RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCC12 (Homo sapiens)

Ensembl gene IDs: ENSG00000140798

Ensembl transcript IDs: ENST00000311303.7, ENST00000497206.6, ENST00000526251.1, ENST00000527640.1, ENST00000528693.5, ENST00000529084.5, ENST00000529504.5, ENST00000532355.1, ENST00000532494.5, ENST00000533185.1, ENST00000533639.5, ENST00000534418.5, ENST00000649885.1

Found 1472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGTGCTTCCAGGTGCCAGGCACTCCTTCCTCCACGTTCCGTGGATaGGAGGGGCTGAAGACCAGGGCTGCCTGCGGAGAGGACAGCCCC +
Preference number: 1 (lower is better)
Translates to: ECFQVPGTPSSTFRG*EGLKTRAACGEDSP
Trigger: GGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAACGTGGAGGAAGGAGTGCCTGGCACCTGGAAGCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 90 bp ACACATGCTGACCGATGTCTGCCAGCACCGCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGT +
Preference number: 1 (lower is better)
Translates to: THADRCLPAPRRPHT*SCCPGAHRSSVSPC
Trigger: ACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCATGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 90 bp CATGCTTGCAGTGTACACCCACTGGTACACATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTCACACATGGTCCTGTTGCCCTGGGG +
Preference number: 1 (lower is better)
Translates to: HACSVHPLVHMLTDV*QHRADLTHGPVALG
Trigger: CCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTGGGTGTACACTGCAAGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR TCA 90 bp CCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAGGTCGAAATGTATTCCCTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: PRLGQSLGQVPTLRG*VHSGTQVEMYSLSS
Trigger: GCTGCTCAGGGAATACATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR TCA 90 bp AGCATGAACACCATGCTTGCAGTGTACACCCACTGGTACACATGCTaGCCGATGTCTGCCAGCACCGCGCCGACCTCACACATGGTCCTG +
Preference number: 1 (lower is better)
Translates to: SMNTMLAVYTHWYTC*PMSASTAPTSHMVL
Trigger: CAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR CCA 90 bp GGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGCCAGACTaGTTAGGGTTCAAGCCCTATCTCTGTCCCTTCCTTCCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: GFVVKGLGAGPVEPD*LGFKPYLCPFLPGH
Trigger: ATGCCCAGGAAGGAAGGGACAGAGATAGGGCTTGAACCCTAACCAGTCTGGCTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR GCA 90 bp GTCGAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTaGGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTC +
Preference number: 1 (lower is better)
Translates to: VEMYSLSSSTEVNLA*VSVPVRTHTWSSPL
Trigger: GAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 90 bp CACAAAATATGGACCTCAGGCCACGAGACCAAGGGCCCACAACTCTaGAATGGAGCAGAGACCACTGAGGCAGGCAATGACAGGTGGAAC +
Preference number: 1 (lower is better)
Translates to: HKIWTSGHETKGPQL*NGAETTEAGNDRWN
Trigger: GTTCCACCTGTCATTGCCTGCCTCAGTGGTCTCTGCTCCATTGCAGAGTTGTGGGCCCTTGGTCTCGTGGCCTGAGGTCCATATTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR GCA 90 bp GACGAAGCCTTTGGTGACGCCAAACACCAGCATGAACACCATGCTTaGAGTGTACACCCACTGGTACACATGCTGACCGATGTCTGCCAG +
Preference number: 1 (lower is better)
Translates to: DEAFGDAKHQHEHHA*SVHPLVHMLTDVCQ
Trigger: CTGGCAGACATCGGTCAGCATGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGTCACCAAAGGCTTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 90 bp TTCATTAGATGCTGTCATTCATGGCTGCCACAAGTGTTTCCCGAGTaGTTCCAGGTGCCAGGCACTCCTTCCTCCACGTTCCGTGGATGG +
Preference number: 1 (lower is better)
Translates to: FIRCCHSWLPQVFPE*FQVPGTPSSTFRGW
Trigger: CCATCCACGGAACGTGGAGGAAGGAGTGCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCATCTAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR TCA 90 bp ATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTaGACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCA +
Preference number: 1 (lower is better)
Translates to: MVSTVQPLKASLMVF*TRVSVLESIEAVAS
Trigger: TGAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR TCA 90 bp AGAGTAAACCAAAGCGAGTGTGGGCAGAAAAGGAGTCATAGGAGGTaGTTCATCTCTCAATGCATCTGGGAGGGGTGTCCGCCAGGCTCC +
Preference number: 1 (lower is better)
Translates to: RVNQSECGQKRSHRR*FISQCIWEGCPPGS
Trigger: GGAGCCTGGCGGACACCCCTCCCAGATGCATTGAGAGATGAATCACCTCCTATGACTCCTTTTCTGCCCACACTCGCTTTGGTTTACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 90 bp GCTCCACAGCTGTGTTTCAGCGAGTTCATTAGATGCTGTCATTCATaGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTGCCAGGCACT +
Preference number: 1 (lower is better)
Translates to: APQLCFSEFIRCCHS*LPQVFPECFQVPGT
Trigger: AGTGCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCATCTAATGAACTCGCTGAAACACAGCTGTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR GCA 90 bp CACAGCTGTGTTTCAGCGAGTTCATTAGATGCTGTCATTCATGGCTaGCACAAGTGTTTCCCGAGTGCTTCCAGGTGCCAGGCACTCCTT +
Preference number: 1 (lower is better)
Translates to: HSCVSASSLDAVIHG*HKCFPSASRCQALL
Trigger: AAGGAGTGCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCATCTAATGAACTCGCTGAAACACAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 90 bp TGCTCCAAGAATAGTGCTCAGTACAGGACAGTGGTCCACAAAATATaGACCTCAGGCCACGAGACCAAGGGCCCACAACTCTGCAATGGA +
Preference number: 1 (lower is better)
Translates to: CSKNSAQYRTVVHKI*TSGHETKGPQLCNG
Trigger: TCCATTGCAGAGTTGTGGGCCCTTGGTCTCGTGGCCTGAGGTCCATATTTTGTGGACCACTGTCCTGTACTGAGCACTATTCTTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR GCA 90 bp TTCCTCTCTCTCAGCAGGGCTCTCCTTGAAGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGGATCCTTGAACTGCAATCCTCGCAG +
Preference number: 1 (lower is better)
Translates to: FLSLSRALLEGFHHC*IVKVFRILELQSSQ
Trigger: CTGCGAGGATTGCAGTTCAAGGATCCTGAACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 90 bp AGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTaGAATGAAGGAGAGGAGAGGACAGGGAGCCAGATTTCCAAGGAC +
Preference number: 1 (lower is better)
Translates to: RASHRCDSQRDPSCT*NEGEERTGSQISKD
Trigger: GTCCTTGGAAATCTGGCTCCCTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 90 bp GTGAACCAGGGTGACCGGCTGACATTCTCCACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATGCGTAACAGAATGAAGAAGCCTACA +
Preference number: 1 (lower is better)
Translates to: VNQGDRLTFSTFLSS*TPLWKMRNRMKKPT
Trigger: TGTAGGCTTCTTCATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATGTCAGCCGGTCACCCTGGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR TCA 90 bp GAGCCTCTTCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCT +
Preference number: 1 (lower is better)
Translates to: EPLPPLESAARTSTI*LLLLVTSQMQNLAS
Trigger: AGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGAAGAGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR GCA 90 bp AACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTaGCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGG +
Preference number: 1 (lower is better)
Translates to: NDDFPEPVLPTIPTV*PLCMFKFRLSRTRG
Trigger: CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 90 bp ATCTTCCTCTCTCTCAGCAGGGCTCTCCTTGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTCAGGATCCTTGAACTGCAATCCTCG +
Preference number: 1 (lower is better)
Translates to: IFLSLSRALLEGFHH*CIVKVFRILELQSS
Trigger: CGAGGATTGCAGTTCAAGGATCCTGAACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 90 bp CTTTCCCCTTGTGCCTTGATATCAGATCTGGAGCCCCACAGAAGCTaGAGCCCTACTGTTCTTGTGCTTGAAATAGCTTCTGTTCACTTA +
Preference number: 1 (lower is better)
Translates to: LSPCALISDLEPHRS*SPTVLVLEIASVHL
Trigger: TAAGTGAACAGAAGCTATTTCAAGCACAAGAACAGTAGGGCTGCAGCTTCTGTGGGGCTCCAGATCTGATATCAAGGCACAAGGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 90 bp GGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAAT +
Preference number: 1 (lower is better)
Translates to: GVSLSYCTYKQDRIL*DHSQLGSEVFQAEN
Trigger: ATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
3UTR TCA 90 bp AAGGGTCTATTGGAGGAAATAGTATGGAAATTGGAATATCTTCAGTaGAATAATTGCAAGGCGACATTTCAGGGTAATTTCCTACCGCGT +
Preference number: 1 (lower is better)
Translates to: KGLLEEIVWKLEYLQ*NNCKATFQGNFLPR
Trigger: ACGCGGTAGGAAATTACCCTGAAATGTCGCCTTGCAATTATTTCACTGAAGATATTCCAATTTCCATACTATTTCCTCCAATAGACCCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR TCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CCGATGTCTGCCAGCACCGCGCCGACCTCACACATGGTCCTGTTGCCCTGGGGCCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 2 (lower is better)
Translates to: PMSASTAPTSHMVLLPWGPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...GCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp AGGCCCTGCATGGAGGAGGTGATGTGGGTGAACCAGGGTGACCGGCTGACATTCCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 2 (lower is better)
Translates to: RPCMEEVMWVNQGDRLTFRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...GAATGTCAGCCGGTCACCCTGGTTCACCCACATCACCTCCTCCATGCAGGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 2 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTEKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CACACATGGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAGCCCACCAAGTGGGGTaGCATGGACTGAGTATGGCA +
Preference number: 2 (lower is better)
Translates to: HTWSCCPGAHRSSVSPCPAHQVG*HGLSMA
Trigger: TGCCATACTCAGTCCATGTCACCCCACTTGGTGGGC...TGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTTCCATTAGCTGGGTCTaGCCCGGTTCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRASISWV*PGSPPR
Trigger: TCTGGGTGGTGAACCGGGGCAGACCCAGCTAATGGA...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp GCCAGGCACTCCTTCCTCCACGTTCCGTGGATGGGAGGGGCTGAAGACCAGGGCCCAAGGACGAGAGGATaGATGCGGAGCAGGTTTTCT +
Preference number: 2 (lower is better)
Translates to: ARHSFLHVPWMGGAEDQGPRTRG*MRSRFS
Trigger: AGAAAACCTGCTCCGCATCCATCCTCTCGTCCTTGG...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAACGTGGAGGAAGGAGTGCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 2 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CCGATGTCTGCCAGCACCGCGCCGACCTCACACATGGTCCTGTTGCCCTGGGGCCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: PMSASTAPTSHMVLLPWGLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...GCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 2 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp ACGCCAAACACCAGCATGAACACCATGCTTGCAGTGTACACCCACTGGTACACAAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: TPNTSMNTMLAVYTHWYTKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...TGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: SLNYGEELGPHKAADVPLKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR CCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGAGCTCACTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 2 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLSSLRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCT...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 2 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp TGCTGTCATTCATGGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTGCCAGGCTTCCTCCACGTTCCGTaGATGGGAGGGGCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: CCHSWLPQVFPECFQVPGFLHVP*MGGAED
Trigger: GTCTTCAGCCCCTCCCATCCACGGAACGTGGAGGAA...GCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 2 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR CAA 90 bp GGTCGAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCT +
Preference number: 2 (lower is better)
Translates to: GRNVFPEQLHGGEFG*RLCSRSHTHLEQSA
Trigger: AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 2 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR GCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGCATGTGATGACCTCGTaGTCCAAGAATAGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVEHVMTS*SKNSAQ
Trigger: CTGAGCACTATTCTTGGAGCACGAGGTCATCACATG...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 2 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAACCAGAGACCCAGCCTGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 2 (lower is better)
Translates to: CPGAHRSSVSPCPTRDPACVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...GGCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp CAGAGACCCAGCCACCAGTTGCTGAAGGCAGCGCTGCCAATCATCAGGAGGAAGAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 2 (lower is better)
Translates to: QRPSHQLLKAALPIIRRKSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...CTTCCTCCTGATGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCCAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 2 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 2 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 2 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp CAAACCCTCAGAAGTCACTCTCCCCCAGGGATGATACTGATGACCATCACTGTCGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 2 (lower is better)
Translates to: QTLRSHSPPGMILMTITVDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...GACAGTGATGGTCATCAGTATCATCCCTGGGGGAGAGTGACTTCTGAGGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 2 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 2 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCGCTGAAGACCAGGGCTaGCTGCGGAGAGGACAGCCC +
Preference number: 2 (lower is better)
Translates to: LYNLTSAASNIANAESGFAEDQG*LRRGQP
Trigger: GGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGC...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 2 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: SLNYGEELGPHKAADVPLPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp GATGCAGCTCTCCTTCTTGCCATAGGCGTGAATGATGCCCAGGCCCTGCATGGACGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: DAALLLAIGVNDAQALHGRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...TCCATGCAGGGCCTGGGCATCATTCACGCCTATGGCAAGAAGGAGAGCTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTCCTCCCAAGGCTaGATGCAGAAACAGGGACCA +
Preference number: 2 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGGSSQG*MQKQGP
Trigger: TGGTCCCTGTTTCTGCATCCAGCCTTGGGAGGAGCC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 90 bp AGAGAGGAGGATGCCATCAGTGTGGTCTTGGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGCATGAACACCATGCTTGCAGTGTAC +
Preference number: 2 (lower is better)
Translates to: REEDAISVVLVKTKP*VTPNTSMNTMLAVY
Trigger: GTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCACCAAGACCACACTGATGGCATCCTCCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTCAGTCAAGATGGAAGTaGGTGGGGTTAAACGAGAAG +
Preference number: 2 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASQSRWK*VGLNEK
Trigger: CTTCTCGTTTAACCCCACTCACTTCCATCTTGACTG...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 2 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCCCTCCCAAGGCTGGATaGAGAAACAGGGACCAGCAG +
Preference number: 2 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLPPKAG*RNRDQQ
Trigger: CTGCTGGTCCCTGTTTCTGCATCCAGCCTTGGGAGG...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 2 (lower is better)
Translates to: DIHLINKDCATGWLHQTKVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp ATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGATCAGAAAGACACACCTaGGCCTCTCAGCAGCCCCGA +
Preference number: 2 (lower is better)
Translates to: IGVTLKGIQVVPAMKERRSERHT*ASQQPR
Trigger: TCGGGGCTGCTGAGAGGCCCAGGTGTGTCTTTCTGA...TCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGCAGGCAATGACAGGTaGAACCCTGCCGAGAGGCAG +
Preference number: 2 (lower is better)
Translates to: NLASLQGLQACQTQSPSHAGNDR*NPAERQ
Trigger: CTGCCTCTCGGCAGGGTTCCACCTGTCATTGCCTGC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACTGGGGTGACATGGACTaGGTATGGCAGTGGGGACAA +
Preference number: 2 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNWGDMD*VWQWGQ
Trigger: TTGTCCCCACTGCCATACTCAGTCCATGTCACCCCA...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 2 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 2 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGAGTTCTTGGTCAGTCTaGTTTCACTCTCCAAAAATA +
Preference number: 2 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVESSWSV*FHSPKI
Trigger: TATTTTTGGAGAGTGAAATCAGACTGACCAAGAACT...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp CAAACCCTCAGAAGTCACTCTCCCCCAGGGATGATACTGATGACCATCACTGTCAAGTTGTACCTGCAATaGAGGAGAGGAGAGGACAGG +
Preference number: 2 (lower is better)
Translates to: QTLRSHSPPGMILMTITVKLYLQ*RRGEDR
Trigger: CCTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTT...GACAGTGATGGTCATCAGTATCATCCCTGGGGGAGAGTGACTTCTGAGGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR GCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: SSSRISRQDLYNLTSAASMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATAAGGGCCCACAACTCTaGAATGGAGCAGAGACCACT +
Preference number: 2 (lower is better)
Translates to: ARASHRCDSQRDPSCTCNKGPQL*NGAETT
Trigger: AGTGGTCTCTGCTCCATTGCAGAGTTGTGGGCCCTT...ATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: SRRMIFELRRRARATQSSVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 2 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 2 (lower is better)
Translates to: SGFSARTSGLSNSITFPFATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 2 (lower is better)
Translates to: SRRMIFELRRRARATQSSGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 2 (lower is better)
Translates to: FQAENADIHLINKDCATGQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 2 (lower is better)
Translates to: SSSRISRQDLYNLTSAASRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR GCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGTTCTCTCCAGAACCTaGCAGAGCATCTCATCGGTG +
Preference number: 2 (lower is better)
Translates to: SRRMIFELRRRARATQSSVLSRT*QSISSV
Trigger: CACCGATGAGATGCTCTGGCAGGTTCTGGAGAGAAC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529504.5
ENST00000649885.1
3UTR-3UTR GCA 90 bp AGGAGGTGGCATGTGATGACCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACACTGCCTTTCCCCTTGTaGCTTGATATCAGATCTGGA +
Preference number: 2 (lower is better)
Translates to: RRWHVMTSCSKNSAQYRTLPFPL*LDIRSG
Trigger: TCCAGATCTGATATCAAGGCACAAGGGGAAAGGCAG...TGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGAGCTCACTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 2 (lower is better)
Translates to: IQSFTLQICVITTCHPVKSSLRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCT...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR CAA 90 bp ACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCA +
Preference number: 2 (lower is better)
Translates to: TVPTNRTGSCGITVS*VLRSSKLRMQISTS
Trigger: TGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
3UTR CAA 90 bp CCAAGTTGTACAAACAGGACAGGATCCTGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCA +
Preference number: 2 (lower is better)
Translates to: PSCTNRTGSCGITVS*VLRSSKLRMQISTS
Trigger: TGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTGTACAACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529504.5
3UTR-3UTR TCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 2 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 2 (lower is better)
Translates to: SSRRMIFELRRRARATQSPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 2 (lower is better)
Translates to: LYNLTSAASNIANAESGFDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 2 (lower is better)
Translates to: SLNYGEELGPHKAADVPLALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 2 (lower is better)
Translates to: SRRMIFELRRRARATQSSGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 2 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLRKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTTTCCCCTTGTGCCTTaGTATCAGATCTGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: SGFSARTSGLSNSITFPFFPLVP*YQIWSP
Trigger: GGGGCTCCAGATCTGATATCAAGGCACAAGGGGAAA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR GCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCATCCATTAGCTGGGTCTaGCCCGGTTCACCACCCAGA +
Preference number: 2 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPSISWV*PGSPPR
Trigger: TCTGGGTGGTGAACCGGGGCAGACCCAGCTAATGGA...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 2 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLNGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp CAAACCCTCAGAAGTCACTCTCCCCCAGGGATGATACTGATGACCATCACTGTCAGCGAGTTCATTAGATaGTGTCATTCATGGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QTLRSHSPPGMILMTITVSEFIR*CHSWLP
Trigger: TGGCAGCCATGAATGACAGCATCTAATGAACTCGCT...GACAGTGATGGTCATCAGTATCATCCCTGGGGGAGAGTGACTTCTGAGGGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 2 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 2 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp AGATTTCCAAGGACGAGAGGATGGATGCGGAGCAGGTTTTCTGTAGCATGTGGACGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 2 (lower is better)
Translates to: RFPRTRGWMRSRFSVACGRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...TCCACATGCTACAGAAAACCTGCTCCGCATCCATCCTCTCGTCCTTGGAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 2 (lower is better)
Translates to: FQAENADIHLINKDCATGVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAGGACACTTTTCAGAGTaGCCATTGTTAAACCTGATG +
Preference number: 2 (lower is better)
Translates to: NYGEELGPHKAADVPLLRGHFSE*PLLNLM
Trigger: CATCAGGTTTAACAATGGCCACTCTGAAAAGTGTCC...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGGAATGCACTTTGCAATaGATAGCTGTATACACGGGG +
Preference number: 2 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQECTLQ*IAVYTG
Trigger: CCCCGTGTATACAGCTATCCATTGCAAAGTGCATTC...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAGTGGTCCACAAAATATaGACCTCAGGCCACGAGACC +
Preference number: 2 (lower is better)
Translates to: VTSQMQNLASLQGLQACQVVHKI*TSGHET
Trigger: GGTCTCGTGGCCTGAGGTCCATATTTTGTGGACCAC...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: QNLASLQGLQACQTQSPSLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 2 (lower is better)
Translates to: VFQAENADIHLINKDCATDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR GCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 2 (lower is better)
Translates to: RVTNKATVKVRMFMRTSISRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 2 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAAGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 2 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 2 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCAGGCCAGCCATGCCCTaGGGACATCACAAAGTTCTT +
Preference number: 2 (lower is better)
Translates to: LYNLTSAASNIANAESGFRPAMP*GHHKVL
Trigger: AAGAACTTTGTGATGTCCCCAGGGCATGGCTGGCCT...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTTTATTGTGTCTCTCATaGATGTTCTCTCCAGAACCT +
Preference number: 2 (lower is better)
Translates to: RERGRVSNPNLPLHVSAALLCLS*MFSPEP
Trigger: AGGTTCTGGAGAGAACATTCATGAGAGACACAATAA...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTACAGAGAGAGCTAACTaGGAAACTGCCTTTCCCCTT +
Preference number: 2 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLTERAN*ETAFPL
Trigger: AAGGGGAAAGGCAGTTTCTCAGTTAGCTCTCTCTGT...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR GCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 2 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR GCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCCCCTACTTCATCTGGTaGTGTATGGGAGAAATGTTC +
Preference number: 2 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLPYFIW*CMGEMF
Trigger: GAACATTTCTCCCATACAGCACCAGATGAAGTAGGG...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp CCAGTCAAGATGGAAGTGAGTGGGGTTAAACGAGAAGAAAATTCTGCTCTTTTTCCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: PVKMEVSGVKREENSALFPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...AAAAAGAGCAGAATTTTCTTCTCGTTTAACCCCACTCACTTCCATCTTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR CCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: ISRQDLYNLTSAASNIANFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 2 (lower is better)
Translates to: NLASLQGLQACQTQSPSHSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR CAA 90 bp AGTTTCATTATAAACAGGACAGGATCCTGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCA +
Preference number: 2 (lower is better)
Translates to: SFIINRTGSCGITVS*VLRSSKLRMQISTS
