGGAGTGCCCGCCTaGCTTTCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PDILECQRTLVAFQNDAVSGVPA*LSAALS
Trigger: AGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGA...GACAGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACCACTGGCCTGGAGCATaGAGGAGATCATCATGGGAA +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYHWPGA*RRSSWE
Trigger: TTCCCATGATGATCTCCTCCATGCTCCAGGCCAGTG...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAATCCAGGACTGCTGTaGGACATAGGCAGTGGTGCC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDNPGLL*DIGSGA
Trigger: GGCACCACTGCCTATGTCCCACAGCAGTCCTGGATT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGCCTCTGTCACTTCGTaGGATAACCCAAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYASVTS*DNPSCR
Trigger: CCTGCAACTTGGGTTATCCCACGAAGTGACAGAGGC...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATATGGTGTGCAGCCTGTaGGCGATGGTGATCACTGTG +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDMVCSL*AMVITV
Trigger: CACAGTGATCACCATCGCCCACAGGCTGCACACCAT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTGCCTCTCTGCCACTCTaGCATCTCCTTGGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDAASLPL*HLLGGL
Trigger: GAGGCCCCCAAGGAGATGCCAGAGTGGCAGAGAGGC...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYVRIRV*NWKVPQ
Trigger: CTGTGGCACTTTCCAATTTCAGACTCTGATCCGGAC...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAGTTGGTCACATCCATaGGCTTCTGGGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSWSHP*ASGHPQ
Trigger: CTGTGGATGCCCAGAAGCTCATGGATGTGACCAACT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATACAAAAGACTTGAGGTaGGCCAGCTCCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDTKDLR*ASSKAF
Trigger: GAAGGCCTTGGAGCTGGCTCACCTCAAGTCTTTTGT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCACCTTGTCACTGTCCATaGTGGTGTGCAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSPCHCP*WCAACG
Trigger: CCCACAGGCTGCACACCATCATGGACAGTGACAAGG...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR TCA 90 bp GCAGTAGCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATCTCCCGGCTTCAAAGTaGTTCTCCTGCTTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVAQSWLTATSISRLQSDLPASK*FSCLSF
Trigger: GAAGCTTAAGCAGGAGAATCACTTTGAAGCCGGGAG...ATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGCTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp TCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGGCATCTAAACCAGGAGCCATGTaGCTAGGTAGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLGASLMPSRNKAAPVASKPGAM*LGRGLD
Trigger: ATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT...AGATGCCACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp TTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGGCCCGCCTGGCTTTCTaGAGCTCTCTCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: FINFPDILECQRTLVAFQARLAF*SSLFMC
Trigger: GCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGC...CTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAGCCACAAGTTGGCCTaGCATAATGTCCAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSHKLA*HNVQVH
Trigger: GTGAACCTGGACATTATGGCAGGCCAACTTGTGGCT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACCATGGTTATGGAGGCTaGATCTTCGGGGATCTCTTC +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYHGYGG*IFGDLF
Trigger: GAAGAGATCCCCGAAGATGCAGCCTCCATAACCATG...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGGGATAACCCAAGTTaGAGGCTGGCCACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYWDNPS*RLATKD
Trigger: GTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp GCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTTTGCTCAAAACAAAGTaGCAGGTCTGCCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: AQSWLTATSISRLQSDSPLLKTK*QVCLRT
Trigger: AGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA...AGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp ATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTGCCTGGATTTATACACGTaGAGAAGCTGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ILECQRTLVAFQNDACSCLDLYT*RSCQGA
Trigger: GGCCCCCTGGCAGCTTCTCCACGTGTATAAATCCAG...GCAAGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTAGGATCTCTTGGTCCTaGATTTATACACGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRRISWS*IYTRGE
Trigger: TTCTCCACGTGTATAAATCCAGGACCAAGAGATCCT...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCTGGAGTGCCCGCCTaGCTTTCTGCAGCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLSGVPA*LSAALS
Trigger: AGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGA...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACATCACAGCCACAAGTTaGCCTGCCATAATGTCCAGG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYITATS*PAIMSR
Trigger: CCTGGACATTATGGCAGGCCAACTTGTGGCTGTGAT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGGGTGTCATCCACTGTaGAAATATCGCCGGCAAACC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDGCHPL*KYRRQT
Trigger: GGTTTGCCGGCGATATTTCCACAGTGGATGACACCC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTCTTATTCTGGGCTTGTaGCGCCTCCGTGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: TTLFWACGASVRPRHLKVLILGL*RLRETQ
Trigger: CTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAG...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp ATGGTCTGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATTGTACTACCTTATTCTaGGCTTGTGGCGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: MVCTTLFWACGASVRPRHCTTLF*ACGASV
Trigger: CACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACA...ATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACAGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp CAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCTCTTCCTCCTCAAACACTaGCTGCCTCTCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: QGHLGFDSDSCSSQAAWLFLLKH*LPLCHS
Trigger: AGAGTGGCAGAGAGGCAGCCAGTGTTTGAGGAGGAA...GAGCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAGCAATTTCAGCAGCTaGGGACTCACAAACGTGAAG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSNFSS*GLTNVK
Trigger: CTTCACGTTTGTGAGTCCTCAGCTGCTGAAATTGCT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTTCTCCCAGCATGGCTaGTATCAAGGAGGATTTCCC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDFSQHG*YQGGFP
Trigger: GGGAAATCCTCCTTGATATCAGCCATGCTGGGAGAA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCATGGCCACAAAAGACTTaGGGTGAGCCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSWPQKT*GEPAPR
Trigger: CCTTGGAGCTGGCTCACCTCAAGTCTTTTGTGGCCA...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGGATGGTCGTCTGAATaGGGTTGTCTGTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYGWSSE*GCLSLD
Trigger: ATCTAGAGACAGACAACCTCATTCAGACGACCATCC...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGCCTGTGGGCGATGGTaGTCACTGTGCAGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRACGRW*SLCSGR
Trigger: TCGCCCACTGCACAGTGATCACCATCGCCCACAGGC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp GACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTCCTTGGGGGCCTCCTTaGTGCCCTCAAGAAATAAAG +
Preference number: 4 (lower is better)
Translates to: DILECQRTLVAFQNDACSPWGPP*CPQEIK
Trigger: CTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGG...AGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAGAAGTCACCCAAGATaGACTTCCAGTTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYRSHPR*TSSFPL
Trigger: GAGGGGAAAACTGGAAGTTCATCTTGGGTGACTTCT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR GCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAAACAAAGTGGCAGGTCTaGCTCCGGACTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSETKWQV*LRTVQE
Trigger: TTCCTGGACAGTCCGGAGGCAGACCTGCCACTTTGT...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTTCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRSEIGK*HRVSRE
Trigger: TTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGA...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTCTGGCTCCAGAGTTCTaGTGGGAGCTCTTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDALAPEF*WELFSC
Trigger: GCAGGAGAAGAGCTCCCAGCAGAACTCTGGAGCCAG...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTACAGGTTTGCACCACTaGACACGGCTTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AQSWLTATSISRLQSDSPTGLHH*TRLLVL
Trigger: AAGAACAAGAAGCCGTGTGCAGTGGTGCAAACCTGT...AGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTCTGGATTTATACACGTaGAGAAGCTGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TTLFWACGASVRPRHLKVLDLYT*RSCQGA
Trigger: GGCCCCCTGGCAGCTTCTCCACGTGTATAAATCCAG...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp CCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCTGTCGAACAGCAGGGACTGTaGCTTGTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PDILECQRTLVAFQNDAVEQQGL*LVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTC...GACAGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp GCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AQSWLTATSISRLQSDSPGRGLD*YIEQQG
Trigger: TCCCTGCTGTTCGATATACCAATCCAAGCCTCTACC...AGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATCCTTCCTGGCCAAGTTaGATAGGGTCAATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDPSWPS*IGSMPS
Trigger: AGAAGGCATTGACCCTATCCAACTTGGCCAGGAAGG...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTCTTCACTGCCATCATaGACTGTGGCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSSLPS*TVASSS
Trigger: TGAAGAGGAAGCCACAGTCCATGATGGCAGTGAAGA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAAAGAACTTCTCCAGCATaGTTCCTGGACTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSERTSPA*FLDCVW
Trigger: CCAGACGCAGTCCAGGAATCATGCTGGAGAAGTTCT...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCAGAACTTCTCCAGCATaGTTCCTGGACTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSRTSPA*FLDCVW
Trigger: CCAGACGCAGTCCAGGAATCATGCTGGAGAAGTTCT...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGTCCAGAGTCTTCTGTaGGTACAAGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LPGQGHLGFDSDSCSSQAVQSLL*VQGPAL
Trigger: TAGAGCTGGCCCTTGTACTCACAGAAGACTCTGGAC...TGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGTAGCCTTTCAGAATaGTGCTGTCATACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYCSLSE*CCHTSC
Trigger: ACAGCTGGTATGACAGCATCATTCTGAAAGGCTACA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGGATGGTCGTCTGAATaGGGTTGTCTGTCTCTAGAT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDGWSSE*GCLSLD
Trigger: ATCTAGAGACAGACAACCTCATTCAGACGACCATCC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAACCTTGGGGGCCTCCTTaGTGCCCTCAAGAAATAAAG +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSEPWGPP*CPQEIK
Trigger: CTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGG...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp AACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCGCCCGCCTGGCTTTCTaGAGCTCTCTCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: NIFQDKGILALTLILVQAARLAF*SSLFMC
Trigger: GCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGC...GGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATCATGTCCCTCTGAGATaGTGGATAGTCGGTGCTATT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDHVPLR*WIVGAI
Trigger: AATAGCACCGACTATCCAGCATCTCAGAGGGACATG...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCAGTTTTCCCCTCAGGTTaGCACCAGCCTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSVFPSG*HQPLSL
Trigger: AAGTGACAGAGGCTGGTGGCAACCTGAGGGGAAAAC...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCACTCCAGCATGATTCCTaGACTGCGTCTGGAACGAAG +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSLQHDS*TASGTK
Trigger: CTTCGTTCCAGACGCAGTCCAGGAATCATGCTGGAG...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTCTCCAGCATGATTCCTaGACTGCGTCTGGAACGAAG +
Preference number: 4 (lower is better)
Translates to: TTLFWACGASVRPRHLKVLQHDS*TASGTK
Trigger: CTTCGTTCCAGACGCAGTCCAGGAATCATGCTGGAG...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAACTCCAGCATGATTCCTaGACTGCGTCTGGAACGAAG +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSELQHDS*TASGTK
Trigger: CTTCGTTCCAGACGCAGTCCAGGAATCATGCTGGAG...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: PAVSGVPAWLSAALSSCACSLMS*FSSLHQ
Trigger: TTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGCAGTCATGTCGAATaGCAGATGTGTCCAAGTCAT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYCSHVE*QMCPSH
Trigger: ATGACTTGGACACATCTGCCATTCGACATGACTGCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATATGGTGATGTGCCCGTaGACATTTTCCATTTCTCCC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDMVMCP*TFSISP
Trigger: GGGAGAAATGGAAAATGTCCACGGGCACATCACCAT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGGTACTCCAGGTAGATaGAGAACTTCACCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDGTPGR*RTSPFQ
Trigger: CTGGAAAGGTGAAGTTCTCCATCTACCTGGAGTACC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAACACAAATATACCTTaGGCTAATCCCAGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYNTNIP*ANPRAP
Trigger: CGGAGCTCTGGGATTAGCCCAAGGTATATTTGTGTT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGATGGATTCTTATTCTaGGCTTGTGGCGCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LPGQGHLGFDSDSCSSQADGFLF*ACGASV
Trigger: CACGGAGGCGCCACAAGCCCAGAATAAGAATCCATC...TGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTCAGGAATGAAGCTATaGATGATGGATTCTTATTCT +
Preference number: 4 (lower is better)
Translates to: PAVSGVPAWLSAALSSCASGMKL*MMDSYS
Trigger: AGAATAAGAATCCATCATCCATAGCTTCATTCCTGA...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR TCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTGTCCAGAGTCTTCTGTaGGTACAAGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDAVQSLL*VQGPAL
Trigger: TAGAGCTGGCCCTTGTACTCACAGAAGACTCTGGAC...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCTGTCATACCAGCTGTAGGTGTCCAGAGTCTTCTGTaGGTACAAGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: CQRTLVAFQNDAVIPAVGVQSLL*VQGPAL
Trigger: TAGAGCTGGCCCTTGTACTCACAGAAGACTCTGGAC...ACCTACAGCTGGTATGACAGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR TCA 90 bp TGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: CTTLFWACGASVRPRHLKVRIRV*NWKVPQ
Trigger: CTGTGGCACTTTCCAATTTCAGACTCTGATCCGGAC...TTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR TCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAAGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSEVRIRV*NWKVPQ
Trigger: CTGTGGCACTTTCCAATTTCAGACTCTGATCCGGAC...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTGGAATCCGTAGGAGATaGAGAACAGGCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDAGIRRR*RTGRSR
Trigger: CCTACTCCTGCCTGTTCTTCATCTCCTACGGATTCC...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CTGCTGTGGCCATTAGGGAACATATTAAACAGGGGGTGGCCAAAGTGCTGTAATACAAAAGACTTGAGGTaGGCCAGCTCCAAGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLWPLGNILNRGWPKCCNTKDLR*ASSKAF
Trigger: GAAGGCCTTGGAGCTGGCTCACCTCAAGTCTTTTGT...ATTACAGCACTTTGGCCACCCCCTGTTTAATATGTTCCCTAATGGCCACAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR GCA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGAACAAAGTGGCAGGTCTaGCTCCGGACTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGTKWQV*LRTVQE
Trigger: TTCCTGGACAGTCCGGAGGCAGACCTGCCACTTTGT...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp TTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGTACACGTGGAGAAGCTaGCAGGGGGCCAGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LLTNVLVFISSSTSQTSSYTWRS*QGARSH
Trigger: ATGGCTCCTGGCCCCCTGGCAGCTTCTCCACGTGTA...CGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAAAAACCAGGAGCCATGTaGCTAGGTAGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: HQLPRHPRVSEDACSLSEKPGAM*LGRGLD
Trigger: ATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp TCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGGCATCTAGGATCTCTTGGTCCTaGATTTATACACGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: SLGASLMPSRNKAAPVASRISWS*IYTRGE
Trigger: TTCTCCACGTGTATAAATCCAGGACCAAGAGATCCT...AGATGCCACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCCATTGTCTGCTGTATTaGATCAGCAAAACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: DKGILALTLILVQARQPGHCLLY*ISKTRS
Trigger: GCTCCTGGTTTTGCTGATCCAATACAGCAGACAATG...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTGCTCCCATTGTCTGCTGTATTaGATCAGCAAAACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LECQRTLVAFQNDACSCSHCLLY*ISKTRS
Trigger: GCTCCTGGTTTTGCTGATCCAATACAGCAGACAATG...GGAGCAAGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp TTTCAACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCATCAAGCCAGGCAGCCTaGCTCCAGAGTTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FQHLPGQGHLGFDSDSCSSSQAA*LQSSAG
Trigger: CCCAGCAGAACTCTGGAGCCAGGCTGCCTGGCTTGA...TGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATATCAAGCCAGGCAGCCTaGCTCCAGAGTTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ACGASVRPRHLKVIFIKISSQAA*LQSSAG
Trigger: CCCAGCAGAACTCTGGAGCCAGGCTGCCTGGCTTGA...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGAACAGGATGGGGTCCTaGGGGATGATGGTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVHILNASFLSHKVKGSRNRMGS*GMMVSF
Trigger: GAAGCTGACCATCATCCCCCAGGACCCCATCCTGTT...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGCCAGGACCAGGATCTTaGATTTCCGAAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: AVHILNASFLSHKVKGSRPGPGS*ISEAEP
Trigger: GGGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGG...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTCCTTTTCTAACCCATaGGGCCTTCTGCTAGAATTT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSFSNP*GLLLEF
Trigger: AAATTCTAGCAGAAGGCCCCATGGGTTAGAAAAGGA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGTGTCCCTGGGAGGGGTaGGTAGCAAGGAAGTACGAT +
Preference number: 4 (lower is better)
Translates to: AVHILNASFLSHKVKGSRCPWEG*VARKYD
Trigger: ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACA...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGCTCTTTCCTGCTGTaGCCATTAGGGAACATATTA +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYCSFLL*PLGNIL
Trigger: TAATATGTTCCCTAATGGCCACAGCAGGAAAGAGCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR TCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCGTCCAGAGTCTTCTGTaGGTACAAGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFVQSLL*VQGPAL
Trigger: TAGAGCTGGCCCTTGTACTCACAGAAGACTCTGGAC...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCGGAATCCGTAGGAGATaGAGAACAGGCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFGIRRR*RTGRSR
Trigger: CCTACTCCTGCCTGTTCTTCATCTCCTACGGATTCC...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTCCCGGCTTCAAAGTaGTTCTCCTGCTTAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LGFHLFINFPDILECQRTLPASK*FSCLSF
Trigger: GAAGCTTAAGCAGGAGAATCACTTTGAAGCCGGGAG...CGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGACAAAGTGGCAGGTCTaGCTCCGGACTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRTKWQV*LRTVQE
Trigger: TTCCTGGACAGTCCGGAGGCAGACCTGCCACTTTGT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GCAGTAGCGCAATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATGTACACACCATTGTCTaGTGTATTGGATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: AVAQSWLTATSISRLQSDVHTIV*CIGSAK
Trigger: TTTTGCTGATCCAATACAGCAGACAATGGTGTGTAC...ATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATTGCGCTACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp GGCATCTCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGTGTGCGTTTCAAACTTaGTCACTAATGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GISLGASLMPSRNKAAPVCAFQT*SLMSWF
Trigger: AAACCAAGACATTAGTGAGCAAGTTTGAAACGCACA...CACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGAGATGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTGTGTCACGGTCACTTaGAAAGGAGATCAGCAATTT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDCVTVT*KGDQQF
Trigger: AAATTGCTGATCTCCTTTGCAAGTGACCGTGACACA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGACTGGATCTTGCCTTTaGTGGGCCAATCTGGCGGAG +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRTGSCL*WANLAE
Trigger: CTCCGCCAGATTGGCCCAGCAAAGGCAAGATCCAGT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp TTTCAACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCACACTGGCTGCCTCTCTaGCACTCTGGCATCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FQHLPGQGHLGFDSDSCSHWLPL*HSGISL
Trigger: CAAGGAGATGCCAGAGTGGCAGAGAGGCAGCCAGTG...TGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649493.1
CDS-3UTR GCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAAATGATGCCTGCTCTTaGTCCTTCCTCCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSNDACS*SFLLKH
Trigger: GTGTTTGAGGAGGAAGGAGCAAGAGCAGGCATCATT...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCATTTCAGAATGATGCCTaGTCTTGCTCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSFQNDA*SCSFLL
Trigger: GAGGAGGAAGGAGCAAGAGCAGGCATCATTCTGAAA...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTTGCTCAAAACAAAGTaGCAGGTCTGCCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDALLKTK*QVCLRT
Trigger: AGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp ATGGTCTGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATAGGATCTCTTGGTCCTaGATTTATACACGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: MVCTTLFWACGASVRPRHRISWS*IYTRGE
Trigger: TTCTCCACGTGTATAAATCCAGGACCAAGAGATCCT...ATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACAGACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCGAACAGCAGGGACTGTaGCTTGTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFEQQGL*LVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTC...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGCTCTGTGGAAACACTaGCCTGGAGCATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRALWKH*PGAWRR
Trigger: TCTCCTCCATGCTCCAGGCCAGTGTTTCCACAGAGC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAGACACATTTCTGGTTaGTGTCAATCCTCACCTCAT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDRHISG*CQSSPH
Trigger: ATGAGGTGAGGATTGACACCAACCAGAAATGTGTCT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGGGTAGTAGGTTCATaGGTGTTCACTTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYWVVGS*VFTYPF
Trigger: AAAAGGATAAGTGAACACCCATGAACCTACTACCCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTGTCCCTGGGAGGGGTaGGTAGCAAGGAAGTACGAT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRCPWEG*VARKYD
Trigger: ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGACTTATTCTGGGCTTGTaGCGCCTCCGTGAGACCCAG +
Preference number: 4 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRLILGL*RLRETQ
Trigger: CTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAG...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACATATTAAACAGGGGGTaGCCAAAGTGCTGTAATTCT +
Preference number: 4 (lower is better)
Translates to: REIQDSGCPWEGWVARKYILNRG*PKCCNS
Trigger: AGAATTACAGCACTTTGGCCACCCCCTGTTTAATAT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648523.1
3UTR CAA 72 bp AGTTCTTCAGGGCTGCCGCACTCTATAATCTTCCCGTaGTCTAGGACCATTACCTTGTCACTGTCCATGATG +
Preference number: 4 (lower is better)
Translates to: SSSGLPHSIIFP*SRTITLSLSMM
Trigger: CATCATGGACAGTGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR TCA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCGGACTGTCCAGGAATaGGGAATTCCAAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSRTVQE*GIPKSR
Trigger: TCTACTTTTTGGAATTCCTCATTCCTGGACAGTCCG...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCACGGACTGTCCAGGAATaGGGAATTCCAAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSRTVQE*GIPKSR
Trigger: TCTACTTTTTGGAATTCCTCATTCCTGGACAGTCCG...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCATGTAGCCTTTCAGAATaGTGCTGTCATACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSCSLSE*CCHTSC
Trigger: ACAGCTGGTATGACAGCATCATTCTGAAAGGCTACA...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR TCA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATACTTGTGGCGCCTCCGTaGGACCCAGACATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: ACGASVRPRHLKVIFIKILVAPP*DPDILK
Trigger: CTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAG...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATAACAAAGTGGCAGGTCTaGCTCCGGACTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: ACGASVRPRHLKVIFIKITKWQV*LRTVQE
Trigger: TTCCTGGACAGTCCGGAGGCAGACCTGCCACTTTGT...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR GCA 90 bp TTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAACCAGGAGCCATGTaGCTAGGTAGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: FWACGASVRPRHLKVIFIKPGAM*LGRGLD
Trigger: ATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT...AATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR GCA 90 bp ATGGTCTGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATGTACACACCATTGTCTaGTGTATTGGATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MVCTTLFWACGASVRPRHVHTIV*CIGSAK
Trigger: TTTTGCTGATCCAATACAGCAGACAATGGTGTGTAC...ATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGGTGAAGGCCTTTTGTaGATCCAAAATATTGTTGCT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDGEGLL*IQNIVA
Trigger: AGCAACAATATTTTGGATGCACAAAAGGCCTTCACC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTTTCCTGGACTGCGTCTaGAACGAAGACTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: TTLFWACGASVRPRHLKVFLDCV*NEDSSI
Trigger: AATAGAAGAGTCTTCGTTCCAGACGCAGTCCAGGAA...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCTTGCTCAAAACAAAGTaGCAGGTCTGCCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFLLKTK*QVCLRT