Trigger: TGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTATAATGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532494.5
3UTR-3UTR TCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAACTGGGGTGGTTTTGGTaGAAACACATGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: LGSEVFQAENADIHLINKLGWFW*KHMRNP
Trigger: AGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAG...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 2 (lower is better)
Translates to: QNLASLQGLQACQTQSPSKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR TCA 90 bp ATGGTTTCGTGTCTTATACATGCAAACAGCCAAACCCTCAGAAGTCACTCTCCCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 2 (lower is better)
Translates to: MVSCLIHANSQTLRSHSPRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GGGAGAGTGACTTCTGAGGGTTTGGCTGTTTGCATGTATAAGACACGAAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCGCTGTCCAGAGCCACTaGAATATCTGCTCAGTGTAT +
Preference number: 2 (lower is better)
Translates to: LYNLTSAASNIANAESGFAVQSH*NICSVY
Trigger: ATACACTGAGCAGATATTCCAGTGGCTCTGGACAGC...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp AGGAGGTGGCATGTGATGACCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACAACTGATAAAAATTCTTaGCAGAGAAAGAGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: RRWHVMTSCSKNSAQYRTTDKNS*QRKRES
Trigger: ACTCTCCCTCTTTCTCTGCCAAGAATTTTTATCAGT...TGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAACTCAGTACAGGACAGTaGTCCACAAAATATGGACCT +
Preference number: 2 (lower is better)
Translates to: VTSQMQNLASLQGLQACQLSTGQ*STKYGP
Trigger: AGGTCCATATTTTGTGGACCACTGTCCTGTACTGAG...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 2 (lower is better)
Translates to: SSRRMIFELRRRARATQSKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR TCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGTGCTCAGTGTATGAATaGATACAGAAGCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: LTSAASNIANAESGFSARCSVYE*IQKHLA
Trigger: AGCAAGATGCTTCTGTATTCATTCATACACTGAGCA...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCGTAGCAGAGTGGGTTTaGACTGATAAAAATTCTTGG +
Preference number: 2 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLVAEWV*TDKNSW
Trigger: CCAAGAATTTTTATCAGTTCAAACCCACTCTGCTAC...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 2 (lower is better)
Translates to: VFQAENADIHLINKDCATSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp ATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGACTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 2 (lower is better)
Translates to: IGVTLKGIQVVPAMKERRLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...TCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 2 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTATCTGCTCAGTGTATaGATGAATACAGAAGCATCT +
Preference number: 2 (lower is better)
Translates to: SGFSARTSGLSNSITFPFYLLSV*MNTEAS
Trigger: AGATGCTTCTGTATTCATTCATACACTGAGCAGATA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR TCA 90 bp TTCAGGGTAATTTCCTACCGCGTTTTAACGACGAATAAAGAAGATATAAAAGTGCTGGGGTGGTTTTGGTaGAAACACATGAGGAACCCT +
Preference number: 2 (lower is better)
Translates to: FRVISYRVLTTNKEDIKVLGWFW*KHMRNP
Trigger: AGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAG...CACTTTTATATCTTCTTTATTCGTCGTTAAAACGCGGTAGGAAATTACCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR TCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTACTGTTCTTGTGCTTaGAATAGCTTCTGTTCACTT +
Preference number: 2 (lower is better)
Translates to: LYNLTSAASNIANAESGFYCSCA*NSFCSL
Trigger: AAGTGAACAGAAGCTATTTCAAGCACAAGAACAGTA...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR GCA 72 bp CTGCCAGCACCGCGCCGACCTCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGT +
Preference number: 3 (lower is better)
Translates to: LPAPRRPHTWSC*PGAHRSSVSPC
Trigger: ACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR CCA 72 bp GACCGATGTCTGCCAGCACCGCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTG +
Preference number: 3 (lower is better)
Translates to: DRCLPAPRRPHT*SCCPGAHRSSV
Trigger: CACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 3 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 72 bp CATGGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTaGCAGGCACTCCTTCCTCCACGTTCCGTGGATGGG +
Preference number: 3 (lower is better)
Translates to: HGCHKCFPSASR*QALLPPRSVDG
Trigger: CCCATCCACGGAACGTGGAGGAAGGAGTGCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 3 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 3 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR TCA 72 bp ACCAGGGCTGCCTGCGGAGAGGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATCTCACAGAGCCTCTTC +
Preference number: 3 (lower is better)
Translates to: TRAACGEDSPSS*RLLLFISQSLF
Trigger: GAAGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR TCA 72 bp GCCCTGCATGGAGGAGGTGATGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCACCTTCTTGAGCTCCTG +
Preference number: 3 (lower is better)
Translates to: ALHGGGDVGEPG*PADILHLLELL
Trigger: CAGGAGCTCAAGAAGGTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCACATCACCTCCTCCATGCAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 72 bp TGGACCTCAGGCCACGAGACCAAGGGCCCACAACTCTaGAATGGAGCAGAGACCACTGAGGCAGGCAATGAC +
Preference number: 3 (lower is better)
Translates to: WTSGHETKGPQL*NGAETTEAGND
Trigger: GTCATTGCCTGCCTCAGTGGTCTCTGCTCCATTGCAGAGTTGTGGGCCCTTGGTCTCGTGGCCTGAGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGACGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 3 (lower is better)
Translates to: NYGEELGPHKAADVPLLRRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 3 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR TCA 72 bp CACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAGGAACACAGGTCGAAA +
Preference number: 3 (lower is better)
Translates to: HGWASPWDRSPL*GDECIQEHRSK
Trigger: TTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 72 bp AGTGTACACCCACTGGTACACATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTCACACATGGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: SVHPLVHMLTDV*QHRADLTHGPV
Trigger: AACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTGGGTGTACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 3 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGRCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCGGAACCCTTGGGGATTaGGGAGGTGAAGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFGTLGD*GGEGQF
Trigger: AAACTGCCCTTCACCTCCCAAATCCCCAAGGGTTCC...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCGGCACTGGGGTGGTTTaGGTGAAAACACATGAGGAA +
Preference number: 3 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAGTGVV*VKTHEE
Trigger: TTCCTCATGTGTTTTCACCAAAACCACCCCAGTGCC...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 3 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 72 bp TATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTaGGTCTCTGTTCCCGTTCGCACACACACTTGGAGC +
Preference number: 3 (lower is better)
Translates to: YSLSSSTEVNLA*VSVPVRTHTWS
Trigger: GCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 72 bp GTGGAGGAGGGTAGGAGGTGGCATGTGATGACCTCGTaGTCCAAGAATAGTGCTCAGTACAGGACAGTGGTC +
Preference number: 3 (lower is better)
Translates to: VEEGRRWHVMTS*SKNSAQYRTVV
Trigger: GACCACTGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCTACCCTCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: NYGEELGPHKAADVPLLRSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp AGGAGGTGGCATGTGATGACCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACAACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 3 (lower is better)
Translates to: RRWHVMTSCSKNSAQYRTTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...TGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 72 bp GAAACGGCAGCCTCACATCCAGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCCTGCCAGTGGGAGTCG +
Preference number: 3 (lower is better)
Translates to: ETAASHPARPYP*KNGSLACQWES
Trigger: CGACTCCCACTGGCAGGCTAATGAACCGTTTTTCCAAGGATATGGACGAGCTGGATGTGAGGCTGCCGTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR CCA 72 bp TCCCTCAGACAGAACAGCTCCAGGCCAGCCATGCCCTaGGGACATCACAAAGTTCTTGGTCAGTCTGATTTC +
Preference number: 3 (lower is better)
Translates to: SLRQNSSRPAMP*GHHKVLGQSDF
Trigger: GAAATCAGACTGACCAAGAACTTTGTGATGTCCCCAGGGCATGGCTGGCCTGGAGCTGTTCTGTCTGAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 72 bp AGAGGACAGGGAGCCAGATTTCCAAGGACGAGAGGATaGATGCGGAGCAGGTTTTCTGTAGCATGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: RGQGARFPRTRG*MRSRFSVACGG
Trigger: TCCTCCACATGCTACAGAAAACCTGCTCCGCATCCATCCTCTCGTCCTTGGAAATCTGGCTCCCTGTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCACGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: ISRQDLYNLTSAASNIANRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 3 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAACGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 3 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTTCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 3 (lower is better)
Translates to: SSSRISRQDLYNLTSAASSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 3 (lower is better)
Translates to: NYGEELGPHKAADVPLLRAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR TCA 72 bp ACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTaGACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCG +
Preference number: 3 (lower is better)
Translates to: TVQPLKASLMVF*TRVSVLESIEA
Trigger: CGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR CCA 72 bp TTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGGATGATGTATGACAAT +
Preference number: 3 (lower is better)
Translates to: LACVSVPVRTHT*SSPLSWMMYDN
Trigger: ATTGTCATACATCATCCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR CCA 72 bp AATAGTGCTCAGTACAGGACAGTGGTCCACAAAATATaGACCTCAGGCCACGAGACCAAGGGCCCACAACTC +
Preference number: 3 (lower is better)
Translates to: NSAQYRTVVHKI*TSGHETKGPQL
Trigger: GAGTTGTGGGCCCTTGGTCTCGTGGCCTGAGGTCCATATTTTGTGGACCACTGTCCTGTACTGAGCACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 72 bp CCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACAGTaGTCCACAAAATATGGACCTCAGGCCACGAGACCA +
Preference number: 3 (lower is better)
Translates to: PRAPRIVLSTGQ*STKYGPQATRP
Trigger: TGGTCTCGTGGCCTGAGGTCCATATTTTGTGGACCACTGTCCTGTACTGAGCACTATTCTTGGAGCACGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGGCACTGGGGTGGTTTaGGTGAAAACACATGAGGAA +
Preference number: 3 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGGTGVV*VKTHEE
Trigger: TTCCTCATGTGTTTTCACCAAAACCACCCCAGTGCC...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 3 (lower is better)
Translates to: SGFSARTSGLSNSITFPFRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 3 (lower is better)
Translates to: ISRQDLYNLTSAASNIANQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
3UTR-3UTR CAA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 3 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: QNLASLQGLQACQTQSPSSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 3 (lower is better)
Translates to: AENADIHLINKDCATGWLSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 72 bp TTTGGTGACGCCAAACACCAGCATGAACACCATGCTTaGAGTGTACACCCACTGGTACACATGCTGACCGAT +
Preference number: 3 (lower is better)
Translates to: FGDAKHQHEHHA*SVHPLVHMLTD
Trigger: ATCGGTCAGCATGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGTCACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: SSSRISRQDLYNLTSAASDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 3 (lower is better)
Translates to: SGFSARTSGLSNSITFPFGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCCTTTCCCCTTGTGCCTaGATATCAGATCTGGAGCCC +
Preference number: 3 (lower is better)
Translates to: SRRMIFELRRRARATQSSLSPCA*ISDLEP
Trigger: GGGCTCCAGATCTGATATCAAGGCACAAGGGGAAAG...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 72 bp CTGTGTTTCAGCGAGTTCATTAGATGCTGTCATTCATaGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTG +
Preference number: 3 (lower is better)
Translates to: LCFSEFIRCCHS*LPQVFPECFQV
Trigger: CACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCATCTAATGAACTCGCTGAAACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGGGAACCCTTGGGGATTaGGGAGGTGAAGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWGTLGD*GGEGQF
Trigger: AAACTGCCCTTCACCTCCCAAATCCCCAAGGGTTCC...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 3 (lower is better)
Translates to: FQAENADIHLINKDCATGGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 3 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 3 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 3 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR TCA 72 bp AAACAGCATCTTCCTCTCTCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTGCATTGTAAAGGTGTT +
Preference number: 3 (lower is better)
Translates to: KQHLPLSQQGSP*RLPPLLHCKGV
Trigger: AACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGATGCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR TCA 72 bp CCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACATCGCAAATGCAGAAT +
Preference number: 3 (lower is better)
Translates to: PPLESAARTSTI*LLLLVTSQMQN
Trigger: ATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
3UTR GCA 72 bp GATCTTATCAAACACCGTGTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGTGAAGACGAAGCCTTT +
Preference number: 3 (lower is better)
Translates to: DLIKHRVMQRGG*HQCGLGEDEAF
Trigger: AAAGGCTTCGTCTTCACCAAGACCACACTGATGGCATCCTCCTCTCTGCATGACACGGTGTTTGATAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR GCA 72 bp TGTGCCTTGATATCAGATCTGGAGCCCCACAGAAGCTaGAGCCCTACTGTTCTTGTGCTTGAAATAGCTTCT +
Preference number: 3 (lower is better)
Translates to: CALISDLEPHRS*SPTVLVLEIAS
Trigger: AGAAGCTATTTCAAGCACAAGAACAGTAGGGCTGCAGCTTCTGTGGGGCTCCAGATCTGATATCAAGGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CCA 72 bp GTTAGGGTTCAAGCCCTATCTCTGTCCCTTCCTTCCTaGGCATCTGTAGATAAGTTACTAACCTCAGTGAGC +
Preference number: 3 (lower is better)
Translates to: VRVQALSLSLPS*ASVDKLLTSVS
Trigger: GCTCACTGAGGTTAGTAACTTATCTACAGATGCCCAGGAAGGAAGGGACAGAGATAGGGCTTGAACCCTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGGAACCCTTGGGGATTaGGGAGGTGAAGGGCAGTTT +
Preference number: 3 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPGTLGD*GGEGQF
Trigger: AAACTGCCCTTCACCTCCCAAATCCCCAAGGGTTCC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 3 (lower is better)
Translates to: SRRMIFELRRRARATQSSDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 3 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR GCA 72 bp ATTGGGCTCTTTAAGATCTTATCAAACACCGTGTCATaGAGAGAGGAGGATGCCATCAGTGTGGTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: IGLFKILSNTVS*REEDAISVVLV
Trigger: CACCAAGACCACACTGATGGCATCCTCCTCTCTGCATGACACGGTGTTTGATAAGATCTTAAAGAGCCCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAAGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 3 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR-3UTR CAA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAATCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 3 (lower is better)
Translates to: VTSQMQNLASLQGLQACQSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
3UTR-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTAAACTGCCTTTCCCCTaGTGCCTTGATATCAGATCT +
Preference number: 3 (lower is better)
Translates to: SGFSARTSGLSNSITFPFKLPFP*CLDIRS
Trigger: AGATCTGATATCAAGGCACAAGGGGAAAGGCAGTTT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR TCA 72 bp GCCCCACAGAAGCTGCAGCCCTACTGTTCTTGTGCTTaGAATAGCTTCTGTTCACTTAGGTGTGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: APQKLQPYCSCA*NSFCSLRCGNK
Trigger: TTTATTTCCACACCTAAGTGAACAGAAGCTATTTCAAGCACAAGAACAGTAGGGCTGCAGCTTCTGTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 3 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
3UTR TCA 72 bp GTGTCATTACCACTTGTCACCCAGTCAAGATGGAAGTaGGTGGGGTTAAACGAGAAGAAAATTCTGCTCTTT +
Preference number: 3 (lower is better)
Translates to: VSLPLVTQSRWK*VGLNEKKILLF
Trigger: AAAGAGCAGAATTTTCTTCTCGTTTAACCCCACTCACTTCCATCTTGACTGGGTGACAAGTGGTAATGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
3UTR CCA 72 bp TTTATTTTATTGTGCAAACTGGGACACTTTTCAGAGTaGCCATTGTTAAACCTGATGGGATACTGGGACACA +
Preference number: 3 (lower is better)
Translates to: FILLCKLGHFSE*PLLNLMGYWDT
Trigger: TGTGTCCCAGTATCCCATCAGGTTTAACAATGGCCACTCTGAAAAGTGTCCCAGTTTGCACAATAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR CAA 72 bp TCTGCCAGCACCGCGCCGACCTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SASTAPTSHMVL*PWGPQVIREPL
Trigger: CAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCGCGGTGCTGGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGTGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGCHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGLHRGG*SGPSGG
Trigger: GCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAG...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTCCAGATGCCAAACACTaGAGGCCAGGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTPDAKH*RPGLPG
Trigger: GCCAGGGAGGCCTGGCCTCCAGTGTTTGGCATCTGG...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCAGAGGTGAGGATGTCTaGTTGGGATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACRGEDV*LGSGSL
Trigger: GAGGCTGCCTGATCCCAATCAGACATCCTCACCTCT...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR TCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CACACATGGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCATGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: HTWSCCPGAHRSSVSPCPCHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...TGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGTPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACGGAGCCCTGGGCTTTTaGCCTGGGGACACTTTCACT +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDGALGF*PGDTFT
Trigger: AGTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCC...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTAGAGGTGAGGATGTCTaGTTGGGATCAGGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRARGEDV*LGSGSL
Trigger: GAGGCTGCCTGATCCCAATCAGACATCCTCACCTCT...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR TCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCTGGAGGATTTGGTaGATGAGAATCACCGGCCCT +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAACWRIW*MRITGP
Trigger: AGGGCCGGTGATTCTCATTCACCAAATCCTCCAGCA...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAACCAGAGACCCAGCCTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: CPGAHRSSVSPCPTRDPACAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...GGCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGRKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAARKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVEAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGTGGGGTGACATGGACTaGGTATGGCAGTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGWGDMD*VWQWGQ
Trigger: TTGTCCCCACTGCCATACTCAGTCCATGTCACCCCA...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPLHRGG*SGPSGG
Trigger: GCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAG...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCAGAAAGTTCTCTaGGTGAAACGGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCLQKVL*VKRQPH
Trigger: GTGAGGCTGCCGTTTCACGCAGAGAACTTTCTGCAG...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCCTGGGCTTTTGGCCTaGGGACACTTTCACTCTATG +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCPGLLA*GHFHSM
Trigger: CATAGAGTGAAAGTGTCCCCAGGCCAAAAGCCCAGG...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRACTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
3UTR CAA 72 bp CGTGAGCCCTTGTCCAACCAGAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCAATCATCAGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: REPLSNQRPSHQ*LKAALPIIRRK
Trigger: CTTCCTCCTGATGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCTCTGGTTGGACAAGGGCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTRKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVEATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAAVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCTGGGGTGACATGGACTaGGTATGGCAGTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPWGDMD*VWQWGQ
Trigger: TTGTCCCCACTGCCATACTCAGTCCATGTCACCCCA...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGTPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGGTCTGGATGAGCTGGTaGTCAGGAACTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGVWMSW*SGTFVS
Trigger: AGACACAAAAGTTCCTGAGCACCAGCTCATCCAGAC...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR GCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGCATGAACACCATGCTTaGAGTGTACACCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGHEHHA*SVHPLV
Trigger: TACCAGTGGGTGTACACTGCAAGCATGGTGTTCATG...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCTGCAGAAAGTTCTCTaGGTGAAACGGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRALQKVL*VKRQPH
Trigger: GTGAGGCTGCCGTTTCACGCAGAGAACTTTCTGCAG...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCTCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRSARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRARLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHTLISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGT...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDCAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCACCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRVGEPG*PADILH
Trigger: GTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCAC...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPVGEPG*PADILH
Trigger: GTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCAC...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCTGGGGTGGTTTTGGTaGAAACACATGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRALGWFW*KHMRNP
Trigger: AGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAG...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACTKLML*RTDLRL
Trigger: CAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGT...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFLHRGG*SGPSGG
Trigger: GCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAG...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGCTGAAGACCAGGGCTaGCTGCGGAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHAEDQG*LRRGQP
Trigger: GGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGCTGAAGACCAGGGCTaGCTGCGGAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLAEDQG*LRRGQP
Trigger: GGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTCCATTAGCTGGGTCTaGCCCGGTTCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFSISWV*PGSPPR
Trigger: TCTGGGTGGTGAACCGGGGCAGACCCAGCTAATGGA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPRLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGCCAAGGACGAGAGGATaGATGCGGAGCAGGTTTTCT +
Preference number: 4 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVEPRTRG*MRSRFS
Trigger: AGAAAACCTGCTCCGCATCCATCCTCTCGTCCTTGG...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCTCCACGTTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFSTFRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAACGTGGA...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCACACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFTLISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGT...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR TCA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCGAATATGACATACACTaGTATCCCGATGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACEYDIH*YPDESC
Trigger: ACAGCTCTCATCGGGATATCAGTGTATGTCATATTC...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR TCA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRARQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAARTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCAGTCAAGATGGAAGTaGGTGGGGTTAAACGAGAAG +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGQSRWK*VGLNEK
Trigger: CTTCTCGTTTAACCCCACTCACTTCCATCTTGACTG...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFGVISF*KGSPPA
Trigger: GGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSALHRGG*SGPSGG
Trigger: GCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAG...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPNGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCTGCAGAAAGTTCTCTaGGTGAAACGGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGLQKVL*VKRQPH
Trigger: GTGAGGCTGCCGTTTCACGCAGAGAACTTTCTGCAG...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTGTTCTCTCCAGAACCTaGCAGAGCATCTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGVLSRT*QSISSV
Trigger: CACCGATGAGATGCTCTGGCAGGTTCTGGAGAGAAC...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR GCA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGGCTGAAGACCAGGGCTaGCTGCGGAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQAEDQG*LRRGQP
Trigger: GGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGC...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTTCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSASARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGAGCCTACAGCAAGGCTaGCCACGACTAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTESLQQG*PRLKGQ
Trigger: CTGTCCTTTTAGTCGTGGCCAGCCTTGCTGTAGGCT...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRATFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CACACATGGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 4 (lower is better)
Translates to: HTWSCCPGAHRSSVSPCPSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...TGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCCAAGGGGAAAGGACTaGAGGGGCTTTGTTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAPRGKD*RGFVVK
Trigger: CTTCACAACAAAGCCCCTCCAGTCCTTTCCCCTTGG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCCCTTAATGCTACGCTaGGGCTTTCTTATTAGTAGG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAPLMLR*GFLISR
Trigger: CCTACTAATAAGAAAGCCTCAGCGTAGCATTAAGGG...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACCCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGAAATGCGTAACAGAATaGAGAAGCCTACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGKCVTE*RSLQQG
Trigger: GCCTTGCTGTAGGCTTCTTCATTCTGTTACGCATTT...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TGCTGTCATTCATGGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTGCCAGGCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: CCHSWLPQVFPECFQVPGPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...GCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGTGTCTTAAGGGCTCCTaGGTCCCAGATGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTECLKGS*VPDAKH
Trigger: GTGTTTGGCATCTGGGACTCAGGAGCCCTTAAGACA...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp CACACATGGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HTWSCCPGAHRSSVSPCPTKLML*RTDLRL
Trigger: CAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGT...TGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTETPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGAGACCCAGCCACCAGTTGCTGAAGGCAGCGCTGCCAATCATCAGGAGGAAGCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QRPSHQLLKAALPIIRRKQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...CTTCCTCCTGATGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGLHRGG*SGPSGG
Trigger: GCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGGCCCTGCATGGAGGAGGTGATGTGGGTGAACCAGGGTGACCGGCTGACATTCGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RPCMEEVMWVNQGDRLTFVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...GAATGTCAGCCGGTCACCCTGGTTCACCCACATCACCTCCTCCATGCAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRANGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATAAGACCAGGGCTGCCTaGGGAGAGGACAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANKTRAA*GEDSPS
Trigger: GGAGGGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTT...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR GCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TGCTGTCATTCATGGCTGCCACAAGTGTTTCCCGAGTGCTTCCAGGTGCCAGGCAAGGGCCCACAACTCTaGAATGGAGCAGAGACCACT +
Preference number: 4 (lower is better)
Translates to: CCHSWLPQVFPECFQVPGKGPQL*NGAETT
Trigger: AGTGGTCTCTGCTCCATTGCAGAGTTGTGGGCCCTT...GCCTGGCACCTGGAAGCACTCGGGAAACACTTGTGGCAGCCATGAATGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACATCCTGATGGCAGCCTaGAGCCCTGGGCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHILMAA*SPGLLA
Trigger: GGCCAAAAGCCCAGGGCTCCAGGCTGCCATCAGGAT...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGTTGGCCATAAACATCTaGACGGGTATGAATATGACA +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGLAINI*TGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAA...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACAAACAGGGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARASHRCDSQRDPSCTNRARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...CCTGTTTGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR CCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACACGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTCGCCGACCTCACACATaGTCCTGTTGCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPRRPHT*SCCPGA
Trigger: GGCCCCAGGGCAACAGGACCATGTGTGAGGTCGGCG...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCCCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATTCCTCCACGTTCCGTaGATGGGAGGGGCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRFLHVP*MGGAED
Trigger: GTCTTCAGCCCCTCCCATCCACGGAACGTGGAGGAA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 72 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCGCACACACACTTGGAG +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFG*RLCSRSHTHLE
Trigger: CTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCTCAGTTCCTTTGCTTTaGCCCCTGAGAACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPSVPLL*PLRTVF
Trigger: GAAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGA...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR TCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTCCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSARKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVCHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCACCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTGCCCACCAAGTGGGGTaGCATGGACTGAGTATGGCA +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASAHQVG*HGLSMA
Trigger: TGCCATACTCAGTCCATGTCACCCCACTTGGTGGGC...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGCCCTGCATGGAGGAGGTGATGTGGGTGAACCAGGGTGACCGGCTGACATTCTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: RPCMEEVMWVNQGDRLTFFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...GAATGTCAGCCGGTCACCCTGGTTCACCCACATCACCTCCTCCATGCAGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCTCTCTCAGCAGGGCTCTCCTTGAAGGCTTCCACCATTGCTGCATTGTAAAGCTCCCTGGCCAGGTTTaGGTAATCAGCGCGCATAGG +
Preference number: 4 (lower is better)
Translates to: LSLSRALLEGFHHCCIVKLPGQV*VISAHR
Trigger: CCTATGCGCGCTGATTACTCAAACCTGGCCAGGGAG...CTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSGVISF*KGSPPA
Trigger: GGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCC...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTEGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGTGAGGATGTCTGATTaGGATCAGGCAGCCTCTACT +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFVRMSD*DQAAST
Trigger: AGTAGAGGCTGCCTGATCCCAATCAGACATCCTCAC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR CCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTENFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHSARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTTTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRALGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCAGTCTGGATGAGCTaGTGCTCAGGAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRASVWMS*CSGTFV
Trigger: CACAAAAGTTCCTGAGCACCAGCTCATCCAGACTGA...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CCA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCTCCTGGACTCCTCTGTaGAAAATGCGTAACAGAATG +
Preference number: 4 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPSWTPL*KMRNRM
Trigger: CATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGA...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSADCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTAGCTCACTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVSSLRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCT...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTGGCTCCTCCCAAGGCTaGATGCAGAAACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAAGSSQG*MQKQGP
Trigger: TGGTCCCTGTTTCTGCATCCAGCCTTGGGAGGAGCC...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp GCCAGGCACTCCTTCCTCCACGTTCCGTGGATGGGAGGGGCTGAAGACCAGGGCACTGATAAAAATTCTTaGCAGAGAAAGAGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: ARHSFLHVPWMGGAEDQGTDKNS*QRKRES
Trigger: ACTCTCCCTCTTTCTCTGCCAAGAATTTTTATCAGT...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAACGTGGAGGAAGGAGTGCCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTTCAGAAAGACACACCTaGGCCTCTCAGCAGCCCCGA +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAASERHT*ASQQPR
Trigger: TCGGGGCTGCTGAGAGGCCCAGGTGTGTCTTTCTGA...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCAAGGTTATTGAGAGGTaGGGATGTCTGATTGGGATC +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAKVIER*GCLIGI
Trigger: GATCCCAATCAGACATCCTCACCTCTCAATAACCTT...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR TCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFCAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHSLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGACGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRRQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTAGAAAGTTCTCTGCGTaGAACGGCAGCCTCACATCC +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSRKFSA*NGSLTS
Trigger: GGATGTGAGGCTGCCGTTTCACGCAGAGAACTTTCT...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLVGEPG*PADILH
Trigger: GTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCAC...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGATGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRCHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTTGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSICHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGTTATTGTGTCTCTCATaGATGTTCTCTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGLLCLS*MFSPEP
Trigger: AGGTTCTGGAGAGAACATTCATGAGAGACACAATAA...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR GCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGTGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTTCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGCTCCTGAGTCCCAGATaGCAAACACTGGAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSLLSPR*QTLEAR
Trigger: CCTGGCCTCCAGTGTTTGGCATCTGGGACTCAGGAG...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCATCCTGATGGCAGCCTaGAGCCCTGGGCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGILMAA*SPGLLA
Trigger: GGCCAAAAGCCCAGGGCTCCAGGCTGCCATCAGGAT...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSILRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CCA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKSARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGRLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTCAGTCTGGATGAGCTaGTGCTCAGGAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFSVWMS*CSGTFV
Trigger: CACAAAAGTTCCTGAGCACCAGCTCATCCAGACTGA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGCCAGCCATGCCCTGGGGACATCACAAAGTTCTTGGTCAGTCTGATTTCACTCGTGGTCCACAAAATATaGACCTCAGGCCACGAGACC +
Preference number: 4 (lower is better)
Translates to: GQPCPGDITKFLVSLISLVVHKI*TSGHET
Trigger: GGTCTCGTGGCCTGAGGTCCATATTTTGTGGACCAC...GAGTGAAATCAGACTGACCAAGAACTTTGTGATGTCCCCAGGGCATGGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 72 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCCGTTCGCACACACACT +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVN*ACVSVPVRTHT
Trigger: AGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCTGGCCGTGCGGTAGTTaGTGGCCCAGGCAAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLWPCGS*WPRQGP
Trigger: GGGCCCTTGCCTGGGCCATCAACTACCGCACGGCCA...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGCACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGACACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRTLISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGT...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTENSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCCAGCCACCAGTTGCTaGAGGCAGCGCTGCCAATCA +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLPATSC*RQRCQS
Trigger: TGATTGGCAGCGCTGCCTTCAGCAACTGGTGGCTGG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGCGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQRQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQVGEPG*PADILH
Trigger: GTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCAC...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR TCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTGCCCACCAAGTGGGGTaGCATGGACTGAGTATGGCA +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVAHQVG*HGLSMA
Trigger: TGCCATACTCAGTCCATGTCACCCCACTTGGTGGGC...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCTGGGGTGGTTTTGGTaGAAACACATGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGLGWFW*KHMRNP
Trigger: AGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAACTTGTCCCACCCGCCTaGAGTCCTCCTCTCCAACTG +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQLVPPA*SPPLQL
Trigger: CAGTTGGAGAGGAGGACTTCAGGCGGGTGGGACAAG...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASTPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGATGCTGACCGATGTCTaGCAGCACCGCGCCGACCTC +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWMLTDV*QHRADL
Trigger: GAGGTCGGCGCGGTGCTGGCAGACATCGGTCAGCAT...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCCGAGTGCTTCCAGGTaGCAGGCACTCCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLPSASR*QALLPP
Trigger: TGGAGGAAGGAGTGCCTGGCACCTGGAAGCACTCGG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGACCATCACTGTCCTTaGAACAGGCCAAGGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLDHHCP*NRPRGK
Trigger: CTTTCCCCTTGGCCTGTTGCAAGGACAGTGATGGTC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAGGAGCCCTGGGCTTTTaGCCTGGGGACACTTTCACT +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTGALGF*PGDTFT
Trigger: AGTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCC...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTESIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATGCAGCTCTCCTTCTTGCCATAGGCGTGAATGATGCCCAGGCCCTGCATGGAGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: DAALLLAIGVNDAQALHGVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...TCCATGCAGGGCCTGGGCATCATTCACGCCTATGGCAAGAAGGAGAGCTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTCAGTCTGGATGAGCTaGTGCTCAGGAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPSVWMS*CSGTFV
Trigger: CACAAAAGTTCCTGAGCACCAGCTCATCCAGACTGA...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGAGCCTACAGCAAGGCTaGCCACGACTAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGSLQQG*PRLKGQ
Trigger: CTGTCCTTTTAGTCGTGGCCAGCCTTGCTGTAGGCT...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGGAGGTGGCATGTGATGACCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACAGATTGTGCCACTGGCTaGCTCCACCAGACGAAACAA +
Preference number: 4 (lower is better)
Translates to: RRWHVMTSCSKNSAQYRTDCATG*LHQTKQ
Trigger: TTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATC...TGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp CAAACCCTCAGAAGTCACTCTCCCCCAGGGATGATACTGATGACCATCACTGTCCAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QTLRSHSPPGMILMTITVQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...GACAGTGATGGTCATCAGTATCATCCCTGGGGGAGAGTGACTTCTGAGGGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATAGCTCACTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHSSLRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCT...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGGAATGCACTTTGCAATaGATAGCTGTATACACGGGG +
Preference number: 4 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEECTLQ*IAVYTG
Trigger: CCCCGTGTATACAGCTATCCATTGCAAAGTGCATTC...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGCAGGCAATGACAGGTaGAACCCTGCCGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFAGNDR*NPAERQ
Trigger: CTGCCTCTCGGCAGGGTTCCACCTGTCATTGCCTGC...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATCACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACACACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENTLISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGT...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAACACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKTLISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGT...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASSLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSASLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAACACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGACTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCGACAGCCCCTCCTCCTaGAGACTCCTCCTATTCATC +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLDSPSS*RLLLFI
Trigger: GATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTC...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCTGGGGTGACATGGACTaGGTATGGCAGTGGGGACAA +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLWGDMD*VWQWGQ
Trigger: TTGTCCCCACTGCCATACTCAGTCCATGTCACCCCA...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGTATCTGCTCAGTGTATaGATGAATACAGAAGCATCT +
Preference number: 4 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVEYLLSV*MNTEAS
Trigger: AGATGCTTCTGTATTCATTCATACACTGAGCAGATA...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGTTTCCCCTTGTGCCTTaGTATCAGATCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQFPLVP*YQIWSP
Trigger: GGGGCTCCAGATCTGATATCAAGGCACAAGGGGAAA...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILGVISF*KGSPPA
Trigger: GGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCC...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTATCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGTTCTCTCCAGAACCTaGCAGAGCATCTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: ARASHRCDSQRDPSCTCNVLSRT*QSISSV
Trigger: CACCGATGAGATGCTCTGGCAGGTTCTGGAGAGAAC...ATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGCTGAAGACCAGGGCTaGCTGCGGAGAGGACAGCCC +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQAEDQG*LRRGQP
Trigger: GGGCTGTCCTCTCCGCAGGCAGCCCTGGTCTTCAGC...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTCCATTAGCTGGGTCTaGCCCGGTTCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHSISWV*PGSPPR
Trigger: TCTGGGTGGTGAACCGGGGCAGACCCAGCTAATGGA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAATCAGAGCCTGGCATCTaGTGCCCAGGACTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKSEPGI*CPGLQG
Trigger: GCCCTGGAGTCCTGGGCAGCAGATGCCAGGCTCTGA...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGGTCCTCCTCTCCAACTaGCCCATTCAACTGCCACTC +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARVLLSN*PIQLPL
Trigger: GAGTGGCAGTTGAATGGGGCAGTTGGAGAGGAGGAC...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTAGCGAGTTCATTAGATaGTGTCATTCATGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASSEFIR*CHSWLP
Trigger: TGGCAGCCATGAATGACAGCATCTAATGAACTCGCT...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCATGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCTCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSSARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAGTGGCTCCCTTGGCTaGTGGACTCCTCTCACTGTA +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTSGSLG*WTPLTV
Trigger: TACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGATGGTCCTGTTGCCCTaGGGCCCACAGGTCATCCGT +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWMVLLP*GPQVIR
Trigger: ACGGATGACCTGTGGGCCCCAGGGCAACAGGACCAT...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGAGCTCACTCCGTGGATaGGAGGGGCTGAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMSSLRG*EGLKTR
Trigger: CCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCT...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCCAAGTGGGGTGACATaGACTGAGTATGGCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIPSGVT*TEYGSG
Trigger: CCCACTGCCATACTCAGTCCATGTCACCCCACTTGG...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGAGGCCAGGCCTCCCTaGCCAGGTTTGAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLEARPP*PGLSNQ
Trigger: CTGATTACTCAAACCTGGCCAGGGAGGCCTGGCCTC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATAGGCCAGCCATGCCCTaGGGACATCACAAAGTTCTT +
Preference number: 4 (lower is better)
Translates to: ARASHRCDSQRDPSCTCNRPAMP*GHHKVL
Trigger: AAGAACTTTGTGATGTCCCCAGGGCATGGCTGGCCT...ATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 72 bp GATGCCATCAGTGTGGTCTTGGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGCATGAACACCATGCTT +
Preference number: 4 (lower is better)
Translates to: DAISVVLVKTKP*VTPNTSMNTML
Trigger: AAGCATGGTGTTCATGCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCACCAAGACCACACTGATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCAGGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HQQGHSEGKDVHEDIHSQGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...CTGAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCCATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACACATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGGTGGGTGAACCAGGGTaGCCGGCTGACATTCTCCAC +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKVGEPG*PADILH
Trigger: GTGGAGAATGTCAGCCGGTCACCCTGGTTCACCCAC...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR TCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR TCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTGTGGATGGGAGGGGCTaGAGACCAGGGCTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTVDGRG*RPGLPA
Trigger: CGCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCAC...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACGCTCCCCAGGGCATGTaGAGTTTTGATGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENAPQGM*SFDDLR
Trigger: CCTCAGATCATCAAAACTTCACATGCCCTGGGGAGC...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLGVISF*KGSPPA
Trigger: GGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCAGACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HQQGHSEGKDVHEDIHSQTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...CTGAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTTTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGATTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATTTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTTPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACCCCTTTCTGCAGCTaGATCTGTCCTAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARTPFCS*ICPRRA
Trigger: AGCTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGT...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ACGCCAAACACCAGCATGAACACCATGCTTGCAGTGTACACCCACTGGTACACAGTCTGGATGAGCTGGTaGTCAGGAACTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: TPNTSMNTMLAVYTHWYTVWMSW*SGTFVS
Trigger: AGACACAAAAGTTCCTGAGCACCAGCTCATCCAGAC...TGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACCATGAACACCATGCTTaGAGTGTACACCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHHEHHA*SVHPLV
Trigger: TACCAGTGGGTGTACACTGCAAGCATGGTGTTCATG...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVNGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKNGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACTGCAGAAAGTTCTCTaGGTGAAACGGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKLQKVL*VKRQPH
Trigger: GTGAGGCTGCCGTTTCACGCAGAGAACTTTCTGCAG...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCTGCAGAAAGTTCTCTaGGTGAAACGGCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLLQKVL*VKRQPH