Trigger: AGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTAGGATCTCTTGGTCCTaGATTTATACACGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: DILECQRTLVAFQNDACSRISWS*IYTRGE
Trigger: TTCTCCACGTGTATAAATCCAGGACCAAGAGATCCT...AGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTCATTGTCTGCTGTATTaGATCAGCAAAACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: TTLFWACGASVRPRHLKVHCLLY*ISKTRS
Trigger: GCTCCTGGTTTTGCTGATCCAATACAGCAGACAATG...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CCA 90 bp TTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGCATTGTCTGCTGTATTaGATCAGCAAAACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: FINFPDILECQRTLVAFQHCLLY*ISKTRS
Trigger: GCTCCTGGTTTTGCTGATCCAATACAGCAGACAATG...CTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGTGGAAACACTGGCCTaGAGCATGGAGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRVETLA*SMEEII
Trigger: GATGATCTCCTCCATGCTCCAGGCCAGTGTTTCCAC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAGCAATGTTTTCAGTTaGCATTACCAGTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSNVFS*HYQFGI
Trigger: GATGCCAAACTGGTAATGCCAACTGAAAACATTGCT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTATAAAGCAGCCCCTGTaGCATCTTTGTTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: DILECQRTLVAFQNDACSIKQPL*HLCFWC
Trigger: ACACCAAAAACAAAGATGCCACAGGGGCTGCTTTAT...AGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATAAGAACTTCTCCAGCATaGTTCCTGGACTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: ACGASVRPRHLKVIFIKIRTSPA*FLDCVW
Trigger: CCAGACGCAGTCCAGGAATCATGCTGGAGAAGTTCT...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCTGTCATACCAGCTGTAGGTCGGACTGTCCAGGAATaGGGAATTCCAAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: CQRTLVAFQNDAVIPAVGRTVQE*GIPKSR
Trigger: TCTACTTTTTGGAATTCCTCATTCCTGGACAGTCCG...ACCTACAGCTGGTATGACAGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGATAACTGGCAAACCTaGTACGGTCTCGCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRDNWQT*YGLAEV
Trigger: CACTTCAGCGAGACCGTATCAGGTTTGCCAGTTATC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGAAACCAGGAGCCATGTaGCTAGGTAGAGGCTTGGAT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRKPGAM*LGRGLD
Trigger: ATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACTGCCGTCTCTGGAGTaGCCGCCTGGCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTLPSLE*PPGFLQ
Trigger: CTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGTCATAGAAGATGTATaGAGTATGAGTCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDVIEDV*SMSQSI
Trigger: AATGGACTGACTCATACTGCATACATCTTCTATGAC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp TGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTTCCTGGACTGCGTCTaGAACGAAGACTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: WFSSLHQLPRHPRVSEDAFLDCV*NEDSSI
Trigger: AATAGAAGAGTCTTCGTTCCAGACGCAGTCCAGGAA...AGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp AACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCCTGGATTTATACACGTaGAGAAGCTGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: NLLTNVLVFISSSTSQTSLDLYT*RSCQGA
Trigger: GGCCCCCTGGCAGCTTCTCCACGTGTATAAATCCAG...GGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAACAGCAGGGACTGTaGCTTGTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LMSWFSSLHQLPRHPRVSEQQGL*LVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTC...TGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGAGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGGRGLD*YIEQQG
Trigger: TCCCTGCTGTTCGATATACCAATCCAAGCCTCTACC...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFGRGLD*YIEQQG
Trigger: TCCCTGCTGTTCGATATACCAATCCAAGCCTCTACC...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CCA 90 bp TCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGGCATCTTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SLGASLMPSRNKAAPVASCSLMS*FSSLHQ
Trigger: TTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA...AGATGCCACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGACATCCATGAGCTTCTaGGCATCCACAGACATCAGG +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRTSMSF*ASTDIR
Trigger: CCTGATGTCTGTGGATGCCCAGAAGCTCATGGATGT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp TGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGATTCCTCCTCAAACACTaGCTGCCTCTCTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: CSLMSWFSSLHQLPRHPRFLLKH*LPLCHS
Trigger: AGAGTGGCAGAGAGGCAGCCAGTGTTTGAGGAGGAA...TCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR TCA 90 bp TTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTCGGACTGTCCAGGAATaGGGAATTCCAAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: FWACGASVRPRHLKVIFIRTVQE*GIPKSR
Trigger: TCTACTTTTTGGAATTCCTCATTCCTGGACAGTCCG...AATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAG +
Preference number: 4 (lower is better)
Translates to: CSLMSWFSSLHQLPRHPRVRIRV*NWKVPQ
Trigger: CTGTGGCACTTTCCAATTTCAGACTCTGATCCGGAC...TCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCGTTCTCCGTAAAGGATaGCCTTTCATCCCAACCATT +
Preference number: 4 (lower is better)
Translates to: LFWACGASVRPRHLKVIFVLRKG*PFIPTI
Trigger: AATGGTTGGGATGAAAGGTCATCCTTTACGGAGAAC...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACAGCTGCGCAAGGACTaGGGCAGGGTGTCATCCACT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRQLRKD*GRVSST
Trigger: AGTGGATGACACCCTGCCTCAGTCCTTGCGCAGCTG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATGGGGTCCTGGGGGATaGTGGTCAGCTTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTWGPGG*WSASLG
Trigger: TCCGAGAGAAGCTGACCATCATCCCCCAGGACCCCA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTGGGGTCCTGGGGGATaGTGGTCAGCTTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYWGPGG*WSASLG
Trigger: TCCGAGAGAAGCTGACCATCATCCCCCAGGACCCCA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR GCA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCGTACACACCATTGTCTaGTGTATTGGATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSVHTIV*CIGSAK
Trigger: TTTTGCTGATCCAATACAGCAGACAATGGTGTGTAC...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp TGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAATCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: CTTLFWACGASVRPRHLKSEIGK*HRVSRE
Trigger: TTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGA...TTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR GCA 90 bp TTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGTCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: FINFPDILECQRTLVAFQSEIGK*HRVSRE
Trigger: TTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGA...CTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAATAATGCACCTATTTaGATCACCATGGATGAATCT +
Preference number: 4 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDNNAPI*ITMDES
Trigger: AGATTCATCCATGGTGATGCAAATAGGTGCATTATT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATCAAGCCAGGCAGCCTaGCTCCAGAGTTCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRSSQAA*LQSSAG
Trigger: CCCAGCAGAACTCTGGAGCCAGGCTGCCTGGCTTGA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGGATCTTGCCTTTGCTaGGCCAATCTGGCGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRGSCLC*ANLAEA
Trigger: GGCCTCCGCCAGATTGGCCCAGCAAAGGCAAGATCC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCATGGGTAGTAGGTTCATaGGTGTTCACTTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSWVVGS*VFTYPF
Trigger: AAAAGGATAAGTGAACACCCATGAACCTACTACCCA...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGACAGTGGTTGTCCCTaGGAGGGGTGGGTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYDSGCP*EGWVAR
Trigger: CCTTGCTACCCACCCCTCCCAGGGACAACCACTGTC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATAGAACTTCTCCAGCATaGTTCCTGGACTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: QTCSLMSWFSSLHQLPRHRTSPA*FLDCVW
Trigger: CCAGACGCAGTCCAGGAATCATGCTGGAGAAGTTCT...ATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGTTCTCCGTAAAGGATaGCCTTTCATCCCAACCATT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRVLRKG*PFIPTI
Trigger: AATGGTTGGGATGAAAGGTCATCCTTTACGGAGAAC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTTTGTACTTGGTCTCTaGATGAAGGTTCCCAGGCAA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRFVLGL*MKVPRQ
Trigger: TTGCCTGGGAACCTTCATTCAGAGACCAAGTACAAA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAGATTGGGGACCTGGTaGCAGAGTCCAGACGCCTCA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYRLGTW*QSPDAS
Trigger: TGAGGCGTCTGGACTCTGTCACCAGGTCCCCAATCT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGCATCTGAGTAGTTGTTaGAAGGGTCGAGATTCATCC +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRHLSSC*KGRDSS
Trigger: GGATGAATCTCGACCCTTTCAACAACTACTCAGATG...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGCCAAATCTCCTCATCTaGGTAGTTGTTGAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRPNLLI*VVVERV
Trigger: GACCCTTTCAACAACTACTCAGATGAGGAGATTTGG...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCCTTGTCACTGTCCATaGTGGTGTGCAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYPCHCP*WCAACG
Trigger: CCCACAGGCTGCACACCATCATGGACAGTGACAAGG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp GCTGTTCACATTCTCAATGCCAGCTTCCTTAGCCATAAAGTAAAAGGGTCCAGGAATTTCTGCAGGAGATaGGAAGTCACCCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: AVHILNASFLSHKVKGSRNFCRR*EVTQDE
Trigger: TTCATCTTGGGTGACTTCTCATCTCCTGCAGAAATT...CCTGGACCCTTTTACTTTATGGCTAAGGAAGCTGGCATTGAGAATGTGAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGCCCGCCTGGCTTTCTaGAGCTCTCTCTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYARLAF*SSLFMC
Trigger: GCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGATCAGTCACCCAGGGTaGCTCATTTTCCACTTTTGT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRISHPG*LIFHFC
Trigger: ACAAAAGTGGAAAATGAGGCACCCTGGGTGACTGAT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp TTTCAACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCATTTCAGAATGATGCCTaGTCTTGCTCCTTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: FQHLPGQGHLGFDSDSCSFQNDA*SCSFLL
Trigger: GAGGAGGAAGGAGCAAGAGCAGGCATCATTCTGAAA...TGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649493.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCCCAGGCACAGCAGCTaGCTCTGGCCTATGCTAACA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYPRHSS*LWPMLT
Trigger: TGTTAGCATAGGCCAGAGGCAGCTGCTGTGCCTGGG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CCA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRGRGLD*YIEQQG
Trigger: TCCCTGCTGTTCGATATACCAATCCAAGCCTCTACC...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGGATGTTGTCCTTTATaGTGCCATTCTGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRGCCPL*CHSESR
Trigger: CCTGGATTCAGAATGGCACCATAAAGGACAACATCC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp TTTCAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGAGGAATCCGTAGGAGATaGAGAACAGGCAGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: FQTCSLMSWFSSLHQLPRGIRRR*RTGRSR
Trigger: CCTACTCCTGCCTGTTCTTCATCTCCTACGGATTCC...TCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAGGCCAGCAGGTTCTTaGGCTCTTTCTTCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYRPAGS*ALSSGG
Trigger: ACCTCCGGAAGAAAGAGCTCAAGAACCTGCTGGCCT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCACTGGTCCAAGCACTaGGCCAGAGGTTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYHWSKH*ARGWIQ
Trigger: TTGGATCCAACCTCTGGCTCAGTGCTTGGACCAGTG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATGGCCACAAAAGACTTaGGGTGAGCCAGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTWPQKT*GEPAPR
Trigger: CCTTGGAGCTGGCTCACCTCAAGTCTTTTGTGGCCA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp AACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCGTACACACCATTGTCTaGTGTATTGGATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: NIFQDKGILALTLILVQAVHTIV*CIGSAK
Trigger: TTTTGCTGATCCAATACAGCAGACAATGGTGTGTAC...GGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CAACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCTCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: QHLPGQGHLGFDSDSCSSSEIGK*HRVSRE
Trigger: TTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGA...GCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACAGCTCCAGGCGAATTaGAAGCCACCTGTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRQLQAN*KPPVGG
Trigger: ACCTCCAACAGGTGGCTTGCAATTCGCCTGGAGCTG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGGCCTATGCTCAGGTTaGCACCAGCCTCTGTCACTT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRGLCSG*HQPLSL
Trigger: AAGTGACAGAGGCTGGTGGCAACCTGAGCATAGGCC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp TTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGTTCCTGGACTGCGTCTaGAACGAAGACTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: LLTNVLVFISSSTSQTSSFLDCV*NEDSSI