Trigger: GTGAGGCTGCCGTTTCACGCAGAGAACTTTCTGCAG...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGGAGGTGGCATGTGATGACCTCGTGCTCCAAGAATAGTGCTCAGTACAGGACAAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RRWHVMTSCSKNSAQYRTRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...TGTCCTGTACTGAGCACTATTCTTGGAGCACGAGGTCATCACATGCCACCTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTCAGAGCCTGGCATCTaGTGCCCAGGACTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSSEPGI*CPGLQG
Trigger: GCCCTGGAGTCCTGGGCAGCAGATGCCAGGCTCTGA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR GCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCGAGCCCCACAGAAGCTaGAGCCCTACTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSEPHRS*SPTVLV
Trigger: CACAAGAACAGTAGGGCTGCAGCTTCTGTGGGGCTC...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTGATCCAAGTTGTACCTaGAATGAAGGAGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAADPSCT*NEGEER
Trigger: CCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATC...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTEEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGCACGATGGCTATGGTaGACACGATGGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQARWLW*TRWGPG
Trigger: CCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGC...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSSIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTATCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAAGCCTACAGCAAGGCTaGCCACGACTAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKSLQQG*PRLKGQ
Trigger: CTGTCCTTTTAGTCGTGGCCAGCCTTGCTGTAGGCT...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACCAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACACAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR CAA 72 bp ACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTaGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGG +
Preference number: 4 (lower is better)
Translates to: TCSSNNPDCLPT*YVQVQAVENKG
Trigger: CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTCTTTGCTTTGACCCCTaGGAACTGTTTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASLCFDP*ELFSPM
Trigger: CATTGGTGAAAACAGTTCTCAGGGGTCAAAGCAAAG...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR TCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CCAGTCAAGATGGAAGTGAGTGGGGTTAAACGAGAAGAAAATTCTGCTCTTTTTCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: PVKMEVSGVKREENSALFLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...AAAAAGAGCAGAATTTTCTTCTCGTTTAACCCCACTCACTTCCATCTTGACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCTGTGGGCCCCAGAATaGAAAAGGCGTACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSLWAPE*KRRTPH
Trigger: GTGCGGCGTACGCCTTTTTCATTCTGGGGCCCACAG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCATGCCACGGGTGCGGTaGGTTTGCGTCTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTMPRVR*VCVSGG
Trigger: TCCTCCTGAGACGCAAACTCACCGCACCCGTGGCAT...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAATGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKCAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGCAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGSLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTCACTGGTACACATGCTaGCCGATGTCTGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATHWYTC*PMSAST
Trigger: GGTGCTGGCAGACATCGGTCAGCATGTGTACCAGTG...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWRQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCCGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSRQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCGCCCACCAAGTGGGGTaGCATGGACTGAGTATGGCA +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVAHQVG*HGLSMA
Trigger: TGCCATACTCAGTCCATGTCACCCCACTTGGTGGGC...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGAAGTTTTGATGATCTaGGGCGGCTTGGAAGCATTG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDEVLMI*GGLEAL
Trigger: CAATGCTTCCAAGCCGCCTCAGATCATCAAAACTTC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAAGGAGTCATAGGAGGTaGTTCATCTCTCAATGCATC +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLRSHRR*FISQCI
Trigger: GATGCATTGAGAGATGAATCACCTCCTATGACTCCT...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGCCTAAGCCTGTGCTTTaGGGAATTTGGCTAAATGGC +
Preference number: 4 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQPKPVL*GIWLNG
Trigger: GCCATTTAGCCAAATTCCTCAAAGCACAGGCTTAGG...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATAGCCAATCCTATTCATaGGGTCTCCACCCTCATGAC +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANSQSYS*GLHPHD
Trigger: GTCATGAGGGTGGAGACCTCATGAATAGGATTGGCT...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACACTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTCTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGCCACCACCCCTTTCTaGAGCTGCATCTGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKATTPF*SCICPR
Trigger: CCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACCAAAGTTCCATTGACTaGCACCACCCCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNQSSID*HHPFLQ
Trigger: CTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTG...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGCACACATGGTCCTGTTaGCCTGGGGCCCACAGGTCA +
Preference number: 4 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVHTWSC*PGAHRS
Trigger: TGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATCATGAACACCATGCTTaGAGTGTACACCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHHEHHA*SVHPLV
Trigger: TACCAGTGGGTGTACACTGCAAGCATGGTGTTCATG...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCAGTCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: HQQGHSEGKDVHEDIHSQSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...CTGAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATAACGGTTCATTAGCCTaGCAGTGGGAGTCGTGTCAA +
Preference number: 4 (lower is better)
Translates to: ISRQDLYNLTSAASNIANNGSLA*QWESCQ
Trigger: TTGACACGACTCCCACTGGCAGGCTAATGAACCGTT...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTATGATGCCCAGGCCCTaGATGGAGGAGGTGATGTGG +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATMMPRP*MEEVMW
Trigger: CCACATCACCTCCTCCATGCAGGGCCTGGGCATCAT...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATCTGCCTTTCCCCTTGTaGCTTGATATCAGATCTGGA +
Preference number: 4 (lower is better)
Translates to: ARASHRCDSQRDPSCTCNLPFPL*LDIRSG
Trigger: TCCAGATCTGATATCAAGGCACAAGGGGAAAGGCAG...ATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATGTCTGGATGAGCTGGTaGTCAGGAACGATTATACCA +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHVWMSW*SGTIIP
Trigger: TGGTATAATCGTTCCTGAGCACCAGCTCATCCAGAC...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR GCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTTCGGTGTTCTTCTTCTaGCAGAGTAAACCAAAGCGA +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAASVFFF*QSKPKR
Trigger: TCGCTTTGGTTTACTCTGGCAGAAGAAGAACACCGA...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGGGAGCCCTGGGCTTTTaGCCTGGGGACACTTTCACT +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQGALGF*PGDTFT
Trigger: AGTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCC...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACATCCTGATGGCAGCCTaGAGCCCTGGGCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHILMAA*SPGLLA
Trigger: GGCCAAAAGCCCAGGGCTCCAGGCTGCCATCAGGAT...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGATCCTGATGGCAGCCTaGAGCCCTGGGCTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSILMAA*SPGLLA
Trigger: GGCCAAAAGCCCAGGGCTCCAGGCTGCCATCAGGAT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGCTCCGCCGGCCTCGCTaGTCCAGATCTGAGATAAGG +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSLRRPR*SRSEIR
Trigger: CCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAG...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTATAATGTCAGCACGATaGCTATGGTGGACACGATGG +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVIMSAR*LWWTRW
Trigger: CCATCGTGTCCACCATAGCCATCGTGCTGACATTAT...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQVTLLL*ASGSLG
Trigger: GCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGAC...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCAGTCTGGATGAGCTaGTGCTCAGGAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHSVWMS*CSGTFV
Trigger: CACAAAAGTTCCTGAGCACCAGCTCATCCAGACTGA...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTAGCCTACAGCAAGGCTaGCCACGACTAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFSLQQG*PRLKGQ
Trigger: CTGTCCTTTTAGTCGTGGCCAGCCTTGCTGTAGGCT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAACAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATCCTGGACTCCTCTGTaGAAAATGCTTATCAAACAC +
Preference number: 4 (lower is better)
Translates to: NYGEELGPHKAADVPLLRSWTPL*KMLIKH
Trigger: GTGTTTGATAAGCATTTTCCACAGAGGAGTCCAGGA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR CCA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGGCTGTCCAGAGCCACTaGAATATCTGCTCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQAVQSH*NICSVY
Trigger: ATACACTGAGCAGATATTCCAGTGGCTCTGGACAGC...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp TCCTCCTCTAGAATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTTCAGTCTGGATGAGCTaGTGCTCAGGAACGATTATA +
Preference number: 4 (lower is better)
Translates to: SSSRISRQDLYNLTSAASSVWMS*CSGTII
Trigger: TATAATCGTTCCTGAGCACCAGCTCATCCAGACTGA...ACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGATTCTAGAGGAGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTTGCTTGTCACAGTCCTaGCACACTGCAAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLCLSQS*HTARSQ
Trigger: CTGAGACCTTGCAGTGTGCCAGGACTGTGACAAGCA...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTAGGGGTTTGCTAAGATaGTTTCGTGTCTTATACATG +
Preference number: 4 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASRGLLR*FRVLYM
Trigger: CATGTATAAGACACGAAACCATCTTAGCAAACCCCT...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 72 bp ACAAACAGGACAGGATCCTGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATA +
Preference number: 4 (lower is better)
Translates to: TNRTGSCGITVS*VLRSSKLRMQI
Trigger: TATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSSPSPA*ARKMWR
Trigger: TCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVCAEPI*GCHFAP
Trigger: AGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACA...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAAGGTGTTCAGGATCCTTaGACTGCAATCCTCGCAGGT +
Preference number: 4 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQGVQDP*TAILAG
Trigger: ACCTGCGAGGATTGCAGTTCAAGGATCCTGAACACC...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAACAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTG +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQQQGSP*RLPPLL
Trigger: CAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTG...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGTGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLCVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGGAAGAGGAACACAGTaGAGAGAGAAAGGAGGTACC +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWGRGTQ*REKGGT
Trigger: GGTACCTCCTTTCTCTCTTCACTGTGTTCCTCTTCC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAAATGCGTAACAGAATaGAGAAGCCTACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSKCVTE*RSLQQG
Trigger: GCCTTGCTGTAGGCTTCTTCATTCTGTTACGCATTT...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAACATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACGCAGCTCCACGGAGGTaGATTTGGCTTGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHAAPRR*IWLASL
Trigger: CAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGC...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGGACAGGTCCCCACTTTaGGGGGATGAGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKDRSPL*GDECIQ
Trigger: CTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTC...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGCCACACAAAGCAGCTaGCGTTCCCCTACTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKATQSS*RSPTEK
Trigger: CTTCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTCTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCACAGAGAGAGCTAACTaGGAAACTGCCTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLTERAN*ETAFPL
Trigger: AAGGGGAAAGGCAGTTTCTCAGTTAGCTCTCTCTGT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACGA +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPGIQSG*AGAQER
Trigger: TCGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR GCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQGVISF*KGSPPA
Trigger: GGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCC...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTATTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCTTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGGCTTCCACCATTGCTaGATTGTAAAGGTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNGFHHC*IVKVFR
Trigger: CCTGAACACCTTTACAATGCAGCAATGGTGGAAGCC...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCGGTAATTTCCTTGAGTaGTCCCCAGGGCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSGNFLE*SPGHVK
Trigger: CTTCACATGCCCTGGGGAGCACTCAAGGAAATTACC...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCATTTGTAGGGGAGTGTaGCCAGAAGACCTGCTACGT +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSICRGV*PEDLLR
Trigger: ACGTAGCAGGTCTTCTGGCCACACTCCCCTACAAAT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGCCTGGGCTTTTGGCCTaGGGACACTTTCACTCTATG +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMPGLLA*GHFHSM
Trigger: CATAGAGTGAAAGTGTCCCCAGGCCAAAAGCCCAGG...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGGAGCCCTGGGCTTTTaGCCTGGGGACACTTTCACT +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLGALGF*PGDTFT
Trigger: AGTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMRLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAACGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQRLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTATTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: SLNYGEELGPHKAADVPLLGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRSIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDSIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGTCAGTCTGGATGAGCTaGTGCTCAGGAACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: LTSAASNIANAESGFSARSVWMS*CSGTFV
Trigger: CACAAAAGTTCCTGAGCACCAGCTCATCCAGACTGA...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: PEPVLPTIPTVCPLCMFKARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...CTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGTCCTGGACTCCTCTGTaGAAAATGCGTAACAGAATG +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSSWTPL*KMRNRM
Trigger: CATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGA...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACGTTCGCACACACACTTaGAGCAGTCCGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHVRTHT*SSPLSW
Trigger: CCAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAAC...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGCCTGGGCTTTTGGCCTaGGGACACTTTCACTCTGGG +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSPGLLA*GHFHSG
Trigger: CCCAGAGTGAAAGTGTCCCCAGGCCAAAAGCCCAGG...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAAAGGTTATTGAGAGGTaGGGATGTCTGATTGGGATC +
Preference number: 4 (lower is better)
Translates to: DIHLINKDCATGWLHQTKKVIER*GCLIGI
Trigger: GATCCCAATCAGACATCCTCACCTCTCAATAACCTT...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR TCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGAATATGACATACACTaGTATCCCGATGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGEYDIH*YPDESC
Trigger: ACAGCTCTCATCGGGATATCAGTGTATGTCATATTC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTCGCCAAACACCAGCATaGACACCATGCTTGCAGTGT +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATRQTPA*TPCLQC
Trigger: ACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCG...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAAATGCGTAACAGAATaGAGAAGCCTACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTKCVTE*RSLQQG
Trigger: GCCTTGCTGTAGGCTTCTTCATTCTGTTACGCATTT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTAAATGCGTAACAGAATaGAGAAGCCTACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIKCVTE*RSLQQG
Trigger: GCCTTGCTGTAGGCTTCTTCATTCTGTTACGCATTT...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCCATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAACATTCTCCACCTTCTTaGGCTCCTGGACTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKHSPPS*APGLLC
Trigger: ACAGAGGAGTCCAGGAGCTCAAGAAGGTGGAGAATG...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTTGCCATAGGCGTGAATaGTGCCCAGGCCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTCHRRE*CPGPAW
Trigger: CCATGCAGGGCCTGGGCATCATTCACGCCTATGGCA...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCTTTGGATGAAGTACTaGTGGAGGAGAAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVLWMKY*WRRNSG
Trigger: CCCTGAGTTTCTCCTCCATCAGTACTTCATCCAAAG...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGTCCGCTCAGCTGGATaGTGTATGACAATGACAGGC +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKVRSAG*CMTMTG
Trigger: GCCTGTCATTGTCATACATCATCCAGCTGAGCGGAC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR TCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTTTGGTGAAAACACATaGGGAACCCTTGGGGATTTG +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLFGENT*GTLGDL
Trigger: CAAATCCCCAAGGGTTCCTCATGTGTTTTCACCAAA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCCTGGGGTGGTTTTGGTaGAAACACATGAGGAACCCT +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFLGWFW*KHMRNP
Trigger: AGGGTTCCTCATGTGTTTTCACCAAAACCACCCCAG...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGGTAGCAGAGTGGGTTTaGACTGATAAAAATTCTTGG +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQVAEWV*TDKNSW
Trigger: CCAAGAATTTTTATCAGTTCAAACCCACTCTGCTAC...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp CCTCATGACCTAATTAATCACCTCCTAAAGGCCCTACCTCTATACTGTCACACTAAGTTGTACCTGCAATaGAGGAGAGGAGAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PHDLINHLLKALPLYCHTKLYLQ*RRGEDR
Trigger: CCTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTT...AGTGTGACAGTATAGAGGTAGGGCCTTTAGGAGGTGATTAATTAGGTCATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGACTAAATGCCACGGGTaGGGTGAGTTTGCGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKTKCHG*GEFASQ
Trigger: CTGAGACGCAAACTCACCGCACCCGTGGCATTTAGT...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAATTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGTTGGGGTACTTTTCCTaGTGGCTTCATGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMLGYFS*WLHAPM
Trigger: CATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAA...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGCTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CCAGTCAAGATGGAAGTGAGTGGGGTTAAACGAGAAGAAAATTCTGCTCTTTTTTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: PVKMEVSGVKREENSALFLRLSL*SSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAA...AAAAAGAGCAGAATTTTCTTCTCGTTTAACCCCACTCACTTCCATCTTGACTGG
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLTKLML*RTDLRL
Trigger: CAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGT...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSTKLML*RTDLRL
Trigger: CAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGT...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGTCTGGATGAGCTGGTaGTCAGGAACTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLVWMSW*SGTFVS
Trigger: AGACACAAAAGTTCCTGAGCACCAGCTCATCCAGAC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR GCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR GCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR GCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCATCCATTAGCTGGGTCTaGCCCGGTTCACCACCCAGA +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPSISWV*PGSPPR
Trigger: TCTGGGTGGTGAACCGGGGCAGACCCAGCTAATGGA...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGCGGCTTGGAAGCATTaGAGCTGGAATGGCACTTTG +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATAAWKH*SWNGTL
Trigger: CAAAGTGCCATTCCAGCTGCAATGCTTCCAAGCCGC...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR GCA 90 bp AACTCTAAATACAGTAAATACAGTTACCCTACTTCATCTGGTGCTGTATGGGAGCCTCCCAAGGCTGGATaGAGAAACAGGGACCAGCAG +
Preference number: 4 (lower is better)
Translates to: NSKYSKYSYPTSSGAVWEPPKAG*RNRDQQ
Trigger: CTGCTGGTCCCTGTTTCTGCATCCAGCCTTGGGAGG...CTCCCATACAGCACCAGATGAAGTAGGGTAACTGTATTTACTGTATTTAGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp ATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGACCCTACTTCATCTGGTaGTGTATGGGAGAAATGTTC +
Preference number: 4 (lower is better)
Translates to: IGVTLKGIQVVPAMKERRPYFIW*CMGEMF
Trigger: GAACATTTCTCCCATACAGCACCAGATGAAGTAGGG...TCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCATGTGATGACCTCGTaGTCCAAGAATAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFHVMTS*SKNSAQ
Trigger: CTGAGCACTATTCTTGGAGCACGAGGTCATCACATG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCGTGAGGATGTCTGATTaGGATCAGGCAGCCTCTACT +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFVRMSD*DQAAST
Trigger: AGTAGAGGCTGCCTGATCCCAATCAGACATCCTCAC...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCAT +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSVALGS*SSGWGH
Trigger: ATGACCCCAGCCTGAAGACCATGATCCCAGTGCGAC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCTGCACAGGGTCGCACTaGGATCATGGTCTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLCTGSH*DHGLQA
Trigger: AGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCA...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCATCATCCACCGGGTTaGGTGCTAACCTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSHHPPG*VLTLHR
Trigger: CCTGTGCAAGGTTAGCACCCAACCCGGTGGATGATG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FQAENADIHLINKDCATGNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCATCAGCACGATGGCTATaGTGGACACGATGGGGGCCA +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPSARWL*WTRWGP
Trigger: TGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGA...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQRLRRM*QDNVST
Trigger: CGTGCTGACATTATCCTGCCACATCCTCCTGAGACG...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSSIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAGTATCTGGGTCTTCTaGTTGGGTGATGTAAGATGG +
Preference number: 4 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENSIWVF*LGDVRW
Trigger: CCATCTTACATCACCCAACCAGAAGACCCAGATACT...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCA +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWGYFSC*LHAPMS
Trigger: TGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCC...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGTCACGGTTCCTTCCTaGGGGGATTCAGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQVTVPS*GDSVWM
Trigger: CATCCAGACTGAATCCCCCCAGGAAGGAACCGTGAC...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCGCTCGTCCATATCCTTaGAAAAACGGTTCATTAGCC +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILARPYP*KNGSLA
Trigger: GGCTAATGAACCGTTTTTCCAAGGATATGGACGAGC...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACTCCTGGACTCCTCTGTaGAAAATGCGTAACAGAATG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNSWTPL*KMRNRM
Trigger: CATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGA...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCAATGGAGGAGGTGATGTaGGTGAACCAGGGTGACCGG +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPMEEVM*VNQGDR
Trigger: CCGGTCACCCTGGTTCACCCACATCACCTCCTCCAT...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGGGACACTTTCACTCTaGGCTGAGGATGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLGTLSL*AEDERE
Trigger: CTCCCTCTCATCCTCAGCCCAGAGTGAAAGTGTCCC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGGGACACTTTTCAGAGTaGCCATTGTTAAACCTGATG +
Preference number: 4 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQGHFSE*PLLNLM