Trigger: AATAGAAGAGTCTTCGTTCCAGACGCAGTCCAGGAA...CGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACTGGATTTATACACGTaGAGAAGCTGCCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTLDLYT*RSCQGA
Trigger: GGCCCCCTGGCAGCTTCTCCACGTGTATAAATCCAG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCATCAGGAATGAAGCTATaGATGATGGATTATTTGATG +
Preference number: 4 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSSGMKL*MMDYLM
Trigger: CATCAAATAATCCATCATCCATAGCTTCATTCCTGA...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACCAGGACCAGGATCTTaGATTTCCGAAGCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTPGPGS*ISEAEP
Trigger: GGGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTCCTTTTCTAACCCATaGGGCCTTCTGCTAGAATTT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRSFSNP*GLLLEF
Trigger: AAATTCTAGCAGAAGGCCCCATGGGTTAGAAAAGGA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAAGAACTTCTCCAGCATaGTTCCTGGACTGCGTCTGG +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRRTSPA*FLDCVW
Trigger: CCAGACGCAGTCCAGGAATCATGCTGGAGAAGTTCT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGTCCAGAGTCTTCTGTaGGTACAAGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYVQSLL*VQGPAL
Trigger: TAGAGCTGGCCCTTGTACTCACAGAAGACTCTGGAC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACTGATACGGTCTCGCTaGAGTGAGAGTAGATTGGGG +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRLIRSR*SESRLG
Trigger: CCCCAATCTACTCTCACTTCAGCGAGACCGTATCAG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGCAGTTTGTGAGGGATaGCTTTCCAGCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRAVCEG*LSSSCP
Trigger: AGGACAGGAGCTGGAAAGTCATCCCTCACAAACTGC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGTACACACCATTGTCTaGTGTATTGGATCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRVHTIV*CIGSAK
Trigger: TTTTGCTGATCCAATACAGCAGACAATGGTGTGTAC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATCATCATGGGAAGCATaGTCAGGGGAAAGCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRSSWEA*SGESAG
Trigger: TCCTGCGCTTTCCCCTGAGCATGCTTCCCATGATGA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATACAGGTTTGCACCACTaGACACGGCTTCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QTCSLMSWFSSLHQLPRHTGLHH*TRLLVL
Trigger: AAGAACAAGAAGCCGTGTGCAGTGGTGCAAACCTGT...ATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR GCA 90 bp CAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATAATGATGCCTGCTCTTaGTCCTTCCTCCTCAAACAC +
Preference number: 4 (lower is better)
Translates to: QTCSLMSWFSSLHQLPRHNDACS*SFLLKH
Trigger: GTGTTTGAGGAGGAAGGAGCAAGAGCAGGCATCATT...ATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCTCCAGCATGATTCCTaGACTGCGTCTGGAACGAAG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYLQHDS*TASGTK
Trigger: CTTCGTTCCAGACGCAGTCCAGGAATCATGCTGGAG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGAACAGCAGGGACTGTaGCTTGTCCAGAGTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYEQQGL*LVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp TGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCTGTCATACCAGCTGTAGGTTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: CQRTLVAFQNDAVIPAVGCSLMS*FSSLHQ
Trigger: TTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA...ACCTACAGCTGGTATGACAGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCGGTGTACTCCTTCCTaGCCAAGTTGGATAGGGTCA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYRCTPS*PSWIGS
Trigger: TGACCCTATCCAACTTGGCCAGGAAGGAGTACACCG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTATAAAGCAGCCCCTGTaGCATCTTTGTTTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LTNVLVFISSSTSQTSSSIKQPL*HLCFWC
Trigger: ACACCAAAAACAAAGATGCCACAGGGGCTGCTTTAT...ACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
3UTR CAA 72 bp GCTTTCTGCAGCTCTCTCTTCATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTTTTCATCTCTTCATCA +
Preference number: 4 (lower is better)
Translates to: AFCSSLFMCVSN*LTNVLVFISSS
Trigger: TGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAACGCACATGAAGAGAGAGCTGCAGAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR TCA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATAAGATGCATGTTACATTaGAACAGTGGATGGACATGT +
Preference number: 4 (lower is better)
Translates to: ACGASVRPRHLKVIFIKIRCMLH*NSGWTC
Trigger: ACATGTCCATCCACTGTTTCAATGTAACATGCATCT...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTTCATATTTTTGACCTaGATGGTCTTACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRFIFLT*MVLLLV
Trigger: CACCAAGAGTAAGACCATTCAGGTCAAAAATATGAA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATTTATGGTGCCATTCTaGATCCAGGACTGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTFMVPF*IQDCCG
Trigger: CCCACAGCAGTCCTGGATTCAGAATGGCACCATAAA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACCATCAATGATAATCTaGCCACCGGCAGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRPSMII*PPAASK
Trigger: CTTAGAGGCTGCCGGTGGTCAGATTATCATTGATGG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGAATGCCCCAGAAACATaGAAATATATTCATCCCCAA +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRNAPET*KYIHPQ
Trigger: TTGGGGATGAATATATTTTCATGTTTCTGGGGCATT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTGTTTCAGAAATCGCTaGTGGTGCTCAAAGGCACGG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYCFRNR*WCSKAR
Trigger: CCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATGGGATAACCCAAGTTaGAGGCTGGCCACAAAAGAC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTWDNPS*RLATKD
Trigger: GTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCCA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGGTCATAGAAGATGTATaGAGTATGAGTCAGTCCATT +
Preference number: 4 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRVIEDV*SMSQSI
Trigger: AATGGACTGACTCATACTGCATACATCTTCTATGAC...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATTGCTCAAAACAAAGTaGCAGGTCTGCCTCCGGACT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRLLKTK*QVCLRT
Trigger: AGTCCGGAGGCAGACCTGCCACTTTGTTTTGAGCAA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATGGAGGAGATCATCATaGGAAGCATGCTCAGGGGAA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRWRRSS*EACSGE
Trigger: TTCCCCTGAGCATGCTTCCCATGATGATCTCCTCCA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATCACATCTCGGACTGTaGCTTCCGAATCATGTTCCC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTSHLGL*LPNHVP
Trigger: GGGAACATGATTCGGAAGCCACAGTCCGAGATGTGA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACTCTTCTCATGGTTATaGAGGCTGCATCTTCGGGGA +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTLFSWL*RLHLRG
Trigger: TCCCCGAAGATGCAGCCTCCATAACCATGAGAAGAG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATTCTCTCGGAGGTCGTaGAGCCCAATGGAAGCAATA +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTFSRRS*SPMEAI
Trigger: TATTGCTTCCATTGGGCTCCACGACCTCCGAGAGAA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGTGATCACTGTGCAGTaGGCGAACTCGTTTTGGATG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYVITVQ*ANSFWM
Trigger: CATCCAAAACGAGTTCGCCCACTGCACAGTGATCAC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR GCA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGATGTGCGTTTCAAACTTaGTCACTAATGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRCAFQT*SLMSWF
Trigger: AAACCAAGACATTAGTGAGCAAGTTTGAAACGCACA...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCTTGACCACAGCATGTaGATGAAGTTGGTCACATCC +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYLDHSM*MKLVTS
Trigger: GGATGTGACCAACTTCATGCACATGCTGTGGTCAAG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACCCTTGATGGTGATGTaGCCGTGGACATTTTCCATT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRPLMVM*PWTFSI
Trigger: AATGGAAAATGTCCACGGGCACATCACCATCAAGGG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACGTCTTCTTCTTCACTaGCATCATGGACTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTRLLLH*HHGLWL
Trigger: AAGCCACAGTCCATGATGGCAGTGAAGAAGAAGACG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAAGAAATCGCTGCTGGTaGTCAAAGGCACGGATAACT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRRNRCW*SKARIT
Trigger: AGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRGRGLD*YIEQQG
Trigger: TCCCTGCTGTTCGATATACCAATCCAAGCCTCTACC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGTCCCTCTGAGATGCTaGATAGTCGGTGCTATTGAA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRVPLRC*IVGAIE
Trigger: TTCAATAGCACCGACTATCCAGCATCTCAGAGGGAC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATTCAGAAATCGCTGCTaGTGCTCAAAGGCACGGATA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRFRNRC*CSKARI
Trigger: TATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGGTCGTGGAGCCCAATaGAAGCAATATCTACTCCAT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRGRGAQ*KQYLLH
Trigger: ATGGAGTAGATATTGCTTCCATTGGGCTCCACGACC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACGGACTGTCCAGGAATaGGGAATTCCAAAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTRTVQE*GIPKSR
Trigger: TCTACTTTTTGGAATTCCTCATTCCTGGACAGTCCG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGAGGACTCACAAACGTaGAGATGTCATTCACTAGCT +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYEDSQT*RCHSLA
Trigger: AGCTAGTGAATGACATCTTCACGTTTGTGAGTCCTC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACATCTGAGTAGTTGTTaGAAGGGTCGAGATTCATCC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTHLSSC*KGRDSS
Trigger: GGATGAATCTCGACCCTTTCAACAACTACTCAGATG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCACACCAGAACAGTTTaGTCAAAACAAAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYHTRTV*SKQSGR
Trigger: CCTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCAGGCCTCCAGTACTTaGTGGTACCTCTTTTCATTA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYQASST*WYLFSL
Trigger: TAATGAAAAGAGGTACCAGCAAGTACTGGAGGCCTG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATTCCTGGACTGCGTCTaGAACGAAGACTCTTCTATT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRFLDCV*NEDSSI
Trigger: AATAGAAGAGTCTTCGTTCCAGACGCAGTCCAGGAA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACATTGTCTGCTGTATTaGATCAGCAAAACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTHCLLY*ISKTRS
Trigger: GCTCCTGGTTTTGCTGATCCAATACAGCAGACAATG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACGGAGGTTTTGTACTTaGTCTCTGAATGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTRRFCT*SLNEGS
Trigger: GGAACCTTCATTCAGAGACCAAGTACAAAACCTCCG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACTTTTACACCCAGCTTaGAGCACAGTTGGAAATAAC +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRLLHPA*STVGNN
Trigger: GTTATTTCCAACTGTGCTTCAAGCTGGGTGTAAAAG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCATAAACAGAAAATGTaGCCACAGATACCAGGACTG +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYHKQKM*PQIPGL
Trigger: CAGTCCTGGTATCTGTGGTCACATTTTCTGTTTATG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATGGCTTTGTCAAAATTaGAGTCATGTCGAATGGCAG +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTWLCQN*SHVEWQ
Trigger: CTGCCATTCGACATGACTGCAATTTTGACAAAGCCA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAAGGATCTCTTGGTCCTaGATTTATACACGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRRISWS*IYTRGE
Trigger: TTCTCCACGTGTATAAATCCAGGACCAAGAGATCCT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATGTTCTCTCTTCTCATaGTTATGGAGGCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRCSLFS*LWRLHL
Trigger: AAGATGCAGCCTCCATAACCATGAGAAGAGAGAACA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGAAAAGACACATTTCTaGTTGGTGTCAATCCTCACC +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYEKTHF*LVSILT
Trigger: GGTGAGGATTGACACCAACCAGAAATGTGTCTTTTC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAGATGCATGTTACATTaGAACAGTGGATGGACATGT +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYRCMLH*NSGWTC
Trigger: ACATGTCCATCCACTGTTTCAATGTAACATGCATCT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR TCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCTTGTGCAAGATATTTaGTGCATGGACGAAACCAAA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYLVQDI*CMDETK
Trigger: TTTGGTTTCGTCCATGCATCAAATATCTTGCACAAG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRSEIGK*HRVSRE
Trigger: TTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp TTTCAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGATGTGCGTTTCAAACTTaGTCACTAATGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQTCSLMSWFSSLHQLPRCAFQT*SLMSWF
Trigger: AAACCAAGACATTAGTGAGCAAGTTTGAAACGCACA...TCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGGCACTCCAGAAATGTaGTATGAACACAAATATACC +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYGTPEM*YEHKYT
Trigger: GGTATATTTGTGTTCATAGCACATTTCTGGAGTGCC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATTCAGGAATGAAGCTATaGATGATGGATTATTTGATG +
Preference number: 4 (lower is better)
Translates to: QTCSLMSWFSSLHQLPRHSGMKL*MMDYLM
Trigger: CATCAAATAATCCATCATCCATAGCTTCATTCCTGA...ATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACCCTCAGAAAACTGCATaGCTTTGTCAAAATTGCAGT +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYPQKTA*LCQNCS
Trigger: ACTGCAATTTTGACAAAGCCATGCAGTTTTCTGAGG...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACAAAGATATTTGATGCATaGACGAAACCAAAGGCACTC +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTKIFDA*TKPKAL
Trigger: GAGTGCCTTTGGTTTCGTCCATGCATCAAATATCTT...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATGTGCGTTTCAAACTTaGTCACTAATGTCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PTETTDKQRIQTLELSDTCAFQT*SLMSWF
Trigger: AAACCAAGACATTAGTGAGCAAGTTTGAAACGCACA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATCTGCTAGAATTTTGTaGTGTTCACATTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRSARIL*CSHSQC
Trigger: GCATTGAGAATGTGAACAGCACAAAATTCTAGCAGA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTCTGCTAGAATTTTGTaGTGTTCACATTCTCAATGC +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYSARIL*CSHSQC
Trigger: GCATTGAGAATGTGAACAGCACAAAATTCTAGCAGA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAAGGACTGGAGTTAACTaGAAGACGAATATTACTACA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRRTGVN*KTNITT
Trigger: TGTAGTAATATTCGTCTTCCAGTTAACTCCAGTCCT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR GCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAAAGTGGAAATGCAAATaGCCCAGAAACATGAAAATA +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRKWKCK*PRNMKI
Trigger: TATTTTCATGTTTCTGGGGCATTTGCATTTCCACTT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATCAGGAATGAAGCTATaGATGATGGATTATTTGATG +
Preference number: 4 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRSGMKL*MMDYLM
Trigger: CATCAAATAATCCATCATCCATAGCTTCATTCCTGA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CCA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTGCTCACTAATGTCTTaGTTTTCATCTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYCSLMS*FSSLHQ
Trigger: TTGATGAAGAGATGAAAACCAAGACATTAGTGAGCA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACCCAGCTCCAGGCGAATaGCAAGCCACCTGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYPAPGE*QATCWR
Trigger: CCTCCAACAGGTGGCTTGCAATTCGCCTGGAGCTGG...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 90 bp CCAAATGTGTTCCCCTCTCAGCCTCGCATGCCTGCTCCTTCTGACTaGAACACACTTCCCTCTGACTGTCCCTCAGAGGGCCTGATCTCA +
Preference number: 5 (lower is better)
Translates to: PNVFPSQPRMPAPSD*NTLPSDCPSEGLIS
Trigger: TGAGATCAGGCCCTCTGAGGGACAGTCAGAGGGAAGTGTGTTCCAGTCAGAAGGAGCAGGCATGCGAGGCTGAGAGGGGAACACATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS CCA 90 bp CTGTCCACTTCCTTGAGCCCATCTCACCCCATGCGCACCCTGTCCTaGATCTTCTTGCCATTCCCTGAGCAAGCCAAATGTGTTCCCCTC +
Preference number: 5 (lower is better)
Translates to: LSTSLSPSHPMRTLS*IFLPFPEQAKCVPL
Trigger: GAGGGGAACACATTTGGCTTGCTCAGGGAATGGCAAGAAGATCCAGGACAGGGTGCGCATGGGGTGAGATGGGCTCAAGGAAGTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAATTCAGGACAGTGGTaGTCCCTGGGAGGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYNSGQW*SLGGVG
Trigger: ACCCACCCCTCCCAGGGACAACCACTGTCCTGAATT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS CCA 90 bp AAGGAGGATTTCCCAGAGCCGACAGGGCCTATCACAGCCACAAGTTaGCCTGCCATAATGTCCAGGTTCACATCTCGGACTGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: KEDFPEPTGPITATS*PAIMSRFTSRTVAS
Trigger: GGAAGCCACAGTCCGAGATGTGAACCTGGACATTATGGCAGGCCAACTTGTGGCTGTGATAGGCCCTGTCGGCTCTGGGAAATCCTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTCCACACCAGAACAGTTaGCTCAAAACAAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRPHQNS*LKTKWQ
Trigger: CTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTGG...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS TCA 90 bp GTGCTGATTATCCCCAGGAAGCATGTAATCCAGCTGCGCAAGGACTaGGGCAGGGTGTCATCCACTGTGGAAATATCGCCGGCAAACCTG +
Preference number: 5 (lower is better)
Translates to: VLIIPRKHVIQLRKD*GRVSSTVEISPANL
Trigger: CAGGTTTGCCGGCGATATTTCCACAGTGGATGACACCCTGCCTCAGTCCTTGCGCAGCTGGATTACATGCTTCCTGGGGATAATCAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: DKGILALTLILVQARQPGSRDCG*SRVFCE
Trigger: CTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCT...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CTTCTCCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATTGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAG +
Preference number: 5 (lower is better)
Translates to: LLLPSLECPPGFLQLSLHCLGRG*DWYIEQ
Trigger: CTGTTCGATATACCAATCCAAGCCTCTACCTAGGCA...ATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: PAVSGVPAWLSAALSSCAKGILA*TLILVQ
Trigger: TTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTT...CGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAAGGCCAGCAGGTTCTaGAGCTCTTTCTTCCGGAGG +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDKASRF*SSFFRR
Trigger: CCTCCGGAAGAAAGAGCTCAAGAACCTGCTGGCCTT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAACTGGATCTTGCCTTaGCTGGGCCAATCTGGCGGA +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDNWILP*LGQSGG
Trigger: TCCGCCAGATTGGCCCAGCAAAGGCAAGATCCAGTT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTCCAGGACCAGGATCTaGGATTTCCGAAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSRTRI*DFRSRA
Trigger: GGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGGA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAGTTTTCCCCTCAGGTaGCCACCAGCCTCTGTCACT +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSFPLR*PPASVT
Trigger: AGTGACAGAGGCTGGTGGCAACCTGAGGGGAAAACT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS TCA 90 bp GATGGTGATGTGCCCGTGGACATTTTCCATTTCTCCCAGCATGGCTaGTATCAAGGAGGATTTCCCAGAGCCGACAGGGCCTATCACAGC +
Preference number: 5 (lower is better)
Translates to: DGDVPVDIFHFSQHG*YQGGFPRADRAYHS
Trigger: GCTGTGATAGGCCCTGTCGGCTCTGGGAAATCCTCCTTGATATCAGCCATGCTGGGAGAAATGGAAAATGTCCACGGGCACATCACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 90 bp CAGAAATCGCTGCTGGTGCTCAAAGGCACGGATAACTGGCAAACCTaGTACGGTCTCGCTGAAGTGAGAGTAGATTGGGGACCTGGTGAC +
Preference number: 5 (lower is better)
Translates to: QKSLLVLKGTDNWQT*YGLAEVRVDWGPGD
Trigger: GTCACCAGGTCCCCAATCTACTCTCACTTCAGCGAGACCGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GGCATCTCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGTGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAG +
Preference number: 5 (lower is better)
Translates to: GISLGASLMPSRNKAAPVCLGRG*DWYIEQ
Trigger: CTGTTCGATATACCAATCCAAGCCTCTACCTAGGCA...CACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGAGATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACACCAAGAGTCGAGTCTaGCCTTTCAACAGGCCATTG +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYTKSRV*PFNRPL
Trigger: CAATGGCCTGTTGAAAGGCAAGACTCGACTCTTGGT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 90 bp TCACTTCGTGGGATAACCCAAGTTGCAGGCTGGCCACAAAAGACTTaGGGTGAGCCAGCTCCAAGGCCTTCCAAATCTCCTCATCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLRGITQVAGWPQKT*GEPAPRPSKSPHLS
Trigger: ACTCAGATGAGGAGATTTGGAAGGCCTTGGAGCTGGCTCACCTCAAGTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCCACGAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS CCA 90 bp GGATCAGCAAAACCAGGAGCCATGTGCCTAGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGACTGTGGCTTGTCCAGAGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GSAKPGAMCLGRGLD*YIEQQGLWLVQSLL
Trigger: CAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTCGATATACCAATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTTTGCTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS CCA 90 bp CACTTGGTAGTTGTTAAACTGGATCTTGCCTTTGCTGGGCCAATCTaGCGGAGGCCTCTTATCAGTCACCCAGGGTGCCTCATTTTCCAC +
Preference number: 5 (lower is better)
Translates to: HLVVVKLDLAFAGPI*RRPLISHPGCLIFH
Trigger: GTGGAAAATGAGGCACCCTGGGTGACTGATAAGAGGCCTCCGCCAGATTGGCCCAGCAAAGGCAAGATCCAGTTTAACAACTACCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS-3UTR CAA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSSRDCG*SRVFCE
Trigger: CTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCT...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLSRDCG*SRVFCE
Trigger: CTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCT...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAG +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYCLGRG*DWYIEQ
Trigger: CTGTTCGATATACCAATCCAAGCCTCTACCTAGGCA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATGTGCGTATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPSLECPPGFLQLSLHVRMCVSN*LTNVLV
Trigger: AACCAAGACATTAGTGAGCAAGTTTGAAACGCACAT...ACGCACATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACCAGGACAAGGGCATCTaGGCTTTGACTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYQDKGI*ALTLIL
Trigger: AAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTG...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACAGCATGTGCATGAAGTaGGTCACATCCATGAGCTTC +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSMCMK*VTSMSF
Trigger: GAAGCTCATGGATGTGACCAACTTCATGCACATGCT...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTATCACAGCCACAAGTaGGCCTGCCATAATGTCCAG +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDYHSHK*ACHNVQ
Trigger: CTGGACATTATGGCAGGCCAACTTGTGGCTGTGATA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTCTAGGACCATTACCTaGTCACTGTCCATGATGGTG +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSRTIT*SLSMMV
Trigger: CACCATCATGGACAGTGACAAGGTAATGGTCCTAGA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CAA 90 bp ATGGTCTGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCCACACCAGAACAGTTaGCTCAAAACAAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: MVCTTLFWACGASVRPRHPHQNS*LKTKWQ
Trigger: CTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTGG...ATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACAGACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATCCATTGTCTGCTGTATaGGATCAGCAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDPLSAV*DQQNQE
Trigger: CTCCTGGTTTTGCTGATCCAATACAGCAGACAATGG...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTTCTCCTGCCGTCTCTGGAGTGCCCGCCTGGCTTTCTGCAGCTCTCTCTTCATATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LLLPSLECPPGFLQLSLHMCVSN*LTNVLV
Trigger: AACCAAGACATTAGTGAGCAAGTTTGAAACGCACAT...ATGAAGAGAGAGCTGCAGAAAGCCAGGCGGGCACTCCAGAGACGGCAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTGCTCCCAGGACAAGGGCATCTaGGCTTTGACTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: LECQRTLVAFQNDACSCSQDKGI*ALTLIL
Trigger: AAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTG...GGAGCAAGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTCAATCCTCACCTCATaGTGTTTCAGAAATCGCTGC +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSILTS*CFRNRC
Trigger: GCAGCGATTTCTGAAACACAATGAGGTGAGGATTGA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp TCAGGGCTGCCGCACTCTATAATCTTCCCGTTGTCTAGGACCATTACCTTGTCAGTGGGCGAACTCGTTTaGGATGGTCGTCTGAATGAG +
Preference number: 5 (lower is better)
Translates to: SGLPHSIIFPLSRTITLSVGELV*DGRLNE
Trigger: CTCATTCAGACGACCATCCAAAACGAGTTCGCCCAC...TGACAAGGTAATGGTCCTAGACAACGGGAAGATTATAGAGTGCGGCAGCCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS TCA 90 bp AGACTTGAGGTGAGCCAGCTCCAAGGCCTTCCAAATCTCCTCATCTaGGTAGTTGTTGAAAGGGTCGAGATTCATCCTCAGGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: RLEVSQLQGLPNLLI*VVVERVEIHPQASR
Trigger: TCTGGAAGCCTGAGGATGAATCTCGACCCTTTCAACAACTACTCAGATGAGGAGATTTGGAAGGCCTTGGAGCTGGCTCACCTCAAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS GCA 90 bp TTGGTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTGCTGGTaGTCAAAGGCACGGATAACTGGCAAACCTGATACGGTCTCGCTG +
Preference number: 5 (lower is better)
Translates to: LVSILTSLCFRNRCW*SKARITGKPDTVSL
Trigger: CAGCGAGACCGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 90 bp TCCCAGAGCTCCGTAGACTCCAACTCTCATGTCCCTCTGAGATGCTaGATAGTCGGTGCTATTGAAGATTTTAGAGTCACTGGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SQSSVDSNSHVPLRC*IVGAIEDFRVTGPS
Trigger: GCTTGGACCAGTGACTCTAAAATCTTCAATAGCACCGACTATCCAGCATCTCAGAGGGACATGAGAGTTGGAGTCTACGGAGCTCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 90 bp TGGTTGGTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTGCTaGTGCTCAAAGGCACGGATAACTGGCAAACCTGATACGGTCTCG +
Preference number: 5 (lower is better)
Translates to: WLVSILTSLCFRNRC*CSKARITGKPDTVS
Trigger: CGAGACCGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACACCAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp TTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: LFWACGASVRPRHLKVIFSRDCG*SRVFCE