Trigger: CATCAGGTTTAACAATGGCCACTCTGAAAAGTGTCC...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCCTCAGTACAGGACAGTaGTCCACAAAATATGGACCT +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLLSTGQ*STKYGP
Trigger: AGGTCCATATTTTGTGGACCACTGTCCTGTACTGAG...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
3UTR CAA 72 bp ATAAACAGGACAGGATCCTGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATA +
Preference number: 4 (lower is better)
Translates to: INRTGSCGITVS*VLRSSKLRMQI
Trigger: TATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532494.5
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSSLVQI*DKVGSF
Trigger: GAAGGACCCTACCTTATCTCAGATCTGGACCAGCGA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGAATATGACATACACTaGTATCCCGATGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSEYDIH*YPDESC
Trigger: ACAGCTCTCATCGGGATATCAGTGTATGTCATATTC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFSLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCGGGATTCAGTCTGGATaGGCTGGTGCTCAGGAACTT +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTGIQSG*AGAQEL
Trigger: AAGTTCCTGAGCACCAGCTCATCCAGACTGAATCCC...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTCAGGGTAATTTCCTACCGCGTTTTAACGACGAATAAAGAAGATATAAAAGTGCCCACAGGTCATCCGTaGGCCCTTGTCCAACCAGAG +
Preference number: 4 (lower is better)
Translates to: FRVISYRVLTTNKEDIKVPTGHP*ALVQPE
Trigger: CTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGG...CACTTTTATATCTTCTTTATTCGTCGTTAAAACGCGGTAGGAAATTACCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTAAATGCGTAACAGAATaGAGAAGCCTACAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFKCVTE*RSLQQG
Trigger: GCCTTGCTGTAGGCTTCTTCATTCTGTTACGCATTT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCAGAGGAGGTGATAGGTaGTGCAGCTCTCCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTRGGDR*CSSPSC
Trigger: GCAAGAAGGAGAGCTGCATCACCTATCACCTCCTCT...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCCCACTTTGAGGGGATaGGTGCATTCAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTPTLRG*VHSGTQ
Trigger: CTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGG...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTTATTGTGTCTCTCATaGATGTTCTCTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHLLCLS*MFSPEP
Trigger: AGGTTCTGGAGAGAACATTCATGAGAGACACAATAA...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR TCA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGAGAAAGAGGGAGAGTGAGCAACCCAAATCTGCCACTCCATGTATCGGCAGCTCTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: RERGRVSNPNLPLHVSAALHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...AGCTGCCGATACATGGAGTGGCAGATTTGGGTTGCTCACTCTCCCTCTTTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGGAGGATTTGGTGAATaGGAACTGTCGGCCCTATGG +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSGGFGE*ELSALW
Trigger: CCATAGGGCCGACAGTTCTCATTCACCAAATCCTCC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCT +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSCWRIW*MRTVGP
Trigger: AGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp AGATTTCCAAGGACGAGAGGATGGATGCGGAGCAGGTTTTCTGTAGCATGTGGATGCTCAGTGTATGAATaGATACAGAAGCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: RFPRTRGWMRSRFSVACGCSVYE*IQKHLA
Trigger: AGCAAGATGCTTCTGTATTCATTCATACACTGAGCA...TCCACATGCTACAGAAAACCTGCTCCGCATCCATCCTCTCGTCCTTGGAAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGATACTGATATCCCGATaGGAGCTGTGGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSILISR*ELWAPE
Trigger: TTCTGGGGCCCACAGCTCTCATCGGGATATCAGTAT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCCCATCTCATGGGGTaGGATGAGGATTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFSHLMG*DEDSVK
Trigger: TTTCACTGAATCCTCATCTCACCCCATGAGATGGGA...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGCTCAGGACCCACCCTTaGTACCTCTTCATCCCAAAG +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSLRTHP*YLFIPK
Trigger: CTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAG...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR GCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACACCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPHRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGGTG...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCTTCCTGCTGGCTTCATaGTCCCATGTCAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTFLLAS*SHVKVA
Trigger: TGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAA...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATTGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVTKLML*RTDLRL
Trigger: CAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGT...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKMQRGG*HQCGLG
Trigger: ACCAAGACCACACTGATGGCATCCTCCTCTCTGCAT...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGTCAAACACCGTGTCATaGAGAGAGGAGGATGCCATC +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQSNTVS*REEDAI
Trigger: GATGGCATCCTCCTCTCTGCATGACACGGTGTTTGA...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTGTCGGCCCTATGGCTaGCATGATGATGCACAGGAT +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSCRPYG*HDDAQD
Trigger: ATCCTGTGCATCATCATGGCAGCCATAGGGCCGACA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAACCTATGGTGTGGTTTTaGTTGGGAGCCGGTCCAATG +
Preference number: 4 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQPMVWF*LGAGPM
Trigger: CATTGGACCGGCTCCCAACCAAAACCACACCATAGG...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCGAAAACCCTATGGTGTaGTTTTGGTTGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVENPMV*FWLGAG
Trigger: ACCGGCTCCCAACCAAAACCACACCATAGGGTTTTC...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGGAGCAGAAAACCCTATaGTGTGGTTTTGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWEQKTL*CGFGWE
Trigger: CTCCCAACCAAAACCACACCATAGGGTTTTCTGCTC...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGTCATATGTCGACAATaGGGGCAGGGTGTCTACGGT +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSVICRQ*GQGVYG
Trigger: ACCGTAGACACCCTGCCCCCATTGTCGACATATGAC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCAACACGCGTGTCCTCTaGAATTTCCACACCACGTGG +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSNTRVL*NFHTTW
Trigger: CCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTT...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000497206.6
ENST00000529084.5
CDS-3UTR CCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGATCGGGATGGTGGCTaGCAAAGGACAAAACAAGGC +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLDRDGG*QRTKQG
Trigger: GCCTTGTTTTGTCCTTTGCCAGCCACCATCCCGATC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATTTGGCCATAAACATCTaGACGGGTATGAATATGACA +
Preference number: 4 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHLAINI*TGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAA...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPLGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCTTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: QNLASLQGLQACQTQSPSLGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...GGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTGGCTCCCTTGGCTGGTaGACTCCTCTCACTGTATGC +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTGSLGW*TPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCC...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGTCCTGGACTCCTCTGTaGAAAATGCGTAACAGAATG +
Preference number: 4 (lower is better)
Translates to: QAENADIHLINKDCATGWSWTPL*KMRNRM
Trigger: CATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGA...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCACCTTCTTGAGCTCCTaGACTCCTCTGTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFTFLSS*TPLWKM
Trigger: CATTTTCCACAGAGGAGTCCAGGAGCTCAAGAAGGT...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGGAAGCATTGCAGCTaGAATGGCACTTTGCTAAAT +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGWKHCS*NGTLLN
Trigger: ATTTAGCAAAGTGCCATTCCAGCTGCAATGCTTCCA...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGAATGGTAAGGGACCCTaGCAGCAAGATGTCATCAGC +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQNGKGP*QQDVIS
Trigger: GCTGATGACATCTTGCTGCCAGGGTCCCTTACCATT...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCCTGTCCCTTCCTTCCTaGGCATCTGTAGATAAGTTA +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSLSLPS*ASVDKL
Trigger: TAACTTATCTACAGATGCCCAGGAAGGAAGGGACAG...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp ATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: IHSQRKPPESTVKVEEVTRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...AGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTCTCTCACATTTCCATaGAAGATCCATGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: FQAENADIHLINKDCATGSLTFP*KIHACC
Trigger: ACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGA...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTTATTGTGTCTCTCATaGATGTTCTCTCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSLLCLS*MFSPEP
Trigger: AGGTTCTGGAGAGAACATTCATGAGAGACACAATAA...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529504.5
ENST00000649885.1
CDS-3UTR TCA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTCTCATGGGGTGAGATaGGGATTCAGTGAAATAATT +
Preference number: 4 (lower is better)
Translates to: SRRMIFELRRRARATQSSSHGVR*GFSEII
Trigger: AATTATTTCACTGAATCCTCATCTCACCCCATGAGA...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp AACTCTAAATACAGTAAATACAGTTACCCTACTTCATCTGGTGCTGTATGGGAGACATGGAGGAAGGGGTaGACAAGCTTCCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: NSKYSKYSYPTSSGAVWETWRKG*TSFPKS
Trigger: AGACTTGGGGAAGCTTGTTCACCCCTTCCTCCATGT...CTCCCATACAGCACCAGATGAAGTAGGGTAACTGTATTTACTGTATTTAGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCTATGCACAGTCCAATaGCAACCCAGACTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSLCTVQ*QPRLSQ
Trigger: CTGGGAAAGTCTGGGTTGGCATTGGACTGTGCATAG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR GCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTGGCAAAAAGGGCTATaGACAGTCCAATGCCAACCC +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSWQKGL*TVQCQP
Trigger: GGGTTGGCATTGGACTGTGCATAGCCCTTTTTGCCA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR GCA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GATGGTCAGCACAGTGCAGCCCTTGAAGGCATCTTTGATGGTGTTCTGAACCAGTGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: DGQHSAALEGIFDGVLNQCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...CTGGTTCAGAACACCATCAAAGATGCCTTCAAGGGCTGCACTGTGCTGACCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTCTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCCTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGTTGTGAATCAGTTTTaGATAGCGCCCTCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: VFQAENADIHLINKDCATVVNQF*IAPSLL
Trigger: GAGGAGAGAGGGCGCTATGCAAAACTGATTCACAAC...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGTCTGGATGAGCTGGTaGTCAGGAACTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKVWMSW*SGTFVS
Trigger: AGACACAAAAGTTCCTGAGCACCAGCTCATCCAGAC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR GCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACATGAACACCATGCTTaGAGTGTACACCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPHEHHA*SVHPLV
Trigger: TACCAGTGGGTGTACACTGCAAGCATGGTGTTCATG...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAAGAATCTGGCTTCTCTaGAAGGACTTCAGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPRIWLL*KDFRLV
Trigger: GACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCT...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCGTGTCTTATACATaGAAACAGCCAAACCCTCAG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHFVSYT*KQPNPQ
Trigger: CTGAGGGTTTGGCTGTTTGCATGTATAAGACACGAA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CCA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QSFTLQICVITTCHPVKMSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTREIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGAATTTCCACACCACGTaGCTCAGAGAGGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSNFHTT*LREAFS
Trigger: TGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGCCATTAGGATCGGGATaGTGGCTGGCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSPLGSG*WLAKDK
Trigger: TTTGTCCTTTGCCAGCCACCATCCCGATCCTAATGG...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCTTGGCCATAAACATCTaGACGGGTATGAATATGACA +
Preference number: 4 (lower is better)
Translates to: VTNKATVKVRMFMRTSILLAINI*TGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAA...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp GCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCTTGGCCATAAACATCTaGACGGGTATGAATATGACA +
Preference number: 4 (lower is better)
Translates to: AENADIHLINKDCATGWLLAINI*TGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAA...GAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHLGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCTCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGTCATTAGCCTGCCAGTaGGAGTCGTGTCAAAGAAAC +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQSLACQ*ESCQRN
Trigger: GTTTCTTTGACACGACTCCCACTGGCAGGCTAATGA...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCCAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FLAKHCIQSFTLQICVITQDRIL*DHSQLG
Trigger: ACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTG...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTTCAATCTCAGGCACTaGGGTGGTTTTGGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: LYNLTSAASNIANAESGFFNLRH*GGFGEN
Trigger: GTTTTCACCAAAACCACCCCAGTGCCTGAGATTGAA...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAAGTAGAGGAGGTGACTaGAGTTTTCGTCGTTTAGCG +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKSRGGD*SFRRLA
Trigger: CGCTAAACGACGAAAACTCCAGTCACCTCCTCTACT...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
3UTR CAA 72 bp TTATTGTGCAAACTGGGACACTTTTCAGAGTGGCCATaGTTAAACCTGATGGGATACTGGGACACAGGCATA +
Preference number: 4 (lower is better)
Translates to: LLCKLGHFSEWP*LNLMGYWDTGI
Trigger: TATGCCTGTGTCCCAGTATCCCATCAGGTTTAACAATGGCCACTCTGAAAAGTGTCCCAGTTTGCACAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGGCATTGGTGTCAGATaGGTCATATGTCGACAATGG +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLGIGVR*VICRQW
Trigger: CCATTGTCGACATATGACTCATCTGACACCAATGCC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGGAATATGACATACACTaGTATCCCGATGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWEYDIH*YPDESC
Trigger: ACAGCTCTCATCGGGATATCAGTGTATGTCATATTC...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTLQPLL*WRRARL
Trigger: CAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAG...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCATGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSCVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGAAGGAGAATGATCTTTaGATTACGGAGAAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: SLSRYKSVSLPLVTQSRWKENDL*ITEKSS
Trigger: CGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTT...CCATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGTGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACCATGAACACCATGCTTaGAGTGTACACCCACTGGTA +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHHEHHA*SVHPLV
Trigger: TACCAGTGGGTGTACACTGCAAGCATGGTGTTCATG...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTGTTCTCTCCAGAACCTaGCAGAGCATCTCATCGGTG +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTVLSRT*QSISSV
Trigger: CACCGATGAGATGCTCTGGCAGGTTCTGGAGAGAAC...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCATTTGTAGGGGAGTGTaGCCAGAAGACCTGCTACGT +
Preference number: 4 (lower is better)
Translates to: FLAKHCIQSFTLQICVITICRGV*PEDLLR
Trigger: ACGTAGCAGGTCTTCTGGCCACACTCCCCTACAAAT...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTATCTATGGCAGAGAAATaGCAAAGGTTATTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVSMAEK*QRLLRG
Trigger: ACCTCTCAATAACCTTTGCCATTTCTCTGCCATAGA...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CCA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTTTCAAAAACCAAGGTaGAGAGCGCCACCTTCAACC +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSFQKPR*RAPPST
Trigger: GGTTGAAGGTGGCGCTCTCCACCTTGGTTTTTGAAA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTCGCCAACAGAGATGTaGGTCAATGTCTTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSSPTEM*VNVLKD
Trigger: GTCCTTCAAGACATTGACCCACATCTCTGTTGGCGA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTTAGGATCGGGATGGTaGCTGGCAAAGGACAAAACA +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSLGSGW*LAKDKT
Trigger: TGTTTTGTCCTTTGCCAGCCACCATCCCGATCCTAA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGCAAGACAGTATCTaGGTCTTCTGGTTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVKQDSI*VFWLGD
Trigger: ATCACCCAACCAGAAGACCCAGATACTGTCTTGCTT...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGGTTCTGCAATTTCTTTaGGGTACTTTTCCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKVLQFL*GTFPAG
Trigger: GCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAAC...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTAGCCTACAGCAAGGCTaGCCACGACTAAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTSLQQG*PRLKGQ
Trigger: CTGTCCTTTTAGTCGTGGCCAGCCTTGCTGTAGGCT...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACCGCAAATGCAGAATCTaGCTTCTCTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHRKCRI*LLCKDF
Trigger: GAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCG...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTCAGTTCCTTTGCTTTaGCCCCTGAGAACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHSVPLL*PLRTVF
Trigger: GAAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGA...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGAATATGACATACACTaGTATCCCGATGAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPEYDIH*YPDESC
Trigger: ACAGCTCTCATCGGGATATCAGTGTATGTCATATTC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSNSFIV*TRLSVT
Trigger: GGTGACAGACAAGCGAGTTCAGACAATGAATGAGTT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: SGFSARTSGLSNSITFPFCVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR TCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGCCTTAATGTACGTGTaGTATGTTTTCCAGGTCACG +
Preference number: 4 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVALMYV*YVFQVT
Trigger: CGTGACCTGGAAAACATATCACACGTACATTAAGGC...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCCTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SSRRMIFELRRRARATQSLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR TCA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTACTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR TCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACAGGACCTCTACAATCTaGCTTCTGCTGCTAGTAACA +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHRTSTI*LLLLVT
Trigger: TGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCT...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGCTCCCCAATCTTTGGTaGTCATACTTTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKLPNLW*SYFSPK
Trigger: CTTTGGAGAAAAGTATGATCACCAAAGATTGGGGAG...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR TCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAAGTTCTTGGTCAGTCTaGTTTCACTCTCCAAAAATA +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQSSWSV*FHSPKI
Trigger: TATTTTTGGAGAGTGAAATCAGACTGACCAAGAACT...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR TCA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTTACTGTTCTTGTGCTTaGAATAGCTTCTGTTCACTT +
Preference number: 4 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLYCSCA*NSFCSL
Trigger: AAGTGAACAGAAGCTATTTCAAGCACAAGAACAGTA...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR GCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGCCTTTTCTGGTTCTaGAATTTCTTTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: FQAENADIHLINKDCATGCLFWF*NFFGVL
Trigger: AAGTACCCCAAAGAAATTGCAGAACCAGAAAAGGCA...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCGAAGGCTTCCACCATTaGTGCATTGTAAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTEGFHH*CIVKVF
Trigger: GAACACCTTTACAATGCAGCAATGGTGGAAGCCTTC...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCAGTCTGGATGAGCTGGTaGTCAGGAACTTTTGTGTCT +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPVWMSW*SGTFVS
Trigger: AGACACAAAAGTTCCTGAGCACCAGCTCATCCAGAC...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCTTTCTCATGTTGGGTTaGCCAAGAGCAGAAAACCCT +
Preference number: 4 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTFLMLG*PRAENP
Trigger: AGGGTTTTCTGCTCTTGGCCAACCCAACATGAGAAA...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSSWSSG*GHIFLQ
Trigger: TTGCAGAAAGATATGACCCCAGCCTGAAGACCATGA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: NLASLQGLQACQTQSPSHEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CIQSFTLQICVITTCHPVAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGTTGGGTGATGTAAGATaGGGGGCTTTTATCTATGAG +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKLGDVR*GAFIYE
Trigger: CTCATAGATAAAAGCCCCCCATCTTACATCACCCAA...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGA +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHAPMSR*HLLKAR
Trigger: TCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGC...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCAAGCAGTCCGCTCAGCTaGATGATGTATGACAATGAC +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPSSPLS*MMYDND
Trigger: GTCATTGTCATACATCATCCAGCTGAGCGGACTGCT...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTGTGGGTCAATGTCTTaGAGGACACTAGGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSCGSMS*RTLGFQ
Trigger: TTGAAAACCTAGTGTCCTTCAAGACATTGACCCACA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTCACTTGACAGTATATTaGGCACCTCGCCAACAGAGA +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTHLTVY*APRQQR
Trigger: TCTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTG...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: FQAENADIHLINKDCATGCVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR GCA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCATTCGCTTCAGCCATTaGTTTGATGGAGAAGGGCAA +
Preference number: 4 (lower is better)
Translates to: FLAKHCIQSFTLQICVITIRFSH*FDGEGQ
Trigger: TTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAAT...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAATGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VTSQMQNLASLQGLQACQCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR GCA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAACTGACCTCTGTTTCTTaGATAAATGCCTTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LGSEVFQAENADIHLINKLTSVS*INAFSG
Trigger: ACCAGAAAAGGCATTTATGCAAGAAACAGAGGTCAG...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCCCTCTTTTCTCATGTTaGGTTGGCCAAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FLAKHCIQSFTLQICVITPLFSC*VGQEQK
Trigger: TTTCTGCTCTTGGCCAACCCAACATGAGAAAAGAGG...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGACTCGAAATCTTTTaGCATTGGTGTCAGATGAGT +
Preference number: 4 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVGLEIF*HWCQMS
Trigger: ACTCATCTGACACCAATGCCAAAAGATTTCGAGTCC...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCGCAGAGTTTCCACTTTaGACAAATCCAGCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSAEFPL*TNPAFS
Trigger: GGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCATCCTGGACTCCTCTGTaGAAAATGCGTAACAGAATG +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPSWTPL*KMRNRM
Trigger: CATTCTGTTACGCATTTTCCACAGAGGAGTCCAGGA...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTCTTTGCTTTGACCCCTaGGAACTGTTTTCACCAATG +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTLCFDP*ELFSPM
Trigger: CATTGGTGAAAACAGTTCTCAGGGGTCAAAGCAAAG...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGCTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR TCA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTCTATGGCAGAGAAATaGCAAAGGTTATTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHSMAEK*QRLLRG
Trigger: ACCTCTCAATAACCTTTGCCATTTCTCTGCCATAGA...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGGCCATAAACATCTaGACGGGTATGAATATGACA +
Preference number: 4 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHLAINI*TGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAA...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCAAGAATAGCTATCACTTaGCAGTATATTGAGCACCTC +
Preference number: 4 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPRIAIT*QYIEHL
Trigger: GAGGTGCTCAATATACTGTCAAGTGATAGCTATTCT...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR GCA 90 bp ATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGTGTTTCTTGCATAAATaGCTTTTCTGGTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: IQSFTLQICVITTCHPVKCFLHK*LFWFCN
Trigger: ATTGCAGAACCAGAAAAGGCATTTATGCAAGAAACA...CTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CCA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGAAATCTTTTGGCATTaGTGTCAGATGAGTCATATG +
Preference number: 4 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLEIFWH*CQMSHM
Trigger: CATATGACTCATCTGACACCAATGCCAAAAGATTTC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR TCA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCTGTGTCTACAAATTCTaGGCCTGTTTCAGATTCTTT +
Preference number: 4 (lower is better)
Translates to: FLAKHCIQSFTLQICVITCVYKF*ACFRFF
Trigger: AAAGAATCTGAAACAGGCTCAGAATTTGTAGACACA...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR TCA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTCTTCATCAAGGAGAATaGTCTTTGAATTACGGAGAA +
Preference number: 4 (lower is better)
Translates to: KKILLFFLLIMGKETLQTLHQGE*SLNYGE
Trigger: TTCTCCGTAATTCAAAGATCATTCTCCTTGATGAAG...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCTTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDSHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTSHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CACACATGGTCCTGTTGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: HTWSCCPGAHRSSVSPCPGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...TGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCAACAGGACCATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: SLSSSTEVNLACVSVPVRGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...GCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAATRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCCCCTATGGTGTGGTTTaGGTTGGGAGCCGGTCCAAT +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAPYGVV*VGSRSN
Trigger: ATTGGACCGGCTCCCAACCAAAACCACACCATAGGG...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp TGCCCTGGGGCCCACAGGTCATCCGTGAGCCCTTGTCCAACCAGAGACCCAGCCATCTGGGTCTTCTGGTaGGGTGATGTAAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: CPGAHRSSVSPCPTRDPAIWVFW*GDVRWG
Trigger: CCCCCATCTTACATCACCCAACCAGAAGACCCAGAT...GGCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGACCTGTGGGCCCCAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS TCA 90 bp AGGGACCCTGGCAGCAAGATGTCATCAGCTTGTCTTAAGGGCTCCTaGGTCCCAGATGCCAAACACTGGAGGCCAGGCCTCCCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RDPGSKMSSACLKGS*VPDAKHWRPGLPGQ
Trigger: CTGGCCAGGGAGGCCTGGCCTCCAGTGTTTGGCATCTGGGACTCAGGAGCCCTTAAGACAAGCTGATGACATCTTGCTGCCAGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGTGGAGCCCTGGGCTTTaGGCCTGGGGACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTEWSPGL*AWGHFH
Trigger: GTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCCA...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRARSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGCCCTGCATGGAGGAGGTGATGTGGGTGAACCAGGGTGACCGGCTGACATTCACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: RPCMEEVMWVNQGDRLTFTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...GAATGTCAGCCGGTCACCCTGGTTCACCCACATCACCTCCTCCATGCAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGGAACCCTTGGGGATTaGGGAGGTGAAGGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAGTLGD*GGEGQF
Trigger: AAACTGCCCTTCACCTCCCAAATCCCCAAGGGTTCC...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCAGTCTGCTGGAGGATTaGGTGAATGAGAATCACCGG +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAASLLED*VNENHR
Trigger: CCGGTGATTCTCATTCACCAAATCCTCCAGCAGACT...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCTCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CAA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDRCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTEQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCGGCACTGGGGTGGTTTaGGTGAAAACACATGAGGAA +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAGTGVV*VKTHEE
Trigger: TTCCTCATGTGTTTTCACCAAAACCACCCCAGTGCC...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS TCA 90 bp TGTCTACGGTCAGCCTTTGCCGGTAGCCTTTCACCATCACCGGCGTaGGCCAGGAAAATGTGGCGAAGGAGAGTAGCCCGGCATCATCCA +
Preference number: 5 (lower is better)
Translates to: CLRSAFAGSLSPSPA*ARKMWRRRVARHHP
Trigger: TGGATGATGCCGGGCTACTCTCCTTCGCCACATTTTCCTGGCTCACGCCGGTGATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CCA 90 bp GTGCTAACCTTGCACAGGGTCGCACTGGGATCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAAAGGATCTCCGCCGGCCTCGCTGGT +
Preference number: 5 (lower is better)
Translates to: VLTLHRVALGSWSSG*GHIFLQRISAGLAG
Trigger: ACCAGCGAGGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCCAGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCAAGGTTAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CCA 90 bp CCACCGGGTTGGGTGCTAACCTTGCACAGGGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCATATCTTTCTGCAAAGGATCTCCGCC +
Preference number: 5 (lower is better)
Translates to: PPGWVLTLHRVALGS*SSGWGHIFLQRISA
Trigger: GGCGGAGATCCTTTGCAGAAAGATATGACCCCAGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACCCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCATGGTGTGGTTTTGGTaGGGAGCCGGTCCAATGACC +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAMVWFW*GAGPMT
Trigger: GGTCATTGGACCGGCTCCCAACCAAAACCACACCAT...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGGTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PGSPPRTNPKPTKWGDMDSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...GTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGTATGGCAGTGGGGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: EYGSGDNFSPSSLRGWEGGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...CCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCCCCACTGCCATACTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNSHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: GQLQPQLTPWMGGAEDQGDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...GCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRAGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAAAGGACTGGAGGGGCTTTGTTGTGAAGGGGTTGGGAGCAGGGCCTGTGGAGCTTTCCCCTTGTGCCTaGATATCAGATCTGGAGCCC +
Preference number: 5 (lower is better)
Translates to: GKDWRGFVVKGLGAGPVELSPCA*ISDLEP
Trigger: GGGCTCCAGATCTGATATCAAGGCACAAGGGGAAAG...CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAAGCCCCTCCAGTCCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CAA 90 bp GGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTTTGAGGGGAAAGCTGAATTGAGCTaGGCCATAAACATCTCGCCA +
Preference number: 5 (lower is better)
Translates to: GDLPTAGPVLGTGPHFEGKAELS*AINISP
Trigger: TGGCGAGATGTTTATGGCCAAGCTCAATTCAGCTTT...CCCCTCAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS CCA 90 bp ATGCACAGGATGTTGGCCACGATGTCCATCAACACGCGTGTCCTCTaGAATTTCCACACCACGTGGCTCAGAGAGGCCTTCTCAGGACCC +
Preference number: 5 (lower is better)
Translates to: MHRMLATMSINTRVL*NFHTTWLREAFSGP
Trigger: GGGTCCTGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACATCCTGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CCA 90 bp GCTTATGCTGTGCAGAACCGATTTGAGGCTGTCACTTTGCTCCTCTaGGCCAGTGGCTCCCTTGGCTGGTGGACTCCTCTCACTGTATGC +
Preference number: 5 (lower is better)
Translates to: AYAVQNRFEAVTLLL*ASGSLGWWTPLTVC
Trigger: GCATACAGTGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: LIVSEGDLPTAGPVLGTGSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...ACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAAGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRALCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCGGTGCTCAGGAACTTTaGTGTCTACAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: QLQPQLTPWMGGAEDQGCGAQEL*CLQILS
Trigger: GCTCAGAATTTGTAGACACAAAAGTTCCTGAGCACC...GCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: NYGEELGPHKAADVPLLRVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTGCTCAAAGGGATCCAAGTaGTACCTTACTGTACCTACA +
Preference number: 5 (lower is better)
Translates to: FSPSSLRGWEGLKTRAACSKGSK*YLTVPT
Trigger: TGTAGGTACAGTAAGGTACAACTTGGATCCCTTTGA...GCAGGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS TCA 90 bp ATATCTTTCTGCAAAGGATCTCCGCCGGCCTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTCACCCACCATCCTGATGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ISFCKGSPPASLVQI*DKVGSFTHHPDGSL
Trigger: CAGGCTGCCATCAGGATGGTGGGTGAAGGACCCTACCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAGATCCTTTGCAGAAAGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000311303.7
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000533639.5
ENST00000534418.5
CDS GCA 90 bp ACCACAAAGCTTATGCTGTGCAGAACCGATTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCTCCCTTGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: TTKLMLCRTDLRLSL*SSGPVAPLAGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 90 bp TGCGTCTCAGGAGGATGTGGCAGGATAATGTCAGCACGATGGCTATaGTGGACACGATGGGGGCCAGGGCAGAGTTTCCACTTTGGACAA +
Preference number: 5 (lower is better)
Translates to: CVSGGCGRIMSARWL*WTRWGPGQSFHFGQ
Trigger: TTGTCCAAAGTGGAAACTCTGCCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCCTCCTGAGACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 90 bp ACACTAAATGCCACGGGTGCGGTGAGTTTGCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACGATGGCTATGGTGGACACGATGGGG +
Preference number: 5 (lower is better)
Translates to: TLNATGAVSLRLRRM*QDNVSTMAMVDTMG
Trigger: CCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCCTCCTGAGACGCAAACTCACCGCACCCGTGGCATTTAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GACAACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACG +
Preference number: 5 (lower is better)
Translates to: DNFSPSSLRGWEGLKTRAKAELS*AINIWT
Trigger: CGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTT...AGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000529084.5
CDS-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACTTCAGCCCCAGCTCACTCCGTGGATGGGAGGGGCTGAAGACCAGGGCTGCCTCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: NFSPSSLRGWEGLKTRAASETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...GGCAGCCCTGGTCTTCAGCCCCTCCCATCCACGGAGTGAGCTGGGGCTGAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: GEFGLRLCSRSHTHLEQSVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...GGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: ISRQDLYNLTSAASNIANRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGGGAACCCTTGGGGATTaGGGAGGTGAAGGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPGTLGD*GGEGQF
Trigger: AAACTGCCCTTCACCTCCCAAATCCCCAAGGGTTCC...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS TCA 90 bp TCTTCCCCTTTCTCACCACAAAGCTTATGCTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCTCTGGGCCAGTGGCTCCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: SSPFSPQSLCCAEPI*GCHFAPLGQWLPWL
Trigger: CAGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAAAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS TCA 90 bp GGCAGAGTAGCAGGGCCTTCCATCTGCTCTACAGCCAGACAGGCTTaGGTTCAAGTCTCCATCCTGCTACTCACTAGCCTGGGCATGTTA +
Preference number: 5 (lower is better)
Translates to: GRVAGPSICSTARQA*VQVSILLLTSLGML
Trigger: TAACATGCCCAGGCTAGTGAGTAGCAGGATGGAGACTTGAACTCAAGCCTGTCTGGCTGTAGAGCAGATGGAAGGCCCTGCTACTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS-3UTR CAA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGTGGAGCCCTGGGCTTTaGGCCTGGGGACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSWSPGL*AWGHFH
Trigger: GTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCCA...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACTCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp GTTCACCACCCAGAACCAACCCCAAGCCCACCAAGTGGGGTGACATGGACTGAGTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VHHPEPTPSPPSGVTWTECLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...CTCAGTCCATGTCACCCCACTTGGTGGGCTTGGGGTTGGTTCTGGGTGGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGATCTGGGTCTTCTGGTaGGGTGATGTAAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPIWVFW*GDVRWG
Trigger: CCCCCATCTTACATCACCCAACCAGAAGACCCAGAT...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSALCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGCTGTCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: GLRLCSRSHTHLEQSAQLSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSARCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: RVTNKATVKVRMFMRTSIRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: ISRQDLYNLTSAASNIANRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCATCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSSHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLSHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTTCACACATGGTCCTGTaGCCCTGGGGCCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: RVTNKATVKVRMFMRTSISHMVL*PWGPQV
Trigger: GACCTGTGGGCCCCAGGGCAACAGGACCATGTGTGA...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: SGFSARTSGLSNSITFPFRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTATTTGTTGTGAAGGGGTaGGGAGCAGGGCCTGTGGAG +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLFVVKG*GAGPVE
Trigger: CTCCACAGGCCCTGCTCCCAACCCCTTCACAACAAA...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS TCA 90 bp GTCCCAGATGCCAAACACTGGAGGCCAGGCCTCCCTGGCCAGGTTTaGGTAATCAGCGCGCATAGGAAATTGGTGCTAGAAGGTAATTTC +
Preference number: 5 (lower is better)
Translates to: VPDAKHWRPGLPGQV*VISAHRKLVLEGNF
Trigger: GAAATTACCTTCTAGCACCAATTTCCTATGCGCGCTGATTACTCAAACCTGGCCAGGGAGGCCTGGCCTCCAGTGTTTGGCATCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTCCTCTTTTCTCATGTaGGGTTGGCCAAGAGCAGAA +
Preference number: 5 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFSSFLM*GWPRAE
Trigger: TTCTGCTCTTGGCCAACCCAACATGAGAAAAGAGGA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCTGGAGCCCTGGGCTTTaGGCCTGGGGACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: VTNKATVKVRMFMRTSILWSPGL*AWGHFH
Trigger: GTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCCA...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: SRRMIFELRRRARATQSSGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: DIHLINKDCATGWLHQTKGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: PEQLHGGEFGLRLCSRSHAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...GTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATAGTCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: IVSEGDLPTAGPVLGTGPMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...GGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: DIHLINKDCATGWLHQTKTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGATCTGGGTCTTCTGGTaGGGTGATGTAAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGIWVFW*GDVRWG
Trigger: CCCCCATCTTACATCACCCAACCAGAAGACCCAGAT...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGACCCAGCCACCAGTaGCTGAAGGCAGCGCTGCCA +
Preference number: 5 (lower is better)
Translates to: SSRRMIFELRRRARATQSRPSHQ*LKAALP
Trigger: TGGCAGCGCTGCCTTCAGCAACTGGTGGCTGGGTCT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: DIHLINKDCATGWLHQTKVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: ISRQDLYNLTSAASNIANVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: EVNLACVSVPVRTHTWSSAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...ACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCAGCTCGTCCATATCCTaGGAAAAACGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: AERTAPPPEDSSYSSHRASSSIS*EKRFIS
Trigger: GCTAATGAACCGTTTTTCCAAGGATATGGACGAGCT...GGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp CCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PDCLPTLYVQVQAVENKGGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...CCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
ENST00000649885.1
CDS TCA 90 bp CATGAAAGATCCATGCCTGCTGTGAAACGTAGGCCAAAGTTCCATTaGCTGCCACCACCCCTTTCTGCAGCTGCATCTGTCCTAGGAGAG +
Preference number: 5 (lower is better)
Translates to: HERSMPAVKRRPKFH*LPPPLSAAASVLGE
Trigger: CTCTCCTAGGACAGATGCAGCTGCAGAAAGGGGTGGTGGCAGTCAATGGAACTTTGGCCTACGTTTCACAGCAGGCATGGATCTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS GCA 90 bp CTAGTCAGACCACATATGCCCTGTTGCAGAGAACCTCGGAACATATaGTCCTCTGCCCTGGGAATGAAGTGCCGATTCTATCCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LVRPHMPCCREPRNI*SSALGMKCRFYPLP
Trigger: GGGAAGAGGATAGAATCGGCACTTCATTCCCAGGGCAGAGGAGCATATGTTCCGAGGTTCTCTGCAACAGGGCATATGTGGTCTGACTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528693.5
CDS GCA 90 bp GGTTCCCTCTCACAGATGGTTCGGTCCTCTCCAACCAGCCATACTTaGCATTCCCAGAACATTCCACACCCTTCTGTTTTCTGTGGCTTG +
Preference number: 5 (lower is better)
Translates to: GSLSQMVRSSPTSHT*HSQNIPHPSVFCGL
Trigger: CAAGCCACAGAAAACAGAAGGGTGTGGAATGTTCTGGGAATGGCAAGTATGGCTGGTTGGAGAGGACCGAACCATCTGTGAGAGGGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CCA 90 bp GGATGTGGCAGGATAATGTCAGCACGATGGCTATGGTGGACACGATaGGGGCCAGGGCAGAGTTTCCACTTTGGACAAATCCAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: GCGRIMSARWLWWTR*GPGQSFHFGQIQLF
Trigger: AAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTATCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VFPEQLHGGEFGLRLCSRCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...ACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCTGAAGGTGATCTCCCCACGGCTGGGCCAGTCCTTGGGACAGGTCCCCACTCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: SLKVISPRLGQSLGQVPTPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...AGTGGGGACCTGTCCCAAGGACTGGCCCAGCCGTGGGGAGATCACCTTCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGGGGCCAGTGGCTCCCTaGGCTGGTGGACTCCTCTCA +
Preference number: 5 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQGPVAP*AGGLLS
Trigger: TGAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCC...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACTTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SRRMIFELRRRARATQSSFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCAAGCCCACCAAGTGGGGTGACATGGACTGAGTATGGCAGTGGGGACAACTTCTCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: PSPPSGVTWTEYGSGDNFSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...GAAGTTGTCCCCACTGCCATACTCAGTCCATGTCACCCCACTTGGTGGGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGGGGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: PTVCPLCMFKFRLSRTRGGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...CCCCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATTCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTCAGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: IWLASLFPFAHTLGAVRSDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...TGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCACCAGGGTGTCAGTCTaGGAGTCCATAGAGGCGGTG +
Preference number: 5 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLTRVSV*ESIEAV
Trigger: CACCGCCTCTATGGACTCCAAGACTGACACCCTGGT...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGCCTCTCTGTGTCATTACCACTaGTCACCCAGTCAAGATGGA +
Preference number: 5 (lower is better)
Translates to: ERTAPPPEDSSYSSHRASLCHYH*SPSQDG
Trigger: TCCATCTTGACTGGGTGACAAGTGGTAATGACACAG...AGAGGCTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGAAACTGCCTTTCCCCTaGTGCCTTGATATCAGATCT +
Preference number: 5 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEKLPFP*CLDIRS
Trigger: AGATCTGATATCAAGGCACAAGGGGAAAGGCAGTTT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS GCA 90 bp CTGTGGAAAATGCTTATCAAACACCGTGTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGTGAAGACGAAGCCTTTGGTGACGCC +
Preference number: 5 (lower is better)
Translates to: LWKMLIKHRVMQRGG*HQCGLGEDEAFGDA
Trigger: GGCGTCACCAAAGGCTTCGTCTTCACCAAGACCACACTGATGGCATCCTCCTCTCTGCATGACACGGTGTTTGATAAGCATTTTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR CAA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: LFFQQSRLSAHFVCSSSGVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...GCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGCTGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: EFGLRLCSRSHTHLEQSAAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...AGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGCGGAGAGGACAGCCCCTCCTCCTGAAGACTCCTCCTATTCATCTCACAGAGATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LRRGQPLLLKTPPIHLTEMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...CTCTGTGAGATGAATAGGAGGAGTCTTCAGGAGGAGGGGCTGTCCTCTCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTCTCTCTCAGCAGGGCTCTCCTTGAAGGCTTCCACCATTGCTGCATTGTAAAGTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LSLSRALLEGFHHCCIVKSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...CTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGCTTCGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: DGVLNQGVSLGVHRGGGFGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...GAAGCCACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTTTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGRCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCTCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: VTNKATVKVRMFMRTSILSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGATCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAACGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGCGGCTGGGCCAGTCCTaGGGACAGGTCCCCACTTTG +
Preference number: 5 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVRLGQS*GQVPTL
Trigger: CAAAGTGGGGACCTGTCCCAAGGACTGGCCCAGCCG...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTCAGATTCAGTTTCTCTaGTCCCACCCGCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGQIQFL*SHPPEV
Trigger: GACTTCAGGCGGGTGGGACAAGAGAAACTGAATCTG...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS GCA 90 bp CATATTCCCAAGATCTTCCCCTTTCTCACCACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTGTCACTTTGCTCCTCTGGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: HIPKIFPFLTTKLML*RTDLRLSLCSSGPV
Trigger: CACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAAAGGGGAAGATCTTGGGAATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: VFQAENADIHLINKDCATGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: FQAENADIHLINKDCATGASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGGACAGGTCCCCACTTTGAGGGGATGAGTGCATTCAGGAACACAGGTCGAAATGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: GTGPHFEGMSAFRNTGRNGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...ATTTCGACCTGTGTTCCTGAATGCACTCATCCCCTCAAAGTGGGGACCTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: VFQAENADIHLINKDCATTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...AGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTATCTGGGTCTTCTGGTaGGGTGATGTAAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPIWVFW*GDVRWG
Trigger: CCCCCATCTTACATCACCCAACCAGAAGACCCAGAT...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: SSSTEVNLACVSVPVRTHMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...GTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: NNPDCLPTLYVQVQAVENLCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...GTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: RVTNKATVKVRMFMRTSILCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...AATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRLCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGATCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: NYGEELGPHKAADVPLLRSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGAAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRRCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCAGGTGTTCAGGATCCTaGAACTGCAATCCTCGCAGG +