Trigger: CTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCT...GAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TCCTTGGGGGCCTCCTTGATGCCCTCAAGAAATAAAGCAGCCCCTGTGGCATCTAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: SLGASLMPSRNKAAPVASKGILA*TLILVQ
Trigger: TTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTT...AGATGCCACAGGGGCTGCTTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACTCGAAAACAATCCTATaGCTTGTAGGTACTCCAGGT +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYSKTIL*LVGTPG
Trigger: ACCTGGAGTACCTACAAGCAATAGGATTGTTTTCGA...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGTGAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGTGATATTGAGTGCATaGGACAGAACAAAGCCAACA +
Preference number: 5 (lower is better)
Translates to: REIQDSGCPWEGWVARKYVILSA*DRTKPT
Trigger: TGTTGGCTTTGTTCTGTCCAATGCACTCAATATCAC...GTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCGCCCCTGTGGCATCTTaGTTTTTGGTGTGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSAPVAS*FLVCVV
Trigger: AACCACACACACCAAAAACAAAGATGCCACAGGGGC...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp CTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCCCTGTGGCATCTTaGTTTTTGGTGTGTGTGGTT +
Preference number: 5 (lower is better)
Translates to: LPGQGHLGFDSDSCSSQAAPVAS*FLVCVV
Trigger: AACCACACACACCAAAAACAAAGATGCCACAGGGGC...TGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649493.1
CDS-3UTR CAA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCCTTGGGGGCCTCCTaGATGCCCTCAAGAAATAAA +
Preference number: 5 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLSLGAS*MPSRNK
Trigger: TTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS GCA 90 bp TGTCACCCTGTAAGAGTGTCCGGATCAGAGTCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAATCCAGAATAGGGACAGGAACCAGG +
Preference number: 5 (lower is better)
Translates to: CHPVRVSGSESEIGK*HRVSRESRIGTGTR
Trigger: CCTGGTTCCTGTCCCTATTCTGGATTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGACTCTGATCCGGACACTCTTACAGGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS GCA 90 bp TTCTGGTTGGTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTaGTGGTGCTCAAAGGCACGGATAACTGGCAAACCTGATACGGTC +
Preference number: 5 (lower is better)
Translates to: FWLVSILTSLCFRNR*WCSKARITGKPDTV
Trigger: GACCGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACACCAACCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCTTCCAAAAAGTAGAGTaGCAGAACTTCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DKGILALTLILVQARQPGFQKVE*QNFSSM
Trigger: CATGCTGGAGAAGTTCTGCAACTCTACTTTTTGGAA...GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTGTGGTAGAGGATCTCTaGGTCCTGGATTTATACACG +
Preference number: 5 (lower is better)
Translates to: TTLFWACGASVRPRHLKVVVEDL*VLDLYT
Trigger: CGTGTATAAATCCAGGACCAAGAGATCCTCTACCAC...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CAA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCGTGGTAGAGGATCTCTaGGTCCTGGATTTATACACG +
Preference number: 5 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSVVEDL*VLDLYT
Trigger: CGTGTATAAATCCAGGACCAAGAGATCCTCTACCAC...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCATGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAG +
Preference number: 5 (lower is better)
Translates to: LHQLPRHPRVSEDACSLSCLGRG*DWYIEQ
Trigger: CTGTTCGATATACCAATCCAAGCCTCTACCTAGGCA...TGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTCCATTGTCTGCTGTATaGGATCAGCAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: TTLFWACGASVRPRHLKVPLSAV*DQQNQE
Trigger: CTCCTGGTTTTGCTGATCCAATACAGCAGACAATGG...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CAA 90 bp CAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGCTCGATCAGAGTCTGAAATaGGAAAGTGCCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: QGHLGFDSDSCSSQAAWLDQSLK*ESATEY
Trigger: ATACTCTGTGGCACTTTCCAATTTCAGACTCTGATC...GAGCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDKGILA*TLILVQ
Trigger: TTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGTTCCAAAAAGGATGTaGTCCTTTATGGTGCCATTC +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDVPKRM*SFMVPF
Trigger: GAATGGCACCATAAAGGACAACATCCTTTTTGGAAC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATGCTTGTGCAAGATATTaGATGCATGGACGAAACCAA +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDACARY*MHGRNQ
Trigger: TTGGTTTCGTCCATGCATCAAATATCTTGCACAAGC...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTCTATAATCTTCCCGTaGTCTAGGACCATTACCTTG +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDSIIFP*SRTITL
Trigger: CAAGGTAATGGTCCTAGACAACGGGAAGATTATAGA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CAA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATATACCTTATTCTGGGCTaGTGGCGCCTCCGTGAGACC +
Preference number: 5 (lower is better)
Translates to: ACGASVRPRHLKVIFIKIYLILG*WRLRET
Trigger: GGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTA...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS TCA 90 bp TCGTGGAGCCCAATGGAAGCAATATCTACTCCATCAATGATAATCTaGCCACCGGCAGCCTCTAAGATTCTGAAGAGGCAGTTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SWSPMEAISTPSMII*PPAASKILKRQFVR
Trigger: CCTCACAAACTGCCTCTTCAGAATCTTAGAGGCTGCCGGTGGTCAGATTATCATTGATGGAGTAGATATTGCTTCCATTGGGCTCCACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS-3UTR CAA 90 bp GACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTTCCAAAAAGTAGAGTaGCAGAACTTCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DILECQRTLVAFQNDACSFQKVE*QNFSSM
Trigger: CATGCTGGAGAAGTTCTGCAACTCTACTTTTTGGAA...AGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp AATCTTGGCTCACCGCAACCTCCATCTCCCGGCTTCAAAGTGATTCTCCTGCTTGATCAGAGTCTGAAATaGGAAAGTGCCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: NLGSPQPPSPGFKVILLLDQSLK*ESATEY
Trigger: ATACTCTGTGGCACTTTCCAATTTCAGACTCTGATC...AAGCAGGAGAATCACTTTGAAGCCGGGAGATGGAGGTTGCGGTGAGCCAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDMCVSN*LTNVLV
Trigger: AACCAAGACATTAGTGAGCAAGTTTGAAACGCACAT...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTCCTTCCTGGCCAAGTaGGATAGGGTCAATGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRSFLAK*DRVNAF
Trigger: GAAGGCATTGACCCTATCCAACTTGGCCAGGAAGGA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTTCAGATGCCTGCCATaGGACCTAGAACTGCGGCTA +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRFRCLP*DLELRL
Trigger: TAGCCGCAGTTCTAGGTCCAATGGCAGGCATCTGAA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAAATTCAGGACAGTGGTTGTCCCTGGGAGGGGTGGGTAGCAAGGAAGTACGATTTGTTCAGCAGTTGCTaGTGCAAGATATTTGATGCA +
Preference number: 5 (lower is better)
Translates to: EIQDSGCPWEGWVARKYDLFSSC*CKIFDA
Trigger: TGCATCAAATATCTTGCACAAGCAACTGCTGAACAA...ATCGTACTTCCTTGCTACCCACCCCTCCCAGGGACAACCACTGTCCTGAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAATTCTTATTCTGGGCTaGTGGCGCCTCCGTGAGACC +
Preference number: 5 (lower is better)
Translates to: LMSWFSSLHQLPRHPRVSILILG*WRLRET
Trigger: GGTCTCACGGAGGCGCCACAAGCCCAGAATAAGAAT...TGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649932.1
CDS-3UTR CAA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGATCCTTGGGGGCCTCCTaGATGCCCTCAAGAAATAAA +
Preference number: 5 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGSLGAS*MPSRNK
Trigger: TTTATTTCTTGAGGGCATCAAGGAGGCCCCCAAGGA...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS GCA 90 bp AGAATAGGGACAGGAACCAGGAGTTTTTCTGTACACACCATTGTCTaGTGTATTGGATCAGCAAAACCAGGAGCCATGTGCCTAGGTAGA +
Preference number: 5 (lower is better)
Translates to: RIGTGTRSFSVHTIV*CIGSAKPGAMCLGR
Trigger: TCTACCTAGGCACATGGCTCCTGGTTTTGCTGATCCAATACAGCAGACAATGGTGTGTACAGAAAAACTCCTGGTTCCTGTCCCTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS CCA 90 bp ATTGCAAGCCACCTGTTGGAGGTGATCCAGGAAAAGACACATTTCTaGTTGGTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTGC +
Preference number: 5 (lower is better)
Translates to: IASHLLEVIQEKTHF*LVSILTSLCFRNRC
Trigger: GCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACACCAACCAGAAATGTGTCTTTTCCTGGATCACCTCCAACAGGTGGCTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp TGTACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAATTCCAAAAAGTAGAGTaGCAGAACTTCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: CTTLFWACGASVRPRHLKFQKVE*QNFSSM
Trigger: CATGCTGGAGAAGTTCTGCAACTCTACTTTTTGGAA...TTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS-3UTR CAA 90 bp AACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCCCATTGTCTGCTGTATaGGATCAGCAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: NIFQDKGILALTLILVQAPLSAV*DQQNQE
Trigger: CTCCTGGTTTTGCTGATCCAATACAGCAGACAATGG...GGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACCATTGTCTGCTGTATaGGATCAGCAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGPLSAV*DQQNQE
Trigger: CTCCTGGTTTTGCTGATCCAATACAGCAGACAATGG...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATTTCTGTACACACCATaGTCTGCTGTATTGGATCAG +
Preference number: 5 (lower is better)
Translates to: HQLPRHPRVSEDACSLSEFLYTP*SAVLDQ
Trigger: CTGATCCAATACAGCAGACAATGGTGTGTACAGAAA...TTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTTTCTGTACACACCATaGTCTGCTGTATTGGATCAG +
Preference number: 5 (lower is better)
Translates to: SLHQLPRHPRVSEDACSLFLYTP*SAVLDQ
Trigger: CTGATCCAATACAGCAGACAATGGTGTGTACAGAAA...AAGGCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACGCTTGTAGCTTTCTGTACACACCATaGTCTGCTGTATTGGATCAG +
Preference number: 5 (lower is better)
Translates to: SSLHQLPRHPRVSEDACSFLYTP*SAVLDQ
Trigger: CTGATCCAATACAGCAGACAATGGTGTGTACAGAAA...GCTACAAGCGTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACAGGACAAGGGCATCTaGGCTTTGACTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGQDKGI*ALTLIL
Trigger: AAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTG...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS CCA 90 bp AAGGCCAGCAGGTTCTTGAGCTCTTTCTTCCGGAGGTTTTGTACTTaGTCTCTGAATGAAGGTTCCCAGGCAAAATATTTCAGGATCTTG +
Preference number: 5 (lower is better)
Translates to: KASRFLSSFFRRFCT*SLNEGSQAKYFRIL
Trigger: CAAGATCCTGAAATATTTTGCCTGGGAACCTTCATTCAGAGACCAAGTACAAAACCTCCGGAAGAAAGAGCTCAAGAACCTGCTGGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GACATCCTCGAGTGTCAGAGGACGCTTGTAGCCTTTCAGAATGATGCCTGCTCTTTGCTCACTAATGTCTaGGTTTTCATCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: DILECQRTLVAFQNDACSLLTNV*VFISSS
Trigger: TGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA...AGAGCAGGCATCATTCTGAAAGGCTACAAGCGTCCTCTGACACTCGAGGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000648324.1
ENST00000649493.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGACAGGCCTCCAGTACTaGCTGGTACCTCTTTTCATT +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRTGLQY*LVPLFI
Trigger: AATGAAAAGAGGTACCAGCAAGTACTGGAGGCCTGT...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTGCTGTGGCCATTAGGGAACATATTAAACAGGGGGTGGCCAAAGTGCTGTAATTCTATAATCTTCCCGTaGTCTAGGACCATTACCTTG +
Preference number: 5 (lower is better)
Translates to: LLWPLGNILNRGWPKCCNSIIFP*SRTITL
Trigger: CAAGGTAATGGTCCTAGACAACGGGAAGATTATAGA...ATTACAGCACTTTGGCCACCCCCTGTTTAATATGTTCCCTAATGGCCACAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS-3UTR CAA 90 bp ACTACCTTATTCTGGGCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTTCAACATGTGTTTATTaGGAGACCCTAAAGCCACTA +
Preference number: 5 (lower is better)
Translates to: TTLFWACGASVRPRHLKVSTCVY*ETLKPL
Trigger: TAGTGGCTTTAGGGTCTCCAAATAAACACATGTTGA...AACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGCCCAGAATAAGGTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648689.1
CDS TCA 90 bp GCTAGATTAGAATTGTCACCCTGTAAGAGTGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAGAGTATCGAGAGAATCCAGAATAGG +
Preference number: 5 (lower is better)
Translates to: ARLELSPCKSVRIRV*NWKVPQSIERIQNR
Trigger: CCTATTCTGGATTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGACTCTGATCCGGACACTCTTACAGGGTGACAATTCTAATCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS TCA 90 bp AGGACTGGAGTTAACTGGAAGACGAATATTACTACACACTGTAGTTaGCTAAAGGCCAGCAGGTTCTTGAGCTCTTTCTTCCGGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RTGVNWKTNITTHCS*LKASRFLSSFFRRF
Trigger: AAACCTCCGGAAGAAAGAGCTCAAGAACCTGCTGGCCTTTAGTCAACTACAGTGTGTAGTAATATTCGTCTTCCAGTTAACTCCAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 90 bp AAGAAGATAGATAAGACAATCTGTAGAACACTTGACCACAGCATGTaGATGAAGTTGGTCACATCCATGAGCTTCTGGGCATCCACAGAC +
Preference number: 5 (lower is better)
Translates to: KKIDKTICRTLDHSM*MKLVTSMSFWASTD
Trigger: GTCTGTGGATGCCCAGAAGCTCATGGATGTGACCAACTTCATGCACATGCTGTGGTCAAGTGTTCTACAGATTGTCTTATCTATCTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTCCACACCAGAACAGTTaGCTCAAAACAAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LTNVLVFISSSTSQTSSSPHQNS*LKTKWQ
Trigger: CTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTGG...ACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGTGGTAGAGGATCTCTaGGTCCTGGATTTATACACG +
Preference number: 5 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRVVEDL*VLDLYT
Trigger: CGTGTATAAATCCAGGACCAAGAGATCCTCTACCAC...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGGTGGTAGAGGATCTCTaGGTCCTGGATTTATACACG +
Preference number: 5 (lower is better)
Translates to: LLTNVLVFISSSTSQTSSVVEDL*VLDLYT
Trigger: CGTGTATAAATCCAGGACCAAGAGATCCTCTACCAC...CGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATATGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAG +
Preference number: 5 (lower is better)
Translates to: ACGASVRPRHLKVIFIKICLGRG*DWYIEQ
Trigger: CTGTTCGATATACCAATCCAAGCCTCTACCTAGGCA...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CAA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGACCATTGTCTGCTGTATaGGATCAGCAAAACCAGGAG +
Preference number: 5 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRPLSAV*DQQNQE
Trigger: CTCCTGGTTTTGCTGATCCAATACAGCAGACAATGG...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGAGATCAGAGTCTGAAATaGGAAAGTGCCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGDQSLK*ESATEY
Trigger: ATACTCTGTGGCACTTTCCAATTTCAGACTCTGATC...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp AATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGACAGGACAAGGGCATCTaGGCTTTGACTCTGATTCTT +
Preference number: 5 (lower is better)
Translates to: NVLVFISSSTSQTSSSVRQDKGI*ALTLIL
Trigger: AAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTG...TCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGCAGCCAGTTCAGGGTTaGTGTGATATTGAGTGCATT +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRQPVQG*CDIECI
Trigger: AATGCACTCAATATCACACAAACCCTGAACTGGCTG...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTGGCCTATGCTCAGGTaGCCACCAGCCTCTGTCACT +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYWPMLR*PPASVT
Trigger: AGTGACAGAGGCTGGTGGCAACCTGAGCATAGGCCA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 90 bp TTGCAAAGGAGATCAGCAATTTCAGCAGCTGAGGACTCACAAACGTaGAGATGTCATTCACTAGCTTCAGTAGGAATGATTTCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: LQRRSAISAAEDSQT*RCHSLASVGMISGA
Trigger: TGCTCCTGAAATCATTCCTACTGAAGCTAGTGAATGACATCTTCACGTTTGTGAGTCCTCAGCTGCTGAAATTGCTGATCTCCTTTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 90 bp AGGTGCTCGAAGGATATTGTTCAGCAGTTGCTTGTGCAAGATATTTaGTGCATGGACGAAACCAAAGGCACTCCAGAAATGTGCTATGAA +
Preference number: 5 (lower is better)
Translates to: RCSKDIVQQLLVQDI*CMDETKGTPEMCYE
Trigger: TTCATAGCACATTTCTGGAGTGCCTTTGGTTTCGTCCATGCATCAAATATCTTGCACAAGCAACTGCTGAACAATATCCTTCGAGCACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTTCCAAAAAGTAGAGTaGCAGAACTTCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRFQKVE*QNFSSM
Trigger: CATGCTGGAGAAGTTCTGCAACTCTACTTTTTGGAA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACAAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PTETTDKQRIQTLELSDTSRDCG*SRVFCE
Trigger: CTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCT...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp TCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGACATGTGCGTTTCAAACTaGCTCACTAATGTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: SWFSSLHQLPRHPRVSEDMCVSN*LTNVLV
Trigger: AACCAAGACATTAGTGAGCAAGTTTGAAACGCACAT...GTCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATCCAGGACCAGGATCTaGGATTTCCGAAGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: PTETTDKQRIQTLELSDTSRTRI*DFRSRA
Trigger: GGCTCTGCTTCGGAAATCCAAGATCCTGGTCCTGGA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATATTTCTGTACACACCATaGTCTGCTGTATTGGATCAG +
Preference number: 5 (lower is better)
Translates to: ACGASVRPRHLKVIFIKIFLYTP*SAVLDQ
Trigger: CTGATCCAATACAGCAGACAATGGTGTGTACAGAAA...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GCTTGTGGCGCCTCCGTGAGACCCAGACATCTTAAAGTTATATTCATTAAGATAGATCAGAGTCTGAAATaGGAAAGTGCCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: ACGASVRPRHLKVIFIKIDQSLK*ESATEY
Trigger: ATACTCTGTGGCACTTTCCAATTTCAGACTCTGATC...TATCTTAATGAATATAACTTTAAGATGTCTGGGTCTCACGGAGGCGCCACAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648689.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAGAGGATTGCTCACTAATGTCTaGGTTTTCATCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: VLVFISSSTSQTSSSVRGLLTNV*VFISSS
Trigger: TGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA...TCCTCTGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp AACATCTTCCAGGACAAGGGCATCTTGGCTTTGACTCTGATTCTTGTTCAAGCCTTGCTCACTAATGTCTaGGTTTTCATCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: NIFQDKGILALTLILVQALLTNV*VFISSS
Trigger: TGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA...GGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTCGAGTGTCAAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAA +
Preference number: 5 (lower is better)
Translates to: LMSWFSSLHQLPRHPRVSKGILA*TLILVQ
Trigger: TTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTT...TGACACTCGAGGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGTGGGCGAACTCGTTTaGGATGGTCGTCTGAATGAG +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYVGELV*DGRLNE
Trigger: CTCATTCAGACGACCATCCAAAACGAGTTCGCCCAC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000648523.1
CDS-3UTR CAA 90 bp AACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACATCCTTCCAAAAAGTAGAGTaGCAGAACTTCTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: NLLTNVLVFISSSTSQTSFQKVE*QNFSSM
Trigger: CATGCTGGAGAAGTTCTGCAACTCTACTTTTTGGAA...GGATGTCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp TTTCAAACTTGCTCACTAATGTCTTGGTTTTCATCTCTTCATCAACTTCCCAGACCACACCAGAACAGTTaGCTCAAAACAAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FQTCSLMSWFSSLHQLPRPHQNS*LKTKWQ
Trigger: CTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTGG...TCTGGGAAGTTGATGAAGAGATGAAAACCAAGACATTAGTGAGCAAGTTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000648324.1
ENST00000649493.1
ENST00000649932.1
CDS-3UTR CAA 90 bp CGAGGGGTTTCTCAAGTACCTGGTGACATTTATTTTCTTAACCTGGGTAGTAGGTTGCTCACTAATGTCTaGGTTTTCATCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: RGVSQVPGDIYFLNLGSRLLTNV*VFISSS
Trigger: TGATGAAGAGATGAAAACCAAGACATTAGTGAGCAA...CCTACTACCCAGGTTAAGAAAATAAATGTCACCAGGTACTTGAGAAACCCCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAGGAAAGCGCAGGATATaGAAGAGGGTAATGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRGKRRI*KRVMEV
Trigger: CACCTCCATTACCCTCTTCAATATCCTGCGCTTTCC...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGCACTGAGCCAGAGGTaGGATCCAATAAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYALSQR*DPIKAT
Trigger: TGTGGCTTTTATTGGATCCAACCTCTGGCTCAGTGC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGGTGCTCGAAGGATATaGTTCAGCAGTTGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYGARRI*FSSCLC
Trigger: GCACAAGCAACTGCTGAACAATATCCTTCGAGCACC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGACCACACCAGAACAGTTaGCTCAAAACAAAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRPHQNS*LKTKWQ
Trigger: CTGCCACTTTGTTTTGAGCAAACTGTTCTGGTGTGG...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGTGGTAGAGGATCTCTaGGTCCTGGATTTATACACG +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYVVEDL*VLDLYT
Trigger: CGTGTATAAATCCAGGACCAAGAGATCCTCTACCAC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACAAGGTCGGTACCGCACTaGGTAGTTGTTAAACTGGAT +
Preference number: 5 (lower is better)
Translates to: PTETTDKQRIQTLELSDTRSVPH*VVVKLD
Trigger: ATCCAGTTTAACAACTACCAAGTGCGGTACCGACCT...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGAATGTGTCACGGTCACTaGCAAAGGAGATCAGCAATT +
Preference number: 5 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRMCHGH*QRRSAI
Trigger: AATTGCTGATCTCCTTTGCAAGTGACCGTGACACAT...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAAGACACATTTCTGGTaGGTGTCAATCCTCACCTCA +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYKTHFW*VSILTS
Trigger: TGAGGTGAGGATTGACACCAACCAGAAATGTGTCTT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCCAATATTAAAACTGATACATTGTGCTGTATTCATACAATGCCAGACTACAGATTGTTAAACTGGATCTaGCCTTTGCTGGGCCAATCT +
Preference number: 5 (lower is better)
Translates to: PNIKTDTLCCIHTMPDYRLLNWI*PLLGQS
Trigger: AGATTGGCCCAGCAAAGGCAAGATCCAGTTTAACAA...TCTGTAGTCTGGCATTGTATGAATACAGCACAATGTATCAGTTTTAATATTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACTTTCTGTACACACCATaGTCTGCTGTATTGGATCAG +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYFLYTP*SAVLDQ
Trigger: CTGATCCAATACAGCAGACAATGGTGTGTACAGAAA...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACGATCAGAGTCTGAAATaGGAAAGTGCCACAGAGTAT +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYDQSLK*ESATEY
Trigger: ATACTCTGTGGCACTTTCCAATTTCAGACTCTGATC...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACATACAATCTCATCCACTaGAGGAAGAAAGTGCATGCT +
Preference number: 5 (lower is better)
Translates to: PTETTDKQRIQTLELSDTYNLIH*RKKVHA
Trigger: AGCATGCACTTTCTTCCTCAAGTGGATGAGATTGTA...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp GAACAAAAGAATCAAGTCATAGAAGATGTATGCAGTATGAGTCAGTCCATTTACAGGGTTTGTGTGATATaGAGTGCATTGGACAGAACA +
Preference number: 5 (lower is better)
Translates to: EQKNQVIEDVCSMSQSIYRVCVI*SALDRT
Trigger: TGTTCTGTCCAATGCACTCAATATCACACAAACCCT...GTAAATGGACTGACTCATACTGCATACATCTTCTATGACTTGATTCTTTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS-3UTR CAA 90 bp CCAACAGAAACAACAGATAAACAAAGAATCCAGACATTGGAATTATCAGACACACCTCATTTTCCACTTTaGTGTACTCAGTTATTCGCT +
Preference number: 5 (lower is better)
Translates to: PTETTDKQRIQTLELSDTPHFPL*CTQLFA
Trigger: AGCGAATAACTGAGTACACAAAAGTGGAAAATGAGG...TGTGTCTGATAATTCCAATGTCTGGATTCTTTGTTTATCTGTTGTTTCTGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 72 bp AGAGCCGACAGGGCCTATCACAGCCACAAGTTGGCCTaGCATAATGTCCAGGTTCACATCTCGGACTGTGGC +
Preference number: 6 (lower is better)
Translates to: RADRAYHSHKLA*HNVQVHISDCG
Trigger: GCCACAGTCCGAGATGTGAACCTGGACATTATGGCAGGCCAACTTGTGGCTGTGATAGGCCCTGTCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp CCATCTCACCCCATGCGCACCCTGTCCTGGATCTTCTaGCCATTCCCTGAGCAAGCCAAATGTGTTCCCCTC +
Preference number: 6 (lower is better)
Translates to: PSHPMRTLSWIF*PFPEQAKCVPL
Trigger: GAGGGGAACACATTTGGCTTGCTCAGGGAATGGCAAGAAGATCCAGGACAGGGTGCGCATGGGGTGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS CAA 90 bp CAAGGAGGATTTCCCAGAGCCGACAGGGCCTATCACAGCCACAAGTaGGCCTGCCATAATGTCCAGGTTCACATCTCGGACTGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: QGGFPRADRAYHSHK*ACHNVQVHISDCGF
Trigger: GAAGCCACAGTCCGAGATGTGAACCTGGACATTATGGCAGGCCAACTTGTGGCTGTGATAGGCCCTGTCGGCTCTGGGAAATCCTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp GTGCCCGTGGACATTTTCCATTTCTCCCAGCATGGCTaGTATCAAGGAGGATTTCCCAGAGCCGACAGGGCC +
Preference number: 6 (lower is better)
Translates to: VPVDIFHFSQHG*YQGGFPRADRA
Trigger: GGCCCTGTCGGCTCTGGGAAATCCTCCTTGATATCAGCCATGCTGGGAGAAATGGAAAATGTCCACGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 72 bp CATCTCACCCCATGCGCACCCTGTCCTGGATCTTCTTaGCATTCCCTGAGCAAGCCAAATGTGTTCCCCTCT +
Preference number: 6 (lower is better)
Translates to: HLTPCAPCPGSS*HSLSKPNVFPS
Trigger: AGAGGGGAACACATTTGGCTTGCTCAGGGAATGGCAAGAAGATCCAGGACAGGGTGCGCATGGGGTGAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS CCA 72 bp TCCTTGAGCCCATCTCACCCCATGCGCACCCTGTCCTaGATCTTCTTGCCATTCCCTGAGCAAGCCAAATGT +
Preference number: 6 (lower is better)
Translates to: SLSPSHPMRTLS*IFLPFPEQAKC
Trigger: ACATTTGGCTTGCTCAGGGAATGGCAAGAAGATCCAGGACAGGGTGCGCATGGGGTGAGATGGGCTCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS CCA 72 bp GTTGTTAAACTGGATCTTGCCTTTGCTGGGCCAATCTaGCGGAGGCCTCTTATCAGTCACCCAGGGTGCCTC +
Preference number: 6 (lower is better)
Translates to: VVKLDLAFAGPI*RRPLISHPGCL
Trigger: GAGGCACCCTGGGTGACTGATAAGAGGCCTCCGCCAGATTGGCCCAGCAAAGGCAAGATCCAGTTTAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS CCA 72 bp CCTATGCTCAGGTTGCCACCAGCCTCTGTCACTTCGTaGGATAACCCAAGTTGCAGGCTGGCCACAAAAGAC +
Preference number: 6 (lower is better)
Translates to: PMLRLPPASVTS*DNPSCRLATKD
Trigger: GTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCCACGAAGTGACAGAGGCTGGTGGCAACCTGAGCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS CCA 72 bp TTTCCCCTCAGGTTGCCACCAGCCTCTGTCACTTCGTaGGATAACCCAAGTTGCAGGCTGGCCACAAAAGAC +
Preference number: 6 (lower is better)
Translates to: FPLRLPPASVTS*DNPSCRLATKD
Trigger: GTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCCACGAAGTGACAGAGGCTGGTGGCAACCTGAGGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648523.1