Preference number: 5 (lower is better)
Translates to: SRRMIFELRRRARATQSSRCSGS*NCNPRR
Trigger: CCTGCGAGGATTGCAGTTCAAGGATCCTGAACACCT...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTGAGAGGTGCTCAGGAACTTTaGTGTCTACAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: NYGEELGPHKAADVPLLRGAQEL*CLQILS
Trigger: GCTCAGAATTTGTAGACACAAAAGTTCCTGAGCACC...TCTCAGTAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: IKIVPLAGSTRRNKAIPNAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...GTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: QAENADIHLINKDCATGWGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: NLASLQGLQACQTQSPSHSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCCAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: LYNLTSAASNIANAESGFQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACAAACAGGAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: ARASHRCDSQRDPSCTNRSLLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCAGACT...CCTGTTTGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS-3UTR CAA 90 bp GCCAGAGCATCTCATCGGTGTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATCTACATAGTCTCCCCTaGGCTGACATGGCAGTGATA +
Preference number: 5 (lower is better)
Translates to: ARASHRCDSQRDPSCTCNLHSLP*ADMAVI
Trigger: TATCACTGCCATGTCAGCCAAGGGGAGACTATGTAG...ATTGCAGGTACAACTTGGATCCCTTTGAGAGTCACACCGATGAGATGCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS TCA 90 bp AACCGATTATACCAGCATCTTCCTCTCTCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTGCATTGTAAAGGTGTTCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: NRLYQHLPLSQQGSP*RLPPLLHCKGVQDP
Trigger: AGGATCCTGAACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGATGCTGGTATAATCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533185.1
CDS TCA 90 bp GAACGATTATACCAGCATCTTCCTCTCTCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTGCATTGTAAAGGTGTTCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: ERLYQHLPLSQQGSP*RLPPLLHCKGVQDP
Trigger: AGGATCCTGAACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGATGCTGGTATAATCGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTGGAGCCCTGGGCTTTaGGCCTGGGGACACTTTCAC +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSWSPGL*AWGHFH
Trigger: GTGAAAGTGTCCCCAGGCCAAAAGCCCAGGGCTCCA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGGTTGGGTGCTAACCTaGCACAGGGTCGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLGWVLT*HRVALG
Trigger: TCCCAGTGCGACCCTGTGCAAGGTTAGCACCCAACC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTAAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACG +
Preference number: 5 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGKAELS*AINIWT
Trigger: CGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTT...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp CTAACGATGACTTTCCGGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACG +
Preference number: 5 (lower is better)
Translates to: LTMTFRNLFFQQSRLSAHKAELS*AINIWT
Trigger: CGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTT...GTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp TCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCTGACGTTCCCCTACTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: SLNYGEELGPHKAADVPLLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...TAGGGGAACGTCAGCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LPTIPTVCPLCMFKFRLSCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...CGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGG +
Preference number: 5 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQTGAVS*RLRRMW
Trigger: CCACATCCTCCTGAGACGCAAACTCACCGCACCCGT...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGGAGCAGTCCGATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: VNLACVSVPVRTHTWSSPMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...CGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTTGATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: LHGGEFGLRLCSRSHTHLMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...CAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAGGAGAAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GGETQGHQQGHSEGKDVHGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...ATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTTCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAATTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LGSEVFQAENADIHLINKFEAVT*LLWASG
Trigger: GCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAA...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACGTCATCCGTGAGCCCTaGTCCAACCAGAGACCCAGC +
Preference number: 5 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHVIREP*SNQRPS
Trigger: GCTGGGTCTCTGGTTGGACAAGGGCTCACGGATGAC...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: LYNLTSAASNIANAESGFVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...GAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVRSHTH*EQSAQL
Trigger: CAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACG...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: QAENADIHLINKDCATGWGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTTCGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: QRKPPESTVKVEEVTGVFARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...GAAAACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ACGCCAAACACCAGCATGAACACCATGCTTGCAGTGTACACCCACTGGTACACAAGCGCGCATAGGAAATaGGTGCTAGAAGGTAATTTC +
Preference number: 5 (lower is better)
Translates to: TPNTSMNTMLAVYTHWYTSAHRK*VLEGNF
Trigger: GAAATTACCTTCTAGCACCAATTTCCTATGCGCGCT...TGTGTACCAGTGGGTGTACACTGCAAGCATGGTGTTCATGCTGGTGTTTGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACCCGCTCCCCAATCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: DIHLINKDCATGWLHQTKPAPQS*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGATTGGGGAGCGGG...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp CCTCATGACCTAATTAATCACCTCCTAAAGGCCCTACCTCTATACTGTCACACTGGGTGGGAGAGGGGTTaGCTAAGATGGTTTCGTGTC +
Preference number: 5 (lower is better)
Translates to: PHDLINHLLKALPLYCHTGWERG*LRWFRV
Trigger: GACACGAAACCATCTTAGCAAACCCCTCTCCCACCC...AGTGTGACAGTATAGAGGTAGGGCCTTTAGGAGGTGATTAATTAGGTCATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS TCA 90 bp GAGCTTGGCCATAAACATCTGGACGGGTATGAATATGACATACACTaGTATCCCGATGAGAGCTGTGGGCCCCAGAATGAAAAAGGCGTA +
Preference number: 5 (lower is better)
Translates to: ELGHKHLDGYEYDIH*YPDESCGPQNEKGV
Trigger: TACGCCTTTTTCATTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGTATGTCATATTCATACCCGTCCAGATGTTTATGGCCAAGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS TCA 90 bp AAACGATTATACCAGCATCTTCCTCTCTCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTGCATTGTAAAGGTGTTCAGGATCCT +
Preference number: 5 (lower is better)
Translates to: KRLYQHLPLSQQGSP*RLPPLLHCKGVQDP
Trigger: AGGATCCTGAACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGATGCTGGTATAATCGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGCATCATCCACCGGGTaGGGTGCTAACCTTGCACAG +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLASSTG*GANLAQ
Trigger: CTGTGCAAGGTTAGCACCCAACCCGGTGGATGATGC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACG +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHKAELS*AINIWT
Trigger: CGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp GAAATGTATTCCCTGAGCAGCTCCACGGAGGTGAATTTGGCTTGCGTCTCTGTTCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: EMYSLSSSTEVNLACVSVLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...AACAGAGACGCAAGCCAAATTCACCTCCGTGGAGCTGCTCAGGGAATACATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCAGTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: HQQGHSEGKDVHEDIHSQCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...CTGAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: SGFSARTSGLSNSITFPFSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HRKCRIWLLCKDFRLVKLGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...GAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: FQAENADIHLINKDCATGLCRTD*RLSLCS
Trigger: GGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAG...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCTTTGATGGTGTTCTGAACCAGGGTGTCAGTCTTGGAGTCCATAGAGGCGGTTCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: IFDGVLNQGVSLGVHRGGSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...ACCGCCTCTATGGACTCCAAGACTGACACCCTGGTTCAGAACACCATCAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATGGTGCTCAGGAACTTTaGTGTCTACAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDGAQEL*CLQILS
Trigger: GCTCAGAATTTGTAGACACAAAAGTTCCTGAGCACC...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp AAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTAACGATAGCTCGTCCATATCCTaGGAAAAACGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: KIVPLAGSTRRNKAIPNDSSSIS*EKRFIS
Trigger: GCTAATGAACCGTTTTTCCAAGGATATGGACGAGCT...ATCGTTAGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CCTCATGACCTAATTAATCACCTCCTAAAGGCCCTACCTCTATACTGTCACACTGGGATCACAGTCAGCTaGGTTCTGAGGTCTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PHDLINHLLKALPLYCHTGITVS*VLRSSK
Trigger: CTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCC...AGTGTGACAGTATAGAGGTAGGGCCTTTAGGAGGTGATTAATTAGGTCATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: SRRMIFELRRRARATQSSARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: VTNKATVKVRMFMRTSILARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGGGCACTGGGGTGGTTTaGGTGAAAACACATGAGGAA +
Preference number: 5 (lower is better)
Translates to: QAENADIHLINKDCATGWGTGVV*VKTHEE
Trigger: TTCCTCATGTGTTTTCACCAAAACCACCCCAGTGCC...CCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: SGFSARTSGLSNSITFPFSLLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCAGACT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: SSRRMIFELRRRARATQSSLLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCAGACT...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTAGCTGGAATGGCACTTaGCTAAATTTGGCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVSWNGT*LNLAAL
Trigger: CAGGGCTGCCAAATTTAGCAAAGTGCCATTCCAGCT...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGGCGGCTTGGAAGCATaGCAGCTGGAATGGCACTTT +
Preference number: 5 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPGGLEA*QLEWHF
Trigger: AAAGTGCCATTCCAGCTGCAATGCTTCCAAGCCGCC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS-3UTR CAA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGTTCAACAGGAGGATTTaGGGGGAACACAATGTTCAG +
Preference number: 5 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQFNRRI*GEHNVQ
Trigger: CTGAACATTGTGTTCCCCCAAAATCCTCCTGTTGAA...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS TCA 90 bp GAGTATGTTTTCTCTCACATTTCCATGAAAGATCCATGCCTGCTGTaGAACGTAGGCCAAAGTTCCATTGACTGCCACCACCCCTTTCTG +
Preference number: 5 (lower is better)
Translates to: EYVFSHISMKDPCLL*NVGQSSIDCHHPFL
Trigger: CAGAAAGGGGTGGTGGCAGTCAATGGAACTTTGGCCTACGTTTCACAGCAGGCATGGATCTTTCATGGAAATGTGAGAGAAAACATACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 90 bp ATCCAAGTTGTACCTTACTGTACCTACAAACAGGACAGGATCCTGTaGGATCACAGTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: IQVVPYCTYKQDRIL*DHSQLGSEVFQAEN
Trigger: ATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGACTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGGTACAACTTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CCAGTCAAGATGGAAGTGAGTGGGGTTAAACGAGAAGAAAATTCTGCTCTTTTTGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: PVKMEVSGVKREENSALFVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...AAAAAGAGCAGAATTTTCTTCTCGTTTAACCCCACTCACTTCCATCTTGACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCAT +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSVYGQP*PVAFHH
Trigger: ATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGAC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: ISRQDLYNLTSAASNIANRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GACGAAACAAAGCCATTCCTAACGATGACTTTCCGGAACCTGTTCTTCCAACAAATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: DETKPFLTMTFRNLFFQQMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...TTGTTGGAAGAACAGGTTCCGGAAAGTCATCGTTAGGAATGGCTTTGTTTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAAGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: DIHLINKDCATGWLHQTKAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...TTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCTCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: SSRRMIFELRRRARATQSSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp AAACTCAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACAAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACG +
Preference number: 5 (lower is better)
Translates to: KLRVTNKATVKVRMFMRTKAELS*AINIWT
Trigger: CGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTT...TGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp TCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCAGCCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: SRRMIFELRRRARATQSSLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...GCTGCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHSETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVSETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AAGGATGTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: KDVHEDIHSQRKPPESTVGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...AACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAACATCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCAGCCGCCAGGACCTCTACAATCTGACTTCTGCTGCTAGTAACATCGCAAATGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: ISRQDLYNLTSAASNIANGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...ATTTGCGATGTTACTAGCAGCAGAAGTCAGATTGTAGAGGTCCTGGCGGCTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTAGAGGAGGTGACTGGAGTTTGTGTGCTGATACCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SQRKPPESTVKVEEVTGVCVLIP*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGGTATCAGCACACA...AACTCCAGTCACCTCCTCTACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGTGTGTGCTGATACCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: IPTVCPLCMFKFRLSRTRCVLIP*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGGTATCAGCACACA...CCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: FQAENADIHLINKDCATGGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAATCAGCAGGGCTCTCCTaGAAGGCTTCCACCATTGCT +
Preference number: 5 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQSAGLS*KASTIA
Trigger: AGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGA...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GTCAGCTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAGGTGCTCAGGAACTTTaGTGTCTACAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: VSLVLRSSKLRMQISTSSGAQEL*CLQILS
Trigger: GCTCAGAATTTGTAGACACAAAAGTTCCTGAGCACC...TGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACGTGAAGACGAAGCCTTaGGTGACGCCAAACACCAGC +
Preference number: 5 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHVKTKP*VTPNTS
Trigger: GCTGGTGTTTGGCGTCACCAAAGGCTTCGTCTTCAC...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp ATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAGCTCGTCCATATCCTaGGAAAAACGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: ISTSSIKIVPLAGSTRRNSSSIS*EKRFIS
Trigger: GCTAATGAACCGTTTTTCCAAGGATATGGACGAGCT...GTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTGACTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGAGCTCGTCCATATCCTaGGAAAAACGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: LTSAASNIANAESGFSARSSSIS*EKRFIS
Trigger: GCTAATGAACCGTTTTTCCAAGGATATGGACGAGCT...CCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCATCAAGGAGAATGATCTTTGAATTACGGAGAAGAGCTCGGGCCACACAAAGCGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: SSRRMIFELRRRARATQSDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...GCTTTGTGTGGCCCGAGCTCTTCTCCGTAATTCAAAGATCATTCTCCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACAGTTGAGAACTGTGTaGAGGCGGTGGGCGATGGTC +
Preference number: 5 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPQLRTV*RRWAMV
Trigger: GACCATCGCCCACCGCCTCAACACAGTTCTCAACTG...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp GTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAGCAAGGACTTCAGGCTaGTCAAACTCAATCACCTTC +
Preference number: 5 (lower is better)
Translates to: VTSQMQNLASLQGLQACQARTSG*SNSITF
Trigger: GAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGC...TTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
ENST00000649885.1
CDS TCA 90 bp TGGGATCAGGCAGCCTCTACTTTACCCAGATCAGTTCCTTTGCTTTaGCCCCTGAGAACTGTTTTCACCAATGAGCTTTCCACATTTGTA +
Preference number: 5 (lower is better)
Translates to: WDQAASTLPRSVPLL*PLRTVFTNELSTFV
Trigger: TACAAATGTGGAAAGCTCATTGGTGAAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGATCTGGGTAAAGTAGAGGCTGCCTGATCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS TCA 90 bp ACACTTTCACTCTATGGCAGAGAAATGGCAAAGGTTATTGAGAGGTaGGGATGTCTGATTGGGATCAGGCAGCCTCTACTTTACCCAGAT +
Preference number: 5 (lower is better)
Translates to: TLSLYGREMAKVIER*GCLIGIRQPLLYPD
Trigger: ATCTGGGTAAAGTAGAGGCTGCCTGATCCCAATCAGACATCCTCACCTCTCAATAACCTTTGCCATTTCTCTGCCATAGAGTGAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: FQAENADIHLINKDCATGSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp TCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGACGAAACAAAGCCATTCCTTCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: SIKIVPLAGSTRRNKAIPSETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...AGGAATGGCTTTGTTTCGTCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCTGGCTCCACCAGATCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: MQISTSSIKIVPLAGSTRSETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...TCTGGTGGAGCCAGCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTCAGGCTGTCGAGAACAAGGGCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: SRLSAHFVCSSSGCREQGPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...CCCTTGTTCTCGACAGCCTGAACTTGAACATACAAAGTGGGCAGACAGTCGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTCTGCTGCTAGTAACATCGCAAATGCAGAATCTGGCTTCTCTGCAAGGACTTGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: LLLLVTSQMQNLASLQGLGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...AAGTCCTTGCAGAGAAGCCAGATTCTGCATTTGCGATGTTACTAGCAGCAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAATCTGGGTCTTCTGGTaGGGTGATGTAAGATGGGGG +
Preference number: 5 (lower is better)
Translates to: YSVFHATNLCHYHLSPSQIWVFW*GDVRWG
Trigger: CCCCCATCTTACATCACCCAACCAGAAGACCCAGAT...TTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCAGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AATCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATGGTGCTCAGGAACTTTaGTGTCTACAAATTCTGAGC +
Preference number: 5 (lower is better)
Translates to: NLASLQGLQACQTQSPSHGAQEL*CLQILS
Trigger: GCTCAGAATTTGTAGACACAAAAGTTCCTGAGCACC...ATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp TTTTCTGGGAGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGCCATCAGTGTGGTCTaGGTGAAGACGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: FSGSFIILLYLQTGQDPVAISVV*VKTKPL
Trigger: CAAAGGCTTCGTCTTCACCAAGACCACACTGATGGC...CACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACTCCCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCGGAGGTGAATTTGGCTaGCGTCTCTGTTCCCGTTCG +
Preference number: 5 (lower is better)
Translates to: FLAKHCIQSFTLQICVITGGEFG*RLCSRS
Trigger: CGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp TTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: LVLRSSKLRMQISTSSIKSLLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCAGACT...CTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCAGATTCAGTTTCTCTaGTCCCACCCGCCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSQIQFL*SHPPEV
Trigger: GACTTCAGGCGGGTGGGACAAGAGAAACTGAATCTG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GGAACCTGTTCTTCCAACAATCCCGACTGTCTGCCCACTTTGTATGTTCAAGTTATCAGTTCCTTTGCTTaGACCCCTGAGAACTGTTTT +
Preference number: 5 (lower is better)
Translates to: GTCSSNNPDCLPTLYVQVISSFA*TPENCF
Trigger: AAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGAT...AACTTGAACATACAAAGTGGGCAGACAGTCGGGATTGTTGGAAGAACAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS-3UTR CAA 90 bp TTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCACTGGCAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: FQAENADIHLINKDCATGRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...GCCAGTGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAA +
Preference number: 5 (lower is better)
Translates to: FLAKHCIQSFTLQICVITSQDPP*LPLHPK
Trigger: TTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGA...GGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp TCTGGCTTCTCTGCAAGGACTTCAGGCTTGTCAAACTCAATCACCTTCCCATTTATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: SGFSARTSGLSNSITFPFMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...AAATGGGAAGGTGATTGAGTTTGACAAGCCTGAAGTCCTTGCAGAGAAGCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGATTGTGCCATCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: RSSKLRMQISTSSIKIVPSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...TGGCACAATCTTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTCCCAGGCATACATTTaGATCAGCCTGATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSSQAYI*ISLMQV
Trigger: GACCTGCATCAGGCTGATCAAAATGTATGCCTGGGA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp CAGGGTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: QGHQQGHSEGKDVHEDIHPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...ATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGACCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAGGTTCTGCAATTTCTTaGGGGTACTTTTCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LGSEVFQAENADIHLINKGSAIS*GYFSCW
Trigger: CCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACC...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCGGTTGTGAATCAGTTTaGCATAGCGCCCTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTGCESV*HSALSP
Trigger: AGGAGAGAGGGCGCTATGCAAAACTGATTCACAACC...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTTCCACGGAGGTGAATTaGGCTTGCGTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: KKILLFFLLIMGKETLQTSTEVN*ACVSVP
Trigger: GGGAACAGAGACGCAAGCCAAATTCACCTCCGTGGA...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGG +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLSLLED*VNENCR
Trigger: CCGACAGTTCTCATTCACCAAATCCTCCAGCAGACT...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GTGACTCTCAAAGGGATCCAAGTTGTACCTGCAATGAAGGAGAGGAGAGGACAGTGTGCTTTGAGGAATTaGGCTAAATGGCTACTATTA +
Preference number: 5 (lower is better)
Translates to: VTLKGIQVVPAMKERRGQCALRN*AKWLLL
Trigger: TAATAGTAGCCATTTAGCCAAATTCCTCAAAGCACA...CTGTCCTCTCCTCTCCTTCATTGCAGGTACAACTTGGATCCCTTTGAGAGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649885.1
CDS TCA 90 bp TACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACCAAAATTGCTGACCTTCGGAAAGCT +
Preference number: 5 (lower is better)
Translates to: YILISLMQVRNSFIV*TRLSVTKIADLRKA
Trigger: AGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: CIQSFTLQICVITTCHPVRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCTCACTTGACAGTATATaGAGCACCTCGCCAACAGAG +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSSLDSI*STSPTE
Trigger: CTCTGTTGGCGAGGTGCTCAATATACTGTCAAGTGA...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGTGTCTGTCACCAAAATaGCTGACCTTCGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSCLSPK*LTFGKL
Trigger: CAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGACA...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GTCACCAACAAGGCCACAGTGAAGGTAAGGATGTTCATGAGGACATCCATTCTCCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: VTNKATVKVRMFMRTSILPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...GAGAATGGATGTCCTCATGAACATCCTTACCTTCACTGTGGCCTTGTTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCTCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: CIQSFTLQICVITTCHPVSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...GACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAATCCTCCATTAACTCCTaGTGGGTTCCCTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: LGSEVFQAENADIHLINKSSINS*WVPFSQ
Trigger: TTGTGAAAAGGGAACCCACAAGGAGTTAATGGAGGA...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGAGCTCGTCCATATCCTaGGAAAAACGGTTCATTAGC +
Preference number: 5 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQSSSIS*EKRFIS
Trigger: GCTAATGAACCGTTTTTCCAAGGATATGGACGAGCT...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000534418.5
CDS-3UTR CAA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGGGCAACAAGGGTCTATaGGAGGAAATAGTATGGAAA +
Preference number: 5 (lower is better)
Translates to: QSFTLQICVITTCHPVKMGNKGL*EEIVWK
Trigger: TTTCCATACTATTTCCTCCAATAGACCCTTGTTGCC...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGAGGACTCGAAATCTTTaGGCATTGGTGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSRTRNL*ALVSDE
Trigger: CTCATCTGACACCAATGCCAAAAGATTTCGAGTCCT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTATGATGCACAGGATGTaGGCCACGATGTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: KKILLFFLLIMGKETLQTMMHRM*ATMSIN
Trigger: GTTGATGGACATCGTGGCCAACATCCTGTGCATCAT...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCGCCCAAAAGAAGACTTaGGTAAACTCGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLAQKKT*VNSVAK
Trigger: TTTTGCCACCGAGTTTACCAAAGTCTTCTTTTGGGC...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATC +
Preference number: 5 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTLRKAE*SLAINI
Trigger: GATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp GTTCATGAGGACATCCATTCTCAGCGCAAACCACCTGAGAGCACAGTTAAAGTACCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: VHEDIHSQRKPPESTVKVPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...TACTTTAACTGTGCTCTCAGGTGGTTTGCGCTGAGAATGGATGTCCTCATGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGGGCAGAGTTTCCACTTaGGACAAATCCAGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSGRVST*DKSSFF
Trigger: GAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGCC...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp CAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCCAGTCAAGATGATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: QSFTLQICVITTCHPVKMMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...CATCTTGACTGGGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp AGTTTCATTATCTTACTGTACCTACAAACAGGACAGGATCCTGTGGGATCACAGTGTGTGCTGATACCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: SFIILLYLQTGQDPVGSQCVLIP*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGGTATCAGCACACA...CTGTGATCCCACAGGATCCTGTCCTGTTTGTAGGTACAGTAAGATAATGAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000497206.6
ENST00000534418.5
CDS-3UTR CAA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAATGTGTGCTGATACCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGSEVFQAENADIHLINKCVLIP*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGGTATCAGCACACA...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp TTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACATCAGTTCCTTTGCTTaGACCCCTGAGAACTGTTTT +
Preference number: 5 (lower is better)
Translates to: FGQTLYSVFHATNLCHYHISSFA*TPENCF
Trigger: AAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGAT...GTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp ATACATTTTGATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTGAACTCGATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: IHFDQPDAGQKLIHCLNSMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...CGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGATCAAAATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp GCAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCTCAGAAACTCATTCATaGTCTGAACTCGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: AEFPLWTNPAFSSNFLSLSETHS*SELACL
Trigger: CAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGA...GAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp CTTGGTTCTGAGGTCTTCCAAGCTGAGAATGCAGATATCCACCTCATCAATAAAATGTCAAGGTGGCATTaGCTAAAAGCAAGACAGTAT +
Preference number: 5 (lower is better)
Translates to: LGSEVFQAENADIHLINKMSRWH*LKARQY
Trigger: ATACTGTCTTGCTTTTAGCAAATGCCACCTTGACAT...TTTATTGATGAGGTGGATATCTGCATTCTCAGCTTGGAAGACCTCAGAACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000497206.6
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS-3UTR CAA 90 bp AACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCACTTGTCACCTGTGTGCTGATACCTTaGGTGATCATACTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: NTVFSLSRYKSVSLPLVTCVLIP*VIILFS
Trigger: GGAGAAAAGTATGATCACCAAAGGTATCAGCACACA...GGTGACAAGTGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTGACAATGACAGGCCTTaGGATGAAGTACTGATGGAG +
Preference number: 5 (lower is better)
Translates to: KKILLFFLLIMGKETLQTDNDRP*DEVLME
Trigger: CTCCATCAGTACTTCATCCAAAGGCCTGTCATTGTC...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATA +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSLRKAE*SLAINI
Trigger: TATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp TTTTGGCCAAACACTGTATTCAGTCTTTCACGCTACAAATCTGTGTCATTACCAATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: FWPNTVFSLSRYKSVSLPMWVNV*KDTRFS
Trigger: TGAAAACCTAGTGTCCTTCAAGACATTGACCCACAT...TGGTAATGACACAGATTTGTAGCGTGAAAGACTGAATACAGTGTTTGGCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp CAGAGTTTCCACTTTGGACAAATCCAGCTTTTTCCAGTAATTTTCTTTCCCTCCAAAGCTGAATTGAGCTaGGCCATAAACATACTGATA +
Preference number: 5 (lower is better)
Translates to: QSFHFGQIQLFPVIFFPSKAELS*AINILI
Trigger: TATCAGTATGTTTATGGCCAAGCTCAATTCAGCTTT...GGAGGGAAAGAAAATTACTGGAAAAAGCTGGATTTGTCCAAAGTGGAAACTCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533639.5
CDS-3UTR CAA 90 bp AAGAAAATTCTGCTCTTTTTCCTTCTGATAATGGGCAAGGAAACCTTGCAAACTCCTCCTTCTTATATCTaGGATAGTGTTGGTAAAAGA +
Preference number: 5 (lower is better)
Translates to: KKILLFFLLIMGKETLQTPPSYI*DSVGKR
Trigger: TCTTTTACCAACACTATCCAAGATATAAGAAGGAGG...AGTTTGCAAGGTTTCCTTGCCCATTATCAGAAGGAAAAAGAGCAGAATTTTCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS GCA 72 bp GCTCCCCAATCTCAGTCAGGTCTCCATAGGGGAGGTTaGTCAGGTCCTTCTGGAGGCCACAGACGCGGACTG +
Preference number: 6 (lower is better)
Translates to: APQSQSGLHRGG*SGPSGGHRRGL
Trigger: CAGTCCGCGTCTGTGGCCTCCAGAAGGACCTGAGCAACCTCCCCTATGGAGACCTGACTGAGATTGGGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 72 bp TGTCGACAATGGGGGCAGGGTGTCTACGGTCAGCCTTaGCCGGTAGCCTTTCACCATCACCGGCGTGAGCCA +
Preference number: 6 (lower is better)
Translates to: CRQWGQGVYGQP*PVAFHHHRREP
Trigger: TGGCTCACGCCGGTGATGGTGAAAGGCTACCGGCAAAGGCTGACCGTAGACACCCTGCCCCCATTGTCGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 90 bp GGAGGTGAATTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTGTTGAAAAGGAGCGAGCAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: GGEFGLRLCSRSHTH*EQSAQLLKRSEQPQ
Trigger: CTGCGGCTGCTCGCTCCTTTTCAACAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAATTCACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526251.1
CDS CCA 72 bp GGAGGATGTGGCAGGATAATGTCAGCACGATGGCTATaGTGGACACGATGGGGGCCAGGGCAGAGTTTCCAC +
Preference number: 6 (lower is better)
Translates to: GGCGRIMSARWL*WTRWGPGQSFH
Trigger: GTGGAAACTCTGCCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 72 bp GTCTCAGGAGGATGTGGCAGGATAATGTCAGCACGATaGCTATGGTGGACACGATGGGGGCCAGGGCAGAGT +
Preference number: 6 (lower is better)
Translates to: VSGGCGRIMSAR*LWWTRWGPGQS
Trigger: ACTCTGCCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCCTCCTGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 72 bp GCCACGGGTGCGGTGAGTTTGCGTCTCAGGAGGATGTaGCAGGATAATGTCAGCACGATGGCTATGGTGGAC +
Preference number: 6 (lower is better)
Translates to: ATGAVSLRLRRM*QDNVSTMAMVD
Trigger: GTCCACCATAGCCATCGTGCTGACATTATCCTGCCACATCCTCCTGAGACGCAAACTCACCGCACCCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 72 bp ACCGGCCCTATGGCTGCCATGATGATGCACAGGATGTaGGCCACGATGTCCATCAACACGCGTGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: TGPMAAMMMHRM*ATMSINTRVLW
Trigger: CCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACATCCTGTGCATCATCATGGCAGCCATAGGGCCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS CAA 72 bp GTCGGCCCTATGGCTGCCATGATGATGCACAGGATGTaGGCCACGATGTCCATCAACACGCGTGTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: VGPMAAMMMHRM*ATMSINTRVLW
Trigger: CCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACATCCTGTGCATCATCATGGCAGCCATAGGGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 90 bp CACCACAAAGCTTATGCTGTGCAGAACCGATTTGAGGCTGTCACTTaGCTCCTCTGGGCCAGTGGCTCCCTTGGCTGGTGGACTCCTCTC +
Preference number: 6 (lower is better)
Translates to: HHKAYAVQNRFEAVT*LLWASGSLGWWTPL
Trigger: GAGAGGAGTCCACCAGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS TCA 72 bp TGCAAAGGATCTCCGCCGGCCTCGCTGGTCCAGATCTaGGATAAGGTAGGGTCCTTCACCCACCATCCTGAT +
Preference number: 6 (lower is better)
Translates to: CKGSPPASLVQI*DKVGSFTHHPD
Trigger: ATCAGGATGGTGGGTGAAGGACCCTACCTTATCTCAGATCTGGACCAGCGAGGCCGGCGGAGATCCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS TCA 72 bp GGCAGCAAGATGTCATCAGCTTGTCTTAAGGGCTCCTaGGTCCCAGATGCCAAACACTGGAGGCCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: GSKMSSACLKGS*VPDAKHWRPGL
Trigger: GAGGCCTGGCCTCCAGTGTTTGGCATCTGGGACTCAGGAGCCCTTAAGACAAGCTGATGACATCTTGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS GCA 72 bp TGGGATCATGGTCTTCAGGCTGGGGTCATATCTTTCTaGAAAGGATCTCCGCCGGCCTCGCTGGTCCAGATC +
Preference number: 6 (lower is better)
Translates to: WDHGLQAGVISF*KGSPPASLVQI
Trigger: GATCTGGACCAGCGAGGCCGGCGGAGATCCTTTGCAGAAAGATATGACCCCAGCCTGAAGACCATGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS GCA 72 bp CTTATGCTGTGCAGAACCGATTTGAGGCTGTCACTTTaGTCCTCTGGGCCAGTGGCTCCCTTGGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: LMLCRTDLRLSL*SSGPVAPLAGG
Trigger: TCCACCAGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 72 bp TTGCACAGGGTCGCACTGGGATCATGGTCTTCAGGCTaGGGTCATATCTTTCTGCAAAGGATCTCCGCCGGC +
Preference number: 6 (lower is better)
Translates to: LHRVALGSWSSG*GHIFLQRISAG
Trigger: GCCGGCGGAGATCCTTTGCAGAAAGATATGACCCCAGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS TCA 72 bp AGTGTGCAGTCGCAGGTCTGCAGAAGTCGCCTCTCCTaGACGCTTGGCTCAGGAAGAGGAAAACCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SVQSQVCRSRLS*TLGSGRGKPVS
Trigger: AGACACTGGTTTTCCTCTTCCTGAGCCAAGCGTTCAGGAGAGGCGACTTCTGCAGACCTGCGACTGCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528693.5
CDS TCA 72 bp AGGACCTCAGATTCAGTTTCTCTTGTCCCACCCGCCTaGAGTCCTCCTCTCCAACTGCCCCATTCAACTGCC +
Preference number: 6 (lower is better)
Translates to: RTSDSVSLVPPA*SPPLQLPHSTA
Trigger: GGCAGTTGAATGGGGCAGTTGGAGAGGAGGACTTCAGGCGGGTGGGACAAGAGAAACTGAATCTGAGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529084.5
CDS TCA 72 bp GCAGGGCCTTCCATCTGCTCTACAGCCAGACAGGCTTaGGTTCAAGTCTCCATCCTGCTACTCACTAGCCTG +
Preference number: 6 (lower is better)
Translates to: AGPSICSTARQA*VQVSILLLTSL
Trigger: CAGGCTAGTGAGTAGCAGGATGGAGACTTGAACTCAAGCCTGTCTGGCTGTAGAGCAGATGGAAGGCCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CCA 72 bp ATGTTGGCCACGATGTCCATCAACACGCGTGTCCTCTaGAATTTCCACACCACGTGGCTCAGAGAGGCCTTC +
Preference number: 6 (lower is better)
Translates to: MLATMSINTRVL*NFHTTWLREAF
Trigger: GAAGGCCTCTCTGAGCCACGTGGTGTGGAAATTCCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 72 bp TTTGGCTTGCGTCTCTGTTCCCGTTCGCACACACACTaGGAGCAGTCCGCTCAGCTGTTGAAAAGGAGCGAG +
Preference number: 6 (lower is better)
Translates to: FGLRLCSRSHTH*EQSAQLLKRSE
Trigger: CTCGCTCCTTTTCAACAGCTGAGCGGACTGCTCCAAGTGTGTGTGCGAACGGGAACAGAGACGCAAGCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526251.1
CDS TCA 72 bp TTCCCAGAGGTCCTCTCAGTCTGCTGGAGGATTTGGTaGATGAGAACTGTCGGCCCTATGGCTGCCATGATG +
Preference number: 6 (lower is better)
Translates to: FPEVLSVCWRIW*MRTVGPMAAMM
Trigger: CATCATGGCAGCCATAGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCAGACTGAGAGGACCTCTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CCA 72 bp TGGGTGCTAACCTTGCACAGGGTCGCACTGGGATCATaGTCTTCAGGCTGGGGTCATATCTTTCTGCAAAGG +
Preference number: 6 (lower is better)
Translates to: WVLTLHRVALGS*SSGWGHIFLQR
Trigger: CCTTTGCAGAAAGATATGACCCCAGCCTGAAGACCATGATCCCAGTGCGACCCTGTGCAAGGTTAGCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 72 bp CCACGTGGCTCAGAGAGGCCTTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAAGGACTCGAAATCTTT +
Preference number: 6 (lower is better)
Translates to: PRGSERPSQDPP*LPLHPKGLEIF
Trigger: AAAGATTTCGAGTCCTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGAAGGCCTCTCTGAGCCACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 72 bp GACTTTCCCAGAGGTCCTCTCAGTCTGCTGGAGGATTaGGTGAATGAGAATCACCGGCCCTATGGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: DFPRGPLSLLED*VNENHRPYGCH
Trigger: ATGGCAGCCATAGGGCCGGTGATTCTCATTCACCAAATCCTCCAGCAGACTGAGAGGACCTCTGGGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS CAA 72 bp GACTTTCCCAGAGGTCCTCTCAGTCTGCTGGAGGATTaGGTGAATGAGAACTGTCGGCCCTATGGCTGCCAT +
Preference number: 6 (lower is better)
Translates to: DFPRGPLSLLED*VNENCRPYGCH
Trigger: ATGGCAGCCATAGGGCCGACAGTTCTCATTCACCAAATCCTCCAGCAGACTGAGAGGACCTCTGGGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 90 bp ATGAGAATCACCGGCCCTATGGCTGCCATGATGATGCACAGGATGTaGGCCACGATGTCCATCAACACGCGTGTCCTCTGGAATTTCCAC +
Preference number: 6 (lower is better)
Translates to: MRITGPMAAMMMHRM*ATMSINTRVLWNFH
Trigger: GTGGAAATTCCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACATCCTGTGCATCATCATGGCAGCCATAGGGCCGGTGATTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS CAA 90 bp ATCTTCCCCTTTCTCACCACAAAGCTTATGCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCCTCTGGGCCAGTGGCTCCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: IFPFLTTKLMLCRTD*RLSLCSSGPVAPLA
Trigger: AGCCAAGGGAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAAAGGGGAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 90 bp ATGAGAACTGTCGGCCCTATGGCTGCCATGATGATGCACAGGATGTaGGCCACGATGTCCATCAACACGCGTGTCCTCTGGAATTTCCAC +
Preference number: 6 (lower is better)
Translates to: MRTVGPMAAMMMHRM*ATMSINTRVLWNFH
Trigger: GTGGAAATTCCAGAGGACACGCGTGTTGATGGACATCGTGGCCAACATCCTGTGCATCATCATGGCAGCCATAGGGCCGACAGTTCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS TCA 72 bp TTCTCACCACAAAGCTTATGCTGTGCAGAACCGATTTaGGGCTGTCACTTTGCTCCTCTGGGCCAGTGGCTC +
Preference number: 6 (lower is better)
Translates to: FSPQSLCCAEPI*GCHFAPLGQWL
Trigger: GAGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS GCA 72 bp GAGGATTTGGTGAATGAGAATCACCGGCCCTATGGCTaGCATGATGATGCACAGGATGTTGGCCACGATGTC +
Preference number: 6 (lower is better)
Translates to: EDLVNENHRPYG*HDDAQDVGHDV
Trigger: GACATCGTGGCCAACATCCTGTGCATCATCATGGCAGCCATAGGGCCGGTGATTCTCATTCACCAAATCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311303.7
CDS CCA 72 bp AGGATAATGTCAGCACGATGGCTATGGTGGACACGATaGGGGCCAGGGCAGAGTTTCCACTTTGGACAAATC +
Preference number: 6 (lower is better)
Translates to: RIMSARWLWWTR*GPGQSFHFGQI
Trigger: GATTTGTCCAAAGTGGAAACTCTGCCCTGGCCCCCATCGTGTCCACCATAGCCATCGTGCTGACATTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 72 bp ATGGCAATCACACTAAATGCCACGGGTGCGGTGAGTTaGCGTCTCAGGAGGATGTGGCAGGATAATGTCAGC +
Preference number: 6 (lower is better)
Translates to: MAITLNATGAVS*RLRRMWQDNVS
Trigger: GCTGACATTATCCTGCCACATCCTCCTGAGACGCAAACTCACCGCACCCGTGGCATTTAGTGTGATTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 90 bp ATTTCCACACCACGTGGCTCAGAGAGGCCTTCTCAGGACCCACCCTaGCTACCTCTTCATCCCAAAGGACTCGAAATCTTTTGGCATTGG +
Preference number: 6 (lower is better)
Translates to: ISTPRGSERPSQDPP*LPLHPKGLEIFWHW
Trigger: CCAATGCCAAAAGATTTCGAGTCCTTTGGGATGAAGAGGTAGCAAGGGTGGGTCCTGAGAAGGCCTCTCTGAGCCACGTGGTGTGGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 90 bp GGGTTCCCTCTCACAGATGGTTCGGTCCTCTCCAACCAGCCATACTaGCCATTCCCAGAACATTCCACACCCTTCTGTTTTCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: GFPLTDGSVLSNQPY*PFPEHSTPFCFLWL
Trigger: AAGCCACAGAAAACAGAAGGGTGTGGAATGTTCTGGGAATGGCAAGTATGGCTGGTTGGAGAGGACCGAACCATCTGTGAGAGGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS GCA 72 bp CCACATATGCCCTGTTGCAGAGAACCTCGGAACATATaGTCCTCTGCCCTGGGAATGAAGTGCCGATTCTAT +
Preference number: 6 (lower is better)
Translates to: PHMPCCREPRNI*SSALGMKCRFY
Trigger: ATAGAATCGGCACTTCATTCCCAGGGCAGAGGAGCATATGTTCCGAGGTTCTCTGCAACAGGGCATATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528693.5
CDS CAA 72 bp TTTCTCACCACAAAGCTTATGCTGTGCAGAACCGATTaGAGGCTGTCACTTTGCTCCTCTGGGCCAGTGGCT +
Preference number: 6 (lower is better)
Translates to: FLTTKLMLCRTD*RLSLCSSGPVA
Trigger: AGCCACTGGCCCAGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 90 bp ACTTGCCATTCCCAGAACATTCCACACCCTTCTGTTTTCTGTGGCTaGTCTGTTCTGATAGCAAATGAGGCCACTGGCAGAGTAGCAGGG +
Preference number: 6 (lower is better)
Translates to: TCHSQNIPHPSVFCG*SVLIANEATGRVAG
Trigger: CCCTGCTACTCTGCCAGTGGCCTCATTTGCTATCAGAACAGACAAGCCACAGAAAACAGAAGGGTGTGGAATGTTCTGGGAATGGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS TCA 72 bp TACCAGCATCTTCCTCTCTCTCAGCAGGGCTCTCCTTaGAGGCTTCCACCATTGCTGCATTGTAAAGGTGTT +
Preference number: 6 (lower is better)
Translates to: YQHLPLSQQGSP*RLPPLLHCKGV
Trigger: AACACCTTTACAATGCAGCAATGGTGGAAGCCTTCAAGGAGAGCCCTGCTGAGAGAGAGGAAGATGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311303.7
ENST00000533185.1
ENST00000534418.5
CDS GCA 72 bp CTCCTCTGTGGAAAATGCTTATCAAACACCGTGTCATaGAGAGAGGAGGATGCCATCAGTGTGGTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LLCGKCLSNTVS*REEDAISVVLV
Trigger: CACCAAGACCACACTGATGGCATCCTCCTCTCTGCATGACACGGTGTTTGATAAGCATTTTCCACAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS GCA 72 bp TCACAGATGGTTCGGTCCTCTCCAACCAGCCATACTTaGCATTCCCAGAACATTCCACACCCTTCTGTTTTC +
Preference number: 6 (lower is better)
Translates to: SQMVRSSPTSHT*HSQNIPHPSVF
Trigger: GAAAACAGAAGGGTGTGGAATGTTCTGGGAATGGCAAGTATGGCTGGTTGGAGAGGACCGAACCATCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CCA 72 bp ATTTTTCTGGGAGTTTCATTATCTGCTGACCCCAGCTaGGGCTGTAGCTCTTATAGGACAGGGTTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: IFLGVSLSADPS*GCSSYRTGFPL
Trigger: GAGAGGGAACCCTGTCCTATAAGAGCTACAGCCCCAGCTGGGGTCAGCAGATAATGAAACTCCCAGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CAA 72 bp CTCACAGATGGTTCGGTCCTCTCCAACCAGCCATACTaGCCATTCCCAGAACATTCCACACCCTTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: LTDGSVLSNQPY*PFPEHSTPFCF
Trigger: AAAACAGAAGGGTGTGGAATGTTCTGGGAATGGCAAGTATGGCTGGTTGGAGAGGACCGAACCATCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CAA 90 bp AGCTTGGCCATAAACATCTCGCCAACAGAGATGTGGGTCAATGTCTaGAAGGACACTAGGTTTTCAAAAACCAAGGTGGAGAGCGCCACC +
Preference number: 6 (lower is better)
Translates to: SLAINISPTEMWVNV*KDTRFSKTKVESAT
Trigger: GGTGGCGCTCTCCACCTTGGTTTTTGAAAACCTAGTGTCCTTCAAGACATTGACCCACATCTCTGTTGGCGAGATGTTTATGGCCAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS TCA 72 bp CCAAAGGACTCGAAATCTTTTGGCATTGGTGTCAGATaGGTCATATGTCGACAATGGGGGCAGGGTGTCTAC +
Preference number: 6 (lower is better)
Translates to: PKDSKSFGIGVR*VICRQWGQGVY
Trigger: GTAGACACCCTGCCCCCATTGTCGACATATGACTCATCTGACACCAATGCCAAAAGATTTCGAGTCCTTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000527640.1
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS GCA 72 bp ATGCTTATCAAACACCGTGTCATGCAGAGAGGAGGATaGCATCAGTGTGGTCTTGGTGAAGACGAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: MLIKHRVMQRGG*HQCGLGEDEAF
Trigger: AAAGGCTTCGTCTTCACCAAGACCACACTGATGGCATCCTCCTCTCTGCATGACACGGTGTTTGATAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529504.5
CDS GCA 72 bp AAGATCTTCCCCTTTCTCACCACAAAGCTTATGCTGTaGAGAACCGATTTGAGGCTGTCACTTTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: KIFPFLTTKLML*RTDLRLSLCSS
Trigger: AGAGGAGCAAAGTGACAGCCTCAAATCGGTTCTGCACAGCATAAGCTTTGTGGTGAGAAAGGGGAAGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CCA 72 bp TCTGGTTCTGCAATTTCTTTGGGGTACTTTTCCTGCTaGCTTCATGCTCCCATGTCAAGGTGGCATTTGCTA +
Preference number: 6 (lower is better)
Translates to: SGSAISLGYFSC*LHAPMSRWHLL
Trigger: TAGCAAATGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAAAAGTACCCCAAAGAAATTGCAGAACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 72 bp ACCAAAATTGCTGACCTTCGGAAAGCTGAATTGAGCTaGGCCATAAACATCTCGCCAACAGAGATGTGGGTC +
Preference number: 6 (lower is better)
Translates to: TKIADLRKAELS*AINISPTEMWV
Trigger: GACCCACATCTCTGTTGGCGAGATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAGGTCAGCAATTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS TCA 72 bp CATAAACATCTGGACGGGTATGAATATGACATACACTaGTATCCCGATGAGAGCTGTGGGCCCCAGAATGAA +
Preference number: 6 (lower is better)
Translates to: HKHLDGYEYDIH*YPDESCGPQNE
Trigger: TTCATTCTGGGGCCCACAGCTCTCATCGGGATATCAGTGTATGTCATATTCATACCCGTCCAGATGTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS CCA 72 bp TACTTTTCCTGCTGGCTTCATGCTCCCATGTCAAGGTaGCATTTGCTAAAAGCAAGACAGTATCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: YFSCWLHAPMSR*HLLKARQYLGL
Trigger: AAGACCCAGATACTGTCTTGCTTTTAGCAAATGCCACCTTGACATGGGAGCATGAAGCCAGCAGGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS CAA 72 bp TCTGTCACCAAAATTGCTGACCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATCTCGCCAACAGAGATG +
Preference number: 6 (lower is better)
Translates to: SVTKIADLRKAE*SLAINISPTEM
Trigger: CATCTCTGTTGGCGAGATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534418.5
CDS TCA 72 bp ATCAGCCTGATGCAGGTCAGAAACTCATTCATTGTCTaGACTCGCTTGTCTGTCACCAAAATTGCTGACCTT +
Preference number: 6 (lower is better)
Translates to: ISLMQVRNSFIV*TRLSVTKIADL
Trigger: AAGGTCAGCAATTTTGGTGACAGACAAGCGAGTTCAGACAATGAATGAGTTTCTGACCTGCATCAGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000533639.5
ENST00000534418.5
CDS CAA 72 bp TCTGTCACCAAAATTGCTGACCTTCGGAAAGCTGAATaGAGCTTGGCCATAAACATCTGGACGGGTATGAAT +
Preference number: 6 (lower is better)
Translates to: SVTKIADLRKAE*SLAINIWTGMN
Trigger: ATTCATACCCGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAGGTCAGCAATTTTGGTGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS TCA 72 bp CTACTTTACCCAGATCAGTTCCTTTGCTTTGACCCCTaGGAACTGTTTTCACCAATGAGCTTTCCACATTTG +
Preference number: 6 (lower is better)
Translates to: LLYPDQFLCFDP*ELFSPMSFPHL
Trigger: CAAATGTGGAAAGCTCATTGGTGAAAACAGTTCTCAGGGGTCAAAGCAAAGGAACTGATCTGGGTAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311303.7
ENST00000534418.5
CDS TCA 72 bp TTCTCCTTAGAGAGACATTCGCTTCAGCCATTGCTTTaGTGGAGAAGGGCAAGATTGCAATGGAAAACTTCA +
Preference number: 6 (lower is better)
Translates to: FSLERHSLQPLL*WRRARLQWKTS
Trigger: TGAAGTTTTCCATTGCAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAATGTCTCTCTAAGGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5
CDS TCA 72 bp GAGTACCAACCTCAGAGCATTGTAGTAAGGACCAAGTaGGATGATACATGTAGTGCTCTTGACTGGATCATT +
Preference number: 6 (lower is better)
Translates to: EYQPQSIVVRTK*DDTCSALDWII
Trigger: AATGATCCAGTCAAGAGCACTACATGTATCATCTCACTTGGTCCTTACTACAATGCTCTGAGGTTGGTACTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532355.1
CDS CAA 72 bp ACCAAAATTGCTGACCTTCGGAAAGCTGAATTGAGCTaGGCCATAAACATCTGGACGGGTATGAATATGACA +
Preference number: 6 (lower is better)
Translates to: TKIADLRKAELS*AINIWTGMNMT
Trigger: TGTCATATTCATACCCGTCCAGATGTTTATGGCCAAGCTCAATTCAGCTTTCCGAAGGTCAGCAATTTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
CDS CAA 90 bp ATTTTCTTCATTCTCCTTAGAGAGACATTCGCTTCAGCCATTGCTTaGATGGAGAAGGGCAAGATTGCAATGGAAAACTTCATTACATTA +
Preference number: 6 (lower is better)
Translates to: IFFILLRETFASAIA*MEKGKIAMENFITL
Trigger: TAATGTAATGAAGTTTTCCATTGCAATCTTGCCCTTCTCCATCAAAGCAATGGCTGAAGCGAATGTCTCTCTAAGGAGAATGAAGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000311303.7
ENST00000497206.6
ENST00000528693.5
ENST00000529084.5
ENST00000529504.5
ENST00000532494.5
ENST00000534418.5