CDS CAA 72 bp TTTCCCAGAGCCGACAGGGCCTATCACAGCCACAAGTaGGCCTGCCATAATGTCCAGGTTCACATCTCGGAC +
Preference number: 6 (lower is better)
Translates to: FPRADRAYHSHK*ACHNVQVHISD
Trigger: GTCCGAGATGTGAACCTGGACATTATGGCAGGCCAACTTGTGGCTGTGATAGGCCCTGTCGGCTCTGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp GGGATAACCCAAGTTGCAGGCTGGCCACAAAAGACTTaGGGTGAGCCAGCTCCAAGGCCTTCCAAATCTCCT +
Preference number: 6 (lower is better)
Translates to: GITQVAGWPQKT*GEPAPRPSKSP
Trigger: AGGAGATTTGGAAGGCCTTGGAGCTGGCTCACCTCAAGTCTTTTGTGGCCAGCCTGCAACTTGGGTTATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS CAA 90 bp AGTGATCCCTCTGAGGACCAGATCCAGCTCAGGTCGGTACCGCACTaGGTAGTTGTTAAACTGGATCTTGCCTTTGCTGGGCCAATCTGG +
Preference number: 6 (lower is better)
Translates to: SDPSEDQIQLRSVPH*VVVKLDLAFAGPIW
Trigger: CCAGATTGGCCCAGCAAAGGCAAGATCCAGTTTAACAACTACCAAGTGCGGTACCGACCTGAGCTGGATCTGGTCCTCAGAGGGATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS TCA 72 bp CTGCTGGTGCTCAAAGGCACGGATAACTGGCAAACCTaGTACGGTCTCGCTGAAGTGAGAGTAGATTGGGGA +
Preference number: 6 (lower is better)
Translates to: LLVLKGTDNWQT*YGLAEVRVDWG
Trigger: TCCCCAATCTACTCTCACTTCAGCGAGACCGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp AACCCAAGTTGCAGGCTGGCCACAAAAGACTTGAGGTaGGCCAGCTCCAAGGCCTTCCAAATCTCCTCATCT +
Preference number: 6 (lower is better)
Translates to: NPSCRLATKDLR*ASSKAFQISSS
Trigger: AGATGAGGAGATTTGGAAGGCCTTGGAGCTGGCTCACCTCAAGTCTTTTGTGGCCAGCCTGCAACTTGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS CCA 72 bp AAACCAGGAGCCATGTGCCTAGGTAGAGGCTTGGATTaGTATATCGAACAGCAGGGACTGTGGCTTGTCCAG +
Preference number: 6 (lower is better)
Translates to: KPGAMCLGRGLD*YIEQQGLWLVQ
Trigger: CTGGACAAGCCACAGTCCCTGCTGTTCGATATACCAATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS CAA 72 bp GCTTGGATTGGTATATCGAACAGCAGGGACTGTGGCTaGTCCAGAGTCTTCTGTGAGTACAAGGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: AWIGISNSRDCG*SRVFCEYKGQL
Trigger: GAGCTGGCCCTTGTACTCACAGAAGACTCTGGACAAGCCACAGTCCCTGCTGTTCGATATACCAATCCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370434.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS CAA 72 bp TCTGAGGACCAGATCCAGCTCAGGTCGGTACCGCACTaGGTAGTTGTTAAACTGGATCTTGCCTTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SEDQIQLRSVPH*VVVKLDLAFAG
Trigger: CCCAGCAAAGGCAAGATCCAGTTTAACAACTACCAAGTGCGGTACCGACCTGAGCTGGATCTGGTCCTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS GCA 72 bp TGGATATCAGCCCATAGTCATCGTCTTCTTCTTCACTaGCATCATGGACTGTGGCTTCCTCTTCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: WISAHSHRLLLH*HHGLWLPLQGL
Trigger: CAGGCCCTGAAGAGGAAGCCACAGTCCATGATGGCAGTGAAGAAGAAGACGATGACTATGGGCTGATATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 72 bp GTGTTCGACGAAAGCTGTTCTCTCTTCTCATGGTTATaGAGGCTGCATCTTCGGGGATCTCTTCCACACTGG +
Preference number: 6 (lower is better)
Translates to: VFDESCSLFSWL*RLHLRGSLPHW
Trigger: CCAGTGTGGAAGAGATCCCCGAAGATGCAGCCTCCATAACCATGAGAAGAGAGAACAGCTTTCGTCGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp TCAGCAAAACCAGGAGCCATGTGCCTAGGTAGAGGCTaGGATTGGTATATCGAACAGCAGGGACTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: SAKPGAMCLGRG*DWYIEQQGLWL
Trigger: AAGCCACAGTCCCTGCTGTTCGATATACCAATCCAAGCCTCTACCTAGGCACATGGCTCCTGGTTTTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS CAA 72 bp TCAAGGGAAAGTTACCAGGACAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: SRESYQDKGILA*TLILVQARQPG
Trigger: GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGTAACTTTCCCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS TCA 72 bp GTGAGCCAGCTCCAAGGCCTTCCAAATCTCCTCATCTaGGTAGTTGTTGAAAGGGTCGAGATTCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: VSQLQGLPNLLI*VVVERVEIHPQ
Trigger: CTGAGGATGAATCTCGACCCTTTCAACAACTACTCAGATGAGGAGATTTGGAAGGCCTTGGAGCTGGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS GCA 72 bp AATCGCCATGATGCTGATGTACCCTTGCCTGAAACATaGAGCGCGCTCACACAGACACTCAAGGGAAAGTTA +
Preference number: 6 (lower is better)
Translates to: NRHDADVPLPET*SALTQTLKGKL
Trigger: TAACTTTCCCTTGAGTGTCTGTGTGAGCGCGCTGCATGTTTCAGGCAAGGGTACATCAGCATCATGGCGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370434.1
CDS CAA 72 bp CTTTTCAACATCTTCCAGGACAAGGGCATCTTGGCTTaGACTCTGATTCTTGTTCAAGCCAGGCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LFNIFQDKGILA*TLILVQARQPG
Trigger: GCCAGGCTGCCTGGCTTGAACAAGAATCAGAGTCAAAGCCAAGATGCCCTTGTCCTGGAAGATGTTGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp TTCAAGGAGTTTCTCAGGGACTTCAGATGCCTGCCATaGGACCTAGAACTGCGGCTAAGTGTTCGACGAAAG +
Preference number: 6 (lower is better)
Translates to: FKEFLRDFRCLP*DLELRLSVRRK
Trigger: CTTTCGTCGAACACTTAGCCGCAGTTCTAGGTCCAATGGCAGGCATCTGAAGTCCCTGAGAAACTCCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 90 bp GCAAGCCACCTGTTGGAGGTGATCCAGGAAAAGACACATTTCTGGTaGGTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: ASHLLEVIQEKTHFW*VSILTSLCFRNRCW
Trigger: CCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACACCAACCAGAAATGTGTCTTTTCCTGGATCACCTCCAACAGGTGGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp CCAAGGCCTTCCAAATCTCCTCATCTGAGTAGTTGTTaGAAGGGTCGAGATTCATCCTCAGGCTTCCAGAGA +
Preference number: 6 (lower is better)
Translates to: PRPSKSPHLSSC*KGRDSSSGFQR
Trigger: TCTCTGGAAGCCTGAGGATGAATCTCGACCCTTTCAACAACTACTCAGATGAGGAGATTTGGAAGGCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000647814.1
ENST00000648523.1
ENST00000649459.1
CDS GCA 72 bp ATCCTCACCTCATTGTGTTTCAGAAATCGCTGCTGGTaGTCAAAGGCACGGATAACTGGCAAACCTGATACG +
Preference number: 6 (lower is better)
Translates to: ILTSLCFRNRCW*SKARITGKPDT
Trigger: CGTATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 72 bp GTGTCAATCCTCACCTCATTGTGTTTCAGAAATCGCTaGTGGTGCTCAAAGGCACGGATAACTGGCAAACCT +
Preference number: 6 (lower is better)
Translates to: VSILTSLCFRNR*WCSKARITGKP
Trigger: AGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp ATCTGTAGAACACTTGACCACAGCATGTGCATGAAGTaGGTCACATCCATGAGCTTCTGGGCATCCACAGAC +
Preference number: 6 (lower is better)
Translates to: ICRTLDHSMCMK*VTSMSFWASTD
Trigger: GTCTGTGGATGCCCAGAAGCTCATGGATGTGACCAACTTCATGCACATGCTGTGGTCAAGTGTTCTACAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 72 bp ACAGGAACCAGGAGTTTTTCTGTACACACCATTGTCTaGTGTATTGGATCAGCAAAACCAGGAGCCATGTGC +
Preference number: 6 (lower is better)
Translates to: TGTRSFSVHTIV*CIGSAKPGAMC
Trigger: GCACATGGCTCCTGGTTTTGCTGATCCAATACAGCAGACAATGGTGTGTACAGAAAAACTCCTGGTTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS GCA 72 bp AGCTCCGTAGACTCCAACTCTCATGTCCCTCTGAGATaGTGGATAGTCGGTGCTATTGAAGATTTTAGAGTC +
Preference number: 6 (lower is better)
Translates to: SSVDSNSHVPLR*WIVGAIEDFRV
Trigger: GACTCTAAAATCTTCAATAGCACCGACTATCCAGCATCTCAGAGGGACATGAGAGTTGGAGTCTACGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 72 bp ACTGCATGGCTTTGTCAAAATTGCAGTCATGTCGAATaGCAGATGTGTCCAAGTCATCCCCTCCCAAGTACT +
Preference number: 6 (lower is better)
Translates to: TAWLCQNCSHVE*QMCPSHPLPST
Trigger: AGTACTTGGGAGGGGATGACTTGGACACATCTGCCATTCGACATGACTGCAATTTTGACAAAGCCATGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 72 bp TCAATCCTCACCTCATTGTGTTTCAGAAATCGCTGCTaGTGCTCAAAGGCACGGATAACTGGCAAACCTGAT +
Preference number: 6 (lower is better)
Translates to: SILTSLCFRNRC*CSKARITGKPD
Trigger: ATCAGGTTTGCCAGTTATCCGTGCCTTTGAGCACCAGCAGCGATTTCTGAAACACAATGAGGTGAGGATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp GAATTGTCACCCTGTAAGAGTGTCCGGATCAGAGTCTaGAATTGGAAAGTGCCACAGAGTATCGAGAGAATC +
Preference number: 6 (lower is better)
Translates to: ELSPCKSVRIRV*NWKVPQSIERI
Trigger: GATTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGACTCTGATCCGGACACTCTTACAGGGTGACAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS GCA 72 bp GTAAGAGTGTCCGGATCAGAGTCTGAAATTGGAAAGTaGCACAGAGTATCGAGAGAATCCAGAATAGGGACA +
Preference number: 6 (lower is better)
Translates to: VRVSGSESEIGK*HRVSRESRIGT
Trigger: TGTCCCTATTCTGGATTCTCTCGATACTCTGTGGCACTTTCCAATTTCAGACTCTGATCCGGACACTCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000370434.1
ENST00000496621.1
ENST00000647814.1
ENST00000647836.1
ENST00000648324.1
ENST00000648689.1
ENST00000649493.1
ENST00000649932.1
CDS GCA 72 bp GATAAGACAATCTGTAGAACACTTGACCACAGCATGTaGATGAAGTTGGTCACATCCATGAGCTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: DKTICRTLDHSM*MKLVTSMSFWA
Trigger: TGCCCAGAAGCTCATGGATGTGACCAACTTCATGCACATGCTGTGGTCAAGTGTTCTACAGATTGTCTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 72 bp TCAGGTTCACTGTTTCTCCAACGGTGTACTCCTTCCTaGCCAAGTTGGATAGGGTCAATGCCTTCTTATATA +
Preference number: 6 (lower is better)
Translates to: SGSLFLQRCTPS*PSWIGSMPSYI
Trigger: TATATAAGAAGGCATTGACCCTATCCAACTTGGCCAGGAAGGAGTACACCGTTGGAGAAACAGTGAACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CCA 72 bp TCCGTAGACTCCAACTCTCATGTCCCTCTGAGATGCTaGATAGTCGGTGCTATTGAAGATTTTAGAGTCACT +
Preference number: 6 (lower is better)
Translates to: SVDSNSHVPLRC*IVGAIEDFRVT
Trigger: AGTGACTCTAAAATCTTCAATAGCACCGACTATCCAGCATCTCAGAGGGACATGAGAGTTGGAGTCTACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS GCA 72 bp GAGATATCCAATCCACAAATATGTGTCACGGTCACTTaGAAAGGAGATCAGCAATTTCAGCAGCTGAGGACT +
Preference number: 6 (lower is better)
Translates to: EISNPQICVTVT*KGDQQFQQLRT
Trigger: AGTCCTCAGCTGCTGAAATTGCTGATCTCCTTTGCAAGTGACCGTGACACATATTTGTGGATTGGATATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp AGAGATATCCAATCCACAAATATGTGTCACGGTCACTaGCAAAGGAGATCAGCAATTTCAGCAGCTGAGGAC +
Preference number: 6 (lower is better)
Translates to: RDIQSTNMCHGH*QRRSAISAAED
Trigger: GTCCTCAGCTGCTGAAATTGCTGATCTCCTTTGCAAGTGACCGTGACACATATTTGTGGATTGGATATCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp TTTGTGTACTCAGTTATTCGCTCAACAGCCACAATGTaGGTCTCTATTTCTGATGTCATCCTCACCAGCCAG +
Preference number: 6 (lower is better)
Translates to: FVYSVIRSTATM*VSISDVILTSQ
Trigger: CTGGCTGGTGAGGATGACATCAGAAATAGAGACCAACATTGTGGCTGTTGAGCGAATAACTGAGTACACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS CAA 72 bp TCTTATCAGTCACCCAGGGTGCCTCATTTTCCACTTTaGTGTACTCAGTTATTCGCTCAACAGCCACAATGT +
Preference number: 6 (lower is better)
Translates to: SYQSPRVPHFPL*CTQLFAQQPQC
Trigger: ACATTGTGGCTGTTGAGCGAATAACTGAGTACACAAAAGTGGAAAATGAGGCACCCTGGGTGACTGATAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647814.1
ENST00000649459.1
CDS CAA 90 bp CTATTGAAGATTTTAGAGTCACTGGTCCAAGCACTGAGCCAGAGGTaGGATCCAATAAAAGCCACAGAATTCATCACAAACGCAAGGATG +
Preference number: 6 (lower is better)
Translates to: LLKILESLVQALSQR*DPIKATEFITNARM
Trigger: CATCCTTGCGTTTGTGATGAATTCTGTGGCTTTTATTGGATCCAACCTCTGGCTCAGTGCTTGGACCAGTGACTCTAAAATCTTCAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp ATTTTAGAGTCACTGGTCCAAGCACTGAGCCAGAGGTaGGATCCAATAAAAGCCACAGAATTCATCACAAAC +
Preference number: 6 (lower is better)
Translates to: ILESLVQALSQR*DPIKATEFITN
Trigger: GTTTGTGATGAATTCTGTGGCTTTTATTGGATCCAACCTCTGGCTCAGTGCTTGGACCAGTGACTCTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp CTCATAGGTGCTCGAAGGATATTGTTCAGCAGTTGCTaGTGCAAGATATTTGATGCATGGACGAAACCAAAG +
Preference number: 6 (lower is better)
Translates to: LIGARRILFSSC*CKIFDAWTKPK
Trigger: CTTTGGTTTCGTCCATGCATCAAATATCTTGCACAAGCAACTGCTGAACAATATCCTTCGAGCACCTATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp CTGTTGGAGGTGATCCAGGAAAAGACACATTTCTGGTaGGTGTCAATCCTCACCTCATTGTGTTTCAGAAAT +
Preference number: 6 (lower is better)
Translates to: LLEVIQEKTHFW*VSILTSLCFRN
Trigger: ATTTCTGAAACACAATGAGGTGAGGATTGACACCAACCAGAAATGTGTCTTTTCCTGGATCACCTCCAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp AGATCAGCAATTTCAGCAGCTGAGGACTCACAAACGTaGAGATGTCATTCACTAGCTTCAGTAGGAATGATT +
Preference number: 6 (lower is better)
Translates to: RSAISAAEDSQT*RCHSLASVGMI
Trigger: AATCATTCCTACTGAAGCTAGTGAATGACATCTTCACGTTTGTGAGTCCTCAGCTGCTGAAATTGCTGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp GTTAACTGGAAGACGAATATTACTACACACTGTAGTTaGCTAAAGGCCAGCAGGTTCTTGAGCTCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: VNWKTNITTHCS*LKASRFLSSFF
Trigger: GAAGAAAGAGCTCAAGAACCTGCTGGCCTTTAGTCAACTACAGTGTGTAGTAATATTCGTCTTCCAGTTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS TCA 72 bp AAGGATATTGTTCAGCAGTTGCTTGTGCAAGATATTTaGTGCATGGACGAAACCAAAGGCACTCCAGAAATG +
Preference number: 6 (lower is better)
Translates to: KDIVQQLLVQDI*CMDETKGTPEM
Trigger: CATTTCTGGAGTGCCTTTGGTTTCGTCCATGCATCAAATATCTTGCACAAGCAACTGCTGAACAATATCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1
CDS CAA 72 bp GAAGGATATTGTTCAGCAGTTGCTTGTGCAAGATATTaGATGCATGGACGAAACCAAAGGCACTCCAGAAAT +
Preference number: 6 (lower is better)
Translates to: EGYCSAVACARY*MHGRNQRHSRN
Trigger: ATTTCTGGAGTGCCTTTGGTTTCGTCCATGCATCAAATATCTTGCACAAGCAACTGCTGAACAATATCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647814.1